Pregenerated sensors for LINC01639 (Homo sapiens)
Ensembl gene IDs: ENSG00000236117Ensembl transcript IDs: ENST00000450750.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCACAGCCTGAGGCGTCAGACAAGCCTGGGCCCTCTATGTGGTTGTaGGCAGGGTGCCGGCCTGCTGCCTCACCTGGGCCAAGGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AQPEASDKPGPSMWL*AGCRPAASPGPRSS Trigger: AGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTCAGGCTGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 90 bp | GAGAGAGCACAGCCTGAGGCGTCAGACAAGCCTGGGCCCTCTATGTaGTTGTGGGCAGGGTGCCGGCCTGCTGCCTCACCTGGGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: ERAQPEASDKPGPSM*LWAGCRPAASPGPR Trigger: CCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTCAGGCTGTGCTCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 90 bp | CAAGCCTGGGCCCTCTATGTGGTTGTGGGCAGGGTGCCGGCCTGCTaGCTCACCTGGGCCAAGGTCCTCTTGGAGCAGTCTGAACATTCC | + |
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Preference number: 5 (lower is better) Translates to: QAWALYVVVGRVPAC*LTWAKVLLEQSEHS Trigger: GGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 90 bp | GCCCTCTATGTGGTTGTGGGCAGGGTGCCGGCCTGCTGCCTCACCTaGGCCAAGGTCCTCTTGGAGCAGTCTGAACATTCCACTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: ALYVVVGRVPACCLT*AKVLLEQSEHSTPA Trigger: GGCAGGAGTGGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 90 bp | TGGGCAGGGTGCCGGCCTGCTGCCTCACCTGGGCCAAGGTCCTCTTaGAGCAGTCTGAACATTCCACTCCTGCCCTTGCACTCTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: WAGCRPAASPGPRSS*SSLNIPLLPLHSYS Trigger: TGAATAAGAGTGCAAGGGCAGGAGTGGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 90 bp | AGCCAAGTCCTGTTGCTGAAATGCCACATGGGAAAATGGGCTCCATaGTCACCACCCATCCCGCGAACGAGCGAAGCAGGTTACACCAGA | + |
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Preference number: 5 (lower is better) Translates to: SQVLLLKCHMGKWAP*SPPIPRTSEAGYTR Trigger: TCTGGTGTAACCTGCTTCGCTCGTTCGCGGGATGGGTGGTGAGCATGGAGCCCATTTTCCCATGTGGCATTTCAGCAACAGGACTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 90 bp | AAAGGGACCAGCCTGTGCAAAGGCTCAGAGGCTCCAAAGTGCATGTaGGATATCCCCTGGCCAAGAAACTCACCTTCCAGAAAGGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: KGTSLCKGSEAPKCM*DIPWPRNSPSRKAS Trigger: GGACGCCTTTCTGGAAGGTGAGTTTCTTGGCCAGGGGATATCGCACATGCACTTTGGAGCCTCTGAGCCTTTGCACAGGCTGGTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 90 bp | CCAGGCAAAGGGACCAGCCTGTGCAAAGGCTCAGAGGCTCCAAAGTaGATGTGCGATATCCCCTGGCCAAGAAACTCACCTTCCAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PGKGTSLCKGSEAPK*MCDIPWPRNSPSRK Trigger: CTTTCTGGAAGGTGAGTTTCTTGGCCAGGGGATATCGCACATGCACTTTGGAGCCTCTGAGCCTTTGCACAGGCTGGTCCCTTTGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 90 bp | CACAATCCCACACTGCTAAACCAGCCAGGAGATGGCTCGTTCTGCTaGAAAACATTTCCTAGGCGCCTACTACGTGCTGGAGGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: HNPTLLNQPGDGSFC*KTFPRRLLRAGGQG Trigger: GCCTTGGCCTCCAGCACGTAGTAGGCGCCTAGGAAATGTTTTCCAGCAGAACGAGCCATCTCCTGGCTGGTTTAGCAGTGTGGGATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 90 bp | CCACACAATCCCACACTGCTAAACCAGCCAGGAGATGGCTCGTTCTaGTGGAAAACATTTCCTAGGCGCCTACTACGTGCTGGAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: PHNPTLLNQPGDGSF*WKTFPRRLLRAGGQ Trigger: TTGGCCTCCAGCACGTAGTAGGCGCCTAGGAAATGTTTTCCAGCAGAACGAGCCATCTCCTGGCTGGTTTAGCAGTGTGGGATTGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 90 bp | GTTTCAAATAGCCAAGTCCTGTTGCTGAAATGCCACATGGGAAAATaGGCTCCATGCTCACCACCCATCCCGCGAACGAGCGAAGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: VSNSQVLLLKCHMGK*APCSPPIPRTSEAG Trigger: ACCTGCTTCGCTCGTTCGCGGGATGGGTGGTGAGCATGGAGCCCATTTTCCCATGTGGCATTTCAGCAACAGGACTTGGCTATTTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | GAGGCGTCAGACAAGCCTGGGCCCTCTATGTGGTTGTaGGCAGGGTGCCGGCCTGCTGCCTCACCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: EASDKPGPSMWL*AGCRPAASPGP Trigger: TGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CAA 72 bp | CCTGAGGCGTCAGACAAGCCTGGGCCCTCTATGTGGTaGTGGGCAGGGTGCCGGCCTGCTGCCTCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: PEASDKPGPSMW*WAGCRPAASPG Trigger: CCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CAA 90 bp | AGAGCACAGCCTGAGGCGTCAGACAAGCCTGGGCCCTCTATGTGGTaGTGGGCAGGGTGCCGGCCTGCTGCCTCACCTGGGCCAAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RAQPEASDKPGPSMW*WAGCRPAASPGPRS Trigger: GGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTCAGGCTGTGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | CAGCCTGAGGCGTCAGACAAGCCTGGGCCCTCTATGTaGTTGTGGGCAGGGTGCCGGCCTGCTGCCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: QPEASDKPGPSM*LWAGCRPAASP Trigger: AGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGCCCAGGCTTGTCTGACGCCTCAGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 72 bp | GCCCTCTATGTGGTTGTGGGCAGGGTGCCGGCCTGCTaGCTCACCTGGGCCAAGGTCCTCTTGGAGCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: ALYVVVGRVPAC*LTWAKVLLEQS Trigger: AGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCACATAGAGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | GTGGTTGTGGGCAGGGTGCCGGCCTGCTGCCTCACCTaGGCCAAGGTCCTCTTGGAGCAGTCTGAACATTCC | + |
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Preference number: 6 (lower is better) Translates to: VVVGRVPACCLT*AKVLLEQSEHS Trigger: GGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAGCAGGCCGGCACCCTGCCCACAACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 72 bp | ATGGGAGAGGGGCAGCCAGGCAAAGGGACCAGCCTGTaGAAAGGCTCAGAGGCTCCAAAGTGCATGTGCGAT | + |
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Preference number: 6 (lower is better) Translates to: MGEGQPGKGTSL*KGSEAPKCMCD Trigger: ATCGCACATGCACTTTGGAGCCTCTGAGCCTTTGCACAGGCTGGTCCCTTTGCCTGGCTGCCCCTCTCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 72 bp | CTGTTGCTGAAATGCCACATGGGAAAATGGGCTCCATaGTCACCACCCATCCCGCGAACGAGCGAAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LLLKCHMGKWAP*SPPIPRTSEAG Trigger: ACCTGCTTCGCTCGTTCGCGGGATGGGTGGTGAGCATGGAGCCCATTTTCCCATGTGGCATTTCAGCAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | GGCAGTGTGTGTGCTGCAGAAGAATCTAGGGATAAATaGGAGAGGGGCAGCCAGGCAAAGGGACCAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSVCAAEESRDK*ERGSQAKGPAC Trigger: ACAGGCTGGTCCCTTTGCCTGGCTGCCCCTCTCCCATTTATCCCTAGATTCTTCTGCAGCACACACACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS TCA 72 bp | CTGCCTCACCTGGGCCAAGGTCCTCTTGGAGCAGTCTaGACATTCCACTCCTGCCCTTGCACTCTTATTCAG | + |
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Preference number: 6 (lower is better) Translates to: LPHLGQGPLGAV*TFHSCPCTLIQ Trigger: CTGAATAAGAGTGCAAGGGCAGGAGTGGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCCAGGTGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 72 bp | AGCCTGTGCAAAGGCTCAGAGGCTCCAAAGTGCATGTaGGATATCCCCTGGCCAAGAAACTCACCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SLCKGSEAPKCM*DIPWPRNSPSR Trigger: TCTGGAAGGTGAGTTTCTTGGCCAGGGGATATCGCACATGCACTTTGGAGCCTCTGAGCCTTTGCACAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS GCA 72 bp | CCCACACTGCTAAACCAGCCAGGAGATGGCTCGTTCTaGTGGAAAACATTTCCTAGGCGCCTACTACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: PTLLNQPGDGSF*WKTFPRRLLRA Trigger: AGCACGTAGTAGGCGCCTAGGAAATGTTTTCCAGCAGAACGAGCCATCTCCTGGCTGGTTTAGCAGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CAA 90 bp | GGGCCAAGGTCCTCTTGGAGCAGTCTGAACATTCCACTCCTGCCCTaGCACTCTTATTCAGCTGTGACAGACCAGAAACTGGCCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: GPRSSWSSLNIPLLP*HSYSAVTDQKLAQN Trigger: ATTCTGGGCCAGTTTCTGGTCTGTCACAGCTGAATAAGAGTGCAAGGGCAGGAGTGGAATGTTCAGACTGCTCCAAGAGGACCTTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | ACACTGCTAAACCAGCCAGGAGATGGCTCGTTCTGCTaGAAAACATTTCCTAGGCGCCTACTACGTGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TLLNQPGDGSFC*KTFPRRLLRAG Trigger: TCCAGCACGTAGTAGGCGCCTAGGAAATGTTTTCCAGCAGAACGAGCCATCTCCTGGCTGGTTTAGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS CCA 72 bp | ACTGGAAGGAACTTTAGGCAATCAAGAAACCGACGCTaGAGAAGAAACTCTGAAGTTCAGCCAGGCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: TGRNFRQSRNRR*RRNSEVQPGLR Trigger: CCGGAGGCCTGGCTGAACTTCAGAGTTTCTTCTCCAGCGTCGGTTTCTTGATTGCCTAAAGTTCCTTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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| CDS TCA 72 bp | ACATTCCACTCCTGCCCTTGCACTCTTATTCAGCTGTaGCAGACCAGAAACTGGCCCAGAATCCCAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: TFHSCPCTLIQL*QTRNWPRIPEY Trigger: ATACTCTGGGATTCTGGGCCAGTTTCTGGTCTGTCACAGCTGAATAAGAGTGCAAGGGCAGGAGTGGAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450750.1 |
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