Pregenerated sensors for LINC01612 (Homo sapiens)
Ensembl gene IDs: ENSG00000250266Ensembl transcript IDs: ENST00000504509.2, ENST00000654867.1, ENST00000657650.1, ENST00000660060.1, ENST00000665566.1, ENST00000667527.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTCCTTCCAGCTCTCTTGCAGAGACCTCTTGGACAGAATTTGAATaGCCCCAGAACAGCTCTCTCCTTTGGGGCTCACCTCTGGCCCAC | + |
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Preference number: 5 (lower is better) Translates to: GPSSSLAETSWTEFE*PQNSSLLWGSPLAH Trigger: GTGGGCCAGAGGTGAGCCCCAAAGGAGAGAGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CCA 90 bp | AGGCTGCTCATGTGTGGTCCTTCCAGCTCTCTTGCAGAGACCTCTTaGACAGAATTTGAATGGCCCCAGAACAGCTCTCTCCTTTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: RLLMCGPSSSLAETS*TEFEWPQNSSLLWG Trigger: GCCCCAAAGGAGAGAGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACCACACATGAGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CCA 90 bp | GAGAGAATAGTCCGTGCTCCTGTGAAACAGAGGAAAACCTCCTCCTaGTCTTGTTCATCCTGTTTCCATGTTGGCTGCCAAAGAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: ERIVRAPVKQRKTSS*SCSSCFHVGCQRGR Trigger: CCTTCCTCTTTGGCAGCCAACATGGAAACAGGATGAACAAGACCAGGAGGAGGTTTTCCTCTGTTTCACAGGAGCACGGACTATTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CCA 90 bp | GTTGGCTGCCAAAGAGGAAGGCCTATTCTCTCCTGGTCTCTTTCATaGTTCGAGGAGGAAACTAAATCCTGTTGCAGTGGTCCCTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: VGCQRGRPILSWSLS*FEEETKSCCSGPFY Trigger: ATAGAAGGGACCACTGCAACAGGATTTAGTTTCCTCCTCGAACCATGAAAGAGACCAGGAGAGAATAGGCCTTCCTCTTTGGCAGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS TCA 90 bp | CCTTCCTCACATTGGAATACGGAGGACCTCTGTAAGGCCAACATATaGTGCAGTGCTAAGTGTTCCATGTCTCTGGGTAATTCTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: PSSHWNTEDLCKANI*CSAKCSMSLGNSGV Trigger: CACACCAGAATTACCCAGAGACATGGAACACTTAGCACTGCATCATATGTTGGCCTTACAGAGGTCCTCCGTATTCCAATGTGAGGAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CCA 90 bp | TCCTGTTTCCATGTTGGCTGCCAAAGAGGAAGGCCTATTCTCTCCTaGTCTCTTTCATGGTTCGAGGAGGAAACTAAATCCTGTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: SCFHVGCQRGRPILS*SLSWFEEETKSCCS Trigger: ACTGCAACAGGATTTAGTTTCCTCCTCGAACCATGAAAGAGACCAGGAGAGAATAGGCCTTCCTCTTTGGCAGCCAACATGGAAACAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS TCA 90 bp | AGAAGGAAAATGATGGTAATTGGAAGAGGGTCCCAGGGGCACTTCTaGGTCTGGCCATGTTCTATTTCTGTGGTGTCCTTCAAGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: RRKMMVIGRGSQGHF*VWPCSISVVSFKQS Trigger: ACTTTGCTTGAAGGACACCACAGAAATAGAACATGGCCAGACTCAGAAGTGCCCCTGGGACCCTCTTCCAATTACCATCATTTTCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000504509.2 ENST00000665566.1 |
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| CDS GCA 90 bp | TATGATGCAGTGCTAAGTGTTCCATGTCTCTGGGTAATTCTGGTGTaGAGAGGGCTTCTTTTCCCCAACCCTCACCCGTATTGTTCAATT | + |
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Preference number: 5 (lower is better) Translates to: YDAVLSVPCLWVILV*RGLLFPNPHPYCSI Trigger: AATTGAACAATACGGGTGAGGGTTGGGGAAAAGAAGCCCTCTGCACACCAGAATTACCCAGAGACATGGAACACTTAGCACTGCATCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS TCA 90 bp | ATCCCCATCATAGAGGTCACAATTAACAAAGTTCAGAAGAGAAGGTaGTCTGTAAGTGCCCCAATGCAGATGGGTAGGGATCTGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: IPIIEVTINKVQKRR*SVSAPMQMGRDLWS Trigger: TGACCACAGATCCCTACCCATCTGCATTGGGGCACTTACAGATCACCTTCTCTTCTGAACTTTGTTAATTGTGACCTCTATGATGGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657650.1 |
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| CDS GCA 90 bp | TCTCCAGCTCACTCTTTCCCTGTGTTAGAAACAAATGCTGGGTGCTaGAAAGAAAACCAGAACTTAGGCAGAAAATTTCTCAGCAACGCA | + |
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Preference number: 5 (lower is better) Translates to: SPAHSFPVLETNAGC*KENQNLGRKFLSNA Trigger: TGCGTTGCTGAGAAATTTTCTGCCTAAGTTCTGGTTTTCTTTGCAGCACCCAGCATTTGTTTCTAACACAGGGAAAGAGTGAGCTGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654867.1 ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 90 bp | TTCCAAAATCTTGGTGTAGTTGCTCTCCTGCTTGTATGTAAAAAGTaGCACATTCAACATGAGAGAATAGTCCGTGCTCCTAGACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: FQNLGVVALLLVCKK*HIQHERIVRAPRQQ Trigger: CTGCTGTCTAGGAGCACGGACTATTCTCTCATGTTGAATGTGGCACTTTTTACATACAAGCAGGAGAGCAACTACACCAAGATTTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000504509.2 ENST00000660060.1 |
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| CDS GCA 90 bp | TTCCAAAATCTTGGTGTAGTTGCTCTCCTGCTTGTATGTAAAAAGTaGCACATTCAACATGAGAGAATAGTCCGTGCTCCTCACCCGTAT | + |
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Preference number: 5 (lower is better) Translates to: FQNLGVVALLLVCKK*HIQHERIVRAPHPY Trigger: ATACGGGTGAGGAGCACGGACTATTCTCTCATGTTGAATGTGGCACTTTTTACATACAAGCAGGAGAGCAACTACACCAAGATTTTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 90 bp | TTGAGAGGTTTCTCCAGCTCACTCTTTCCCTGTGTTAGAAACAAATaGTGGGTGCTGCAAAGAAAACCAGAACTTAGGCAGAAAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LRGFSSSLFPCVRNK*WVLQRKPELRQKIS Trigger: AGAAATTTTCTGCCTAAGTTCTGGTTTTCTTTGCAGCACCCAGCATTTGTTTCTAACACAGGGAAAGAGTGAGCTGGAGAAACCTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000654867.1 ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 90 bp | TTCCAAAATCTTGGTGTAGTTGCTCTCCTGCTTGTATGTAAAAAGTaGCACATTCAACATGAGAGAATAGTCCGTGCTCCTGTGAAACAG | + |
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Preference number: 5 (lower is better) Translates to: FQNLGVVALLLVCKK*HIQHERIVRAPVKQ Trigger: CTGTTTCACAGGAGCACGGACTATTCTCTCATGTTGAATGTGGCACTTTTTACATACAAGCAGGAGAGCAACTACACCAAGATTTTGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS TCA 90 bp | GTCATTATCACATCGTTTCTACAGCCTCTTATCTCATTGGCTAAGTaGTCACATGCCAATCATCGCTGTGAGGTACTTTTCTTCTTTATC | + |
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Preference number: 5 (lower is better) Translates to: VIITSFLQPLISLAK*SHANHRCEVLFFFI Trigger: GATAAAGAAGAAAAGTACCTCACAGCGATGATTGGCATGTGATCACTTAGCCAATGAGATAAGAGGCTGTAGAAACGATGTGATAATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 90 bp | GAGGAAAGCTCAATGTTTACTTCATATCCACTTCTAATATGGACCTaGAACTCAGGAGATGTCATTATCACATCGTTTCTACAGCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: EESSMFTSYPLLIWT*NSGDVIITSFLQPL Trigger: AAGAGGCTGTAGAAACGATGTGATAATGACATCTCCTGAGTTGCAGGTCCATATTAGAAGTGGATATGAAGTAAACATTGAGCTTTCCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS CCA 90 bp | AAATGTGAGGAAAGCTCAATGTTTACTTCATATCCACTTCTAATATaGACCTGCAACTCAGGAGATGTCATTATCACATCGTTTCTACAG | + |
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Preference number: 5 (lower is better) Translates to: KCEESSMFTSYPLLI*TCNSGDVIITSFLQ Trigger: CTGTAGAAACGATGTGATAATGACATCTCCTGAGTTGCAGGTCCATATTAGAAGTGGATATGAAGTAAACATTGAGCTTTCCTCACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 72 bp | GGCTCACCTCTGGCCCACAAGGAACACTCCAATGCATaGTCGCCCCCACCACTGGCACCCAATTCATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSPLAHKEHSNA*SPPPLAPNSSA Trigger: GGCAGATGAATTGGGTGCCAGTGGTGGGGGCGAGCATGCATTGGAGTGTTCCTTGTGGGCCAGAGGTGAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS GCA 72 bp | TTGGGGCTCACCTCTGGCCCACAAGGAACACTCCAATaGATGCTCGCCCCCACCACTGGCACCCAATTCATC | + |
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Preference number: 6 (lower is better) Translates to: LGLTSGPQGTLQ*MLAPTTGTQFI Trigger: GATGAATTGGGTGCCAGTGGTGGGGGCGAGCATGCATTGGAGTGTTCCTTGTGGGCCAGAGGTGAGCCCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CAA 90 bp | TGTGTGGTCCTTCCAGCTCTCTTGCAGAGACCTCTTGGACAGAATTaGAATGGCCCCAGAACAGCTCTCTCCTTTGGGGCTCACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CVVLPALLQRPLGQN*NGPRTALSFGAHLW Trigger: CCAGAGGTGAGCCCCAAAGGAGAGAGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CAA 72 bp | CAGACAGGCTGCTCATGTGTGGTCCTTCCAGCTCTCTaGCAGAGACCTCTTGGACAGAATTTGAATGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QTGCSCVVLPAL*QRPLGQNLNGP Trigger: GGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACCACACATGAGCAGCCTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CCA 72 bp | AGCTCTCTTGCAGAGACCTCTTGGACAGAATTTGAATaGCCCCAGAACAGCTCTCTCCTTTGGGGCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: SSLAETSWTEFE*PQNSSLLWGSP Trigger: AGGTGAGCCCCAAAGGAGAGAGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CCA 72 bp | GTCCGTGCTCCTGTGAAACAGAGGAAAACCTCCTCCTaGTCTTGTTCATCCTGTTTCCATGTTGGCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VRAPVKQRKTSS*SCSSCFHVGCQ Trigger: TTGGCAGCCAACATGGAAACAGGATGAACAAGACCAGGAGGAGGTTTTCCTCTGTTTCACAGGAGCACGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CCA 72 bp | ATGTGTGGTCCTTCCAGCTCTCTTGCAGAGACCTCTTaGACAGAATTTGAATGGCCCCAGAACAGCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MCGPSSSLAETS*TEFEWPQNSSL Trigger: GAGAGAGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACCACACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS CAA 90 bp | GATTTTTCTCAGACAGGCTGCTCATGTGTGGTCCTTCCAGCTCTCTaGCAGAGACCTCTTGGACAGAATTTGAATGGCCCCAGAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: DFSQTGCSCVVLPAL*QRPLGQNLNGPRTA Trigger: AGCTGTTCTGGGGCCATTCAAATTCTGTCCAAGAGGTCTCTGCAAGAGAGCTGGAAGGACCACACATGAGCAGCCTGTCTGAGAAAAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660060.1 |
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| CDS TCA 72 bp | ATGATGGTAATTGGAAGAGGGTCCCAGGGGCACTTCTaGGTCTGGCCATGTTCTATTTCTGTGGTGTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: MMVIGRGSQGHF*VWPCSISVVSF Trigger: GAAGGACACCACAGAAATAGAACATGGCCAGACTCAGAAGTGCCCCTGGGACCCTCTTCCAATTACCATCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000504509.2 ENST00000665566.1 |
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| CDS CAA 90 bp | AATAGTCCGTGCTCCTGTGAAACAGAGGAAAACCTCCTCCTGGTCTaGTTCATCCTGTTTCCATGTTGGCTGCCAAAGAGGAAGGCCTAT | + |
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Preference number: 6 (lower is better) Translates to: NSPCSCETEENLLLV*FILFPCWLPKRKAY Trigger: ATAGGCCTTCCTCTTTGGCAGCCAACATGGAAACAGGATGAACAAGACCAGGAGGAGGTTTTCCTCTGTTTCACAGGAGCACGGACTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CCA 72 bp | CATGTTGGCTGCCAAAGAGGAAGGCCTATTCTCTCCTaGTCTCTTTCATGGTTCGAGGAGGAAACTAAATCC | + |
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Preference number: 6 (lower is better) Translates to: HVGCQRGRPILS*SLSWFEEETKS Trigger: GGATTTAGTTTCCTCCTCGAACCATGAAAGAGACCAGGAGAGAATAGGCCTTCCTCTTTGGCAGCCAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CAA 90 bp | GTGCAGAGGGCTTCTTTTCCCCAACCCTCACCCGTATTGTTCAATTaGCTTTACGCTTTCTTGAATTTGAGAGGTTTCTCCAGCTCACTC | + |
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Preference number: 6 (lower is better) Translates to: VQRASFPQPSPVLFN*LYAFLNLRGFSSSL Trigger: GAGTGAGCTGGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGGTGAGGGTTGGGGAAAAGAAGCCCTCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS TCA 72 bp | CATTGGAATACGGAGGACCTCTGTAAGGCCAACATATaGTGCAGTGCTAAGTGTTCCATGTCTCTGGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: HWNTEDLCKANI*CSAKCSMSLGN Trigger: ATTACCCAGAGACATGGAACACTTAGCACTGCATCATATGTTGGCCTTACAGAGGTCCTCCGTATTCCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CAA 72 bp | AGAGTGGCTACAATCTTTCACAGCATGGAAGGCCACTaGTTTCAAAGAGTCAAAGGGTCAGCCGAGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVATIFHSMEGH*FQRVKGSAEFF Trigger: AAAGAACTCGGCTGACCCTTTGACTCTTTGAAACAAGTGGCCTTCCATGCTGTGAAAGATTGTAGCCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000667527.1 |
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| CDS TCA 72 bp | ACATCGTTTCTACAGCCTCTTATCTCATTGGCTAAGTaGTCACATGCCAATCATCGCTGTGAGGTACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: TSFLQPLISLAK*SHANHRCEVLF Trigger: GAAAAGTACCTCACAGCGATGATTGGCATGTGATCACTTAGCCAATGAGATAAGAGGCTGTAGAAACGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS TCA 72 bp | ATAGAGGTCACAATTAACAAAGTTCAGAAGAGAAGGTaGTCTGTAAGTGCCCCAATGCAGATGGGTAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: IEVTINKVQKRR*SVSAPMQMGRD Trigger: ATCCCTACCCATCTGCATTGGGGCACTTACAGATCACCTTCTCTTCTGAACTTTGTTAATTGTGACCTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657650.1 |
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| CDS CCA 72 bp | TCATTATCACATCGTTTCTACAGCCTCTTATCTCATTaGCTAAGTGATCACATGCCAATCATCGCTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SLSHRFYSLLSH*LSDHMPIIAVR Trigger: CCTCACAGCGATGATTGGCATGTGATCACTTAGCCAATGAGATAAGAGGCTGTAGAAACGATGTGATAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS CCA 72 bp | AAAATGCAATGGACACCATTCCAATGTCTCAAAGAGTaGCTACAATCTTTCACAGCATGGAAGGCCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: KMQWTPFQCLKE*LQSFTAWKATC Trigger: ACAAGTGGCCTTCCATGCTGTGAAAGATTGTAGCCACTCTTTGAGACATTGGAATGGTGTCCATTGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000667527.1 |
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| CDS CAA 72 bp | GCTTCTTTTCCCCAACCCTCACCCGTATTGTTCAATTaGCTTTACGCTTTCTTGAATTTGAGAGGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASFPQPSPVLFN*LYAFLNLRGFS Trigger: GGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGGTGAGGGTTGGGGAAAAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CAA 72 bp | GAGAATAGTCCGTGCTCCTCACCCGTATTGTTCAATTaGCTTTACGCTTTCTTGAATTTGAGAGGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ENSPCSSPVLFN*LYAFLNLRGFS Trigger: GGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGGTGAGGAGCACGGACTATTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS CAA 72 bp | CCCGTATTGTTCAATTTGCTTTACGCTTTCTTGAATTaGAGAGGTTTCTCCAGCTCACTCTTTCCCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: PVLFNLLYAFLN*RGFSSSLFPCV Trigger: AACACAGGGAAAGAGTGAGCTGGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654867.1 ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS CAA 90 bp | ATGTCTCAAAGAGTGGCTACAATCTTTCACAGCATGGAAGGCCACTaGTTTCAAAGAGTCAAAGGGTCAGCCGAGTTCTTTATTTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: MSQRVATIFHSMEGH*FQRVKGSAEFFISK Trigger: TTTAGAAATAAAGAACTCGGCTGACCCTTTGACTCTTTGAAACAAGTGGCCTTCCATGCTGTGAAAGATTGTAGCCACTCTTTGAGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000667527.1 |
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| CDS CAA 90 bp | CAACCCTCACCCGTATTGTTCAATTTGCTTTACGCTTTCTTGAATTaGAGAGGTTTCTCCAGCTCACTCTTTCCCTGTGTTAGAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: QPSPVLFNLLYAFLN*RGFSSSLFPCVRNK Trigger: TTTGTTTCTAACACAGGGAAAGAGTGAGCTGGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGGTGAGGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654867.1 |
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| CDS CAA 90 bp | TGCTCCTCACCCGTATTGTTCAATTTGCTTTACGCTTTCTTGAATTaGAGAGGTTTCTCCAGCTCACTCTTTCCCTGTGTTAGAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: CSSPVLFNLLYAFLN*RGFSSSLFPCVRNK Trigger: TTTGTTTCTAACACAGGGAAAGAGTGAGCTGGAGAAACCTCTCAAATTCAAGAAAGCGTAAAGCAAATTGAACAATACGGGTGAGGAGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657650.1 ENST00000665566.1 ENST00000667527.1 |
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| CDS GCA 72 bp | TCAATGTTTACTTCATATCCACTTCTAATATGGACCTaGAACTCAGGAGATGTCATTATCACATCGTTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SMFTSYPLLIWT*NSGDVIITSFL Trigger: TAGAAACGATGTGATAATGACATCTCCTGAGTTGCAGGTCCATATTAGAAGTGGATATGAAGTAAACATTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000504509.2 ENST00000654867.1 ENST00000657650.1 ENST00000660060.1 ENST00000665566.1 ENST00000667527.1 |
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