Pregenerated sensors for LINC01757 (Homo sapiens)
Ensembl gene IDs: ENSG00000228105Ensembl transcript IDs: ENST00000435552.1, ENST00000659784.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTTTCCAGGTGCTGCCATTTTGCTAAGAGTTTAACTTCCGCTTCCTaGTTAGCAGTTGGGAATGACAATTTAAACTTCTGTCTGTTATGG | + |
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Preference number: 5 (lower is better) Translates to: LSRCCHFAKSLTSAS*LAVGNDNLNFCLLW Trigger: CCATAACAGACAGAAGTTTAAATTGTCATTCCCAACTGCTAATCAGGAAGCGGAAGTTAAACTCTTAGCAAAATGGCAGCACCTGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659784.1 |
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| CDS CCA 72 bp | CCGAGGGTCGGGCTGGCCTCTCCCCACCCACGAACATaGCCGTCGAGGTGGGCGAGGGGAGGCGGCAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: PRVGLASPHPRT*PSRWARGGGSG Trigger: TCCGCTGCCGCCTCCCCTCGCCCACCTCGACGGCCATGTTCGTGGGTGGGGAGAGGCCAGCCCGACCCTCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000435552.1 |
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| CDS TCA 72 bp | TCGAGGATGGTGGTAGTCTCATGGCAGCAAGTAGGGTaGTCAGCCATGCTGCTTTGCATGGGACTATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRMVVVSWQQVG*SAMLLCMGLSW Trigger: CCAGGATAGTCCCATGCAAAGCAGCATGGCTGATCACCCTACTTGCTGCCATGAGACTACCACCATCCTCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000435552.1 ENST00000659784.1 |
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| CDS CCA 72 bp | TGGATAAGTCACATGCTGATGGGGCTGGATGTTGACTaGGTCACTCTCTCCTTGGGATCTATCATCCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: WISHMLMGLDVD*VTLSLGSIILE Trigger: CTCGAGGATGATAGATCCCAAGGAGAGAGTGACCCAGTCAACATCCAGCCCCATCAGCATGTGACTTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435552.1 ENST00000659784.1 |
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| CDS TCA 72 bp | TCACCTGAATTAACTCATGCATTTGCTATTATCTGGTaGCTGGACTGGGGCTGGATAAGTCACATGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: SPELTHAFAIIW*LDWGWISHMLM Trigger: CATCAGCATGTGACTTATCCAGCCCCAGTCCAGTCACCAGATAATAGCAAATGCATGAGTTAATTCAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435552.1 ENST00000659784.1 |
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