Pregenerated sensors for LINC01671 (Homo sapiens)
Ensembl gene IDs: ENSG00000225431Ensembl transcript IDs: ENST00000419628.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGTCTGATACCTCTCATAACACAGGGTCCGACCAGCTGCAGGGCCTaGGTCACAGGGCTGCCAGCACTGCAGCCTCGACCTGCTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RLIPLITQGPTSCRA*VTGLPALQPRPAAG Trigger: GCCTGCAGCAGGTCGAGGCTGCAGTGCTGGCAGCCCTGTGACTCAGGCCCTGCAGCTGGTCGGACCCTGTGTTATGAGAGGTATCAGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 90 bp | GAGGCCAGCCTTGGCAAACTCCAAGAGGAGTCCAGGCGAGAGGAATaGTCCTGTGTAGGCAGAGACGCCCCAGGCAGTGCCGGAGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: EASLGKLQEESRREE*SCVGRDAPGSAGAE Trigger: CTCAGCTCCGGCACTGCCTGGGGCGTCTCTGCCTACACAGGACCATTCCTCTCGCCTGGACTCCTCTTGGAGTTTGCCAAGGCTGGCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | GATCCCGCGCCTGGCAGGGCAGCTGCCGCTGTGGATTCTCCTTGGTaGAGCTTGCTGAAGTCCACTGTCTTCCTCCAGGAGTCTCCTATT | + |
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Preference number: 5 (lower is better) Translates to: DPAPGRAAAAVDSPW*SLLKSTVFLQESPI Trigger: AATAGGAGACTCCTGGAGGAAGACAGTGGACTTCAGCAAGCTGCACCAAGGAGAATCCACAGCGGCAGCTGCCCTGCCAGGCGCGGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | TGGTTAGCACCCGGCCAGCGCAATGTAATCAATGTGGTGGGCCAGTaGCATGCTCTTTGGGATATCCAGCTTGTCCAGTTCTCTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: WLAPGQRNVINVVGQ*HALWDIQLVQFSLG Trigger: GCCCAGAGAGAACTGGACAAGCTGGATATCCCAAAGAGCATGGCACTGGCCCACCACATTGATTACATTGCGCTGGCCGGGTGCTAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 90 bp | CACTGTCTTCCTCCAGGAGTCTCCTATTTCTGCAGAGGCCAGCCTTaGCAAACTCCAAGAGGAGTCCAGGCGAGAGGAATGGTCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: HCLPPGVSYFCRGQP*QTPRGVQARGMVLC Trigger: ACACAGGACCATTCCTCTCGCCTGGACTCCTCTTGGAGTTTGCCAAGGCTGGCCTCTGCAGAAATAGGAGACTCCTGGAGGAAGACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | GGCAGGCTCTTTCGGATGCTCTTTCCTCGTAGGAATAGAAAAGAATaGACTTGCCATCTCAGTGGGGCAGAGCACACACCTGAGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: GRLFRMLFPRRNRKE*TCHLSGAEHTPEAV Trigger: CACAGCCTCAGGTGTGTGCTCTGCCCCACTGAGATGGCAAGTGCATTCTTTTCTATTCCTACGAGGAAAGAGCATCCGAAAGAGCCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | GCTGCAGGCACTCAGGCATCTTACCAAGACTCCCAGTGTGTTAGCTaGTTCTTGGTTAGCACCCGGCCAGCGCAATGTAATCAATGTGGT | + |
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Preference number: 5 (lower is better) Translates to: AAGTQASYQDSQCVS*FLVSTRPAQCNQCG Trigger: ACCACATTGATTACATTGCGCTGGCCGGGTGCTAACCAAGAAGCAGCTAACACACTGGGAGTCTTGGTAAGATGCCTGAGTGCCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 90 bp | AACTTACAATCATGGCGGAAGGGGAAGCAGGCACGTCTTACGTGGTaGTGGGTGAGAAAGACAAGTGCAAGCAGGGGAATTGCCAGACAC | + |
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Preference number: 5 (lower is better) Translates to: NLQSWRKGKQARLTW*WVRKTSASRGIARH Trigger: GTGTCTGGCAATTCCCCTGCTTGCACTTGTCTTTCTCACCCACCACCACGTAAGACGTGCCTGCTTCCCCTTCCGCCATGATTGTAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 90 bp | CTTTGCTGTGGACAGGAGGCCCAGTATGCTCCTGGTTATGGGATATaGGACCTCCCCACCAAGAGTGTTATTAGTGGCAGTTCCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LCCGQEAQYAPGYGI*DLPTKSVISGSSQN Trigger: ATTCTGGGAACTGCCACTAATAACACTCTTGGTGGGGAGGTCCCATATCCCATAACCAGGAGCATACTGGGCCTCCTGTCCACAGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | CAAGATGCAGTAATTGGCTCTTTGCTGTGGACAGGAGGCCCAGTATaGTCCTGGTTATGGGATATGGGACCTCCCCACCAAGAGTGTTAT | + |
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Preference number: 5 (lower is better) Translates to: QDAVIGSLLWTGGPV*SWLWDMGPPHQECY Trigger: ATAACACTCTTGGTGGGGAGGTCCCATATCCCATAACCAGGAGCATACTGGGCCTCCTGTCCACAGCAAAGAGCCAATTACTGCATCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 90 bp | AGAGTGTTATTAGTGGCAGTTCCCAGAATCTTTGTAGGATTTGTCTaGCAGCTGCAGGCACTCAGGCATCTTACCAAGACTCCCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RVLLVAVPRIFVGFV*QLQALRHLTKTPSV Trigger: CACACTGGGAGTCTTGGTAAGATGCCTGAGTGCCTGCAGCTGGCAGACAAATCCTACAAAGATTCTGGGAACTGCCACTAATAACACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 90 bp | GCCAGTGCCATGCTCTTTGGGATATCCAGCTTGTCCAGTTCTCTCTaGGCTTCCTTAGGGCATAGAATACATGGTTTATTAGCACATAAC | + |
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Preference number: 5 (lower is better) Translates to: ASAMLFGISSLSSSL*ASLGHRIHGLLAHN Trigger: GTTATGTGCTAATAAACCATGTATTCTATGCCCTAAGGAAGCCCAGAGAGAACTGGACAAGCTGGATATCCCAAAGAGCATGGCACTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS TCA 72 bp | CCTCTCATAACACAGGGTCCGACCAGCTGCAGGGCCTaGGTCACAGGGCTGCCAGCACTGCAGCCTCGACCT | + |
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Preference number: 6 (lower is better) Translates to: PLITQGPTSCRA*VTGLPALQPRP Trigger: AGGTCGAGGCTGCAGTGCTGGCAGCCCTGTGACTCAGGCCCTGCAGCTGGTCGGACCCTGTGTTATGAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS TCA 72 bp | ATCTCAGTGGGGCAGAGCACACACCTGAGGCTGTGTTaGTCCACCTTGACCGAGATCCCGCGCCTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ISVGQSTHLRLC*STLTEIPRLAG Trigger: CCCTGCCAGGCGCGGGATCTCGGTCAAGGTGGATCAACACAGCCTCAGGTGTGTGCTCTGCCCCACTGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CAA 72 bp | CGCGCCTGGCAGGGCAGCTGCCGCTGTGGATTCTCCTaGGTGCAGCTTGCTGAAGTCCACTGTCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RAWQGSCRCGFS*VQLAEVHCLPP Trigger: TGGAGGAAGACAGTGGACTTCAGCAAGCTGCACCAAGGAGAATCCACAGCGGCAGCTGCCCTGCCAGGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CAA 72 bp | CATCTCAGTGGGGCAGAGCACACACCTGAGGCTGTGTaGATCCACCTTGACCGAGATCCCGCGCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLSGAEHTPEAV*IHLDRDPAPGR Trigger: CCTGCCAGGCGCGGGATCTCGGTCAAGGTGGATCAACACAGCCTCAGGTGTGTGCTCTGCCCCACTGAGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | CCTGGCAGGGCAGCTGCCGCTGTGGATTCTCCTTGGTaGAGCTTGCTGAAGTCCACTGTCTTCCTCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: PGRAAAAVDSPW*SLLKSTVFLQE Trigger: CTCCTGGAGGAAGACAGTGGACTTCAGCAAGCTGCACCAAGGAGAATCCACAGCGGCAGCTGCCCTGCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | CTTGGCAAACTCCAAGAGGAGTCCAGGCGAGAGGAATaGTCCTGTGTAGGCAGAGACGCCCCAGGCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LGKLQEESRREE*SCVGRDAPGSA Trigger: GGCACTGCCTGGGGCGTCTCTGCCTACACAGGACCATTCCTCTCGCCTGGACTCCTCTTGGAGTTTGCCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CAA 90 bp | CCACTGTCTTCCTCCAGGAGTCTCCTATTTCTGCAGAGGCCAGCCTaGGCAAACTCCAAGAGGAGTCCAGGCGAGAGGAATGGTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PLSSSRSLLFLQRPA*ANSKRSPGERNGPV Trigger: CACAGGACCATTCCTCTCGCCTGGACTCCTCTTGGAGTTTGCCAAGGCTGGCCTCTGCAGAAATAGGAGACTCCTGGAGGAAGACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS TCA 72 bp | GGAAGGGGAAGCAGGCACGTCTTACGTGGTGGTGGGTaGGAAAGACAAGTGCAAGCAGGGGAATTGCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GRGSRHVLRGGG*ERQVQAGELPD Trigger: GTCTGGCAATTCCCCTGCTTGCACTTGTCTTTCTCACCCACCACCACGTAAGACGTGCCTGCTTCCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | GGCTCTTTGCTGTGGACAGGAGGCCCAGTATGCTCCTaGTTATGGGATATGGGACCTCCCCACCAAGAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GSLLWTGGPVCS*LWDMGPPHQEC Trigger: ACACTCTTGGTGGGGAGGTCCCATATCCCATAACCAGGAGCATACTGGGCCTCCTGTCCACAGCAAAGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | CAATCATGGCGGAAGGGGAAGCAGGCACGTCTTACGTaGTGGTGGGTGAGAAAGACAAGTGCAAGCAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: QSWRKGKQARLT*WWVRKTSASRG Trigger: TCCCCTGCTTGCACTTGTCTTTCTCACCCACCACCACGTAAGACGTGCCTGCTTCCCCTTCCGCCATGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | TCATGGCGGAAGGGGAAGCAGGCACGTCTTACGTGGTaGTGGGTGAGAAAGACAAGTGCAAGCAGGGGAATT | + |
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Preference number: 6 (lower is better) Translates to: SWRKGKQARLTW*WVRKTSASRGI Trigger: AATTCCCCTGCTTGCACTTGTCTTTCTCACCCACCACCACGTAAGACGTGCCTGCTTCCCCTTCCGCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS TCA 72 bp | CAGCTGCCGCTGTGGATTCTCCTTGGTGCAGCTTGCTaGAGTCCACTGTCTTCCTCCAGGAGTCTCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: QLPLWILLGAAC*SPLSSSRSLLF Trigger: AAATAGGAGACTCCTGGAGGAAGACAGTGGACTTCAGCAAGCTGCACCAAGGAGAATCCACAGCGGCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | GTAATTGGCTCTTTGCTGTGGACAGGAGGCCCAGTATaGTCCTGGTTATGGGATATGGGACCTCCCCACCAA | + |
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Preference number: 6 (lower is better) Translates to: VIGSLLWTGGPV*SWLWDMGPPHQ Trigger: TTGGTGGGGAGGTCCCATATCCCATAACCAGGAGCATACTGGGCCTCCTGTCCACAGCAAAGAGCCAATTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | GTGAGACAGAATCCAGCTCATCTGAGCAGTTCCACATaGACAATCAGGTATTCCATCACCCCAGGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VRQNPAHLSSST*TIRYSITPGPR Trigger: CCTGGGGCCTGGGGTGATGGAATACCTGATTGTGCATGTGGAACTGCTCAGATGAGCTGGATTCTGTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | GGACAGGAGGCCCAGTATGCTCCTGGTTATGGGATATaGGACCTCCCCACCAAGAGTGTTATTAGTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GQEAQYAPGYGI*DLPTKSVISGS Trigger: ACTGCCACTAATAACACTCTTGGTGGGGAGGTCCCATATCCCATAACCAGGAGCATACTGGGCCTCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | GCAGGCTCAGGGAAGGCCGACAGCTTCTCCTATCAATaGTACATAGGCTGGAGTAGTCTTCATGTGTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: AGSGKADSFSYQ*YIGWSSLHVCG Trigger: TCCACACACATGAAGACTACTCCAGCCTATGTACCATTGATAGGAGAAGCTGTCGGCCTTCCCTGAGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | CCAGCGCAATGTAATCAATGTGGTGGGCCAGTGCCATaGTCTTTGGGATATCCAGCTTGTCCAGTTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PAQCNQCGGPVP*SLGYPACPVLS Trigger: AGAGAGAACTGGACAAGCTGGATATCCCAAAGAGCATGGCACTGGCCCACCACATTGATTACATTGCGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | ACTCAGGCATCTTACCAAGACTCCCAGTGTGTTAGCTaGTTCTTGGTTAGCACCCGGCCAGCGCAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: TQASYQDSQCVS*FLVSTRPAQCN Trigger: ATTACATTGCGCTGGCCGGGTGCTAACCAAGAAGCAGCTAACACACTGGGAGTCTTGGTAAGATGCCTGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | CATTGTCTGTCTCTCTTGGTCATGGGAGATGCAAGATaGAGTAATTGGCTCTTTGCTGTGGACAGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: HCLSLLVMGDAR*SNWLFAVDRRP Trigger: GGGCCTCCTGTCCACAGCAAAGAGCCAATTACTGCATCTTGCATCTCCCATGACCAAGAGAGACAGACAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | TCTCTCTTGGTCATGGGAGATGCAAGATGCAGTAATTaGCTCTTTGCTGTGGACAGGAGGCCCAGTATGCTC | + |
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Preference number: 6 (lower is better) Translates to: SLLVMGDARCSN*LFAVDRRPSML Trigger: GAGCATACTGGGCCTCCTGTCCACAGCAAAGAGCCAATTACTGCATCTTGCATCTCCCATGACCAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CAA 72 bp | TGGTCATGGGAGATGCAAGATGCAGTAATTGGCTCTTaGCTGTGGACAGGAGGCCCAGTATGCTCCTGGTTA | + |
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Preference number: 6 (lower is better) Translates to: WSWEMQDAVIGS*LWTGGPVCSWL Trigger: TAACCAGGAGCATACTGGGCCTCCTGTCCACAGCAAAGAGCCAATTACTGCATCTTGCATCTCCCATGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | ATGCTCTTTCCTCGTAGGAATAGAAAAGAATGCACTTaGCATCTCAGTGGGGCAGAGCACACACCTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: MLFPRRNRKECT*HLSGAEHTPEA Trigger: AGCCTCAGGTGTGTGCTCTGCCCCACTGAGATGGCAAGTGCATTCTTTTCTATTCCTACGAGGAAAGAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | GGCACGTCTTACGTGGTGGTGGGTGAGAAAGACAAGTaGAAGCAGGGGAATTGCCAGACACTTATAAAACCA | + |
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Preference number: 6 (lower is better) Translates to: GTSYVVVGEKDK*KQGNCQTLIKP Trigger: TGGTTTTATAAGTGTCTGGCAATTCCCCTGCTTGCACTTGTCTTTCTCACCCACCACCACGTAAGACGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | CATCTTACCAAGACTCCCAGTGTGTTAGCTGCTTCTTaGTTAGCACCCGGCCAGCGCAATGTAATCAATGTG | + |
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Preference number: 6 (lower is better) Translates to: HLTKTPSVLAAS*LAPGQRNVINV Trigger: CACATTGATTACATTGCGCTGGCCGGGTGCTAACCAAGAAGCAGCTAACACACTGGGAGTCTTGGTAAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CAA 72 bp | GCATCTTACCAAGACTCCCAGTGTGTTAGCTGCTTCTaGGTTAGCACCCGGCCAGCGCAATGTAATCAATGT | + |
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Preference number: 6 (lower is better) Translates to: ASYQDSQCVSCF*VSTRPAQCNQC Trigger: ACATTGATTACATTGCGCTGGCCGGGTGCTAACCAAGAAGCAGCTAACACACTGGGAGTCTTGGTAAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | TTTCGGATGCTCTTTCCTCGTAGGAATAGAAAAGAATaGACTTGCCATCTCAGTGGGGCAGAGCACACACCT | + |
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Preference number: 6 (lower is better) Translates to: FRMLFPRRNRKE*TCHLSGAEHTP Trigger: AGGTGTGTGCTCTGCCCCACTGAGATGGCAAGTGCATTCTTTTCTATTCCTACGAGGAAAGAGCATCCGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | TTAGTGGCAGTTCCCAGAATCTTTGTAGGATTTGTCTaGCAGCTGCAGGCACTCAGGCATCTTACCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: LVAVPRIFVGFV*QLQALRHLTKT Trigger: AGTCTTGGTAAGATGCCTGAGTGCCTGCAGCTGGCAGACAAATCCTACAAAGATTCTGGGAACTGCCACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | AGAAGGCGTACTGGCATTGTCTGTCTCTCTTGGTCATaGGAGATGCAAGATGCAGTAATTGGCTCTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RRRTGIVCLSWS*EMQDAVIGSLL Trigger: CAGCAAAGAGCCAATTACTGCATCTTGCATCTCCCATGACCAAGAGAGACAGACAATGCCAGTACGCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS CCA 72 bp | ATGCTCTTTGGGATATCCAGCTTGTCCAGTTCTCTCTaGGCTTCCTTAGGGCATAGAATACATGGTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: MLFGISSLSSSL*ASLGHRIHGLL Trigger: TAATAAACCATGTATTCTATGCCCTAAGGAAGCCCAGAGAGAACTGGACAAGCTGGATATCCCAAAGAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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| CDS GCA 72 bp | TGTTATTCATCCTATGTGAAGGCAGGCTCTTTCGGATaGTCTTTCCTCGTAGGAATAGAAAAGAATGCACTT | + |
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Preference number: 6 (lower is better) Translates to: CYSSYVKAGSFG*SFLVGIEKNAL Trigger: AAGTGCATTCTTTTCTATTCCTACGAGGAAAGAGCATCCGAAAGAGCCTGCCTTCACATAGGATGAATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419628.1 |
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