Pregenerated sensors for LINC01698 (Homo sapiens)
Ensembl gene IDs: ENSG00000231648Ensembl transcript IDs: ENST00000443636.1, ENST00000447257.1, ENST00000655463.1, ENST00000657739.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCAGTGCACACCAAAATGAGGCATCTTGTCCATATGCAACTATGTaGGAAGCGGCAGGTCTGATGGCAGAGATAGATGAGACAGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PSAHQNEASCPYATM*EAAGLMAEIDETGV Trigger: GACCCCTGTCTCATCTATCTCTGCCATCAGACCTGCCGCTTCTCACATAGTTGCATATGGACAAGATGCCTCATTTTGGTGTGCACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS GCA 90 bp | GCAGCCACCTCTGATAGATCAGACTTTCACAGCTTTGAGGACCCCTaGCTTCTAGTCAAAACCCTGATGGCTTCTTCAAATCTCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: AATSDRSDFHSFEDP*LLVKTLMASSNLSP Trigger: GGGGGAGAGATTTGAAGAAGCCATCAGGGTTTTGACTAGAAGGCAGGGGTCCTCAAAGCTGTGAAAGTCTGATCTATCAGAGGTGGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000447257.1 ENST00000657739.1 |
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| CDS CCA 90 bp | CAGAGGCAGAGGATGAACATTCCTGTAGGGGTTCCCCTCTCTTGCTaGTCATGGAAATGCAAGGTGGACATTGAGATTCCCTCGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: QRQRMNIPVGVPLSC*SWKCKVDIEIPSVS Trigger: TGAAACCGAGGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGGGGAACCCCTACAGGAATGTTCATCCTCTGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS CCA 90 bp | GTAGAAGGTAGCAAATGGAGTAAGTCAGTCCAGAAGCTGGAGCTTTaGGTATCTCCTGTTCACCCACAGTGCTATCTTCTGCAGCAAGCC | + |
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Preference number: 5 (lower is better) Translates to: VEGSKWSKSVQKLEL*VSPVHPQCYLLQQA Trigger: GGCTTGCTGCAGAAGATAGCACTGTGGGTGAACAGGAGATACCCAAAGCTCCAGCTTCTGGACTGACTTACTCCATTTGCTACCTTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443636.1 |
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| CDS TCA 90 bp | GCAATGGTGGTGAATGAATTGACATTTGGAATTGGTCCTCGGGGATaGCTGAGACTTCCCAGGTCAGAGGCAGAGGATGAACATTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AMVVNELTFGIGPRG*LRLPRSEAEDEHSC Trigger: ACAGGAATGTTCATCCTCTGCCTCTGACCTGGGAAGTCTCAGTCATCCCCGAGGACCAATTCCAAATGTCAATTCATTCACCACCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS TCA 90 bp | ATATGCAACTATGTGAGAAGCGGCAGGTCTGATGGCAGAGATAGATaGGACAGGGGTCCCAGGGTCTCAACTTTCAATAGTGGAAGATCC | + |
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Preference number: 5 (lower is better) Translates to: ICNYVRSGRSDGRDR*DRGPRVSTFNSGRS Trigger: GGATCTTCCACTATTGAAAGTTGAGACCCTGGGACCCCTGTCTCATCTATCTCTGCCATCAGACCTGCCGCTTCTCACATAGTTGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS TCA 90 bp | GAGAGAGTTTCATGGATAGGCCAGATCTCCCAGTGCACACCAAAATaGGGCATCTTGTCCATATGCAACTATGTGAGAAGCGGCAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: ERVSWIGQISQCTPK*GILSICNYVRSGRS Trigger: AGACCTGCCGCTTCTCACATAGTTGCATATGGACAAGATGCCTCATTTTGGTGTGCACTGGGAGATCTGGCCTATCCATGAAACTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS GCA 90 bp | CTTGTAGCTCCTGTAGGGGTTCCCCTCTCTTGCTGGTCATGGAAATaGAAGGTGGACATTGAGATTCCCTCGGTTTCAAGTGTCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: LVAPVGVPLSCWSWK*KVDIEIPSVSSVIL Trigger: AAGAATGACACTTGAAACCGAGGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGGGGAACCCCTACAGGAGCTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS GCA 90 bp | AGCTGGAGCTTTGGGTATCTCCTGTTCACCCACAGTGCTATCTTCTaGAGCAAGCCTGACTTTGTGATGACCTTTGCAATTTCTCCATTT | + |
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Preference number: 5 (lower is better) Translates to: SWSFGYLLFTHSAIF*SKPDFVMTFAISPF Trigger: AAATGGAGAAATTGCAAAGGTCATCACAAAGTCAGGCTTGCTGCAGAAGATAGCACTGTGGGTGAACAGGAGATACCCAAAGCTCCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443636.1 |
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| CDS GCA 90 bp | ATGAACATTCCTGTAGGGGTTCCCCTCTCTTGCTGGTCATGGAAATaGAAGGTGGACATTGAGATTCCCTCGGTTTCAAGTGTCATTCTT | + |
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Preference number: 5 (lower is better) Translates to: MNIPVGVPLSCWSWK*KVDIEIPSVSSVIL Trigger: AAGAATGACACTTGAAACCGAGGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGGGGAACCCCTACAGGAATGTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS CCA 90 bp | TTCAATAGTGGAAGATCCCTCCTAATAGTGGAAGATCCCTGTCTTTaGTTAAAGACAGCCGTTTACTACGATCCCCTGGCTTCCTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: FNSGRSLLIVEDPCL*LKTAVYYDPLASWH Trigger: ATGCCAGGAAGCCAGGGGATCGTAGTAAACGGCTGTCTTTAACCAAAGACAGGGATCTTCCACTATTAGGAGGGATCTTCCACTATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CCA 90 bp | GTTTCACATCTTTTTCTTTTGCCATCTGCAGAAGAAAGCACAGCTTaGCAGCCACCTCTGATAGATCAGACTTTCACAGCTTTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: VSHLFLLPSAEESTA*QPPLIDQTFTALRT Trigger: GGTCCTCAAAGCTGTGAAAGTCTGATCTATCAGAGGTGGCTGCCAAGCTGTGCTTTCTTCTGCAGATGGCAAAAGAAAAAGATGTGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000447257.1 ENST00000655463.1 ENST00000657739.1 |
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| CDS TCA 90 bp | TACCAAATGCTAGGGAAGTTCAGAGGTTGGAGAAATCTTATTCAGTaGTCTAGAAGGGGGTATCAGAGGGCTTTAGGTACCCACCAAACT | + |
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Preference number: 5 (lower is better) Translates to: YQMLGKFRGWRNLIQ*SRRGYQRALGTHQT Trigger: AGTTTGGTGGGTACCTAAAGCCCTCTGATACCCCCTTCTAGATCACTGAATAAGATTTCTCCAACCTCTGAACTTCCCTAGCATTTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS GCA 90 bp | ACTCACCAGGATGTTCAAATCCATACTGTGCATAAAAACAGTATATaGACTGGAGTGACACTTGATCAACTCCTCCTAGAGTCCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: THQDVQIHTVHKNSI*TGVTLDQLLLESKE Trigger: TTCTTTGGACTCTAGGAGGAGTTGATCAAGTGTCACTCCAGTGCATATACTGTTTTTATGCACAGTATGGATTTGAACATCCTGGTGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CCA 90 bp | TTAGGTACCCACCAAACTGATAACAAGATCACAGCTATTATAACTTaGTACCTTGGTACCAGTTTGTTGTTTTCAATAGTCACAGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LGTHQTDNKITAIIT*YLGTSLLFSIVTVG Trigger: TCCCACTGTGACTATTGAAAACAACAAACTGGTACCAAGGTACCAAGTTATAATAGCTGTGATCTTGTTATCAGTTTGGTGGGTACCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS GCA 90 bp | GTACCTTGGTACCAGTTTGTTGTTTTCAATAGTCACAGTGGGAAGTaGGGCATAGAGAAACTTTTTACTTTATACTTTCCAAGTTTGACT | + |
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Preference number: 5 (lower is better) Translates to: VPWYQFVVFNSHSGK*GIEKLFTLYFPSLT Trigger: AGTCAAACTTGGAAAGTATAAAGTAAAAAGTTTCTCTATGCCGCACTTCCCACTGTGACTATTGAAAACAACAAACTGGTACCAAGGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CAA 90 bp | GCCTCTGGGTCTTCTGAGCTGAGCAAGGCACAATCATGGCTGGGCTaGAGAGGAGTCCTCCTGGACGCTACTCAGATTTGGATATGCACG | + |
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Preference number: 6 (lower is better) Translates to: ASGSSELSKAQSWLG*RGVLLDATQIWICT Trigger: CGTGCATATCCAAATCTGAGTAGCGTCCAGGAGGACTCCTCTCAAGCCCAGCCATGATTGTGCCTTGCTCAGCTCAGAAGACCCAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS TCA 72 bp | CCCGGCACGAAGGAAAGCACAGAGACAGGCAAGCCTTaGAAATGTTCAGGGAGCTGGAACCAGAAAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: PGTKESTETGKP*KCSGSWNQKGG Trigger: CCCACCTTTCTGGTTCCAGCTCCCTGAACATTTTCAAGGCTTGCCTGTCTCTGTGCTTTCCTTCGTGCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CAA 72 bp | TCTTCTGAGCTGAGCAAGGCACAATCATGGCTGGGCTaGAGAGGAGTCCTCCTGGACGCTACTCAGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSELSKAQSWLG*RGVLLDATQIW Trigger: CCAAATCTGAGTAGCGTCCAGGAGGACTCCTCTCAAGCCCAGCCATGATTGTGCCTTGCTCAGCTCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CCA 72 bp | TGGCTTGTAGCTCCTGTAGGGGTTCCCCTCTCTTGCTaGTCATGGAAATGCAAGGTGGACATTGAGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: WLVAPVGVPLSC*SWKCKVDIEIP Trigger: GGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGGGGAACCCCTACAGGAGCTACAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CAA 72 bp | GGGCTTGAGAGGAGTCCTCCTGGACGCTACTCAGATTaGGATATGCACGGATGTTGTCCTTCTTCCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: GLERSPPGRYSD*DMHGCCPSSFL Trigger: CAGGAAGGAAGAAGGACAACATCCGTGCATATCCAAATCTGAGTAGCGTCCAGGAGGACTCCTCTCAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS TCA 72 bp | GACAGCCGTTTACTACGATCCCCTGGCTTCCTGGCATaGAAGCAGCTTTCTTTGAATCCTGCTATAATGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSRLLRSPGFLA*KQLSLNPAIMG Trigger: GCCCATTATAGCAGGATTCAAAGAAAGCTGCTTTCATGCCAGGAAGCCAGGGGATCGTAGTAAACGGCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS TCA 72 bp | TATGTGAGAAGCGGCAGGTCTGATGGCAGAGATAGATaGGACAGGGGTCCCAGGGTCTCAACTTTCAATAGT | + |
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Preference number: 6 (lower is better) Translates to: YVRSGRSDGRDR*DRGPRVSTFNS Trigger: ACTATTGAAAGTTGAGACCCTGGGACCCCTGTCTCATCTATCTCTGCCATCAGACCTGCCGCTTCTCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CCA 72 bp | AGGATGAACATTCCTGTAGGGGTTCCCCTCTCTTGCTaGTCATGGAAATGCAAGGTGGACATTGAGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: RMNIPVGVPLSC*SWKCKVDIEIP Trigger: GGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGGGGAACCCCTACAGGAATGTTCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS TCA 72 bp | GTGAATGAATTGACATTTGGAATTGGTCCTCGGGGATaGCTGAGACTTCCCAGGTCAGAGGCAGAGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: VNELTFGIGPRG*LRLPRSEAEDE Trigger: TTCATCCTCTGCCTCTGACCTGGGAAGTCTCAGTCATCCCCGAGGACCAATTCCAAATGTCAATTCATTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS CCA 72 bp | AGCAAATGGAGTAAGTCAGTCCAGAAGCTGGAGCTTTaGGTATCTCCTGTTCACCCACAGTGCTATCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SKWSKSVQKLEL*VSPVHPQCYLL Trigger: CAGAAGATAGCACTGTGGGTGAACAGGAGATACCCAAAGCTCCAGCTTCTGGACTGACTTACTCCATTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443636.1 |
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| CDS CCA 72 bp | GGAAGATCCCTCCTAATAGTGGAAGATCCCTGTCTTTaGTTAAAGACAGCCGTTTACTACGATCCCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GRSLLIVEDPCL*LKTAVYYDPLA Trigger: AGCCAGGGGATCGTAGTAAACGGCTGTCTTTAACCAAAGACAGGGATCTTCCACTATTAGGAGGGATCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 72 bp | TGGAAGATCCCTCCTAATAGTGGAAGATCCCTGTCTTaGGTTAAAGACAGCCGTTTACTACGATCCCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: WKIPPNSGRSLS*VKDSRLLRSPG Trigger: GCCAGGGGATCGTAGTAAACGGCTGTCTTTAACCAAAGACAGGGATCTTCCACTATTAGGAGGGATCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS TCA 72 bp | AGGAGTGGATGCAATGACAAGGGCAATGGTGGTGAATaGATTGACATTTGGAATTGGTCCTCGGGGATGACT | + |
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Preference number: 6 (lower is better) Translates to: RSGCNDKGNGGE*IDIWNWSSGMT Trigger: AGTCATCCCCGAGGACCAATTCCAAATGTCAATTCATTCACCACCATTGCCCTTGTCATTGCATCCACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000443636.1 ENST00000657739.1 |
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| CDS TCA 72 bp | ACGAAAAGGAAAGGACTGCATGGTGAAGGTGGCATATaGCTGGGTTTGGAAAACTCTGTGGATAGGCTAAGG | + |
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Preference number: 6 (lower is better) Translates to: TKRKGLHGEGGI*LGLENSVDRLR Trigger: CCTTAGCCTATCCACAGAGTTTTCCAAACCCAGTCATATGCCACCTTCACCATGCAGTCCTTTCCTTTTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS TCA 72 bp | CACCAAAATGAGGCATCTTGTCCATATGCAACTATGTaGGAAGCGGCAGGTCTGATGGCAGAGATAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: HQNEASCPYATM*EAAGLMAEIDE Trigger: CTCATCTATCTCTGCCATCAGACCTGCCGCTTCTCACATAGTTGCATATGGACAAGATGCCTCATTTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS TCA 72 bp | TCATGGATAGGCCAGATCTCCCAGTGCACACCAAAATaGGGCATCTTGTCCATATGCAACTATGTGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SWIGQISQCTPK*GILSICNYVRS Trigger: GCTTCTCACATAGTTGCATATGGACAAGATGCCTCATTTTGGTGTGCACTGGGAGATCTGGCCTATCCATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 72 bp | GAGAAGTTGAAAAACTTAAGGGCTCTGGTCCCACCTTaGCCAATAGCAGGTTATGTACCATTGGGAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: EKLKNLRALVPP*PIAGYVPLGSP Trigger: GGGACTTCCCAATGGTACATAACCTGCTATTGGCAAAGGTGGGACCAGAGCCCTTAAGTTTTTCAACTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | AATTTGCTGGAGAAGTTGAAAAACTTAAGGGCTCTGGTCCCACCTTaGCCAATAGCAGGTTATGTACCATTGGGAAGTCCCTTCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NLLEKLKNLRALVPP*PIAGYVPLGSPFSS Trigger: AGAGGAGAAGGGACTTCCCAATGGTACATAACCTGCTATTGGCAAAGGTGGGACCAGAGCCCTTAAGTTTTTCAACTTCTCCAGCAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS TCA 72 bp | CCTCTCTTGCTGGTCATGGAAATGCAAGGTGGACATTaGGATTCCCTCGGTTTCAAGTGTCATTCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PLLLVMEMQGGH*DSLGFKCHSLL Trigger: AAGCAAAGAATGACACTTGAAACCGAGGGAATCTCAATGTCCACCTTGCATTTCCATGACCAGCAAGAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000443636.1 ENST00000447257.1 ENST00000655463.1 ENST00000657739.1 |
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| CDS GCA 72 bp | TTTGGGTATCTCCTGTTCACCCACAGTGCTATCTTCTaGAGCAAGCCTGACTTTGTGATGACCTTTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: FGYLLFTHSAIF*SKPDFVMTFAI Trigger: AATTGCAAAGGTCATCACAAAGTCAGGCTTGCTGCAGAAGATAGCACTGTGGGTGAACAGGAGATACCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443636.1 |
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| CDS CCA 72 bp | CTTTTTCTTTTGCCATCTGCAGAAGAAAGCACAGCTTaGCAGCCACCTCTGATAGATCAGACTTTCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: LFLLPSAEESTA*QPPLIDQTFTA Trigger: AGCTGTGAAAGTCTGATCTATCAGAGGTGGCTGCCAAGCTGTGCTTTCTTCTGCAGATGGCAAAAGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000447257.1 ENST00000655463.1 ENST00000657739.1 |
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| CDS CAA 72 bp | GCGTTGCTCTTAGATATGAGGAATTTGCTGGAGAAGTaGAAAAACTTAAGGGCTCTGGTCCCACCTTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: ALLLDMRNLLEK*KNLRALVPPLP Trigger: TGGCAAAGGTGGGACCAGAGCCCTTAAGTTTTTCAACTTCTCCAGCAAATTCCTCATATCTAAGAGCAACGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | TGTTTCACATCTTTTTCTTTTGCCATCTGCAGAAGAAAGCACAGCTaGGCAGCCACCTCTGATAGATCAGACTTTCACAGCTTTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CFTSFSFAICRRKHS*AATSDRSDFHSFED Trigger: GTCCTCAAAGCTGTGAAAGTCTGATCTATCAGAGGTGGCTGCCAAGCTGTGCTTTCTTCTGCAGATGGCAAAAGAAAAAGATGTGAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000447257.1 ENST00000655463.1 ENST00000657739.1 |
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| CDS GCA 72 bp | TCTGATAGATCAGACTTTCACAGCTTTGAGGACCCCTaGCTTCTAGTCAAAACCCTGATGGCTTCTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: SDRSDFHSFEDP*LLVKTLMASSN Trigger: ATTTGAAGAAGCCATCAGGGTTTTGACTAGAAGGCAGGGGTCCTCAAAGCTGTGAAAGTCTGATCTATCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000447257.1 ENST00000655463.1 ENST00000657739.1 |
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| CDS CAA 72 bp | ATAATCTCACAGCTATTTCCTCCTCTGCTGGGTCTGTaGCATGATGCTCTATCAGTACAGAGAGACATTCCA | + |
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Preference number: 6 (lower is better) Translates to: IISQLFPPLLGL*HDALSVQRDIP Trigger: TGGAATGTCTCTCTGTACTGATAGAGCATCATGCAACAGACCCAGCAGAGGAGGAAATAGCTGTGAGATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 72 bp | TTTAACCTCCTCAATTTGGTCTGTGTTATGACCAAATaGGTAGGGAGCCCTTTCAACAGGCAACCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: FNLLNLVCVMTK*VGSPFNRQPME Trigger: CTCCATTGGTTGCCTGTTGAAAGGGCTCCCTACCAATTTGGTCATAACACAGACCAAATTGAGGAGGTTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | AAAACTGAAGCGTTGCTCTTAGATATGAGGAATTTGCTGGAGAAGTaGAAAAACTTAAGGGCTCTGGTCCCACCTTTGCCAATAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KTEALLLDMRNLLEK*KNLRALVPPLPIAG Trigger: ACCTGCTATTGGCAAAGGTGGGACCAGAGCCCTTAAGTTTTTCAACTTCTCCAGCAAATTCCTCATATCTAAGAGCAACGCTTCAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | TTGATCTCTTTTAACCTCCTCAATTTGGTCTGTGTTATGACCAAATaGGTAGGGAGCCCTTTCAACAGGCAACCAATGGAGAGAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LISFNLLNLVCVMTK*VGSPFNRQPMERVS Trigger: TGAAACTCTCTCCATTGGTTGCCTGTTGAAAGGGCTCCCTACCAATTTGGTCATAACACAGACCAAATTGAGGAGGTTAAAAGAGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | AAAGAAGCCATGTTCAGACACTTGATCTCTTTTAACCTCCTCAATTaGGTCTGTGTTATGACCAAATTGGTAGGGAGCCCTTTCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: KEAMFRHLISFNLLN*VCVMTKLVGSPFNR Trigger: CCTGTTGAAAGGGCTCCCTACCAATTTGGTCATAACACAGACCAAATTGAGGAGGTTAAAAGAGATCAAGTGTCTGAACATGGCTTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 72 bp | ATCACAGCTATTATAACTTGGTACCTTGGTACCAGTTaGTTGTTTTCAATAGTCACAGTGGGAAGTGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: ITAIITWYLGTS*LFSIVTVGSAA Trigger: TGCCGCACTTCCCACTGTGACTATTGAAAACAACAAACTGGTACCAAGGTACCAAGTTATAATAGCTGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CAA 72 bp | ATGTTCAGACACTTGATCTCTTTTAACCTCCTCAATTaGGTCTGTGTTATGACCAAATTGGTAGGGAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: MFRHLISFNLLN*VCVMTKLVGSP Trigger: AGGGCTCCCTACCAATTTGGTCATAACACAGACCAAATTGAGGAGGTTAAAAGAGATCAAGTGTCTGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS GCA 72 bp | GATGTTCAAATCCATACTGTGCATAAAAACAGTATATaGACTGGAGTGACACTTGATCAACTCCTCCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: DVQIHTVHKNSI*TGVTLDQLLLE Trigger: CTCTAGGAGGAGTTGATCAAGTGTCACTCCAGTGCATATACTGTTTTTATGCACAGTATGGATTTGAACATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS CAA 90 bp | AGACATTCCAAAGCTCAGAAAAGGTACAGGACAAAGGGCTATCATTaGTATATATATTTTGAGCATCTTTGCTGGGTGGAAGAAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: RHSKAQKRYRTKGYH*YIYFEHLCWVEEGF Trigger: AAATCCTTCTTCCACCCAGCAAAGATGCTCAAAATATATATACAAATGATAGCCCTTTGTCCTGTACCTTTTCTGAGCTTTGGAATGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657739.1 |
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| CDS GCA 72 bp | TACCAGTTTGTTGTTTTCAATAGTCACAGTGGGAAGTaGGGCATAGAGAAACTTTTTACTTTATACTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: YQFVVFNSHSGK*GIEKLFTLYFP Trigger: TGGAAAGTATAAAGTAAAAAGTTTCTCTATGCCGCACTTCCCACTGTGACTATTGAAAACAACAAACTGGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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| CDS CCA 72 bp | ACCCTCAAATCAATTGAGTCAGCAAAGACTGAAGTGTaGGGATCAATTAAGGTAAGTATAGATATAACTATA | + |
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Preference number: 6 (lower is better) Translates to: TLKSIESAKTEV*GSIKVSIDITI Trigger: TATAGTTATATCTATACTTACCTTAATTGATCCCCACACTTCAGTCTTTGCTGACTCAATTGATTTGAGGGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655463.1 |
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