Pregenerated sensors for LINC01682 (Homo sapiens)
Ensembl gene IDs: ENSG00000227043Ensembl transcript IDs: ENST00000435973.2, ENST00000650825.1, ENST00000661713.1, ENST00000669450.1, ENST00000669533.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GAGGCTGCCCAGTCTCTGTCTGCAGCCCCATCTTCCACTTCAGTGTaGTCCAGCTTCAGTGTGCTCCAGCGGACTCTGGGGCCCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: EAAQSLSAAPSSTSV*SSFSVLQRTLGPRA Trigger: AGCTCTGGGCCCCAGAGTCCGCTGGAGCACACTGAAGCTGGAGCACACTGAAGTGGAAGATGGGGCTGCAGACAGAGACTGGGCAGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 90 bp | CTGGCTCTCGGGCCTCCCTGGAGCAGAGGCTGCCCAGTCTCTGTCTaGAGCCCCATCTTCCACTTCAGTGTGCTCCAGCTTCAGTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: LALGPPWSRGCPVSV*SPIFHFSVLQLQCA Trigger: AGCACACTGAAGCTGGAGCACACTGAAGTGGAAGATGGGGCTGCAGACAGAGACTGGGCAGCCTCTGCTCCAGGGAGGCCCGAGAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS TCA 90 bp | CTGGGCTCAGGATCTGGTGAGCCGGCCACACCTTGGAGTCTGCTCTaGCCTCCATGTAGTGGCACAGGCTGGGTGGAGGAACTATGGATG | + |
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Preference number: 5 (lower is better) Translates to: LGSGSGEPATPWSLL*PPCSGTGWVEELWM Trigger: CATCCATAGTTCCTCCACCCAGCCTGTGCCACTACATGGAGGTCAGAGCAGACTCCAAGGTGTGGCCGGCTCACCAGATCCTGAGCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS GCA 90 bp | GACACCTGGGCTCAGGATCTGGTGAGCCGGCCACACCTTGGAGTCTaGTCTGACCTCCATGTAGTGGCACAGGCTGGGTGGAGGAACTAT | + |
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Preference number: 5 (lower is better) Translates to: DTWAQDLVSRPHLGV*SDLHVVAQAGWRNY Trigger: ATAGTTCCTCCACCCAGCCTGTGCCACTACATGGAGGTCAGAGCAGACTCCAAGGTGTGGCCGGCTCACCAGATCCTGAGCCCAGGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 90 bp | TCAGCCTGGTCTCTGCTCGTGGAGCTCAGCCTGCCTCAAGCATCCTaGGAACCTGTGCCGTCTGTCTCAGCTCTTCTCACCATCCAAATC | + |
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Preference number: 5 (lower is better) Translates to: SAWSLLVELSLPQAS*EPVPSVSALLTIQI Trigger: GATTTGGATGGTGAGAAGAGCTGAGACAGACGGCACAGGTTCTCAGGATGCTTGAGGCAGGCTGAGCTCCACGAGCAGAGACCAGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661713.1 ENST00000669450.1 |
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| CDS CCA 90 bp | AGTTATTCTTCTTATGGAATCTGCTCTCTGGCTCTCGGGCCTCCCTaGAGCAGAGGCTGCCCAGTCTCTGTCTGCAGCCCCATCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: SYSSYGICSLALGPP*SRGCPVSVCSPIFH Trigger: GTGGAAGATGGGGCTGCAGACAGAGACTGGGCAGCCTCTGCTCCAGGGAGGCCCGAGAGCCAGAGAGCAGATTCCATAAGAAGAATAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 90 bp | AGGGTCTCATGCATGAGGAATGGGAGTTATTCTTCTTATGGAATCTaGTCTCTGGCTCTCGGGCCTCCCTGGAGCAGAGGCTGCCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RVSCMRNGSYSSYGI*SLALGPPWSRGCPV Trigger: GACTGGGCAGCCTCTGCTCCAGGGAGGCCCGAGAGCCAGAGAGCAGATTCCATAAGAAGAATAACTCCCATTCCTCATGCATGAGACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 90 bp | TTCAGTGTGCTCCAGCGGACTCTGGGGCCCAGAGCTGCATCTCTTTaGCTGAAGCCTTTCTCTGTAGCCACAGAAGGTCATTCTGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: FSVLQRTLGPRAASL*LKPFSVATEGHSAC Trigger: ACAAGCAGAATGACCTTCTGTGGCTACAGAGAAAGGCTTCAGGCAAAGAGATGCAGCTCTGGGCCCCAGAGTCCGCTGGAGCACACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 90 bp | ATGATGAGGTCATGTATGTGGAAGCTCTTGCACATGGTTAGGTACTaGCTCAAGCATCCTGAGAACCTGTGCCGTCTGTCTCAGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: MMRSCMWKLLHMVRY*LKHPENLCRLSQLF Trigger: GAAGAGCTGAGACAGACGGCACAGGTTCTCAGGATGCTTGAGGCAGTACCTAACCATGTGCAAGAGCTTCCACATACATGACCTCATCAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CCA 90 bp | GGTATTTCTAGCTTCCACTTTGGCGGTATTTGGAGAGCAGAGCTGTaGACTGGAAGTCTGAAGTCAATGTTCTACCCTCTGTCCCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GISSFHFGGIWRAEL*TGSLKSMFYPLSLP Trigger: AGGGAGGGACAGAGGGTAGAACATTGACTTCAGACTTCCAGTCCACAGCTCTGCTCTCCAAATACCGCCAAAGTGGAAGCTAGAAATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 90 bp | TGCTGTGTTACTATTTCCATGAGCTCTCCTGGAGTTTTCTCTCCTTaGTGGTCCTCTGGGTGCCATCTTTATACTCACCCCCAGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: CCVTISMSSPGVFSP*WSSGCHLYTHPQTE Trigger: CTCTGTCTGGGGGTGAGTATAAAGATGGCACCCAGAGGACCATCAAGGAGAGAAAACTCCAGGAGAGCTCATGGAAATAGTAACACAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS GCA 90 bp | GTAGGTTCCTGGTTATATCGGCTCTTCTTTTTGTCATCCAGTTCCTaGAACACAAAGCCTGTAATACTGCTGGTGTCCTGGCTTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: VGSWLYRLFFLSSSS*NTKPVILLVSWLGR Trigger: CCTCCCAAGCCAGGACACCAGCAGTATTACAGGCTTTGTGTTGCAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669533.1 |
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| CDS CCA 90 bp | TATTTCCATGAGCTCTCCTGGAGTTTTCTCTCCTTGATGGTCCTCTaGGTGCCATCTTTATACTCACCCCCAGACAGAGTGATGAATGGC | + |
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Preference number: 5 (lower is better) Translates to: YFHELSWSFLSLMVL*VPSLYSPPDRVMNG Trigger: GCCATTCATCACTCTGTCTGGGGGTGAGTATAAAGATGGCACCCAGAGGACCATCAAGGAGAGAAAACTCCAGGAGAGCTCATGGAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CCA 90 bp | CGGGAGGCAGAGTGTTGTCTGAGCAAATTCATTTGTCACTTTACCTaGAGGAGGAATGCTTTGCTCAAAGGAGCCTATGAGACAGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: REAECCLSKFICHFT*RRNALLKGAYETAL Trigger: CAGAGCTGTCTCATAGGCTCCTTTGAGCAAAGCATTCCTCCTCCAGGTAAAGTGACAAATGAATTTGCTCAGACAACACTCTGCCTCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669450.1 |
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| CDS TCA 90 bp | TCCACTTTGGCGGTATTTGGAGAGCAGAGCTGTGGACTGGAAGTCTaGAGTCAATGTTCTACCCTCTGTCCCTCCCTATTCTTTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: STLAVFGEQSCGLEV*SQCSTLCPSLFFAF Trigger: AAAAGCAAAGAATAGGGAGGGACAGAGGGTAGAACATTGACTTCAGACTTCCAGTCCACAGCTCTGCTCTCCAAATACCGCCAAAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CCA 90 bp | AGGCTGGACTTTAGATCCTTACTTGGGGTGGCCAGAGTAGGTTCCTaGTTATATCGGCTCTTCTTTTTGTCATCCAGTTCCTGCAACACA | + |
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Preference number: 5 (lower is better) Translates to: RLDFRSLLGVARVGS*LYRLFFLSSSSCNT Trigger: TGTGTTGCAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAAGTAAGGATCTAAAGTCCAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669533.1 |
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| CDS CCA 90 bp | AGGCTGGACTTTAGATCCTTACTTGGGGTGGCCAGAGTAGGTTCCTaGTTATATCGGCTCTTCTTTTTGTCATCCAGTTCCTGTAATACT | + |
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Preference number: 5 (lower is better) Translates to: RLDFRSLLGVARVGS*LYRLFFLSSSSCNT Trigger: AGTATTACAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAAGTAAGGATCTAAAGTCCAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435973.2 |
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| CDS CCA 90 bp | TCACCATCCAAATCCATGACCATTGGGGTGGCCAGAGTAGGTTCCTaGTTATATCGGCTCTTCTTTTTGTCATCCAGTTCCTGTAATACT | + |
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Preference number: 5 (lower is better) Translates to: SPSKSMTIGVARVGS*LYRLFFLSSSSCNT Trigger: AGTATTACAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAATGGTCATGGATTTGGATGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661713.1 |
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| CDS GCA 72 bp | GCTCAGGATCTGGTGAGCCGGCCACACCTTGGAGTCTaGTCTGACCTCCATGTAGTGGCACAGGCTGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: AQDLVSRPHLGV*SDLHVVAQAGW Trigger: CCACCCAGCCTGTGCCACTACATGGAGGTCAGAGCAGACTCCAAGGTGTGGCCGGCTCACCAGATCCTGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 72 bp | GGATCTGGTGAGCCGGCCACACCTTGGAGTCTGCTCTaGCCTCCATGTAGTGGCACAGGCTGGGTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: GSGEPATPWSLL*PPCSGTGWVEE Trigger: TTCCTCCACCCAGCCTGTGCCACTACATGGAGGTCAGAGCAGACTCCAAGGTGTGGCCGGCTCACCAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS GCA 72 bp | CCCCATCTTCCACTTCAGTGTGCTCCAGCTTCAGTGTaGTCCAGCGGACTCTGGGGCCCAGAGCTGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: PHLPLQCAPASV*SSGLWGPELHL Trigger: GAGATGCAGCTCTGGGCCCCAGAGTCCGCTGGAGCACACTGAAGCTGGAGCACACTGAAGTGGAAGATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 72 bp | CAGTCTCTGTCTGCAGCCCCATCTTCCACTTCAGTGTaGTCCAGCTTCAGTGTGCTCCAGCGGACTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QSLSAAPSSTSV*SSFSVLQRTLG Trigger: CCCCAGAGTCCGCTGGAGCACACTGAAGCTGGAGCACACTGAAGTGGAAGATGGGGCTGCAGACAGAGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS CAA 90 bp | GTGGGAAAGCTGGGCTGGACTCAAGGATCAGTCTGGTGGGTTGGATaGGCCCAGCTTGCTCTCCTCTATAACCAGAGGAGTGGGCTGACC | + |
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Preference number: 6 (lower is better) Translates to: VGKLGWTQGSVWWVG*AQLALLYNQRSGLT Trigger: GGTCAGCCCACTCCTCTGGTTATAGAGGAGAGCAAGCTGGGCCAATCCAACCCACCAGACTGATCCTTGAGTCCAGCCCAGCTTTCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 90 bp | GACCTGTGGGAAAGCTGGGCTGGACTCAAGGATCAGTCTGGTGGGTaGGATTGGCCCAGCTTGCTCTCCTCTATAACCAGAGGAGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DLWESWAGLKDQSGG*DWPSLLSSITRGVG Trigger: GCCCACTCCTCTGGTTATAGAGGAGAGCAAGCTGGGCCAATCCAACCCACCAGACTGATCCTTGAGTCCAGCCCAGCTTTCCCACAGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 72 bp | TCTCTGCTCGTGGAGCTCAGCCTGCCTCAAGCATCCTaGGAACCTGTGCCGTCTGTCTCAGCTCTTCTCACC | + |
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Preference number: 6 (lower is better) Translates to: SLLVELSLPQAS*EPVPSVSALLT Trigger: GGTGAGAAGAGCTGAGACAGACGGCACAGGTTCTCAGGATGCTTGAGGCAGGCTGAGCTCCACGAGCAGAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661713.1 ENST00000669450.1 |
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| CDS GCA 72 bp | CTTCAGTGTGCTCCAGCGGACTCTGGGGCCCAGAGCTaGATCTCTTTGCCTGAAGCCTTTCTCTGTAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LQCAPADSGAQS*ISLPEAFLCSH Trigger: GTGGCTACAGAGAAAGGCTTCAGGCAAAGAGATGCAGCTCTGGGCCCCAGAGTCCGCTGGAGCACACTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS GCA 72 bp | CTCCAGCGGACTCTGGGGCCCAGAGCTGCATCTCTTTaGCTGAAGCCTTTCTCTGTAGCCACAGAAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LQRTLGPRAASL*LKPFSVATEGH Trigger: ATGACCTTCTGTGGCTACAGAGAAAGGCTTCAGGCAAAGAGATGCAGCTCTGGGCCCCAGAGTCCGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS CCA 72 bp | CCTGTGGGAAAGCTGGGCTGGACTCAAGGATCAGTCTaGTGGGTTGGATTGGCCCAGCTTGCTCTCCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: PVGKLGWTQGSV*WVGLAQLALLY Trigger: ATAGAGGAGAGCAAGCTGGGCCAATCCAACCCACCAGACTGATCCTTGAGTCCAGCCCAGCTTTCCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CCA 72 bp | GTGGGAAAGCTGGGCTGGACTCAAGGATCAGTCTGGTaGGTTGGATTGGCCCAGCTTGCTCTCCTCTATAAC | + |
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Preference number: 6 (lower is better) Translates to: VGKLGWTQGSVW*VGLAQLALLYN Trigger: GTTATAGAGGAGAGCAAGCTGGGCCAATCCAACCCACCAGACTGATCCTTGAGTCCAGCCCAGCTTTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS GCA 72 bp | TGCATGAGGAATGGGAGTTATTCTTCTTATGGAATCTaGTCTCTGGCTCTCGGGCCTCCCTGGAGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CMRNGSYSSYGI*SLALGPPWSRG Trigger: GCCTCTGCTCCAGGGAGGCCCGAGAGCCAGAGAGCAGATTCCATAAGAAGAATAACTCCCATTCCTCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 ENST00000669533.1 |
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| CDS CCA 72 bp | CCTCCATGTAGTGGCACAGGCTGGGTGGAGGAACTATaGATGGCCTTAGTGGCCCATGAAGTGTCTGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PPCSGTGWVEEL*MALVAHEVSGL Trigger: TAAACCAGACACTTCATGGGCCACTAAGGCCATCCATAGTTCCTCCACCCAGCCTGTGCCACTACATGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 72 bp | GAGATCACGATGGGAGGCAAGGAAGCAGAGGAGAGGTaGATTCAGGTCACTCTGTCAAAAACTCAGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: EITMGGKEAEER*IQVTLSKTQAG Trigger: CCCTGCCTGAGTTTTTGACAGAGTGACCTGAATTCACCTCTCCTCTGCTTCCTTGCCTCCCATCGTGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661713.1 |
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| CDS TCA 72 bp | AGAGCTGCCACGGGTACCAGCCCAATGGTGTGTATGTaGCTTGCACTGAAGTCATCTCTGCAGCTGAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RAATGTSPMVCM*LALKSSLQLSL Trigger: AAGACTCAGCTGCAGAGATGACTTCAGTGCAAGTCACATACACACCATTGGGCTGGTACCCGTGGCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669450.1 |
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| CDS CCA 72 bp | GAGCTCTCCTGGAGTTTTCTCTCCTTGATGGTCCTCTaGGTGCCATCTTTATACTCACCCCCAGACAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ELSWSFLSLMVL*VPSLYSPPDRV Trigger: CACTCTGTCTGGGGGTGAGTATAAAGATGGCACCCAGAGGACCATCAAGGAGAGAAAACTCCAGGAGAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 90 bp | CTTGGGGTGGCCAGAGTAGGTTCCTGGTTATATCGGCTCTTCTTTTaGTCATCCAGTTCCTGTAATACTGCTGGTGTCCTGGCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LGVARVGSWLYRLFF*SSSSCNTAGVLAWE Trigger: CTCCCAAGCCAGGACACCAGCAGTATTACAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000435973.2 ENST00000669450.1 |
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| CDS TCA 72 bp | GCGGTATTTGGAGAGCAGAGCTGTGGACTGGAAGTCTaGAGTCAATGTTCTACCCTCTGTCCCTCCCTATTC | + |
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Preference number: 6 (lower is better) Translates to: AVFGEQSCGLEV*SQCSTLCPSLF Trigger: GAATAGGGAGGGACAGAGGGTAGAACATTGACTTCAGACTTCCAGTCCACAGCTCTGCTCTCCAAATACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 90 bp | ATTGGGGTGGCCAGAGTAGGTTCCTGGTTATATCGGCTCTTCTTTTaGTCATCCAGTTCCTGTAATACTGCTGGTGTCCTGGCTTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: IGVARVGSWLYRLFF*SSSSCNTAGVLAWE Trigger: CTCCCAAGCCAGGACACCAGCAGTATTACAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661713.1 |
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| CDS GCA 72 bp | TCATGTATGTGGAAGCTCTTGCACATGGTTAGGTACTaGCTCAAGCATCCTGAGAACCTGTGCCGTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SCMWKLLHMVRY*LKHPENLCRLS Trigger: AGACAGACGGCACAGGTTCTCAGGATGCTTGAGGCAGTACCTAACCATGTGCAAGAGCTTCCACATACATGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CCA 72 bp | AGCTTCCACTTTGGCGGTATTTGGAGAGCAGAGCTGTaGACTGGAAGTCTGAAGTCAATGTTCTACCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SFHFGGIWRAEL*TGSLKSMFYPL Trigger: CAGAGGGTAGAACATTGACTTCAGACTTCCAGTCCACAGCTCTGCTCTCCAAATACCGCCAAAGTGGAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 72 bp | CTGGATGATTCTCAATCAACCTGGAGGAGGAATGCTTaGCTCAAAGGAGCCTATGAGACAGCTCTGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LDDSQSTWRRNA*LKGAYETALQS Trigger: GGACTGCAGAGCTGTCTCATAGGCTCCTTTGAGCAAAGCATTCCTCCTCCAGGTTGATTGAGAATCATCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661713.1 |
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| CDS CAA 90 bp | CTTGGGGTGGCCAGAGTAGGTTCCTGGTTATATCGGCTCTTCTTTTaGTCATCCAGTTCCTGCAACACAAAGCCTGTAATACTGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LGVARVGSWLYRLFF*SSSSCNTKPVILLV Trigger: CACCAGCAGTATTACAGGCTTTGTGTTGCAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGCCACCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669533.1 |
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| CDS TCA 72 bp | ACTATTTCCATGAGCTCTCCTGGAGTTTTCTCTCCTTaGTGGTCCTCTGGGTGCCATCTTTATACTCACCCC | + |
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Preference number: 6 (lower is better) Translates to: TISMSSPGVFSP*WSSGCHLYTHP Trigger: GGGGTGAGTATAAAGATGGCACCCAGAGGACCATCAAGGAGAGAAAACTCCAGGAGAGCTCATGGAAATAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 90 bp | TTGCTGTGTTACTATTTCCATGAGCTCTCCTGGAGTTTTCTCTCCTaGATGGTCCTCTGGGTGCCATCTTTATACTCACCCCCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCYYFHELSWSFLS*MVLWVPSLYSPPDR Trigger: TCTGTCTGGGGGTGAGTATAAAGATGGCACCCAGAGGACCATCAAGGAGAGAAAACTCCAGGAGAGCTCATGGAAATAGTAACACAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 72 bp | GCCAGAGTAGGTTCCTGGTTATATCGGCTCTTCTTTTaGTCATCCAGTTCCTGTAATACTGCTGGTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARVGSWLYRLFF*SSSSCNTAGVL Trigger: CAGGACACCAGCAGTATTACAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCAGGAACCTACTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000435973.2 ENST00000661713.1 ENST00000669450.1 |
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| CDS CAA 90 bp | TTATGGGAAAACACGGGAGGCAGAGTGTTGTCTGAGCAAATTCATTaGTCACTTTACCTGGAGGAGGAATGCTTTGCTCAAAGGAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: LWENTGGRVLSEQIH*SLYLEEECFAQRSL Trigger: TAGGCTCCTTTGAGCAAAGCATTCCTCCTCCAGGTAAAGTGACAAATGAATTTGCTCAGACAACACTCTGCCTCCCGTGTTTTCCCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669450.1 |
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| CDS GCA 72 bp | TGGTTATATCGGCTCTTCTTTTTGTCATCCAGTTCCTaGAACACAAAGCCTGTAATACTGCTGGTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: WLYRLFFLSSSS*NTKPVILLVSW Trigger: CCAGGACACCAGCAGTATTACAGGCTTTGTGTTGCAGGAACTGGATGACAAAAAGAAGAGCCGATATAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669533.1 |
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| CDS CAA 72 bp | ACTCTTGATATGATGAGGTCATGTATGTGGAAGCTCTaGCACATGGTTAGGTACTGCCTCAAGCATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TLDMMRSCMWKL*HMVRYCLKHPE Trigger: CTCAGGATGCTTGAGGCAGTACCTAACCATGTGCAAGAGCTTCCACATACATGACCTCATCATATCAAGAGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS CAA 90 bp | TGTCTGAGCAAATTCATTTGTCACTTTACCTGGAGGAGGAATGCTTaGCTCAAAGGAGCCTATGAGACAGCTCTGCAGTCCTTCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: CLSKFICHFTWRRNA*LKGAYETALQSFIF Trigger: AAAGATGAAGGACTGCAGAGCTGTCTCATAGGCTCCTTTGAGCAAAGCATTCCTCCTCCAGGTAAAGTGACAAATGAATTTGCTCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669450.1 |
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| CDS GCA 72 bp | TGTTTGACTTTTTCTATATTTACTAGCTCTGATGCGTaGTCCCCCTCTTCTCCTGGGTTTATGGGTAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CLTFSIFTSSDA*SPSSPGFMGKD Trigger: GTCCTTACCCATAAACCCAGGAGAAGAGGGGGAGCACGCATCAGAGCTAGTAAATATAGAAAAAGTCAAACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 72 bp | GGCACAGGAATGAAAGTCGTATCATTGAAGAACTCTTaGTATGATGAGGTCATGTATGTGGAAGCTCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GTGMKVVSLKNS*YDEVMYVEALA Trigger: TGCAAGAGCTTCCACATACATGACCTCATCATATCAAGAGTTCTTCAATGATACGACTTTCATTCCTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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| CDS TCA 72 bp | AAGCAAGAGGGTCTCTTGACTTTGTCTGAAACTCTTTaGCTTGGCACAGGAATGAAAGTCGTATCATTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KQEGLLTLSETL*LGTGMKVVSLK Trigger: CTTCAATGATACGACTTTCATTCCTGTGCCAAGTCAAAGAGTTTCAGACAAAGTCAAGAGACCCTCTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650825.1 |
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