Pregenerated sensors for LINC01762 (Homo sapiens)
Ensembl gene IDs: ENSG00000233154Ensembl transcript IDs: ENST00000423907.5, ENST00000430107.2, ENST00000430316.5, ENST00000434879.1, ENST00000437308.6, ENST00000443219.5, ENST00000668577.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCGAGACTCCATCAGAGCTTGCTTGTAAGTCCTCCCTGAACTGTTaGCTGCCCCGAAGGGACATCAGAGCCATGCTGATACAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: SETPSELACKSSLNC*LPRRDIRAMLIQPQ Trigger: CTGTGGCTGTATCAGCATGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGATGGAGTCTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443219.5 |
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| CDS GCA 90 bp | AGACTTCAAGTTCCAGAGCTTGCTTGTAAGTCCTCCCTGAACTGTTaGCTGCCCCGAAGGGACATCAGAGCCATGCTGATACAGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: RLQVPELACKSSLNC*LPRRDIRAMLIQPQ Trigger: CTGTGGCTGTATCAGCATGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGGAACTTGAAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000668577.1 |
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| CDS TCA 90 bp | ATCAGAGCCATGCTGATACAGCCACAGCACCAGTGCCATTGCAGATaGCCTCGTGTTTTATCTCATGCCCAGGCTCAATCAAACAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: IRAMLIQPQHQCHCR*PRVLSHAQAQSNRD Trigger: GTCTCTGTTTGATTGAGCCTGGGCATGAGATAAAACACGAGGTCATCTGCAATGGCACTGGTGCTGTGGCTGTATCAGCATGGCTCTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000443219.5 ENST00000668577.1 |
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| CDS GCA 90 bp | CGTCTCTTCATTTGTACAGGGGAGAATGATACTGTGCAGAGCTGCTaGTGTAAGGATTATCTAAGCAGGGCTGGTTACAAGCCTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: RLFICTGENDTVQSC*CKDYLSRAGYKPQR Trigger: CCTCTGAGGCTTGTAACCAGCCCTGCTTAGATAATCCTTACAGCAGCAGCTCTGCACAGTATCATTCTCCCCTGTACAAATGAAGAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430107.2 |
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| CDS GCA 90 bp | TTCCGTCTCTTCATTTGTACAGGGGAGAATGATACTGTGCAGAGCTaGTGCTGTAAGGATTATCTAAGCAGGGCTGGTTACAAGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: FRLFICTGENDTVQS*CCKDYLSRAGYKPQ Trigger: CTGAGGCTTGTAACCAGCCCTGCTTAGATAATCCTTACAGCAGCAGCTCTGCACAGTATCATTCTCCCCTGTACAAATGAAGAGACGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430107.2 |
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| CDS GCA 72 bp | CAGCAGACGGTGGAGGCCCCTGCTCGGCCCTGGACCTaGAGGCCTTCTTCCAACAACTGTCAGACCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: QQTVEAPARPWT*RPSSNNCQTPQ Trigger: CTGTGGGGTCTGACAGTTGTTGGAAGAAGGCCTGCAGGTCCAGGGCCGAGCAGGGGCCTCCACCGTCTGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434879.1 |
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| CDS CCA 72 bp | GTTCCTCAGCAGACGGTGGAGGCCCCTGCTCGGCCCTaGACCTGCAGGCCTTCTTCCAACAACTGTCAGACC | + |
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Preference number: 6 (lower is better) Translates to: VPQQTVEAPARP*TCRPSSNNCQT Trigger: GGTCTGACAGTTGTTGGAAGAAGGCCTGCAGGTCCAGGGCCGAGCAGGGGCCTCCACCGTCTGCTGAGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434879.1 |
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| CDS TCA 72 bp | ACTGTTGCCTGCCCCGAAGGGACATCAGAGCCATGCTaGTACAGCCACAGCACCAGTGCCATTGCAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: TVACPEGTSEPC*YSHSTSAIADD Trigger: GTCATCTGCAATGGCACTGGTGCTGTGGCTGTATCAGCATGGCTCTGATGTCCCTTCGGGGCAGGCAACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000443219.5 ENST00000668577.1 |
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| CDS TCA 72 bp | GCGAGACTCCATCAGAGCTTGCTTGTAAGTCCTCCCTaGACTGTTGCCTGCCCCGAAGGGACATCAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: ARLHQSLLVSPP*TVACPEGTSEP Trigger: TGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGATGGAGTCTCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443219.5 |
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| CDS TCA 72 bp | GACTTCAAGTTCCAGAGCTTGCTTGTAAGTCCTCCCTaGACTGTTGCCTGCCCCGAAGGGACATCAGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: DFKFQSLLVSPP*TVACPEGTSEP Trigger: TGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGGAACTTGAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000668577.1 |
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| CDS GCA 72 bp | GTTCCAGAGCTTGCTTGTAAGTCCTCCCTGAACTGTTaGCTGCCCCGAAGGGACATCAGAGCCATGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: VPELACKSSLNC*LPRRDIRAMLI Trigger: TATCAGCATGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000668577.1 |
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| CDS GCA 72 bp | CCATCAGAGCTTGCTTGTAAGTCCTCCCTGAACTGTTaGCTGCCCCGAAGGGACATCAGAGCCATGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: PSELACKSSLNC*LPRRDIRAMLI Trigger: TATCAGCATGGCTCTGATGTCCCTTCGGGGCAGGCAACAGTTCAGGGAGGACTTACAAGCAAGCTCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443219.5 |
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| CDS TCA 72 bp | ACCAAGCCTTTCGCCTTGTTTATGCCATCAGGCTCCTaGGTCTCAGCTTTCCCCGTGGGGCTAAAGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TKPFALFMPSGS*VSAFPVGLKSS Trigger: TGAAGACTTTAGCCCCACGGGGAAAGCTGAGACTCAGGAGCCTGATGGCATAAACAAGGCGAAAGGCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000430107.2 ENST00000437308.6 ENST00000668577.1 |
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| CDS GCA 72 bp | TTCTTCCCTGGAGACACTGGAAGGACAGAGAGCTGCTaGAGTATCCCCACAGCACCAGCTGACATGGTATTT | + |
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Preference number: 6 (lower is better) Translates to: FFPGDTGRTESC*SIPTAPADMVF Trigger: AAATACCATGTCAGCTGGTGCTGTGGGGATACTGCAGCAGCTCTCTGTCCTTCCAGTGTCTCCAGGGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423907.5 |
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| CDS CAA 90 bp | AAGGGACATCAGAGCCATGCTGATACAGCCACAGCACCAGTGCCATaGCAGATGACCTCGTGTTTTATCTCATGCCCAGGCTCAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: KGHQSHADTATAPVP*QMTSCFISCPGSIK Trigger: TTTGATTGAGCCTGGGCATGAGATAAAACACGAGGTCATCTGCAATGGCACTGGTGCTGTGGCTGTATCAGCATGGCTCTGATGTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000443219.5 ENST00000668577.1 |
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| CDS TCA 72 bp | ATGCTGATACAGCCACAGCACCAGTGCCATTGCAGATaGCCTCGTGTTTTATCTCATGCCCAGGCTCAATCA | + |
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Preference number: 6 (lower is better) Translates to: MLIQPQHQCHCR*PRVLSHAQAQS Trigger: TGATTGAGCCTGGGCATGAGATAAAACACGAGGTCATCTGCAATGGCACTGGTGCTGTGGCTGTATCAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000430316.5 ENST00000434879.1 ENST00000437308.6 ENST00000443219.5 ENST00000668577.1 |
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| CDS TCA 72 bp | ATCCTGGAGTGGTTCAAGTGCTGCAAGGGTGTCGTGTaGGAATTCGAGCTTCCGTCTCTTCATTTGTACAGG | + |
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Preference number: 6 (lower is better) Translates to: ILEWFKCCKGVV*EFELPSLHLYR Trigger: CCTGTACAAATGAAGAGACGGAAGCTCGAATTCTCACACGACACCCTTGCAGCACTTGAACCACTCCAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430107.2 |
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| CDS TCA 72 bp | GGAGATGTGCTCCTCTTATTGCTGAGACTGGATGCTTaGAGCGGTAAGCACTGTTCACTTGAGAGGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: GDVLLLLLRLDA*SGKHCSLERKM Trigger: CATCTTCCTCTCAAGTGAACAGTGCTTACCGCTTCAAGCATCCAGTCTCAGCAATAAGAGGAGCACATCTCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423907.5 |
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| CDS GCA 72 bp | CAAGAGCACAAACAGGGAGCCATGGAGGACTGTTGTTaGCGAAGTAAGTTTTCAGCTTCCAAAAACAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QEHKQGAMEDCC*RSKFSASKNKS Trigger: AGACTTGTTTTTGGAAGCTGAAAACTTACTTCGGCAACAACAGTCCTCCATGGCTCCCTGTTTGTGCTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000430107.2 ENST00000437308.6 ENST00000668577.1 |
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| CDS GCA 72 bp | ATTTGTACAGGGGAGAATGATACTGTGCAGAGCTGCTaGTGTAAGGATTATCTAAGCAGGGCTGGTTACAAG | + |
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Preference number: 6 (lower is better) Translates to: ICTGENDTVQSC*CKDYLSRAGYK Trigger: CTTGTAACCAGCCCTGCTTAGATAATCCTTACAGCAGCAGCTCTGCACAGTATCATTCTCCCCTGTACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430107.2 |
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| CDS CAA 72 bp | TTGGTGTCCAGCCAAGGCCATGAAGTCCCACTTTGCTaGTCTTTCATTATAAATTTGGAGATGTGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LVSSQGHEVPLC*SFIINLEMCSS Trigger: AGAGGAGCACATCTCCAAATTTATAATGAAAGACAAGCAAAGTGGGACTTCATGGCCTTGGCTGGACACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423907.5 |
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