Pregenerated sensors for LINC01801 (Homo sapiens)
Ensembl gene IDs: ENSG00000267767Ensembl transcript IDs: ENST00000587150.3, ENST00000590963.1, ENST00000654750.1, ENST00000657681.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCGGTGTCCTGAGCCCAGAGCTGCCTGCAGGCGGGCAGGAGTTGTaGGGGTGTTGGCATGATCTGGTGTCCTCTGTGGCGGCTGCCATG | + |
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Preference number: 5 (lower is better) Translates to: GGVLSPELPAGGQEL*GCWHDLVSSVAAAM Trigger: CATGGCAGCCGCCACAGAGGACACCAGATCATGCCAACACCCCCACAACTCCTGCCCGCCTGCAGGCAGCTCTGGGCTCAGGACACCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS CCA 90 bp | GGCGGTGTCCTGAGCCCAGAGCTGCCTGCAGGCGGGCAGGAGTTGTaGGGGTGTTGGCATGATCTGGTGTCCTCTGTGGCGGCATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GGVLSPELPAGGQEL*GCWHDLVSSVAACE Trigger: CTCACATGCCGCCACAGAGGACACCAGATCATGCCAACACCCCCACAACTCCTGCCCGCCTGCAGGCAGCTCTGGGCTCAGGACACCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657681.1 |
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| CDS TCA 90 bp | AGTAGGAGTCCGGCGGGTGAGGGCCCAAGGGACGCACCACCAACTTaGAGCCACCGTGATGCGAGCCTGTGGGTGAATGGCTCCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SRSPAGEGPRDAPPT*SHRDASLWVNGSRN Trigger: GTTTCTGGAGCCATTCACCCACAGGCTCGCATCACGGTGGCTTCAAGTTGGTGGTGCGTCCCTTGGGCCCTCACCCGCCGGACTCCTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654750.1 |
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| CDS GCA 90 bp | ATGTCCTCGCCTCCAAGGTTTGGAGAGCTGCGCTATAAAGGTTCTTaGAGGCGGTGTCCTGAGCCCAGAGCTGCCTGCAGGCGGGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: MSSPPRFGELRYKGS*RRCPEPRAACRRAG Trigger: TCCTGCCCGCCTGCAGGCAGCTCTGGGCTCAGGACACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGGCGAGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 90 bp | TGGGCACGGCAAGCACAGCCTCGTCTTTGGGGCACCCTCGGCACCTaGACAGGGATTCTTTGGGGACAGAAGCATGCAGCATCACCCTAT | + |
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Preference number: 5 (lower is better) Translates to: WARQAQPRLWGTLGT*TGILWGQKHAASPY Trigger: ATAGGGTGATGCTGCATGCTTCTGTCCCCAAAGAATCCCTGTGCAGGTGCCGAGGGTGCCCCAAAGACGAGGCTGTGCTTGCCGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 90 bp | CAGGGCGGGCACATAGAATGTCCTCGCCTCCAAGGTTTGGAGAGCTaGGCTATAAAGGTTCTTGCAGGCGGTGTCCTGAGCCCAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: QGGHIECPRLQGLES*AIKVLAGGVLSPEL Trigger: CAGCTCTGGGCTCAGGACACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGGCGAGGACATTCTATGTGCCCGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | CCCTGTGACTGCAAGTCTTCTCTTCTTGTGTCTGGTCAGAGCGCTTaGGGCCCATATGGCCTGGGCAAACCTGTTACTGCTGGAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: PCDCKSSLLVSGQSA*GPYGLGKPVTAGEA Trigger: GGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCAGTCACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000587150.3 |
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| CDS GCA 90 bp | TGGTCAGAGCGCTTGGGGCCCATATGGCCTGGGCAAACCTGTTACTaGTGGAGAAGCCTGCACAACAGAGAAGAAACATGTGCCCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: WSERLGPIWPGQTCY*WRSLHNREETCAPR Trigger: TCTTGGGGCACATGTTTCTTCTCTGTTGTGCAGGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | ACCTGTGACTGCAAGTCTTCTCTTCTTGTGTCTGGTCAGAGCGCTTaGGGCCCATATGGCCTGGGCAAACCTGTTACTGCTGGAGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: TCDCKSSLLVSGQSA*GPYGLGKPVTAGEA Trigger: GGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCAGTCACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | CTTCTCTTCTTGTGTCTGGTCAGAGCGCTTGGGGCCCATATGGCCTaGGCAAACCTGTTACTGCTGGAGAAGCCTGCACAACAGAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: LLFLCLVRALGAHMA*ANLLLLEKPAQQRR Trigger: TCTTCTCTGTTGTGCAGGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | CAGCCTCGTCTTTGGGGCACCCTCGGCACCTGCACAGGGATTCTTTaGGGACAGAAGCATGCAGCATCACCCTATTTGTTTTCTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: QPRLWGTLGTCTGIL*GQKHAASPYLFSSH Trigger: ATGAGAAGAAAACAAATAGGGTGATGCTGCATGCTTCTGTCCCCAAAGAATCCCTGTGCAGGTGCCGAGGGTGCCCCAAAGACGAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 90 bp | CACCACAAGCAGAGCACCCTGTTGCACCTTTCCAAGCACCTATGTTaGAGTAGCAGGGGACAACACACTACCTGTGACTGCAAGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: HHKQSTLLHLSKHLC*SSRGQHTTCDCKSS Trigger: AGAAGACTTGCAGTCACAGGTAGTGTGTTGTCCCCTGCTACTGCAACATAGGTGCTTGGAAAGGTGCAACAGGGTGCTCTGCTTGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | CACAGTCCCACACCTATGCTTACTCGCGAATACAGCCAGAGTGCCTaGGTTCCACAAGTGAGGATTCAGATGGCAAGTAGAGGGTACAGT | + |
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Preference number: 5 (lower is better) Translates to: HSPTPMLTREYSQSA*VPQVRIQMASRGYS Trigger: ACTGTACCCTCTACTTGCCATCTGAATCCTCACTTGTGGAACCCAGGCACTCTGGCTGTATTCGCGAGTAAGCATAGGTGTGGGACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | GTCAAACGCCTTTGGACCACTCAGCTTGAGCACATCTGTTTCTGTTaGAGGGGCTGGTGCCATATCTGTGACTGTAATGGGAGGAGATGG | + |
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Preference number: 5 (lower is better) Translates to: VKRLWTTQLEHICFC*RGWCHICDCNGRRW Trigger: CCATCTCCTCCCATTACAGTCACAGATATGGCACCAGCCCCTCCAACAGAAACAGATGTGCTCAAGCTGAGTGGTCCAAAGGCGTTTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587150.3 |
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| CDS GCA 90 bp | ATACAATCAGAGCATGTGAGGGCCATAAGTCCAGAGTATAGGCAGTaGAATGCCTGCAATGGGAGGAGATGGCACCATACCTGTAATGGG | + |
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Preference number: 5 (lower is better) Translates to: IQSEHVRAISPEYRQ*NACNGRRWHHTCNG Trigger: CCCATTACAGGTATGGTGCCATCTCCTCCCATTGCAGGCATTGCACTGCCTATACTCTGGACTTATGGCCCTCACATGCTCTGATTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | ATGTGCCCCAAGATACTTCTGTTCATGACTTCTGTCAAACGCCTTTaGACCACTCAGCTTGAGCACATCTGTTTCTGTTGGAGGGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MCPKILLFMTSVKRL*TTQLEHICFCWRGW Trigger: CCAGCCCCTCCAACAGAAACAGATGTGCTCAAGCTGAGTGGTCCAAAGGCGTTTGACAGAAGTCATGAACAGAAGTATCTTGGGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 90 bp | CTGGTGGCTGGAGCACACTTGTTGCAGTCAGATGGGAGAACATGTTaGAGAAGATACTTCCATTCTCACCTTCAATCAGAACACCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LVAGAHLLQSDGRTC*RRYFHSHLQSEHQG Trigger: CCCCTGGTGTTCTGATTGAAGGTGAGAATGGAAGTATCTTCTTCAACATGTTCTCCCATCTGACTGCAACAAGTGTGCTCCAGCCACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 90 bp | CTATGCTTACTCGCGAATACAGCCAGAGTGCCTGGGTTCCACAAGTaGGGATTCAGATGGCAAGTAGAGGGTACAGTACCATTCAAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LCLLANTARVPGFHK*GFRWQVEGTVPFKC Trigger: ACACTTGAATGGTACTGTACCCTCTACTTGCCATCTGAATCCTCACTTGTGGAACCCAGGCACTCTGGCTGTATTCGCGAGTAAGCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 90 bp | CATCATTCAGAGCAACTGGGACACTGGTGGCTGGAGCACACTTGTTaGAGTCAGATGGGAGAACATGTTGAAGAAGATACTTCCATTCTC | + |
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Preference number: 5 (lower is better) Translates to: HHSEQLGHWWLEHTC*SQMGEHVEEDTSIL Trigger: GAGAATGGAAGTATCTTCTTCAACATGTTCTCCCATCTGACTGCAACAAGTGTGCTCCAGCCACCAGTGTCCCAGTTGCTCTGAATGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 90 bp | CTGCACAACAGAGAAGAAACATGTGCCCCAAGATACTTCTGTTCATaGCTTCTGTCAAACGCCTTTGGACCACTCAGCTTGAGCACATCT | + |
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Preference number: 5 (lower is better) Translates to: LHNREETCAPRYFCS*LLSNAFGPLSLSTS Trigger: AGATGTGCTCAAGCTGAGTGGTCCAAAGGCGTTTGACAGAAGTCATGAACAGAAGTATCTTGGGGCACATGTTTCTTCTCTGTTGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 90 bp | AACCTGTTACTGCTGGAGAAGCCTGCACAACAGAGAAGAAACATGTaGCCCAAGATACTTCTGTTCATGACTTCTGTCAAACGCCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: NLLLLEKPAQQRRNM*PKILLFMTSVKRLW Trigger: CCAAAGGCGTTTGACAGAAGTCATGAACAGAAGTATCTTGGGGCACATGTTTCTTCTCTGTTGTGCAGGCTTCTCCAGCAGTAACAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 90 bp | TGCTGTCTCAGGAGAGGCCGCAGTGGAAGAAAATCCACATGTAAGTaGATCTGTGCAGTTCAGACCTGTGTTACACAAACTCTTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: CCLRRGRSGRKSTCK*ICAVQTCVTQTLSE Trigger: TTCTGAAAGAGTTTGTGTAACACAGGTCTGAACTGCACAGATCCACTTACATGTGGATTTTCTTCCACTGCGGCCTCTCCTGAGACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS TCA 90 bp | AGTGGAAGAAAATCCACATGTAAGTGGATCTGTGCAGTTCAGACCTaGTGTACATCTTATGTCCTCGTTCCTGGGAGAAGACAGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: SGRKSTCKWICAVQT*CTSYVLVPGRRQLT Trigger: TGTGAGCTGTCTTCTCCCAGGAACGAGGACATAAGATGTACATCAGGTCTGAACTGCACAGATCCACTTACATGTGGATTTTCTTCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657681.1 |
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| CDS CCA 90 bp | CAAAAAGTGATACCAGGTGAAAGATCTGTGATGAGAGAAGAAATGTaGATCCAGAGAGAAGGCACATCTGGACAGGAACTTTATGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: QKVIPGERSVMREEM*IQREGTSGQELYER Trigger: CCTCTCATAAAGTTCCTGTCCAGATGTGCCTTCTCTCTGGATCCACATTTCTTCTCTCATCACAGATCTTTCACCTGGTATCACTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000587150.3 ENST00000654750.1 |
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| CDS CCA 90 bp | GATCTGTGCAGTTCAGACCTGTGTTACACAAACTCTTTCAGAAAGTaGAGAAAGGGGCAACTTTTCGTAACTCATTCTATAAGGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: DLCSSDLCYTNSFRK*RKGQLFVTHSIRPV Trigger: TACTGGCCTTATAGAATGAGTTACGAAAAGTTGCCCCTTTCTCCACTTTCTGAAAGAGTTTGTGTAACACAGGTCTGAACTGCACAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS TCA 72 bp | GCCTGCAGGCGGGCAGGAGTTGTGGGGGTGTTGGCATaGTCTGGTGTCCTCTGTGGCGGCTGCCATGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ACRRAGVVGVLA*SGVLCGGCHVS Trigger: GCTCACATGGCAGCCGCCACAGAGGACACCAGATCATGCCAACACCCCCACAACTCCTGCCCGCCTGCAGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS CCA 72 bp | CAGGCGGGCAGGAGTTGTGGGGGTGTTGGCATGATCTaGTGTCCTCTGTGGCGGCTGCCATGTGAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: QAGRSCGGVGMI*CPLWRLPCELL Trigger: GAGCAGCTCACATGGCAGCCGCCACAGAGGACACCAGATCATGCCAACACCCCCACAACTCCTGCCCGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS CCA 72 bp | CTTCTGTGGTGGGCACGGCAAGCACAGCCTCGTCTTTaGGGCACCCTCGGCACCTGCACAGGGATTCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLWWARQAQPRL*GTLGTCTGILW Trigger: CCAAAGAATCCCTGTGCAGGTGCCGAGGGTGCCCCAAAGACGAGGCTGTGCTTGCCGTGCCCACCACAGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | CAGGCGGGCAGGAGTTGTGGGGGTGTTGGCATGATCTaGTGTCCTCTGTGGCGGCATGTGAGCTGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QAGRSCGGVGMI*CPLWRHVSCSS Trigger: AGAGGAGCAGCTCACATGCCGCCACAGAGGACACCAGATCATGCCAACACCCCCACAACTCCTGCCCGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657681.1 |
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| CDS TCA 72 bp | GGGCCCAAGGGACGCACCACCAACTTGAAGCCACCGTaGTGCGAGCCTGTGGGTGAATGGCTCCAGAAACTG | + |
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Preference number: 6 (lower is better) Translates to: GPKGRTTNLKPP*CEPVGEWLQKL Trigger: CAGTTTCTGGAGCCATTCACCCACAGGCTCGCATCACGGTGGCTTCAAGTTGGTGGTGCGTCCCTTGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654750.1 |
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| CDS GCA 72 bp | CCTCCAAGGTTTGGAGAGCTGCGCTATAAAGGTTCTTaGAGGCGGTGTCCTGAGCCCAGAGCTGCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPRFGELRYKGS*RRCPEPRAACR Trigger: CCTGCAGGCAGCTCTGGGCTCAGGACACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CAAGCACAGCCTCGTCTTTGGGGCACCCTCGGCACCTaGACAGGGATTCTTTGGGGACAGAAGCATGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QAQPRLWGTLGT*TGILWGQKHAA Trigger: TGCTGCATGCTTCTGTCCCCAAAGAATCCCTGTGCAGGTGCCGAGGGTGCCCCAAAGACGAGGCTGTGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 90 bp | AGGCCTTTCCAGGGCGGGCACATAGAATGTCCTCGCCTCCAAGGTTaGGAGAGCTGCGCTATAAAGGTTCTTGCAGGCGGTGTCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RPFQGGHIECPRLQG*ESCAIKVLAGGVLS Trigger: GCTCAGGACACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGGCGAGGACATTCTATGTGCCCGCCCTGGAAAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | TCCCGCTTCCCCCAGCCTAAACACCAGGGCCTAGACTaGAGTGACCTGAACAGGTTCCCACAATGTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SRFPQPKHQGLD*SDLNRFPQCGA Trigger: AGCCCCACATTGTGGGAACCTGTTCAGGTCACTTCAGTCTAGGCCCTGGTGTTTAGGCTGGGGGAAGCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654750.1 |
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| CDS CCA 72 bp | TTGTGTCTGGTCAGAGCGCTTGGGGCCCATATGGCCTaGGCAAACCTGTTACTGCTGGAGAAGCCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: LCLVRALGAHMA*ANLLLLEKPAQ Trigger: TTGTGCAGGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | TCTTCTTGTGTCTGGTCAGAGCGCTTGGGGCCCATATaGCCTGGGCAAACCTGTTACTGCTGGAGAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SSCVWSERLGPI*PGQTCYCWRSL Trigger: CAGGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | CAGGGCGGGCACATAGAATGTCCTCGCCTCCAAGGTTaGGAGAGCTGCGCTATAAAGGTTCTTGCAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: QGGHIECPRLQG*ESCAIKVLAGG Trigger: ACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGGCGAGGACATTCTATGTGCCCGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 90 bp | GTAGCAGGGGACAACACACTACCTGTGACTGCAAGTCTTCTCTTCTaGTGTCTGGTCAGAGCGCTTGGGGCCCATATGGCCTGGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VAGDNTLPVTASLLF*CLVRALGAHMAWAN Trigger: GTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCAGTCACAGGTAGTGTGTTGTCCCCTGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CACATAGAATGTCCTCGCCTCCAAGGTTTGGAGAGCTaGGCTATAAAGGTTCTTGCAGGCGGTGTCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HIECPRLQGLES*AIKVLAGGVLS Trigger: GCTCAGGACACCGCCTGCAAGAACCTTTATAGCGCAGCTCTCCAAACCTTGGAGGCGAGGACATTCTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CGCTTGGGGCCCATATGGCCTGGGCAAACCTGTTACTaGTGGAGAAGCCTGCACAACAGAGAAGAAACATGT | + |
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Preference number: 6 (lower is better) Translates to: RLGPIWPGQTCY*WRSLHNREETC Trigger: ACATGTTTCTTCTCTGTTGTGCAGGCTTCTCCAGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CAGAGCACCCTGTTGCACCTTTCCAAGCACCTATGTTaGAGTAGCAGGGGACAACACACTACCTGTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: QSTLLHLSKHLC*SSRGQHTTCDC Trigger: GCAGTCACAGGTAGTGTGTTGTCCCCTGCTACTGCAACATAGGTGCTTGGAAAGGTGCAACAGGGTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | CTTTGGGGCACCCTCGGCACCTGCACAGGGATTCTTTaGGGACAGAAGCATGCAGCATCACCCTATTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LWGTLGTCTGIL*GQKHAASPYLF Trigger: AAACAAATAGGGTGATGCTGCATGCTTCTGTCCCCAAAGAATCCCTGTGCAGGTGCCGAGGGTGCCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | TGCAAGTCTTCTCTTCTTGTGTCTGGTCAGAGCGCTTaGGGCCCATATGGCCTGGGCAAACCTGTTACTGCT | + |
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Preference number: 6 (lower is better) Translates to: CKSSLLVSGQSA*GPYGLGKPVTA Trigger: AGCAGTAACAGGTTTGCCCAGGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | GACAACACACTACCTGTGACTGCAAGTCTTCTCTTCTaGTGTCTGGTCAGAGCGCTTGGGGCCCATATGGCC | + |
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Preference number: 6 (lower is better) Translates to: DNTLPVTASLLF*CLVRALGAHMA Trigger: GGCCATATGGGCCCCAAGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCAGTCACAGGTAGTGTGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | CTCGCGAATACAGCCAGAGTGCCTGGGTTCCACAAGTaGGGATTCAGATGGCAAGTAGAGGGTACAGTACCA | + |
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Preference number: 6 (lower is better) Translates to: LANTARVPGFHK*GFRWQVEGTVP Trigger: TGGTACTGTACCCTCTACTTGCCATCTGAATCCTCACTTGTGGAACCCAGGCACTCTGGCTGTATTCGCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | TCCCACACCTATGCTTACTCGCGAATACAGCCAGAGTaGCTGGGTTCCACAAGTGAGGATTCAGATGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SHTYAYSRIQPE*LGSTSEDSDGK Trigger: CTTGCCATCTGAATCCTCACTTGTGGAACCCAGGCACTCTGGCTGTATTCGCGAGTAAGCATAGGTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | TGTTGCAGTAGCAGGGGACAACACACTACCTGTGACTaGAAGTCTTCTCTTCTTGTGTCTGGTCAGAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: CCSSRGQHTTCD*KSSLLVSGQSA Trigger: AGCGCTCTGACCAGACACAAGAAGAGAAGACTTGCAGTCACAGGTAGTGTGTTGTCCCCTGCTACTGCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CAGGTGACCACTGTTCCCCATGATTTGATCTTGTTCTaGTGGGAGCAGTTTCTGCTCCTTCTAGTTACGGCA | + |
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Preference number: 6 (lower is better) Translates to: QVTTVPHDLILF*WEQFLLLLVTA Trigger: TGCCGTAACTAGAAGGAGCAGAAACTGCTCCCAGCAGAACAAGATCAAATCATGGGGAACAGTGGTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | TTTGTCCTTCTAGCACAAACTGGAAGCCCAAGACCCTaGGGTGTTTGTGAATGTGTCCAAGGACTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FVLLAQTGSPRP*GVCECVQGLGF Trigger: GAACCCAAGTCCTTGGACACATTCACAAACACCCCAGGGTCTTGGGCTTCCAGTTTGTGCTAGAAGGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | ACACCTATGCTTACTCGCGAATACAGCCAGAGTGCCTaGGTTCCACAAGTGAGGATTCAGATGGCAAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: TPMLTREYSQSA*VPQVRIQMASR Trigger: TCTACTTGCCATCTGAATCCTCACTTGTGGAACCCAGGCACTCTGGCTGTATTCGCGAGTAAGCATAGGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | GTCCTCGTTCCTGGGAGAAGACAGCTCACAGACAGCTaGGTTTTTGGCTGCACATCCTACTTAGAAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VLVPGRRQLTDS*VFGCTSYLEEK Trigger: TTTCTCTTCTAAGTAGGATGTGCAGCCAAAAACTCAGCTGTCTGTGAGCTGTCTTCTCCCAGGAACGAGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | CTTCCTCTAGAAATGGCAGGTGACCACTGTTCCCCATaGTTTGATCTTGTTCTGCTGGGAGCAGTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LPLEMAGDHCSP*FDLVLLGAVSA Trigger: AGCAGAAACTGCTCCCAGCAGAACAAGATCAAATCATGGGGAACAGTGGTCACCTGCCATTTCTAGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | AAATATCTGTGCTTCAGGACCTTTTCCACCTGCTTTTaGTCAGGTCAAATGTGCTTCTGTGGTGGGCACGGC | + |
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Preference number: 6 (lower is better) Translates to: KYLCFRTFSTCF*SGQMCFCGGHG Trigger: GCCGTGCCCACCACAGAAGCACATTTGACCTGATCAAAAGCAGGTGGAAAAGGTCCTGAAGCACAGATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 90 bp | ACTGGTGGCTGGAGCACACTTGTTGCAGTCAGATGGGAGAACATGTaGAAGAAGATACTTCCATTCTCACCTTCAATCAGAACACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGGWSTLVAVRWENM*KKILPFSPSIRTPG Trigger: CCCTGGTGTTCTGATTGAAGGTGAGAATGGAAGTATCTTCTTCAACATGTTCTCCCATCTGACTGCAACAAGTGTGCTCCAGCCACCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | GATCCAGAGAGAAGGCACATCTGGACAGGAACTTTATaGGAGGCCTCTCTTCACCACACAATAATCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DPERRHIWTGTL*EASLHHTIILL Trigger: GAGCAAGATTATTGTGTGGTGAAGAGAGGCCTCTCATAAAGTTCCTGTCCAGATGTGCCTTCTCTCTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587150.3 ENST00000654750.1 |
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| CDS CCA 72 bp | TCCTGGGAGAAGACAGCTCACAGACAGCTGAGTTTTTaGCTGCACATCCTACTTAGAAGAGAAATGCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SWEKTAHRQLSF*LHILLRREMPD Trigger: ATCAGGCATTTCTCTTCTAAGTAGGATGTGCAGCCAAAAACTCAGCTGTCTGTGAGCTGTCTTCTCCCAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | AGGAGAGGCCGCAGTGGAAGAAAATCCACATGTAAGTaGATCTGTGCAGTTCAGACCTGTGTTACACAAACT | + |
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Preference number: 6 (lower is better) Translates to: RRGRSGRKSTCK*ICAVQTCVTQT Trigger: AGTTTGTGTAACACAGGTCTGAACTGCACAGATCCACTTACATGTGGATTTTCTTCCACTGCGGCCTCTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590963.1 |
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| CDS CAA 72 bp | AAATGGCAGGTGACCACTGTTCCCCATGATTTGATCTaGTTCTGCTGGGAGCAGTTTCTGCTCCTTCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: KWQVTTVPHDLI*FCWEQFLLLLV Trigger: AACTAGAAGGAGCAGAAACTGCTCCCAGCAGAACAAGATCAAATCATGGGGAACAGTGGTCACCTGCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | AGATGGCAAGTAGAGGGTACAGTACCATTCAAGTGTTaGGGTACCCTTCTCACCATCATTCAGAGCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: RWQVEGTVPFKC*GTLLTIIQSNW Trigger: CCAGTTGCTCTGAATGATGGTGAGAAGGGTACCCAAACACTTGAATGGTACTGTACCCTCTACTTGCCATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS TCA 72 bp | AGAGAAGAAACATGTGCCCCAAGATACTTCTGTTCATaGCTTCTGTCAAACGCCTTTGGACCACTCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: REETCAPRYFCS*LLSNAFGPLSL Trigger: CAAGCTGAGTGGTCCAAAGGCGTTTGACAGAAGTCATGAACAGAAGTATCTTGGGGCACATGTTTCTTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS GCA 72 bp | CTGCTGGAGAAGCCTGCACAACAGAGAAGAAACATGTaGCCCAAGATACTTCTGTTCATGACTTCTGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLEKPAQQRRNM*PKILLFMTSVK Trigger: TTTGACAGAAGTCATGAACAGAAGTATCTTGGGGCACATGTTTCTTCTCTGTTGTGCAGGCTTCTCCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CCA 72 bp | AAGATACTTCTGTTCATGACTTCTGTCAAACGCCTTTaGACCACTCAGCTTGAGCACATCTGTTTCTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: KILLFMTSVKRL*TTQLEHICFCW Trigger: CCAACAGAAACAGATGTGCTCAAGCTGAGTGGTCCAAAGGCGTTTGACAGAAGTCATGAACAGAAGTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | GATCATCATAAAGGTTTCATCCTTGTCATTTTCATGTaGAGTAGGCTGAGGAGGAGGAGGAGGATGAAAAGG | + |
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Preference number: 6 (lower is better) Translates to: DHHKGFILVIFM*SRLRRRRRMKR Trigger: CCTTTTCATCCTCCTCCTCCTCCTCAGCCTACTCAACATGAAAATGACAAGGATGAAACCTTTATGATGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | ATTCTTTGGGGACAGAAGCATGCAGCATCACCCTATTaGTTTTCTTCTCATGTAAGACTTAGGGTCCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ILWGQKHAASPY*FSSHVRLRVLS Trigger: ACTGAGGACCCTAAGTCTTACATGAGAAGAAAACAAATAGGGTGATGCTGCATGCTTCTGTCCCCAAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | TGGAGCACACTTGTTGCAGTCAGATGGGAGAACATGTaGAAGAAGATACTTCCATTCTCACCTTCAATCAGA | + |
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Preference number: 6 (lower is better) Translates to: WSTLVAVRWENM*KKILPFSPSIR Trigger: TCTGATTGAAGGTGAGAATGGAAGTATCTTCTTCAACATGTTCTCCCATCTGACTGCAACAAGTGTGCTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000587150.3 ENST00000590963.1 ENST00000657681.1 |
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| CDS CAA 72 bp | CTTGCTCATTTTCCATCAGGTAGCTCAGTTCCAATTTaGGAAGAAGATACCCCATTGAGGCCATCAGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LAHFPSGSSVPI*EEDTPLRPSVK Trigger: TTTCACTGATGGCCTCAATGGGGTATCTTCTTCCAAAATTGGAACTGAGCTACCTGATGGAAAATGAGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654750.1 |
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