Pregenerated sensors for LINC01608 (Homo sapiens)
Ensembl gene IDs: ENSG00000253877Ensembl transcript IDs: ENST00000523557.2, ENST00000524283.5, ENST00000653924.1, ENST00000657323.1, ENST00000657532.1, ENST00000658028.1, ENST00000658081.1, ENST00000658119.1, ENST00000658508.1, ENST00000658597.1, ENST00000658733.1, ENST00000659834.1, ENST00000660015.1, ENST00000660667.1, ENST00000661561.1, ENST00000661954.1, ENST00000662310.1, ENST00000663408.1, ENST00000663666.1, ENST00000664704.1, ENST00000665011.1, ENST00000665803.1, ENST00000667145.1, ENST00000668858.1, ENST00000668936.1, ENST00000668956.1, ENST00000669698.1, ENST00000669744.1, ENST00000669893.1, ENST00000669997.1, ENST00000670392.1, ENST00000671489.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAGTTGTGTGGGGCCCAGCAGGACCTCTCTCTCTTCGGAACAATaGCATCAGGTGGATTCCAGGCAACTCCCTATACCAGTCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: GSCVGPSRTSLSSEQ*HQVDSRQLPIPVSV Trigger: CACTGAGACTGGTATAGGGAGTTGCCTGGAATCCACCTGATGGCATTGTTCCGAAGAGAGAGAGGTCCTGCTGGGCCCCACACAACTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 90 bp | TGGGGCCCAGCAGGACCTCTCTCTCTTCGGAACAATGCCATCAGGTaGATTCCAGGCAACTCCCTATACCAGTCTCAGTGCTTGCAAGCG | + |
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Preference number: 5 (lower is better) Translates to: WGPAGPLSLRNNAIR*IPGNSLYQSQCLQA Trigger: CGCTTGCAAGCACTGAGACTGGTATAGGGAGTTGCCTGGAATCCACCTGATGGCATTGTTCCGAAGAGAGAGAGGTCCTGCTGGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS GCA 90 bp | AATGCCATCAGGTGGATTCCAGGCAACTCCCTATACCAGTCTCAGTaGTTGCAAGCGCTGAGGGCCTCTCCCATGGCTTATACCAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: NAIRWIPGNSLYQSQ*LQALRASPMAYTSY Trigger: ATAGCTGGTATAAGCCATGGGAGAGGCCCTCAGCGCTTGCAAGCACTGAGACTGGTATAGGGAGTTGCCTGGAATCCACCTGATGGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 90 bp | CACTTAACAGAGCAGCGGATGCAGAAAAAGAAACGTGCCCGGAATTaGTTGGTTCTTGGTCTCACTGACTTCGGGAATGAAGCCGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: HLTEQRMQKKKRARN*LVLGLTDFGNEAAG Trigger: GCCCGCGGCTTCATTCCCGAAGTCAGTGAGACCAAGAACCAACCAATTCCGGGCACGTTTCTTTTTCTGCATCCGCTGCTCTGTTAAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS TCA 90 bp | GAGGTCCAGTGTGAATGTCAAACTAAATGTGCTGTTTGGCTGGCTTaGAAAACAGGCTCATGGGCCTATGATCATGTGCTGCTTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: EVQCECQTKCAVWLA*KTGSWAYDHVLLLL Trigger: TAAAAGAAGCAGCACATGATCATAGGCCCATGAGCCTGTTTTTCAAGCCAGCCAAACAGCACATTTAGTTTGACATTCACACTGGACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000658597.1 ENST00000662310.1 ENST00000665803.1 ENST00000668858.1 ENST00000669698.1 ENST00000670392.1 ENST00000671489.1 |
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| CDS TCA 90 bp | GAACAACCAGTTCTCATGGGAACAAGAAAACTCACTCTGCAAGAATaGCACCAAGTCATTCATGAGGGATGTTCCTCCACAATCCAAACA | + |
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Preference number: 5 (lower is better) Translates to: EQPVLMGTRKLTLQE*HQVIHEGCSSTIQT Trigger: TGTTTGGATTGTGGAGGAACATCCCTCATGAATGACTTGGTGTCATTCTTGCAGAGTGAGTTTTCTTGTTCCCATGAGAACTGGTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 90 bp | GTCTTTTGGAACAACCAGTTCTCATGGGAACAAGAAAACTCACTCTaGAAGAATGACACCAAGTCATTCATGAGGGATGTTCCTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: VFWNNQFSWEQENSL*KNDTKSFMRDVPPQ Trigger: TTGTGGAGGAACATCCCTCATGAATGACTTGGTGTCATTCTTGCAGAGTGAGTTTTCTTGTTCCCATGAGAACTGGTTGTTCCAAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 90 bp | CTTGGTTGTGAGATTGTGAACCCAAAGTTCAAGGTCCCAAAGTTTTaGTGTAGTATGGATGGCAAGGACAGTCTTTCTCTGATGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LGCEIVNPKFKVPKF*CSMDGKDSLSLMFS Trigger: TGAGAACATCAGAGAAAGACTGTCCTTGCCATCCATACTACAGCAAAACTTTGGGACCTTGAACTTTGGGTTCACAATCTCACAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000660015.1 ENST00000661561.1 ENST00000661954.1 ENST00000669893.1 |
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| CDS GCA 90 bp | CCATTTCTCAGTGGGAATGCTTTCAACTTTTCCCTGTTCAGGAAATaGTTAAGGTTTCCAATGGGTGTACTGTTCCAAAATTGTAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: PFLSGNAFNFSLFRK*LRFPMGVLFQNCRG Trigger: CCCTCTACAATTTTGGAACAGTACACCCATTGGAAACCTTAAGCATTTCCTGAACAGGGAAAAGTTGAAAGCATTCCCACTGAGAAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 90 bp | TTTCCCAGTGCACTTACCTATAGGTACAGGCACACCTCTAGATATTaGAGGTTCAATTTCAGACCACAGCAACAAAGTAAATACTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: FPSALTYRYRHTSRY*RFNFRPQQQSKYCC Trigger: ACAGCAGTATTTACTTTGTTGCTGTGGTCTGAAATTGAACCTGCAATATCTAGAGGTGTGCCTGTACCTATAGGTAAGTGCACTGGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661954.1 |
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| CDS CCA 90 bp | ATGTTCTTGGGAAAAGCTGTTCACATCAAGGATGCCATCTTCTTCTaGGGAGAAACTTTCCTGGTTAGCTTTACCTTAAGGTTTCCAATG | + |
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Preference number: 5 (lower is better) Translates to: MFLGKAVHIKDAIFF*GETFLVSFTLRFPM Trigger: CATTGGAAACCTTAAGGTAAAGCTAACCAGGAAAGTTTCTCCCCAGAAGAAGATGGCATCCTTGATGTGAACAGCTTTTCCCAAGAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000660015.1 ENST00000669893.1 |
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| CDS TCA 90 bp | GTAACAAACCTGTACATGGGCCCCCTGAACCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTTCCTTCAGAGTTTTCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: VTNLYMGPLNLIPAI*HSGIDKASFRVFYL Trigger: GAGATAGAAAACTCTGAAGGAAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGGTTCAGGGGGCCCATGTACAGGTTTGTTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000524283.5 |
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| CDS TCA 90 bp | TCCCAAAGTTTTGCTGTAGTATGGATGGCAAGGACAGTCTTTCTCTaGTGTTCTCAGAAGATCCAATCTTCAGGTTCTTATACCAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: SQSFAVVWMARTVFL*CSQKIQSSGSYTSY Trigger: ATAGCTGGTATAAGAACCTGAAGATTGGATCTTCTGAGAACATCAGAGAAAGACTGTCCTTGCCATCCATACTACAGCAAAACTTTGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000660015.1 ENST00000661561.1 ENST00000661954.1 ENST00000669893.1 |
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| CDS TCA 90 bp | TTTTCTTGCCATTTCAACAACGTTTGCCGTGTCTTCATCGGGAGTTaGTTCCATCTCAAGAAACCAGTTTCTTTCCTCATCCATAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: FSCHFNNVCRVFIGS*FHLKKPVSFLIHKK Trigger: TTTCTTATGGATGAGGAAAGAAACTGGTTTCTTGAGATGGAATCAACTCCCGATGAAGACACGGCAAACGTTGTTGAAATGGCAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS TCA 90 bp | TTTTCCCGTGCTGTTCTCATGATGGTGAATAAGTCTCATGAGATCTaGTGGTTTTATAAGGAGGAGTTTACCTGCATAAGCTTTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: FSRAVLMMVNKSHEI*WFYKEEFTCISFLC Trigger: GCAAAGAAAGCTTATGCAGGTAAACTCCTCCTTATAAAACCATCAGATCTCATGAGACTTATTCACCATCATGAGAACAGCACGGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660667.1 |
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| CDS GCA 90 bp | AGATATTGCAGGTTCAATTTCAGACCACAGCAACAAAGTAAATACTaGTGTAAAGCAAGTGACATAAATTGTGTGGTTTCCCAGTGCATT | + |
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Preference number: 5 (lower is better) Translates to: RYCRFNFRPQQQSKY*CKASDINCVVSQCI Trigger: AATGCACTGGGAAACCACACAATTTATGTCACTTGCTTTACAGCAGTATTTACTTTGTTGCTGTGGTCTGAAATTGAACCTGCAATATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658028.1 ENST00000661954.1 |
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| CDS CCA 90 bp | AAAAATAAACATACTCTTAGCATTCAGTCCACCAAGTGTGCTCTATaGTGTCTACTCAAAGGAGTTGCAAACTTATGTTCACACAAAACC | + |
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Preference number: 5 (lower is better) Translates to: KNKHTLSIQSTKCAL*CLLKGVANLCSHKT Trigger: GGTTTTGTGTGAACATAAGTTTGCAACTCCTTTGAGTAGACACCATAGAGCACACTTGGTGGACTGAATGCTAAGAGTATGTTTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669997.1 |
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| CDS TCA 90 bp | CCTTTACCAGTTGAGGAACTTTTTAGAGGAGTCTTTAGAGTTTTCTaGTATATGATCATATCACCAGCAAATAGCAACAGTTTGACTTCC | + |
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Preference number: 5 (lower is better) Translates to: PLPVEELFRGVFRVF*YMIISPANSNSLTS Trigger: GGAAGTCAAACTGTTGCTATTTGCTGGTGATATGATCATATATCAGAAAACTCTAAAGACTCCTCTAAAAAGTTCCTCAACTGGTAAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000658028.1 ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 ENST00000667145.1 |
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| CDS TCA 90 bp | GATGTTCTCAGAAGATCCAATCTTCAGGTTCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTTCCTTCAGAGTTTTCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: DVLRRSNLQVLIPAI*HSGIDKASFRVFYL Trigger: GAGATAGAAAACTCTGAAGGAAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGAACCTGAAGATTGGATCTTCTGAGAACATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658081.1 ENST00000669893.1 |
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| CDS TCA 90 bp | TGCTTTCAACTTTTCCCTGTTCAGGAAATGCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTTCCTTCAGAGTTTTCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: CFQLFPVQEMLIPAI*HSGIDKASFRVFYL Trigger: GAGATAGAAAACTCTGAAGGAAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGCATTTCCTGAACAGGGAAAAGTTGAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667145.1 |
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| CDS CCA 90 bp | ATCTACAACCATCTGATGTTTGACAAACCTGTCAAAAATAAGAAATaGGGAAAGGATTCCCTATTTAATAAATGCTGCTGGGAAAACTGG | + |
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Preference number: 5 (lower is better) Translates to: IYNHLMFDKPVKNKK*GKDSLFNKCCWENW Trigger: CCAGTTTTCCCAGCAGCATTTATTAAATAGGGAATCCTTTCCCCATTTCTTATTTTTGACAGGTTTGTCAAACATCAGATGGTTGTAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 90 bp | TCTTTTGAACAGAATAATTGCTTTAGAGGGGACTGTAAGGAAGACTaGAAAGGGAACAATCAAACTATTATATTACAGCTTTCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SFEQNNCFRGDCKED*KGNNQTIILQLSCW Trigger: CCAGCATGAAAGCTGTAATATAATAGTTTGATTGTTCCCTTTCCAGTCTTCCTTACAGTCCCCTCTAAAGCAATTATTCTGTTCAAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000657323.1 ENST00000658597.1 ENST00000661561.1 ENST00000668936.1 |
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| CDS TCA 90 bp | AGAGAAACTGTGGAAATGAATGAAGACAACCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTTCCTTCAGAGTTTTCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: RETVEMNEDNLIPAI*HSGIDKASFRVFYL Trigger: GAGATAGAAAACTCTGAAGGAAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGGTTGTCTTCATTCATTTCCACAGTTTCTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665803.1 ENST00000669698.1 |
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| CDS TCA 90 bp | CTTAATTCTTGGCCATGGATGATAGGTAATCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTTCCTTCAGAGTTTTCTATCTC | + |
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Preference number: 5 (lower is better) Translates to: LNSWPWMIGNLIPAI*HSGIDKASFRVFYL Trigger: GAGATAGAAAACTCTGAAGGAAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGATTACCTATCATCCATGGCCAAGAATTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668956.1 |
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| CDS CCA 72 bp | GTTAGGCCCCAGGGCACGGTGCAGTCTGGTGGAGTCTaGGCTCTAAAATGGCAGCATGCTTCAGGTGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VRPQGTVQSGGV*ALKWQHASGAW Trigger: CCAAGCACCTGAAGCATGCTGCCATTTTAGAGCCCAGACTCCACCAGACTGCACCGTGCCCTGGGGCCTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 90 bp | GGAGTCTGGGCTCTAAAATGGCAGCATGCTTCAGGTGCTTGGCTCTaGGGAGTTGTGTGGGGCCCAGCAGGACCTCTCTCTCTTCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GVWALKWQHASGAWL*GVVWGPAGPLSLRN Trigger: GTTCCGAAGAGAGAGAGGTCCTGCTGGGCCCCACACAACTCCCAAGAGCCAAGCACCTGAAGCATGCTGCCATTTTAGAGCCCAGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 72 bp | CTTGGAGTGGATGTGGTGAGATGTCAGCAGGGATCTTaGGATGTGGAGATGCAGGGGCTGTTAGGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGVDVVRCQQGS*DVEMQGLLGPR Trigger: CCTGGGGCCTAACAGCCCCTGCATCTCCACATCCCAAGATCCCTGCTGACATCTCACCACATCCACTCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 72 bp | AATGGCAGCATGCTTCAGGTGCTTGGCTCTTGGGAGTaGTGTGGGGCCCAGCAGGACCTCTCTCTCTTCGGA | + |
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Preference number: 6 (lower is better) Translates to: NGSMLQVLGSWE*CGAQQDLSLFG Trigger: TCCGAAGAGAGAGAGGTCCTGCTGGGCCCCACACAACTCCCAAGAGCCAAGCACCTGAAGCATGCTGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 72 bp | AGTCTGGGCTCTAAAATGGCAGCATGCTTCAGGTGCTaGGCTCTTGGGAGTTGTGTGGGGCCCAGCAGGACC | + |
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Preference number: 6 (lower is better) Translates to: SLGSKMAACFRC*ALGSCVGPSRT Trigger: GGTCCTGCTGGGCCCCACACAACTCCCAAGAGCCAAGCACCTGAAGCATGCTGCCATTTTAGAGCCCAGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 90 bp | TGTTCCTTCCAGTGGGCTCGTGGTCTCGCTGGCTCAGGAGTGAAGTaGCAGACCTTCCCGGTGAGTGTTACAGCTCATGAAGGCAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CSFQWARGLAGSGVK*QTFPVSVTAHEGSV Trigger: CACACTGCCTTCATGAGCTGTAACACTCACCGGGAAGGTCTGCAACTTCACTCCTGAGCCAGCGAGACCACGAGCCCACTGGAAGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS GCA 72 bp | GCAGTCTGGTGGAGTCTGGGCTCTAAAATGGCAGCATaGTTCAGGTGCTTGGCTCTTGGGAGTTGTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: AVWWSLGSKMAA*FRCLALGSCVG Trigger: CCCCACACAACTCCCAAGAGCCAAGCACCTGAAGCATGCTGCCATTTTAGAGCCCAGACTCCACCAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 72 bp | CAGCATGCTTCAGGTGCTTGGCTCTTGGGAGTTGTGTaGGGCCCAGCAGGACCTCTCTCTCTTCGGAACAAT | + |
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Preference number: 6 (lower is better) Translates to: QHASGAWLLGVV*GPAGPLSLRNN Trigger: ATTGTTCCGAAGAGAGAGAGGTCCTGCTGGGCCCCACACAACTCCCAAGAGCCAAGCACCTGAAGCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 72 bp | GGCACGGTGCAGTCTGGTGGAGTCTGGGCTCTAAAATaGCAGCATGCTTCAGGTGCTTGGCTCTTGGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GTVQSGGVWALK*QHASGAWLLGV Trigger: AACTCCCAAGAGCCAAGCACCTGAAGCATGCTGCCATTTTAGAGCCCAGACTCCACCAGACTGCACCGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 72 bp | CAGTGGGCTCGTGGTCTCGCTGGCTCAGGAGTGAAGTaGCAGACCTTCCCGGTGAGTGTTACAGCTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: QWARGLAGSGVK*QTFPVSVTAHE Trigger: TTCATGAGCTGTAACACTCACCGGGAAGGTCTGCAACTTCACTCCTGAGCCAGCGAGACCACGAGCCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS CAA 90 bp | AGCAGCGGATGCAGAAAAAGAAACGTGCCCGGAATTGGTTGGTTCTaGGTCTCACTGACTTCGGGAATGAAGCCGCGGGCCCTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSGCRKRNVPGIGWF*VSLTSGMKPRALSV Trigger: CACAGAGAGGGCCCGCGGCTTCATTCCCGAAGTCAGTGAGACCAAGAACCAACCAATTCCGGGCACGTTTCTTTTTCTGCATCCGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS CAA 90 bp | GCCATCAGGTGGATTCCAGGCAACTCCCTATACCAGTCTCAGTGCTaGCAAGCGCTGAGGGCCTCTCCCATGGCTTATACCAGCTATATG | + |
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Preference number: 6 (lower is better) Translates to: AIRWIPGNSLYQSQC*QALRASPMAYTSYM Trigger: CATATAGCTGGTATAAGCCATGGGAGAGGCCCTCAGCGCTTGCAAGCACTGAGACTGGTATAGGGAGTTGCCTGGAATCCACCTGATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS TCA 72 bp | CCCAACCACTTACAAGGCTGTGTCAGGAGAATCACTTaGACCCGGGAGACAGAGGCTGCCATGAGCCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: PNHLQGCVRRIT*TRETEAAMSQD Trigger: ATCTTGGCTCATGGCAGCCTCTGTCTCCCGGGTTCAAGTGATTCTCCTGACACAGCCTTGTAAGTGGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653924.1 ENST00000657323.1 ENST00000658508.1 ENST00000659834.1 ENST00000663408.1 |
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| CDS TCA 72 bp | GGCATTGTGATGCTGCAGCTCTTGGAGTGGATGTGGTaGGATGTCAGCAGGGATCTTGGGATGTGGAGATGC | + |
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Preference number: 6 (lower is better) Translates to: GIVMLQLLEWMW*DVSRDLGMWRC Trigger: GCATCTCCACATCCCAAGATCCCTGCTGACATCTCACCACATCCACTCCAAGAGCTGCAGCATCACAATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 72 bp | TCCCAACCACTTACAAGGCTGTGTCAGGAGAATCACTaGAACCCGGGAGACAGAGGCTGCCATGAGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SQPLTRLCQENH*NPGDRGCHEPR Trigger: TCTTGGCTCATGGCAGCCTCTGTCTCCCGGGTTCAAGTGATTCTCCTGACACAGCCTTGTAAGTGGTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000653924.1 ENST00000657323.1 ENST00000658508.1 ENST00000659834.1 ENST00000663408.1 |
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| CDS CAA 90 bp | TTAACAGAGCAGCGGATGCAGAAAAAGAAACGTGCCCGGAATTGGTaGGTTCTTGGTCTCACTGACTTCGGGAATGAAGCCGCGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LTEQRMQKKKRARNW*VLGLTDFGNEAAGP Trigger: AGGGCCCGCGGCTTCATTCCCGAAGTCAGTGAGACCAAGAACCAACCAATTCCGGGCACGTTTCTTTTTCTGCATCCGCTGCTCTGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS TCA 72 bp | CTCTGCTTAGTATGTAACGCAGCTGCAGTGCTCAGTTaGGCTGGCATTGTGATGCTGCAGCTCTTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LCLVCNAAAVLS*AGIVMLQLLEW Trigger: CCACTCCAAGAGCTGCAGCATCACAATGCCAGCTCAACTGAGCACTGCAGCTGCGTTACATACTAAGCAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CCA 72 bp | CTGTATCTGGTGAGGGTCTCAAGCTGCTTTTACTCATaGTGGAAGGGGAGCTTGTCTGCAGAGATCACATGG | + |
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Preference number: 6 (lower is better) Translates to: LYLVRVSSCFYS*WKGSLSAEITW Trigger: CCATGTGATCTCTGCAGACAAGCTCCCCTTCCACCATGAGTAAAAGCAGCTTGAGACCCTCACCAGATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CCA 72 bp | AGCGGATGCAGAAAAAGAAACGTGCCCGGAATTGGTTaGTTCTTGGTCTCACTGACTTCGGGAATGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SGCRKRNVPGIG*FLVSLTSGMKP Trigger: CGGCTTCATTCCCGAAGTCAGTGAGACCAAGAACCAACCAATTCCGGGCACGTTTCTTTTTCTGCATCCGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS CAA 72 bp | CAGCGGATGCAGAAAAAGAAACGTGCCCGGAATTGGTaGGTTCTTGGTCTCACTGACTTCGGGAATGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QRMQKKKRARNW*VLGLTDFGNEA Trigger: GGCTTCATTCCCGAAGTCAGTGAGACCAAGAACCAACCAATTCCGGGCACGTTTCTTTTTCTGCATCCGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669893.1 |
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| CDS CAA 72 bp | GTCTCAAGCTGCTTTTACTCATGGTGGAAGGGGAGCTaGTCTGCAGAGATCACATGGCAAGAGAGGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VSSCFYSWWKGS*SAEITWQERKQ Trigger: TTGCTTCCTCTCTTGCCATGTGATCTCTGCAGACAAGCTCCCCTTCCACCATGAGTAAAAGCAGCTTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CCA 72 bp | AGGGATGTTCCTCCACAATCCAAACACCTCCTACACTaGAGATCAAGTTTCAACATAAGACTTGGCAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RDVPPQSKHLLH*RSSFNIRLGRA Trigger: GGCCCTGCCAAGTCTTATGTTGAAACTTGATCTCCAGTGTAGGAGGTGTTTGGATTGTGGAGGAACATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CAA 90 bp | CATAGGAGAGAAGGCGTCAATGGTCTGAGGGTTGCCACAGACATCTaGTTCATTTTGTGTCTGCATAAGCTTTCTTTGCCTGCTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: HRREGVNGLRVATDI*FILCLHKLSLPAAI Trigger: GATGGCAGCAGGCAAAGAAAGCTTATGCAGACACAAAATGAACAAGATGTCTGTGGCAACCCTCAGACCATTGACGCCTTCTCTCCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000523557.2 ENST00000524283.5 ENST00000653924.1 ENST00000658119.1 ENST00000668956.1 ENST00000669698.1 ENST00000669893.1 ENST00000671489.1 |
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| CDS CAA 90 bp | GAGCATCTGACATGTGAGGGTTCAGTCAACGTCCAAATGTGTGATTaGATACATAGGAGAGAAGGCGTCAATGGTCTGAGGGTTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: EHLTCEGSVNVQMCD*IHRREGVNGLRVAT Trigger: TGTGGCAACCCTCAGACCATTGACGCCTTCTCTCCTATGTATCAAATCACACATTTGGACGTTGACTGAACCCTCACATGTCAGATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000523557.2 ENST00000524283.5 ENST00000653924.1 ENST00000657323.1 ENST00000657532.1 ENST00000658081.1 ENST00000658119.1 ENST00000663408.1 ENST00000663666.1 ENST00000665803.1 ENST00000667145.1 ENST00000668858.1 ENST00000668956.1 ENST00000669698.1 ENST00000669744.1 ENST00000669893.1 ENST00000669997.1 ENST00000671489.1 |
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| CDS CAA 90 bp | GAAGGCGTCAATGGTCTGAGGGTTGCCACAGACATCTTGTTCATTTaGTGTCTGCATAAGCTTTCTTTGCCTGCTGCCATCCACATAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EGVNGLRVATDILFI*CLHKLSLPAAIHIR Trigger: TCTTATGTGGATGGCAGCAGGCAAAGAAAGCTTATGCAGACACAAAATGAACAAGATGTCTGTGGCAACCCTCAGACCATTGACGCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000523557.2 ENST00000524283.5 ENST00000653924.1 ENST00000658119.1 ENST00000668956.1 ENST00000669698.1 ENST00000669893.1 ENST00000671489.1 |
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| CDS TCA 72 bp | CAGCTCCAGGTTCAGGTTCAGATACAGGCACACCTCTaGGATATTGATAGTTCAGTTCCAGACCCCTACAAT | + |
|
Preference number: 6 (lower is better) Translates to: QLQVQVQIQAHL*DIDSSVPDPYN Trigger: ATTGTAGGGGTCTGGAACTGAACTATCAATATCTCAGAGGTGTGCCTGTATCTGAACCTGAACCTGGAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661954.1 |
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| CDS CAA 72 bp | AATTCTCTGCACCTCAGCTTGACCATGTGTTCTGCCTaGGCTAATGTAGGGACCCAGGTAACAAATATCACA | + |
|
Preference number: 6 (lower is better) Translates to: NSLHLSLTMCSA*ANVGTQVTNIT Trigger: TGTGATATTTGTTACCTGGGTCCCTACATTAGCCAAGGCAGAACACATGGTCAAGCTGAGGTGCAGAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668936.1 |
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| CDS CAA 72 bp | GGCCCTGGAGTTTCACTCCTCCTTGTATTTATACTCTaGTGTAGTCAAGGTGTAATTCTCTGCACCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGVSLLLVFIL*CSQGVILCTSA Trigger: AGCTGAGGTGCAGAGAATTACACCTTGACTACACAAGAGTATAAATACAAGGAGGAGTGAAACTCCAGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668936.1 |
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| CDS CAA 72 bp | TTCCAAGGTTACAGAGCTCCTGGTAGGGCCAGGATATaGACTCAGGCATTTTTCCTGCAGAACTTACAATCT | + |
|
Preference number: 6 (lower is better) Translates to: FQGYRAPGRARI*TQAFFLQNLQS Trigger: AGATTGTAAGTTCTGCAGGAAAAATGCCTGAGTCAATATCCTGGCCCTACCAGGAGCTCTGTAACCTTGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000668936.1 |
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| CDS TCA 72 bp | CGCTATTTCCACCAAAGCTTCAGTTACTTCCGTGACTaGAGTTTTGAAACCCTCAAAGTCATCCATGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RYFHQSFSYFRD*SFETLKVIHEG Trigger: ACCCTCATGGATGACTTTGAGGGTTTCAAAACTTCAGTCACGGAAGTAACTGAAGCTTTGGTGGAAATAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS TCA 72 bp | GTTCTCATGGGAACAAGAAAACTCACTCTGCAAGAATaGCACCAAGTCATTCATGAGGGATGTTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VLMGTRKLTLQE*HQVIHEGCSST Trigger: TGTGGAGGAACATCCCTCATGAATGACTTGGTGTCATTCTTGCAGAGTGAGTTTTCTTGTTCCCATGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 72 bp | GAGATTGTGAACCCAAAGTTCAAGGTCCCAAAGTTTTaGTGTAGTATGGATGGCAAGGACAGTCTTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EIVNPKFKVPKF*CSMDGKDSLSL Trigger: CAGAGAAAGACTGTCCTTGCCATCCATACTACAGCAAAACTTTGGGACCTTGAACTTTGGGTTCACAATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000660015.1 ENST00000661561.1 ENST00000661954.1 ENST00000669893.1 |
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| CDS GCA 72 bp | TGGGCCTCCTTGTCTTGTTCCATTTCTCAGTGGGAATaGTTTCAACTTTTCCCTGTTCAGGAAATGCTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: WASLSCSISQWE*FQLFPVQEMLK Trigger: CTTAAGCATTTCCTGAACAGGGAAAAGTTGAAAGCATTCCCACTGAGAAATGGAACAAGACAAGGAGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CCA 72 bp | GAGGAGGTAACAGTCTTTTGGAACAACCAGTTCTCATaGGAACAAGAAAACTCACTCTGCAAGAATGACACC | + |
|
Preference number: 6 (lower is better) Translates to: EEVTVFWNNQFS*EQENSLCKNDT Trigger: GGTGTCATTCTTGCAGAGTGAGTTTTCTTGTTCCCATGAGAACTGGTTGTTCCAAAAGACTGTTACCTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CCA 72 bp | TCCAGTGTGAATGTCAAACTAAATGTGCTGTTTGGCTaGCTTGAAAAACAGGCTCATGGGCCTATGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: SSVNVKLNVLFG*LEKQAHGPMIM Trigger: CATGATCATAGGCCCATGAGCCTGTTTTTCAAGCCAGCCAAACAGCACATTTAGTTTGACATTCACACTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000658028.1 ENST00000658597.1 ENST00000662310.1 ENST00000665803.1 ENST00000668858.1 ENST00000669698.1 ENST00000670392.1 ENST00000671489.1 |
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| CDS CAA 72 bp | TGTCGAACAGAAGTGGTAAGAGTGGGCCTCCTTGTCTaGTTCCATTTCTCAGTGGGAATGCTTTCAACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRTEVVRVGLLV*FHFSVGMLSTF Trigger: AAAAGTTGAAAGCATTCCCACTGAGAAATGGAACAAGACAAGGAGGCCCACTCTTACCACTTCTGTTCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000658028.1 ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 ENST00000667145.1 |
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| CDS CAA 72 bp | CCACCAAGTGTGCTCTATGGTGTCTACTCAAAGGAGTaGCAAACTTATGTTCACACAAAACCTGCACATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PPSVLYGVYSKE*QTYVHTKPAHG Trigger: TCCATGTGCAGGTTTTGTGTGAACATAAGTTTGCAACTCCTTTGAGTAGACACCATAGAGCACACTTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669997.1 |
||
| CDS CAA 90 bp | CTAGTATTATGTCGAACAGAAGTGGTAAGAGTGGGCCTCCTTGTCTaGTTCCATTTCTCAGTGGGAATGCTTTCAACTTTTCCCTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LVLCRTEVVRVGLLV*FHFSVGMLSTFPCS Trigger: TGAACAGGGAAAAGTTGAAAGCATTCCCACTGAGAAATGGAACAAGACAAGGAGGCCCACTCTTACCACTTCTGTTCGACATAATACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658028.1 ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 ENST00000667145.1 |
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| CDS TCA 72 bp | CATGCTCCCTTTTACTATACCTCAATATTGAGCATCTaGCATGTGAGGGTTCAGTCAACGTCCAAATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HAPFYYTSILSI*HVRVQSTSKCV Trigger: CACACATTTGGACGTTGACTGAACCCTCACATGTCAGATGCTCAATATTGAGGTATAGTAAAAGGGAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000524283.5 ENST00000653924.1 ENST00000657323.1 ENST00000658081.1 ENST00000665803.1 ENST00000667145.1 ENST00000668956.1 ENST00000669698.1 ENST00000669744.1 ENST00000669893.1 |
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| CDS TCA 72 bp | GCGATTCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAGCAATCCCATTACTGGGTATATACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AIPQGSRTRNTI*PSNPITGYIPK Trigger: TTTGGGTATATACCCAGTAATGGGATTGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGAATCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS GCA 72 bp | TGGGCCTCCTTGTCTTGTTCCATTTCTCAGTGGGAATaGTTTCAACTTTTCCCTGTTCAGGAAATGCTTATA | + |
|
Preference number: 6 (lower is better) Translates to: WASLSCSISQWE*FQLFPVQEMLI Trigger: TATAAGCATTTCCTGAACAGGGAAAAGTTGAAAGCATTCCCACTGAGAAATGGAACAAGACAAGGAGGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658028.1 ENST00000667145.1 |
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| CDS GCA 72 bp | CACCAAGTGTGCTCTATGGTGTCTACTCAAAGGAGTTaGAAACTTATGTTCACACAAAACCTGCACATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: HQVCSMVSTQRS*KLMFTQNLHMD Trigger: ATCCATGTGCAGGTTTTGTGTGAACATAAGTTTGCAACTCCTTTGAGTAGACACCATAGAGCACACTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669997.1 |
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| CDS CCA 72 bp | AAAAGAAGCCCAATTCCACCAAGGATGCCAAGCAGATaGGAACCAATACTAAAACCAATGACTGAACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KRSPIPPRMPSR*EPILKPMTELG Trigger: TCCAAGTTCAGTCATTGGTTTTAGTATTGGTTCCCATCTGCTTGGCATCCTTGGTGGAATTGGGCTTCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000658028.1 ENST00000658597.1 ENST00000662310.1 ENST00000665803.1 ENST00000668858.1 ENST00000669698.1 ENST00000670392.1 ENST00000671489.1 |
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| CDS CCA 72 bp | CTAGAACACAGACACCACAACATTCTAGCAAGGATGTaGAACAAAAGCATCACTTATTGCTGGTCGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LEHRHHNILARM*NKSITYCWSQC Trigger: ACATTGCGACCAGCAATAAGTGATGCTTTTGTTCCACATCCTTGCTAGAATGTTGTGGTGTCTGTGTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669997.1 |
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| CDS CAA 72 bp | TCCACCAAAGCTTCAGTTACTTCCGTGACTGAAGTTTaGAAACCCTCAAAGTCATCCATGAGGGTTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: STKASVTSVTEV*KPSKSSMRVEI Trigger: GATTTCAACCCTCATGGATGACTTTGAGGGTTTCAAAACTTCAGTCACGGAAGTAACTGAAGCTTTGGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CAA 90 bp | CTCGCTATTTCCACCAAAGCTTCAGTTACTTCCGTGACTGAAGTTTaGAAACCCTCAAAGTCATCCATGAGGGTTGAAATCAACTACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LAISTKASVTSVTEV*KPSKSSMRVEINYF Trigger: GAAGTAGTTGATTTCAACCCTCATGGATGACTTTGAGGGTTTCAAAACTTCAGTCACGGAAGTAACTGAAGCTTTGGTGGAAATAGCGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 72 bp | AACAACCAGTTCTCATGGGAACAAGAAAACTCACTCTaGAAGAATGACACCAAGTCATTCATGAGGGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: NNQFSWEQENSL*KNDTKSFMRDV Trigger: AACATCCCTCATGAATGACTTGGTGTCATTCTTGCAGAGTGAGTTTTCTTGTTCCCATGAGAACTGGTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS GCA 72 bp | GCACTTACCTATAGGTACAGGCACACCTCTAGATATTaGAGGTTCAATTTCAGACCACAGCAACAAAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: ALTYRYRHTSRY*RFNFRPQQQSK Trigger: TTTACTTTGTTGCTGTGGTCTGAAATTGAACCTGCAATATCTAGAGGTGTGCCTGTACCTATAGGTAAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661954.1 |
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| CDS TCA 72 bp | TTTGCAGCTATTGTGAAAGGGGTTGAGTTCTTGATTTaGTTCTCAGCTTGGTTGCTATTGGTGTATAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FAAIVKGVEFLI*FSAWLLLVYSR Trigger: TCTGCTATACACCAATAGCAACCAAGCTGAGAATCAAATCAAGAACTCAACCCCTTTCACAATAGCTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658028.1 ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 ENST00000667145.1 |
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| CDS TCA 72 bp | TTTGCTGTAGTATGGATGGCAAGGACAGTCTTTCTCTaGTGTTCTCAGAAGATCCAATCTTCAGGTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: FAVVWMARTVFL*CSQKIQSSGSY Trigger: ATAAGAACCTGAAGATTGGATCTTCTGAGAACATCAGAGAAAGACTGTCCTTGCCATCCATACTACAGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000660015.1 ENST00000661561.1 ENST00000661954.1 ENST00000669893.1 |
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| CDS TCA 72 bp | AAAATTGTAGAGGGATCCTTCTTGGTTGTGAGATTGTaGACCCAAAGTTCAAGGTCCCAAAGTTTTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: KIVEGSFLVVRL*TQSSRSQSFAV Trigger: TACAGCAAAACTTTGGGACCTTGAACTTTGGGTTCACAATCTCACAACCAAGAAGGATCCCTCTACAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000658081.1 ENST00000658119.1 ENST00000660015.1 ENST00000661561.1 ENST00000661954.1 ENST00000669893.1 |
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| CDS TCA 72 bp | GCTGTTCTCATGATGGTGAATAAGTCTCATGAGATCTaGTGGTTTTATAAGGAGGAGTTTACCTGCATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVLMMVNKSHEI*WFYKEEFTCIS Trigger: GCTTATGCAGGTAAACTCCTCCTTATAAAACCATCAGATCTCATGAGACTTATTCACCATCATGAGAACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660667.1 |
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| CDS GCA 72 bp | AAGACAACCTATAGGTACAGGCACACCTCTAGATATTaGAGGTTCAATTTCAGACCACAGCAACAAAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: KTTYRYRHTSRY*RFNFRPQQQSK Trigger: TTTACTTTGTTGCTGTGGTCTGAAATTGAACCTGCAATATCTAGAGGTGTGCCTGTACCTATAGGTTGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658028.1 |
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| CDS CCA 72 bp | TTTTCAGTTTGTAAGACATCAATGCATACAGAACCATaGCCAGGCAGGGCAGAAAGGACTTTTAATTACACA | + |
|
Preference number: 6 (lower is better) Translates to: FSVCKTSMHTEP*PGRAERTFNYT Trigger: TGTGTAATTAAAAGTCCTTTCTGCCCTGCCTGGCCATGGTTCTGTATGCATTGATGTCTTACAAACTGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000523557.2 ENST00000653924.1 ENST00000657323.1 ENST00000657532.1 ENST00000658508.1 ENST00000658733.1 ENST00000659834.1 ENST00000663408.1 ENST00000665011.1 ENST00000669744.1 |
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| CDS CAA 72 bp | AATATTCCAAGTCTTTTCTTGCCATTTCAACAACGTTaGCCGTGTCTTCATCGGGAGTTGATTCCATCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: NIPSLFLPFQQR*PCLHRELIPSQ Trigger: TTGAGATGGAATCAACTCCCGATGAAGACACGGCAAACGTTGTTGAAATGGCAAGAAAAGACTTGGAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CAA 90 bp | CTATATTACCAACACAGGCTATTTCTAACAACACAAGTTGTCAGTTaGAGAGGTACTTTTCAAGAAAAGAGAACGGGACCTCCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LYYQHRLFLTTQVVS*RGTFQEKRTGPPPF Trigger: AAAAGGAGGAGGTCCCGTTCTCTTTTCTTGAAAAGTACCTCTCAAACTGACAACTTGTGTTGTTAGAAATAGCCTGTGTTGGTAATATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664704.1 |
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| CDS CAA 72 bp | GCTTGGTTGCTATTGGTGTATAGCAGAGCAATGGATTaGTGTACATTAATTTTGTATCCTGAAACTCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AWLLLVYSRAMD*CTLILYPETLL Trigger: CAGGAGAGTTTCAGGATACAAAATTAATGTACACAAATCCATTGCTCTGCTATACACCAATAGCAACCAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000658028.1 ENST00000658081.1 ENST00000658119.1 ENST00000661561.1 ENST00000661954.1 ENST00000667145.1 |
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| CDS GCA 72 bp | AGGTTCAATTTCAGACCACAGCAACAAAGTAAATACTaGTGTAAAGCAAGTGACATAAATTGTGTGGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFNFRPQQQSKY*CKASDINCVVS Trigger: GGAAACCACACAATTTATGTCACTTGCTTTACAGCAGTATTTACTTTGTTGCTGTGGTCTGAAATTGAACCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658028.1 ENST00000661954.1 |
||
| CDS TCA 72 bp | CTTTTCCCTGTTCAGGAAATGCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTGTAAACACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LFPVQEMLIPAI*HSGIDKAVNTV Trigger: TACAGTGTTTACAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGCATTTCCTGAACAGGGAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658028.1 |
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| CDS TCA 72 bp | ATAAGAAACAATTCCTCATCCATTCAAGTTTTGTCATaGGATTGCACTAATTCATTCACATCTTCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: IRNNSSSIQVLS*DCTNSFTSSGS Trigger: GGAGCCTGAAGATGTGAATGAATTAGTGCAATCTCATGACAAAACTTGAATGGATGAGGAATTGTTTCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
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| CDS CCA 72 bp | CAGAATAATTGCTTTAGAGGGGACTGTAAGGAAGACTaGAAAGGGAACAATCAAACTATTATATTACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QNNCFRGDCKED*KGNNQTIILQL Trigger: AAGCTGTAATATAATAGTTTGATTGTTCCCTTTCCAGTCTTCCTTACAGTCCCCTCTAAAGCAATTATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657323.1 ENST00000658597.1 ENST00000661561.1 ENST00000668936.1 |
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| CDS CAA 72 bp | TTTCAACTAAGTTTATGTAATATTCCAAGTCTTTTCTaGCCATTTCAACAACGTTTGCCGTGTCTTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: FQLSLCNIPSLF*PFQQRLPCLHR Trigger: CCGATGAAGACACGGCAAACGTTGTTGAAATGGCAAGAAAAGACTTGGAATATTACATAAACTTAGTTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000658028.1 ENST00000661561.1 ENST00000661954.1 |
||
| CDS TCA 72 bp | AGAAGATCCAATCTTCAGGTTCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTGTAAACACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRSNLQVLIPAI*HSGIDKAVNTV Trigger: TACAGTGTTTACAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGAACCTGAAGATTGGATCTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000660015.1 ENST00000661561.1 |
||
| CDS TCA 72 bp | GTGGAAATGAATGAAGACAACCTTATACCAGCTATATaGCATTCTGGAATAGATAAAGCTGTAAACACTGTA | + |
|
Preference number: 6 (lower is better) Translates to: VEMNEDNLIPAI*HSGIDKAVNTV Trigger: TACAGTGTTTACAGCTTTATCTATTCCAGAATGTCATATAGCTGGTATAAGGTTGTCTTCATTCATTTCCAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670392.1 |
||
| CDS CAA 72 bp | CCTTCAGAGTTTTCTATCTCCAATGCAGAATCTTATTaGACCTTATATTATTACAGCTTTGTGTTGAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSEFSISNAESY*TLYYYSFVLKA Trigger: CGCTTTCAACACAAAGCTGTAATAATATAAGGTCAAATAAGATTCTGCATTGGAGATAGAAAACTCTGAAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000524283.5 ENST00000653924.1 ENST00000657323.1 ENST00000658081.1 ENST00000659834.1 ENST00000663666.1 ENST00000665803.1 ENST00000667145.1 ENST00000668956.1 ENST00000669698.1 ENST00000669744.1 ENST00000669893.1 |
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