Pregenerated sensors for LINC01606 (Homo sapiens)
Ensembl gene IDs: ENSG00000253301, ENSG00000284367Ensembl transcript IDs: ENST00000517611.1, ENST00000518556.5, ENST00000519160.5, ENST00000519241.6, ENST00000519314.5, ENST00000520929.1, ENST00000521132.1, ENST00000521653.6, ENST00000523341.5, ENST00000631378.1, ENST00000632183.1, ENST00000632290.1, ENST00000632572.1, ENST00000633454.1, ENST00000633554.1, ENST00000634122.1, ENST00000640454.2, ENST00000640576.3, ENST00000654770.1, ENST00000655011.1, ENST00000655105.1, ENST00000656635.2, ENST00000656851.2, ENST00000657454.1, ENST00000659585.1, ENST00000661539.1, ENST00000661856.1, ENST00000662595.2, ENST00000667730.1, ENST00000668087.1, ENST00000669200.1, ENST00000671715.1, ENST00000671848.1, ENST00000671914.1, ENST00000672028.1, ENST00000672510.1, ENST00000672668.1, ENST00000672730.1, ENST00000672794.1, ENST00000672810.1, ENST00000672945.1, ENST00000673011.1, ENST00000673256.1, ENST00000673300.1, ENST00000673622.1
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCGCCGCCCGGCTCGCCGCGAGTGACAGCTCCCCTGCCTCTGACTaGCAGCAACTTCTAACGCCCGCTCCGCACCTGGCGCTCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AAARLAASDSSPASD*QQLLTPAPHLALAG Trigger: GCCAGCGAGCGCCAGGTGCGGAGCGGGCGTTAGAAGTTGCTGGCAGTCAGAGGCAGGGGAGCTGTCACTCGCGGCGAGCCGGGCGGCGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656635.2 ENST00000669200.1 |
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| CDS GCA 90 bp | GATGTCCTTCTGCTCAGGAGGCAGGAACCGAGGTTGCCGCAGGCCTaGACGCATCTGCCGCCACTCACGGGCCCCACTGCCAAACGTGGA | + |
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Preference number: 5 (lower is better) Translates to: DVLLLRRQEPRLPQA*THLPPLTGPTAKRG Trigger: TCCACGTTTGGCAGTGGGGCCCGTGAGTGGCGGCAGATGCGTGCAGGCCTGCGGCAACCTCGGTTCCTGCCTCCTGAGCAGAAGGACATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671914.1 |
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| CDS GCA 90 bp | TTCGCCCCTGCTCCAACGTGTTCCTCAGTCTCTCCCTCTGCCTTGTaGCCCTCGGTCGATGTCCTTCTGCTCAGGAGGCAGGAACCGAGG | + |
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Preference number: 5 (lower is better) Translates to: FAPAPTCSSVSPSAL*PSVDVLLLRRQEPR Trigger: CCTCGGTTCCTGCCTCCTGAGCAGAAGGACATCGACCGAGGGGCACAAGGCAGAGGGAGAGACTGAGGAACACGTTGGAGCAGGGGCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671914.1 |
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| CDS TCA 90 bp | CGAGTGCGAGGGCAGCTCTTTTGGCGAGCGCAACAAGGCTTTCCATaGGTCTTCCTCTCTCGCTTCCTCCTGCTTCAGTCTGTAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RVRGQLFWRAQQGFP*VFLSRFLLLQSVAC Trigger: ACAGGCTACAGACTGAAGCAGGAGGAAGCGAGAGAGGAAGACTCATGGAAAGCCTTGTTGCGCTCGCCAAAAGAGCTGCCCTCGCACTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS TCA 90 bp | GGTCAGCGAGGGCAGCTCTTTTGGCGAGCGCAACAAGGCTTTCCATaGGTCTTCCTCTCTCGCTTCCTCCTGCTTCAGTCTGTAGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: GQRGQLFWRAQQGFP*VFLSRFLLLQSVAC Trigger: ACAGGCTACAGACTGAAGCAGGAGGAAGCGAGAGAGGAAGACTCATGGAAAGCCTTGTTGCGCTCGCCAAAAGAGCTGCCCTCGCTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS GCA 90 bp | TTCTTGAACCCTATCTATGGAGGAAAACCGCTCACAGCCAGCCAGTaGCCCCACCCAAGGGAAGGATCAGTGGAGAGGCAACAATGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FLNPIYGGKPLTASQ*PHPREGSVERQQCH Trigger: GTGGCATTGTTGCCTCTCCACTGATCCTTCCCTTGGGTGGGGGCACTGGCTGGCTGTGAGCGGTTTTCCTCCATAGATAGGGTTCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS CCA 90 bp | TCCTCTCTTCTCCAGTGGGTGATCATGACGAGATGGCACCGGGTTTaGCAGGGAAACAGTAAGACCAAGACATCCCAGAGCCCGCTCATC | + |
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Preference number: 5 (lower is better) Translates to: SSLLQWVIMTRWHRV*QGNSKTKTSQSPLI Trigger: GATGAGCGGGCTCTGGGATGTCTTGGTCTTACTGTTTCCCTGCCAAACCCGGTGCCATCTCGTCATGATCACCCACTGGAGAAGAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520929.1 ENST00000632572.1 |
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| CDS CCA 90 bp | CAGGGACACAGTAAGAACGAGACATCCCGGAGCCCTAAGGACGAATaGCGGATACCCTACTCAGGATCCTGGGAAAGTTCACAGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: QGHSKNETSRSPKDE*RIPYSGSWESSQSL Trigger: CAGGCTCTGTGAACTTTCCCAGGATCCTGAGTAGGGTATCCGCCATTCGTCCTTAGGGCTCCGGGATGTCTCGTTCTTACTGTGTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000671914.1 ENST00000673256.1 |
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| CDS TCA 90 bp | GCTTTACCAGAGGCCGGTCGGGAGTATTTGCTTACGTGTCATCTCTaGCTGCTTTCACGCTGCTACGGCGTGAACGGAGACCATGATACC | + |
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Preference number: 5 (lower is better) Translates to: ALPEAGREYLLTCHL*LLSRCYGVNGDHDT Trigger: GGTATCATGGTCTCCGTTCACGCCGTAGCAGCGTGAAAGCAGTCAGAGATGACACGTAAGCAAATACTCCCGACCGGCCTCTGGTAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS CCA 90 bp | GGGTCTAGTACCTCCGACAGGCGCACTCCAACCTCTCTGAAGACTTaGCAGAGGTTGGAGAAGACAGGGAATCTCCAACCTCTGAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: GSSTSDRRTPTSLKT*QRLEKTGNLQPLRR Trigger: TCTTCTCAGAGGTTGGAGATTCCCTGTCTTCTCCAACCTCTGCCAAGTCTTCAGAGAGGTTGGAGTGCGCCTGTCGGAGGTACTAGACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000518556.5 ENST00000521653.6 ENST00000632183.1 ENST00000634122.1 ENST00000654770.1 ENST00000655011.1 ENST00000657454.1 ENST00000659585.1 ENST00000661539.1 ENST00000661856.1 ENST00000668087.1 |
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| CDS CCA 90 bp | AAAACAGGCTCCTCGTCTACTGTGAGAACCTCCTCTCTTCTGCAGTaGGTGATCATGACGAGATGGGACCAGGGTTGGCAGGGACACAGT | + |
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Preference number: 5 (lower is better) Translates to: KTGSSSTVRTSSLLQ*VIMTRWDQGWQGHS Trigger: ACTGTGTCCCTGCCAACCCTGGTCCCATCTCGTCATGATCACCCACTGCAGAAGAGAGGAGGTTCTCACAGTAGACGAGGAGCCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521653.6 |
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| CDS CCA 90 bp | CAGGGACACAGTAAGAACGAGACATCCCGGAGCCCTAAGGACGAATaGCGGATACCCTACTCAGGATCCTGGGAAAGTTCACAGAGCCTA | + |
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Preference number: 5 (lower is better) Translates to: QGHSKNETSRSPKDE*RIPYSGSWESSQSL Trigger: TAGGCTCTGTGAACTTTCCCAGGATCCTGAGTAGGGTATCCGCCATTCGTCCTTAGGGCTCCGGGATGTCTCGTTCTTACTGTGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000640576.3 ENST00000662595.2 ENST00000671715.1 ENST00000671848.1 ENST00000672668.1 ENST00000672730.1 ENST00000672794.1 ENST00000673300.1 |
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| CDS TCA 90 bp | TCCACTCTGAAGGGAGAAATTTCCAGCCCCCTTGTGGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAACCTCCTCTCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: STLKGEISSPLVAAS*KTGSSSTVRTSSLL Trigger: CAGAAGAGAGGAGGTTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCCACAAGGGGGCTGGAAATTTCTCCCTTCAGAGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521653.6 |
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| CDS CCA 90 bp | AAAACAGGCTCCTCGTCTACTGTGAGAATCTCCTCTCTTCTCCAGTaGGTGATCATGACGAGATGGCACCGGGTTTGGCAGGGAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: KTGSSSTVRISSLLQ*VIMTRWHRVWQGNS Trigger: ACTGTTTCCCTGCCAAACCCGGTGCCATCTCGTCATGATCACCCACTGGAGAAGAGAGGAGATTCTCACAGTAGACGAGGAGCCTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000520929.1 ENST00000632572.1 |
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| CDS GCA 90 bp | CCTGTATCCTCTGTTTCTCTACTCACAGCCATGCCCTTCTCCAGATaGTTCCAGGCCTTCCAGGTCCTATTTGAAGGGAGAAATGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PVSSVSLLTAMPFSR*FQAFQVLFEGRNVQ Trigger: CTGGACATTTCTCCCTTCAAATAGGACCTGGAAGGCCTGGAAGCATCTGGAGAAGGGCATGGCTGTGAGTAGAGAAACAGAGGATACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000520929.1 ENST00000632572.1 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS GCA 90 bp | TCCTCCTGCTTTAGCCTGTATCCTCTGTTTCTCTACTCACAGCCATaGCCTTCTCCAGATGCTTCCAGGCCTTCCAGGTCCTATTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSCFSLYPLFLYSQP*PSPDASRPSRSYLK Trigger: CTTCAAATAGGACCTGGAAGGCCTGGAAGCATCTGGAGAAGGGCATGGCTGTGAGTAGAGAAACAGAGGATACAGGCTAAAGCAGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000520929.1 ENST00000632572.1 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS CCA 90 bp | ACTTTTCTGTTGCTCCCCTTTACTCATTGCATCTTTCCCAGGTCCTaGATCCCGGGCCATCCTCCCATCAAATCACATCCCTTCTACCTC | + |
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Preference number: 5 (lower is better) Translates to: TFLLLPFTHCIFPRS*IPGHPPIKSHPFYL Trigger: GAGGTAGAAGGGATGTGATTTGATGGGAGGATGGCCCGGGATCCAGGACCTGGGAAAGATGCAATGAGTAAAGGGGAGCAACAGAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000672028.1 |
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| CDS TCA 90 bp | AGCCGCACCCTTCTCCAGATGCTTTCAGACCTTCTAGGTCCTATCTaGAGGGAGAAATTTCCAGCTCCCTTGCAGCAGCTAGCTGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SRTLLQMLSDLLGPI*REKFPAPLQQLAEK Trigger: TTTTTCAGCTAGCTGCTGCAAGGGAGCTGGAAATTTCTCCCTTCAGATAGGACCTAGAAGGTCTGAAAGCATCTGGAGAAGGGTGCGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS TCA 90 bp | GTCCTATTTGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTGGGAAGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VLFEGRNVQLLAAAS*KTGSSSTVRIWEVG Trigger: TCCCACTTCCCAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517611.1 ENST00000633554.1 |
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| CDS TCA 90 bp | ATTTGCTTACGTGTCATCTCTGACTGCTTTCACGCTGCTACGGCGTaGACGGAGACCATGATACCTATGAGTGTTTTCCACCTGGCCCTT | + |
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Preference number: 5 (lower is better) Translates to: ICLRVISDCFHAATA*TETMIPMSVFHLAL Trigger: AAGGGCCAGGTGGAAAACACTCATAGGTATCATGGTCTCCGTTCACGCCGTAGCAGCGTGAAAGCAGTCAGAGATGACACGTAAGCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS GCA 90 bp | AAGGCTTCTGGACTAACTCCACCCTCTGACTGCCGGATGGGCATCTaGAACAGGATCTTGGAGCCTTTCCTATTGCAATTTTCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: KASGLTPPSDCRMGI*NRILEPFLLQFSSF Trigger: AAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGTGGAGTTAGTCCAGAAGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS CCA 90 bp | CCATGTGTCCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTTaGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCTGTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: PCVPLTAGWASATGS*SLSYCNFPPFLSKT Trigger: TGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671848.1 |
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| CDS TCA 90 bp | GTCCTATTTGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTCCTCTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLFEGRNVQLLAAAS*KTGSSSTVRISSLL Trigger: GAGAAGAGAGGAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000519160.5 ENST00000520929.1 ENST00000632572.1 ENST00000633454.1 |
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| CDS TCA 90 bp | CCAAGGTTGTGCCACTACACTCCAAGTGGGCAACAAAGCCGACCCTaGTCCTCTTTCCTCTTCGTTGTCAAACTCATAAGTAACCAAGGT | + |
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Preference number: 5 (lower is better) Translates to: PRLCHYTPSGQQSRP*SSFLFVVKLISNQG Trigger: ACCTTGGTTACTTATGAGTTTGACAACGAAGAGGAAAGAGGATCAGGGTCGGCTTTGTTGCCCACTTGGAGTGTAGTGGCACAACCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000519160.5 ENST00000633454.1 ENST00000654770.1 ENST00000659585.1 ENST00000667730.1 ENST00000669200.1 |
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| CDS TCA 90 bp | GTCCTATTTGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCGCTCATCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: VLFEGRNVQLLAAAS*KTGSSSTVRIAHLL Trigger: CAGAAGATGAGCGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521132.1 ENST00000631378.1 ENST00000661539.1 |
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| CDS CCA 90 bp | ATAGGACAGCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTTaGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCTGTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: IGQPLTAGWASATGS*SLSYCNFPPFLSKT Trigger: TGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGCTGTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673622.1 |
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| CDS TCA 90 bp | TCCTATCTGAAGGGAGAAATTTCCAGCTCCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTAGTGTGAGAATCTGTTCTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: SYLKGEISSSLAAAS*KTGSSSSVRICSCR Trigger: CCTACAAGAACAGATTCTCACACTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGGAGCTGGAAATTTCTCCCTTCAGATAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS TCA 90 bp | GTCCTATTTGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTGTTCTTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: VLFEGRNVQLLAAAS*KTGSSSTVRICSCR Trigger: CCTACAAGAACAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000519241.6 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661856.1 |
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| CDS TCA 90 bp | AGAGTGAGTCACACAAATTTGTTGGTTTTCCAGTGCATAAACCTCTaGCTGCCGGATGGGCATCTGCAACAGGATCTTGGAGCCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RVSHTNLLVFQCINL*LPDGHLQQDLGAFP Trigger: AGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGTTTATGCACTGGAAAACCAACAAATTTGTGTGACTCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS GCA 90 bp | ACTCTTCTATACTCCATGTGTCCCTCTGACTGCCGGATGGGCATCTaGAACAGGATCTTGGAGCCTTTCCTATTGCAATTTTCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: TLLYSMCPSDCRMGI*NRILEPFLLQFSSF Trigger: AAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTATAGAAGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671848.1 |
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| CDS CCA 90 bp | GCTGAGAAGTTCAGAGACAAGCAATATGTGTCAGTTCCACATGGCTaGGGACACTTCACAATCATGACAGAAGGCGAAAGGCAAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: AEKFRDKQYVSVPHG*GHFTIMTEGERQVS Trigger: TGAGACTTGCCTTTCGCCTTCTGTCATGATTGTGAAGTGTCCCCAGCCATGTGGAACTGACACATATTGCTTGTCTCTGAACTTCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519160.5 ENST00000633454.1 |
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| CDS CCA 90 bp | GTGCATAAACCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTTaGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCTGTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: VHKPLTAGWASATGS*SLSYCNFPPFLSKT Trigger: TGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGTTTATGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CCA 90 bp | TTAATCCCTCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTTaGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCTGTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: LIPPLTAGWASATGS*SLSYCNFPPFLSKT Trigger: TGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGAGGGATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671715.1 |
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| CDS GCA 90 bp | TGGGTCACATGGCCTTCACCAGTGATGGGTTTAGCAATAGGCATGTaGTGTAATACAGACCATATGATGTTTCCGGAAGGTCACTATGAG | + |
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Preference number: 5 (lower is better) Translates to: WVTWPSPVMGLAIGM*CNTDHMMFPEGHYE Trigger: CTCATAGTGACCTTCCGGAAACATCATATGGTCTGTATTACAGCACATGCCTATTGCTAAACCCATCACTGGTGAAGGCCATGTGACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000640576.3 ENST00000662595.2 ENST00000671848.1 |
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| CDS GCA 90 bp | ACTGCCGGATGGGCATCTGCAACAGGATCTTGGAGCCTTTCCTATTaGAATTTTCCTCCTTTCCTGTCTAAGACAACCATGTCTCTTATC | + |
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Preference number: 5 (lower is better) Translates to: TAGWASATGSWSLSY*NFPPFLSKTTMSLI Trigger: GATAAGAGACATGGTTGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 12 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000662595.2 ENST00000671715.1 ENST00000671848.1 ENST00000671914.1 ENST00000672028.1 ENST00000672730.1 ENST00000672794.1 ENST00000672810.1 ENST00000672945.1 ENST00000673622.1 |
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| CDS CCA 90 bp | ATAAATCTGCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTTaGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCTGTCTAAGACA | + |
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Preference number: 5 (lower is better) Translates to: INLPLTAGWASATGS*SLSYCNFPPFLSKT Trigger: TGTCTTAGACAGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGCAGATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000672028.1 |
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| CDS CCA 90 bp | ATTCACAGACTCTTCTATACTCCATGTGTCCCTCTGACTGCCGGATaGGCATCTGCAACAGGATCTTGGAGCCTTTCCTATTGCAATTTT | + |
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Preference number: 5 (lower is better) Translates to: IHRLFYTPCVPLTAG*ASATGSWSLSYCNF Trigger: AAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTATAGAAGAGTCTGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671848.1 |
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| CDS TCA 90 bp | TGTGACCCAGATGTGACTCAAAGTAGGCGCTTAGGAAGTACTTTTTaGGTAAGTAGTGAGAAGGCCAGGCTTGACATTTTCATGACACCC | + |
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Preference number: 5 (lower is better) Translates to: CDPDVTQSRRLGSTF*VSSEKARLDIFMTP Trigger: GGGTGTCATGAAAATGTCAAGCCTGGCCTTCTCACTACTTACTCAAAAAGTACTTCCTAAGCGCCTACTTTGAGTCACATCTGGGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655011.1 |
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| CDS TCA 90 bp | CTGTCATGGCAAACAAGATCTCAAACTTGTCCCCTAACACTTCTCTaGTCTGCAGTTCGGTCATTCTCCCCTTGCTTACTGCAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LSWQTRSQTCPLTLL*SAVRSFSPCLLQSS Trigger: TGAAGATTGCAGTAAGCAAGGGGAGAATGACCGAACTGCAGATCAGAGAAGTGTTAGGGGACAAGTTTGAGATCTTGTTTGCCATGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS GCA 90 bp | TTTCAAACCTCATTTAATCCCTCCTCTGACTGCCGGATGGGCATCTaGAACAGGATCTTGGAGCCTTTCCTATTGCAATTTTCCTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: FQTSFNPSSDCRMGI*NRILEPFLLQFSSF Trigger: AAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGAGGGATTAAATGAGGTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671715.1 |
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| CDS GCA 90 bp | AACATGGGAGTATCCCAGGCCTCAGTCTTCAGCCCTTTTTCTATGTaGACTCATCCCTATGGGATCTCACAAAGCCTGATGGTATTAAAT | + |
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Preference number: 5 (lower is better) Translates to: NMGVSQASVFSPFSM*THPYGISQSLMVLN Trigger: ATTTAATACCATCAGGCTTTGTGAGATCCCATAGGGATGAGTGCACATAGAAAAAGGGCTGAAGACTGAGGCCTGGGATACTCCCATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000672730.1 ENST00000672945.1 |
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| CDS CCA 90 bp | AGGGAAATAATCCTGTTAGGCAAGATTTGGAAATGCTCTGGTAACTaGGTCACATGGCCTTCACCAGTGATGGGTTTAGCAATAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: REIILLGKIWKCSGN*VTWPSPVMGLAIGM Trigger: CATGCCTATTGCTAAACCCATCACTGGTGAAGGCCATGTGACCCAGTTACCAGAGCATTTCCAAATCTTGCCTAACAGGATTATTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000640576.3 ENST00000662595.2 ENST00000671848.1 |
||
| CDS TCA 90 bp | AGATTAATATACAATGAAAACAGCACACTTCCACAAGGAAATCCTTaGTCCTCCACTCTTAACCCCTGGACCCTCCACTCATCGGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RLIYNENSTLPQGNP*SSTLNPWTLHSSVF Trigger: GAAGACCGATGAGTGGAGGGTCCAGGGGTTAAGAGTGGAGGATCAAGGATTTCCTTGTGGAAGTGTGCTGTTTTCATTGTATATTAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656851.2 ENST00000672730.1 ENST00000672945.1 |
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| CDS TCA 90 bp | TCTGAGCCTCACTCTGAGTGTCTGTGGCCTAGTTTTCCAGGTCTGTaGGACAACGAATCTCAGATATTTACCACAGACAATAATGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SEPHSECLWPSFPGL*DNESQIFTTDNNAI Trigger: AATGGCATTATTGTCTGTGGTAAATATCTGAGATTCGTTGTCTCACAGACCTGGAAAACTAGGCCACAGACACTCAGAGTGAGGCTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS GCA 90 bp | TGGAAATGCTCTGGTAACTGGGTGATGGGTTTAGCAATAGGCATGTaGTGTAATACAGACCATATGATGTTTCCGGAAGGTCACTATGAG | + |
|
Preference number: 5 (lower is better) Translates to: WKCSGNWVMGLAIGM*CNTDHMMFPEGHYE Trigger: CTCATAGTGACCTTCCGGAAACATCATATGGTCTGTATTACAGCACATGCCTATTGCTAAACCCATCACCCAGTTACCAGAGCATTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671715.1 |
||
| CDS CCA 90 bp | CACAAATTTGTTGGTTTTCCAGTGCATAAACCTCTGACTGCCGGATaGGCATCTGCAACAGGATCTTGGAGCCTTTCCTATTGCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HKFVGFPVHKPLTAG*ASATGSWSLSYCNF Trigger: AAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGTTTATGCACTGGAAAACCAACAAATTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS TCA 90 bp | ATAATGCTTTACCAAGTTTCCAGACATTCCTTAACCCAGCCAAGTTaGCACCTAAAATTAAGTCCATGGGTCCACCCCTTGTTGACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IMLYQVSRHSLTQPS*HLKLSPWVHPLLTW Trigger: CCAAGTCAACAAGGGGTGGACCCATGGACTTAATTTTAGGTGTCAACTTGGCTGGGTTAAGGAATGTCTGGAAACTTGGTAAAGCATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661539.1 |
||
| CDS CCA 90 bp | ATCATGACAGAAGGCGAAAGGCAAGTCTCACATAACAGATCAAAATaGGCAAGGTTTAGCAGCTCCATCATCTTTCTCTCATTTCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: IMTEGERQVSHNRSK*ARFSSSIIFLSFPL Trigger: CAGTGGAAATGAGAGAAAGATGATGGAGCTGCTAAACCTTGCCCATTTTGATCTGTTATGTGAGACTTGCCTTTCGCCTTCTGTCATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519160.5 ENST00000633454.1 |
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| CDS TCA 90 bp | GATCTTTCCCACCTAGTCCACTCAGACCTACACATTAATCTTTTCTaGGAACACCCTCGAGGCATACCCAAAATAATGCTTTACCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DLSHLVHSDLHINLF*EHPRGIPKIMLYQV Trigger: AACTTGGTAAAGCATTATTTTGGGTATGCCTCGAGGGTGTTCTCAGAAAAGATTAATGTGTAGGTCTGAGTGGACTAGGTGGGAAAGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661539.1 |
||
| CDS GCA 90 bp | TTTTTAAAGCTCAGGGAAATAATCCTGTTAGGCAAGATTTGGAAATaGTCTGGTAACTGGGTCACATGGCCTTCACCAGTGATGGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FLKLREIILLGKIWK*SGNWVTWPSPVMGL Trigger: TAAACCCATCACTGGTGAAGGCCATGTGACCCAGTTACCAGAGCATTTCCAAATCTTGCCTAACAGGATTATTTCCCTGAGCTTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671848.1 |
||
| CDS GCA 90 bp | TTTTTAAAGCTCAGGGAAATAATCCTGTTAGGCAAGATTTGGAAATaGTCTGGTAACTGGGTGATGGGTTTAGCAATAGGCATGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLREIILLGKIWK*SGNWVMGLAIGMCC Trigger: ACAGCACATGCCTATTGCTAAACCCATCACCCAGTTACCAGAGCATTTCCAAATCTTGCCTAACAGGATTATTTCCCTGAGCTTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671715.1 |
||
| CDS CCA 90 bp | CTCGTTATTGTCACTCTGCTATGTCAATGTCCATGTCAGAAATTTTaGGCTTCATTGGCTTACTCGCTGCACAGTATTTTTGTATGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LVIVTLLCQCPCQKF*ASLAYSLHSIFVWM Trigger: CATCCATACAAAAATACTGTGCAGCGAGTAAGCCAATGAAGCCCAAAATTTCTGACATGGACATTGACATAGCAGAGTGACAATAACGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655105.1 |
||
| CDS TCA 90 bp | GATCTCCCATGTATTCTCTCATGTTCCCTGTACTTTATTCTTCACTaGGCAACCAGGGTAAGCCTTAAAAGCATAAGACAATTAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLPCILSCSLYFILH*ATRVSLKSIRQLMF Trigger: AAACATTAATTGTCTTATGCTTTTAAGGCTTACCCTGGTTGCTCAGTGAAGAATAAAGTACAGGGAACATGAGAGAATACATGGGAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS GCA 72 bp | CTGCTCAGGAGGCAGGAACCGAGGTTGCCGCAGGCCTaGACGCATCTGCCGCCACTCACGGGCCCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLRRQEPRLPQA*THLPPLTGPTA Trigger: GGCAGTGGGGCCCGTGAGTGGCGGCAGATGCGTGCAGGCCTGCGGCAACCTCGGTTCCTGCCTCCTGAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671914.1 |
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| CDS GCA 72 bp | CGGCTCGCCGCGAGTGACAGCTCCCCTGCCTCTGACTaGCAGCAACTTCTAACGCCCGCTCCGCACCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLAASDSSPASD*QQLLTPAPHLA Trigger: CGCCAGGTGCGGAGCGGGCGTTAGAAGTTGCTGGCAGTCAGAGGCAGGGGAGCTGTCACTCGCGGCGAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656635.2 ENST00000669200.1 |
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| CDS CCA 72 bp | AGGCTCAGACTAGAGACTGCTCTCAACTTTGCGCCCTaGCCGCCGCCCGGCTCGCCGCGAGTGACAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLRLETALNFAP*PPPGSPRVTAP Trigger: GGGAGCTGTCACTCGCGGCGAGCCGGGCGGCGGCCAGGGCGCAAAGTTGAGAGCAGTCTCTAGTCTGAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000519241.6 ENST00000519314.5 ENST00000640454.2 ENST00000640576.3 ENST00000655105.1 ENST00000656635.2 ENST00000669200.1 ENST00000671848.1 |
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| CDS CAA 90 bp | ACTTTCGCCCCTGCTCCAACGTGTTCCTCAGTCTCTCCCTCTGCCTaGTGCCCCTCGGTCGATGTCCTTCTGCTCAGGAGGCAGGAACCG | + |
|
Preference number: 6 (lower is better) Translates to: TFAPAPTCSSVSPSA*CPSVDVLLLRRQEP Trigger: CGGTTCCTGCCTCCTGAGCAGAAGGACATCGACCGAGGGGCACAAGGCAGAGGGAGAGACTGAGGAACACGTTGGAGCAGGGGCGAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671914.1 |
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| CDS TCA 72 bp | ACAAGAGCAGGGTTGAGCAGCTCCGTCCCCTCCCTCTaGGAACACTCTCCGGCTCTTCACCGTGCCTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRAGLSSSVPSL*EHSPALHRAYL Trigger: GAGGTAGGCACGGTGAAGAGCCGGAGAGTGTTCTCAGAGGGAGGGGACGGAGCTGCTCAACCCTGCTCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673300.1 |
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| CDS GCA 72 bp | GCTCCAACGTGTTCCTCAGTCTCTCCCTCTGCCTTGTaGCCCTCGGTCGATGTCCTTCTGCTCAGGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: APTCSSVSPSAL*PSVDVLLLRRQ Trigger: CTGCCTCCTGAGCAGAAGGACATCGACCGAGGGGCACAAGGCAGAGGGAGAGACTGAGGAACACGTTGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671914.1 |
||
| CDS CAA 72 bp | CCCAGGAGTTGGGCGTGTGGGATAATGCAGGACACCTaGACAGCCACAAGAGCAGGGTTGAGCAGCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSWACGIMQDT*TATRAGLSSSV Trigger: GACGGAGCTGCTCAACCCTGCTCTTGTGGCTGTCAAGGTGTCCTGCATTATCCCACACGCCCAACTCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673300.1 |
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| CDS CAA 90 bp | CGCAGGAAGGTGGACATCAGCAGCCTCCCTGTAAGATCCCAGGAGTaGGGCGTGTGGGATAATGCAGGACACCTTGACAGCCACAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRKVDISSLPVRSQE*GVWDNAGHLDSHKS Trigger: GCTCTTGTGGCTGTCAAGGTGTCCTGCATTATCCCACACGCCCAACTCCTGGGATCTTACAGGGAGGCTGCTGATGTCCACCTTCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673300.1 |
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| CDS TCA 72 bp | CAGACGTTCCTGTCACTCACGGTAGCTGGTCTGACGTaGGCATGGTACCAGGGGGTCTCCCTACCTCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: QTFLSLTVAGLT*AWYQGVSLPPS Trigger: TGATGGAGGTAGGGAGACCCCCTGGTACCATGCTCACGTCAGACCAGCTACCGTGAGTGACAGGAACGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS TCA 72 bp | GAGGCCGGTCGGGAGTATTTGCTTACGTGTCATCTCTaGCTGCTTTCACGCTGCTACGGCGTGAACGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: EAGREYLLTCHL*LLSRCYGVNGD Trigger: GTCTCCGTTCACGCCGTAGCAGCGTGAAAGCAGTCAGAGATGACACGTAAGCAAATACTCCCGACCGGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS GCA 72 bp | TCCCTCTCCGTCACACGTTTCAGGAACTTTCGCCCCTaGTCCAACGTGTTCCTCAGTCTCTCCCTCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSVTRFRNFRP*SNVFLSLSLCL Trigger: AAGGCAGAGGGAGAGACTGAGGAACACGTTGGAGCAGGGGCGAAAGTTCCTGAAACGTGTGACGGAGAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671914.1 |
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| CDS CCA 72 bp | GACCCTGTTCACTCTAGCACCTCCTCTCTTCTGCAGTaGGTGATCATGACGAGATGGGACCAGGGTTGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: DPVHSSTSSLLQ*VIMTRWDQGWQ Trigger: CTGCCAACCCTGGTCCCATCTCGTCATGATCACCCACTGCAGAAGAGAGGAGGTGCTAGAGTGAACAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000640576.3 ENST00000662595.2 ENST00000671715.1 ENST00000671848.1 ENST00000671914.1 ENST00000672730.1 ENST00000672794.1 ENST00000673256.1 ENST00000673300.1 |
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| CDS CCA 72 bp | CCTAAGGACGAATGGCGGATACCCTACTCAGGATCCTaGGAAAGTTCACAGAGCCTGTCACACCGTGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: PKDEWRIPYSGS*ESSQSLSHRDR Trigger: CCGGTCACGGTGTGACAGGCTCTGTGAACTTTCCCAGGATCCTGAGTAGGGTATCCGCCATTCGTCCTTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000671914.1 ENST00000673256.1 |
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| CDS CCA 72 bp | AGCAGCCTCCCTGTAAGATCCCAGGAGTTGGGCGTGTaGGATAATGCAGGACACCTTGACAGCCACAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLPVRSQELGV*DNAGHLDSHKS Trigger: GCTCTTGTGGCTGTCAAGGTGTCCTGCATTATCCCACACGCCCAACTCCTGGGATCTTACAGGGAGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673300.1 |
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| CDS CAA 72 bp | GTGGACATCAGCAGCCTCCCTGTAAGATCCCAGGAGTaGGGCGTGTGGGATAATGCAGGACACCTTGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VDISSLPVRSQE*GVWDNAGHLDS Trigger: GCTGTCAAGGTGTCCTGCATTATCCCACACGCCCAACTCCTGGGATCTTACAGGGAGGCTGCTGATGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673300.1 |
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| CDS CAA 72 bp | GAGACCCCAAGTCGAAGGTCAGCGAGGGCAGCTCTTTaGGCGAGCGCAACAAGGCTTTCCATGAGTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ETPSRRSARAAL*ASATRLSMSLP Trigger: AGGAAGACTCATGGAAAGCCTTGTTGCGCTCGCCAAAAGAGCTGCCCTCGCTGACCTTCGACTTGGGGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS CAA 90 bp | CGGGGATCCGATCACATAGCTCTTCACGTGAAAAGGGCAGCTCTTTaGGAGAGTGCAGCAAGGCTTTCCGTGAGTCCTCTCGCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RGSDHIALHVKRAAL*ESAARLSVSPLASS Trigger: GGAGGAAGCGAGAGGACTCACGGAAAGCCTTGCTGCACTCTCCAAAAGAGCTGCCCTTTTCACGTGAAGAGCTATGTGATCGGATCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS TCA 72 bp | GGGCAGCTCTTTTGGCGAGCGCAACAAGGCTTTCCATaGGTCTTCCTCTCTCGCTTCCTCCTGCTTCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQLFWRAQQGFP*VFLSRFLLLQS Trigger: AGACTGAAGCAGGAGGAAGCGAGAGAGGAAGACTCATGGAAAGCCTTGTTGCGCTCGCCAAAAGAGCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000518556.5 ENST00000632183.1 ENST00000673011.1 |
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| CDS CCA 72 bp | ACCTCCGACAGGCGCACTCCAACCTCTCTGAAGACTTaGCAGAGGTTGGAGAAGACAGGGAATCTCCAACCT | + |
|
Preference number: 6 (lower is better) Translates to: TSDRRTPTSLKT*QRLEKTGNLQP Trigger: AGGTTGGAGATTCCCTGTCTTCTCCAACCTCTGCCAAGTCTTCAGAGAGGTTGGAGTGCGCCTGTCGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000518556.5 ENST00000521653.6 ENST00000523341.5 ENST00000632183.1 ENST00000632290.1 ENST00000634122.1 ENST00000654770.1 ENST00000655011.1 ENST00000657454.1 ENST00000659585.1 ENST00000661539.1 ENST00000661856.1 ENST00000668087.1 |
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| CDS CCA 72 bp | ACCTCCTCTCTTCTGCAGTGGGTGATCATGACGAGATaGGACCAGGGTTGGCAGGGACACAGTAAGAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSSLLQWVIMTR*DQGWQGHSKNE Trigger: CTCGTTCTTACTGTGTCCCTGCCAACCCTGGTCCCATCTCGTCATGATCACCCACTGCAGAAGAGAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000521653.6 ENST00000640576.3 ENST00000662595.2 ENST00000671715.1 ENST00000671848.1 ENST00000671914.1 ENST00000672730.1 ENST00000672794.1 ENST00000673256.1 ENST00000673300.1 |
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| CDS CCA 72 bp | TTCCTCTCTCGCTTCCTCCCACTTCTGCCTGTAGCCTaGATTTCTCTACTCGTGGCCATGCCCTTCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: FLSRFLPLLPVA*ISLLVAMPFSR Trigger: TCTGGAGAAGGGCATGGCCACGAGTAGAGAAATCCAGGCTACAGGCAGAAGTGGGAGGAAGCGAGAGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521653.6 |
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| CDS CCA 72 bp | CTCCAGTGGGTGATCATGACGAGATGGCACCGGGTTTaGCAGGGAAACAGTAAGACCAAGACATCCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQWVIMTRWHRV*QGNSKTKTSQS Trigger: GCTCTGGGATGTCTTGGTCTTACTGTTTCCCTGCCAAACCCGGTGCCATCTCGTCATGATCACCCACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000520929.1 ENST00000632572.1 |
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| CDS GCA 72 bp | TTTCTTCAGGTAGGCATTAAACATGGCCCTCTCGAGTaGGAGGGCAGCTCTTTTGGCGAGCGCAACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FLQVGIKHGPLE*EGSSFGERNKA Trigger: AGCCTTGTTGCGCTCGCCAAAAGAGCTGCCCTCGCACTCGAGAGGGCCATGTTTAATGCCTACCTGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS GCA 72 bp | AGCTCTTCACGTGAAAAGGGCAGCTCTTTTGGAGAGTaGAGCAAGGCTTTCCGTGAGTCCTCTCGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSREKGSSFGE*SKAFRESSRFL Trigger: GAGGAAGCGAGAGGACTCACGGAAAGCCTTGCTGCACTCTCCAAAAGAGCTGCCCTTTTCACGTGAAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS GCA 72 bp | CAACGGACGCTTTACCAGAGGCCGGTCGGGAGTATTTaGTTACGTGTCATCTCTGACTGCTTTCACGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: QRTLYQRPVGSI*LRVISDCFHAA Trigger: AGCAGCGTGAAAGCAGTCAGAGATGACACGTAAGCAAATACTCCCGACCGGCCTCTGGTAAAGCGTCCGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS CAA 72 bp | TTAAACATGGCCCTCTCGAGTGCGAGGGCAGCTCTTTaGGCGAGCGCAACAAGGCTTTCCATGAGTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LNMALSSARAAL*ASATRLSMSLP Trigger: AGGAAGACTCATGGAAAGCCTTGTTGCGCTCGCCAAAAGAGCTGCCCTCGCACTCGAGAGGGCCATGTTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS TCA 72 bp | AAGGGAGAAATTTCCAGCCCCCTTGTGGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KGEISSPLVAAS*KTGSSSTVRTS Trigger: GGAGGTTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCCACAAGGGGGCTGGAAATTTCTCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521653.6 |
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| CDS GCA 72 bp | GCAGCAAGGCTTTCCGTGAGTCCTCTCGCTTCCTCCTaGTTTAGCCTGTATCCTCTGTTTCTCTACTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: AARLSVSPLASS*FSLYPLFLYSQ Trigger: CTGTGAGTAGAGAAACAGAGGATACAGGCTAAAGCAGGAGGAAGCGAGAGGACTCACGGAAAGCCTTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS GCA 72 bp | TCACAGACTCTTCTATACTCCATGTGTCCCTCTGACTaGCGGATGGGCATCTGCAACAGGATCTTGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SQTLLYSMCPSD*RMGICNRILEP Trigger: AGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTATAGAAGAGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671848.1 |
||
| CDS GCA 72 bp | CTCCTGCTTCAGTCTGTAGCCTGTTTCTCTACTCCCTaGTCTCAGCCACAGTCACTCTCATGTCACAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LLLQSVACFSTP*SQPQSLSCHRH Trigger: GTGTCTGTGACATGAGAGTGACTGTGGCTGAGAGCAGGGAGTAGAGAAACAGGCTACAGACTGAAGCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673011.1 |
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| CDS CAA 72 bp | CCTTCTCCAGATGCTTCCAGGCCTTCCAGGTCCTATTaGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PSPDASRPSRSY*KGEMSSSLQQL Trigger: TAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGACCTGGAAGGCCTGGAAGCATCTGGAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000520929.1 ENST00000521132.1 ENST00000631378.1 ENST00000632572.1 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS CAA 90 bp | CAGCCATGCCCTTCTCCAGATGCTTCCAGGCCTTCCAGGTCCTATTaGAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: QPCPSPDASRPSRSY*KGEMSSSLQQLAEK Trigger: TTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTCAAATAGGACCTGGAAGGCCTGGAAGCATCTGGAGAAGGGCATGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 12 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000520929.1 ENST00000632572.1 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS TCA 72 bp | GAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVQLLAAAS*KTGSSSTVRIW Trigger: CCAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000517611.1 ENST00000633554.1 |
||
| CDS TCA 72 bp | GAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVQLLAAAS*KTGSSSTVRIS Trigger: GGAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000519160.5 ENST00000520929.1 ENST00000632572.1 ENST00000633454.1 |
||
| CDS TCA 72 bp | GAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVQLLAAAS*KTGSSSTVRIA Trigger: AGCGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000521132.1 ENST00000631378.1 ENST00000661539.1 |
||
| CDS TCA 72 bp | CGTGTCATCTCTGACTGCTTTCACGCTGCTACGGCGTaGACGGAGACCATGATACCTATGAGTGTTTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RVISDCFHAATA*TETMIPMSVFH Trigger: GTGGAAAACACTCATAGGTATCATGGTCTCCGTTCACGCCGTAGCAGCGTGAAAGCAGTCAGAGATGACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673011.1 |
||
| CDS GCA 72 bp | ACACCTCCCCACTTCAAGCTCATCTATAAAGCCCCTTaGACTTCACTGCCGAACCAGCAACCCATTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TPPHFKLIYKAP*TSLPNQQPISL Trigger: CAGAGAAATGGGTTGCTGGTTCGGCAGTGAAGTGCAAGGGGCTTTATAGATGAGCTTGAAGTGGGGAGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS CCA 72 bp | CTCTTCTATACTCCATGTGTCCCTCTGACTGCCGGATaGGCATCTGCAACAGGATCTTGGAGCCTTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LFYTPCVPLTAG*ASATGSWSLSY Trigger: ATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTATAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671848.1 |
||
| CDS CAA 72 bp | GATCACATAGCTCTTCACGTGAAAAGGGCAGCTCTTTaGGAGAGTGCAGCAAGGCTTTCCGTGAGTCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DHIALHVKRAAL*ESAARLSVSPL Trigger: GAGAGGACTCACGGAAAGCCTTGCTGCACTCTCCAAAAGAGCTGCCCTTTTCACGTGAAGAGCTATGTGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000517611.1 ENST00000519160.5 ENST00000519241.6 ENST00000633454.1 ENST00000633554.1 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 ENST00000661856.1 |
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| CDS CAA 72 bp | CCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTaGGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSDCRMGICNRI*EPFLLQFSSFP Trigger: AGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000671848.1 ENST00000672794.1 ENST00000672810.1 |
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| CDS CAA 72 bp | GCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTaGGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASDCRMGICNRI*EPFLLQFSSFP Trigger: AGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672028.1 ENST00000673622.1 |
||
| CDS TCA 72 bp | CAGCAGCTAGCTGAAAAACAGGCTCCTCGTCTACTGTaGGAATCTGGGAAGTGGGAATCAGACAGCAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QQLAEKQAPRLL*ESGKWESDSRD Trigger: ATCTCTGCTGTCTGATTCCCACTTCCCAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000517611.1 ENST00000633554.1 |
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| CDS TCA 72 bp | GAAGGGAGAAATGTCCAGCTCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTACTGTGAGAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EGRNVQLLAAAS*KTGSSSTVRIC Trigger: ACAGATTCTCACAGTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGAGCTGGACATTTCTCCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000519241.6 ENST00000654770.1 ENST00000655105.1 ENST00000657454.1 ENST00000661856.1 |
||
| CDS GCA 72 bp | ACTTCAAGCTCATCTATAAAGCCCCTTGCACTTCACTaGCGAACCAGCAACCCATTTCTCTGGGACCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSSSIKPLALH*RTSNPFLWDPS Trigger: AGAAGGGTCCCAGAGAAATGGGTTGCTGGTTCGGCAGTGAAGTGCAAGGGGCTTTATAGATGAGCTTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS GCA 72 bp | GTATCCCAGGCCTCAGTCTTCAGCCCTTTTTCTATGTaGACTCATCCCTATGGGATCTCACAAAGCCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: VSQASVFSPFSM*THPYGISQSLM Trigger: CATCAGGCTTTGTGAGATCCCATAGGGATGAGTGCACATAGAAAAAGGGCTGAAGACTGAGGCCTGGGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000672730.1 ENST00000672945.1 |
||
| CDS GCA 72 bp | TACTCCATGTGTCCCTCTGACTGCCGGATGGGCATCTaGAACAGGATCTTGGAGCCTTTCCTATTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: YSMCPSDCRMGI*NRILEPFLLQF Trigger: AAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671848.1 |
||
| CDS CCA 72 bp | TCAGGAATGTCAGACCACCATGAGGTGACTGTCACGTaGTTCTTGAACCCTATCTATGGAGGAAAACCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGMSDHHEVTVT*FLNPIYGGKPL Trigger: GAGCGGTTTTCCTCCATAGATAGGGTTCAAGAACCACGTGACAGTCACCTCATGGTGGTCTGACATTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673011.1 |
||
| CDS CAA 72 bp | ACCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTaGGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSDCRMGICNRI*EPFLLQFSSFP Trigger: AGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CAA 72 bp | TCCTCTGACTGCCGGATGGGCATCTGCAACAGGATCTaGGAGCCTTTCCTATTGCAATTTTCCTCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSDCRMGICNRI*EPFLLQFSSFP Trigger: AGGAAAGGAGGAAAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671715.1 |
||
| CDS TCA 72 bp | AAGGGAGAAATTTCCAGCTCCCTTGCAGCAGCTAGCTaGAAAACAGGCTCCTCGTCTAGTGTGAGAATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KGEISSSLAAAS*KTGSSSSVRIC Trigger: ACAGATTCTCACACTAGACGAGGAGCCTGTTTTTCAGCTAGCTGCTGCAAGGGAGCTGGAAATTTCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
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| CDS TCA 72 bp | CTTCTCCAGATGCTTTCAGACCTTCTAGGTCCTATCTaGAGGGAGAAATTTCCAGCTCCCTTGCAGCAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: LLQMLSDLLGPI*REKFPAPLQQL Trigger: TAGCTGCTGCAAGGGAGCTGGAAATTTCTCCCTTCAGATAGGACCTAGAAGGTCTGAAAGCATCTGGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518556.5 ENST00000632183.1 |
||
| CDS TCA 72 bp | TGCCACTACACTCCAAGTGGGCAACAAAGCCGACCCTaGTCCTCTTTCCTCTTCGTTGTCAAACTCATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: CHYTPSGQQSRP*SSFLFVVKLIS Trigger: ACTTATGAGTTTGACAACGAAGAGGAAAGAGGATCAGGGTCGGCTTTGTTGCCCACTTGGAGTGTAGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000519160.5 ENST00000633454.1 ENST00000654770.1 ENST00000659585.1 ENST00000667730.1 ENST00000669200.1 |
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| CDS TCA 72 bp | ATATTCACAGACTCTTCTATACTCCATGTGTCCCTCTaGCTGCCGGATGGGCATCTGCAACAGGATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: IFTDSSILHVSL*LPDGHLQQDLG Trigger: TCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGGACACATGGAGTATAGAAGAGTCTGTGAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671848.1 |
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| CDS TCA 72 bp | TTACAGGAAGAGCTAGCCAATCCCTGCATCGTGCCATaGCCAGAATGCCCTAATACTGACTGCTCATACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LQEELANPCIVP*PECPNTDCSYS Trigger: TGAGTATGAGCAGTCAGTATTAGGGCATTCTGGTCATGGCACGATGCAGGGATTGGCTAGCTCTTCCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673011.1 |
||
| CDS GCA 72 bp | TTACATAGGACAGCCTCTGACTGCCGGATGGGCATCTaGAACAGGATCTTGGAGCCTTTCCTATTGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LHRTASDCRMGI*NRILEPFLLQF Trigger: AAATTGCAATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGCTGTCCTATGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000673622.1 |
||
| CDS CCA 72 bp | TTCAAACCTCATTTAATCCCTCCTCTGACTGCCGGATaGGCATCTGCAACAGGATCTTGGAGCCTTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: FKPHLIPPLTAG*ASATGSWSLSY Trigger: ATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGAGGGATTAAATGAGGTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671715.1 |
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| CDS CAA 72 bp | CAGGGCCCTCAAAGTGCTGGGAATGTTGACTCTCTTTaGAACCAGTTTTCTTTCACAGACAGCCTAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QGPQSAGNVDSL*NQFSFTDSLGV Trigger: GACACCTAGGCTGTCTGTGAAAGAAAACTGGTTCAAAAGAGAGTCAACATTCCCAGCACTTTGAGGGCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS TCA 72 bp | CACACAAATTTGTTGGTTTTCCAGTGCATAAACCTCTaGCTGCCGGATGGGCATCTGCAACAGGATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HTNLLVFQCINL*LPDGHLQQDLG Trigger: TCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGTTTATGCACTGGAAAACCAACAAATTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CCA 72 bp | TTCAGAGACAAGCAATATGTGTCAGTTCCACATGGCTaGGGACACTTCACAATCATGACAGAAGGCGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRDKQYVSVPHG*GHFTIMTEGER Trigger: CCTTTCGCCTTCTGTCATGATTGTGAAGTGTCCCCAGCCATGTGGAACTGACACATATTGCTTGTCTCTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000519160.5 ENST00000633454.1 |
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| CDS CCA 72 bp | GAAGTTCAGAGACAAGCAATATGTGTCAGTTCCACATaGCTGGGGACACTTCACAATCATGACAGAAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: EVQRQAICVSST*LGTLHNHDRRR Trigger: TCGCCTTCTGTCATGATTGTGAAGTGTCCCCAGCCATGTGGAACTGACACATATTGCTTGTCTCTGAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000519160.5 ENST00000633454.1 |
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| CDS CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTATGTGTCGGGTGGGTTaGGAGGAGGCCTTTACTGTTAGAAGAAAGCTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: CVCVCVCMCRVG*EEAFTVRRKLF Trigger: AAAAAGCTTTCTTCTAACAGTAAAGGCCTCCTCCCAACCCACCCGACACATACACACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000519160.5 ENST00000633454.1 ENST00000654770.1 ENST00000659585.1 ENST00000667730.1 ENST00000669200.1 |
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| CDS CCA 72 bp | TCGTTACATTTAATCCTGTCTCCTACCTCTAGCCCCTaGGCAGCCACTGACTTACTTGCTGTCACTAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLHLILSPTSSP*AATDLLAVTSF Trigger: AAAACTAGTGACAGCAAGTAAGTCAGTGGCTGCCCAGGGGCTAGAGGTAGGAGACAGGATTAAATGTAACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000673622.1 |
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| CDS CAA 72 bp | TCCCAGATACTCAAAAGACTGAGGTGGGAGGATCACTaGAGCCCAGGTGAGCTAATATGTACTTCAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQILKRLRWEDH*SPGELICTSGE Trigger: TTCTCCTGAAGTACATATTAGCTCACCTGGGCTCAAGTGATCCTCCCACCTCAGTCTTTTGAGTATCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000519160.5 ENST00000633454.1 ENST00000654770.1 ENST00000659585.1 ENST00000667730.1 ENST00000669200.1 |
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| CDS TCA 72 bp | CAAACAAGATCTCAAACTTGTCCCCTAACACTTCTCTaGTCTGCAGTTCGGTCATTCTCCCCTTGCTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: QTRSQTCPLTLL*SAVRSFSPCLL Trigger: CAGTAAGCAAGGGGAGAATGACCGAACTGCAGATCAGAGAAGTGTTAGGGGACAAGTTTGAGATCTTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CAA 90 bp | CAAAGTAAAAGCCAATATCCTGTCATGGCAAACAAGATCTCAAACTaGTCCCCTAACACTTCTCTGATCTGCAGTTCGGTCATTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QSKSQYPVMANKISN*SPNTSLICSSVILP Trigger: GGGGAGAATGACCGAACTGCAGATCAGAGAAGTGTTAGGGGACAAGTTTGAGATCTTGTTTGCCATGACAGGATATTGGCTTTTACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS TCA 72 bp | TGTATTCTCTCATGTTCCCTGTACTTTATTCTTCACTaGGCAACCAGGGTAAGCCTGGAGGGATGTTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: CILSCSLYFILH*ATRVSLEGCYA Trigger: AGCATAACATCCCTCCAGGCTTACCCTGGTTGCTCAGTGAAGAATAAAGTACAGGGAACATGAGAGAATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000519241.6 ENST00000655105.1 ENST00000657454.1 ENST00000661539.1 |
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| CDS TCA 72 bp | CACTCTGAGTGTCTGTGGCCTAGTTTTCCAGGTCTGTaGGACAACGAATCTCAGATATTTACCACAGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: HSECLWPSFPGL*DNESQIFTTDN Trigger: ATTGTCTGTGGTAAATATCTGAGATTCGTTGTCTCACAGACCTGGAAAACTAGGCCACAGACACTCAGAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000672794.1 ENST00000672810.1 |
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| CDS GCA 72 bp | TCTGGTAACTGGGTGATGGGTTTAGCAATAGGCATGTaGTGTAATACAGACCATATGATGTTTCCGGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGNWVMGLAIGM*CNTDHMMFPEG Trigger: ACCTTCCGGAAACATCATATGGTCTGTATTACAGCACATGCCTATTGCTAAACCCATCACCCAGTTACCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671715.1 |
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| CDS CCA 72 bp | AATTCTAAAACTATAAATCTGCCTCTGACTGCCGGATaGGCATCTGCAACAGGATCTTGGAGCCTTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: NSKTINLPLTAG*ASATGSWSLSY Trigger: ATAGGAAAGGCTCCAAGATCCTGTTGCAGATGCCCATCCGGCAGTCAGAGGCAGATTTATAGTTTTAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000672028.1 |
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| CDS CAA 72 bp | TTACCAAGTTTCCAGACATTCCTTAACCCAGCCAAGTaGACACCTAAAATTAAGTCCATGGGTCCACCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LPSFQTFLNPAK*TPKIKSMGPPL Trigger: AAGGGGTGGACCCATGGACTTAATTTTAGGTGTCAACTTGGCTGGGTTAAGGAATGTCTGGAAACTTGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000661539.1 |
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| CDS TCA 72 bp | GATGTGACTCAAAGTAGGCGCTTAGGAAGTACTTTTTaGGTAAGTAGTGAGAAGGCCAGGCTTGACATTTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVTQSRRLGSTF*VSSEKARLDIF Trigger: GAAAATGTCAAGCCTGGCCTTCTCACTACTTACTCAAAAAGTACTTCCTAAGCGCCTACTTTGAGTCACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655011.1 |
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| CDS GCA 72 bp | CATTTATTTGTGGAGCATTTGGCCATACCCATCACGTaGACCTTGCATTACTTTACGTTGTCATTGTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: HLFVEHLAIPIT*TLHYFTLSLSW Trigger: CCATGACAATGACAACGTAAAGTAATGCAAGGTGCACGTGATGGGTATGGCCAAATGCTCCACAAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000519241.6 ENST00000655105.1 ENST00000661539.1 |
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| CDS CCA 72 bp | TTAAAGCTCAGGGAAATAATCCTGTTAGGCAAGATTTaGAAATGCTCTGGTAACTGGGTCACATGGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LKLREIILLGKI*KCSGNWVTWPS Trigger: TGAAGGCCATGTGACCCAGTTACCAGAGCATTTCCAAATCTTGCCTAACAGGATTATTTCCCTGAGCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662595.2 ENST00000671848.1 |
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| CDS CAA 72 bp | CCTTCAGTCAAATTCTTTCTTCTTAGAAGACAAGAATaGAGGTTGCTGCAGACCCATACAGATCTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PSVKFFLLRRQE*RLLQTHTDLLP Trigger: TGGCAGCAGATCTGTATGGGTCTGCAGCAACCTCAATTCTTGTCTTCTAAGAAGAAAGAATTTGACTGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000672794.1 |
||
| CDS TCA 72 bp | AAACAGCTCCTCAAAATGTTAGGCACAGTTATCCTATaGCCCAGCAATTCCACTACCAGGTATACACACAAA | + |
|
Preference number: 6 (lower is better) Translates to: KQLLKMLGTVIL*PSNSTTRYTHK Trigger: TTTGTGTGTATACCTGGTAGTGGAATTGCTGGGTCATAGGATAACTGTGCCTAACATTTTGAGGAGCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656635.2 ENST00000669200.1 |
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| CDS CCA 72 bp | GTCACTCTGCTATGTCAATGTCCATGTCAGAAATTTTaGGCTTCATTGGCTTACTCGCTGCACAGTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VTLLCQCPCQKF*ASLAYSLHSIF Trigger: AAAAATACTGTGCAGCGAGTAAGCCAATGAAGCCCAAAATTTCTGACATGGACATTGACATAGCAGAGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655105.1 |
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| CDS CAA 72 bp | AGTACATGTGAAGTTTTGGTAAGTTACTCAATCTCTTaGAGCCTCAGTTTTCTGAGTACAGTGGCCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: STCEVLVSYSIS*SLSFLSTVATP Trigger: AGGTGTGGCCACTGTACTCAGAAAACTGAGGCTCAAAGAGATTGAGTAACTTACCAAAACTTCACATGTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000661856.1 ENST00000662595.2 ENST00000668087.1 |
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| CDS TCA 72 bp | ACGTTGTCATTGTCATGGATTACTGAAGTAGCATCTTaGTTGATCTCCCATGTATTCTCTCATGTTCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TLSLSWITEVAS*LISHVFSHVPC Trigger: ACAGGGAACATGAGAGAATACATGGGAGATCAATCAAGATGCTACTTCAGTAATCCATGACAATGACAACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000519241.6 ENST00000655105.1 ENST00000656635.2 ENST00000656851.2 ENST00000657454.1 ENST00000661539.1 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CCA 72 bp | TATGTCAATGTCCATGTCAGAAATTTTGGGCTTCATTaGCTTACTCGCTGCACAGTATTTTTGTATGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: YVNVHVRNFGLH*LTRCTVFLYGC Trigger: GCATCCATACAAAAATACTGTGCAGCGAGTAAGCCAATGAAGCCCAAAATTTCTGACATGGACATTGACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655105.1 |
||
| CDS CAA 72 bp | CTATGTCAATGTCCATGTCAGAAATTTTGGGCTTCATaGGCTTACTCGCTGCACAGTATTTTTGTATGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LCQCPCQKFWAS*AYSLHSIFVWM Trigger: CATCCATACAAAAATACTGTGCAGCGAGTAAGCCAATGAAGCCCAAAATTTCTGACATGGACATTGACATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000655105.1 |
||
| CDS TCA 72 bp | CAGCAATTCCACTACCAGGTATACACACAAAAGAACTaGAAACTTAAGCTTCTACACAAATGTTCACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QQFHYQVYTQKN*KLKLLHKCSQW Trigger: CCACTGTGAACATTTGTGTAGAAGCTTAAGTTTTCAGTTCTTTTGTGTGTATACCTGGTAGTGGAATTGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656635.2 ENST00000669200.1 |
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| CDS CAA 72 bp | GATATTCCTCGTTACATTGGGCAGCCACTGACTTACTaGCTGTCACTAGTTTTGTCATTTGTAGAAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: DIPRYIGQPLTY*LSLVLSFVEIS Trigger: TGAAATTTCTACAAATGACAAAACTAGTGACAGCAAGTAAGTCAGTGGCTGCCCAATGTAACGAGGAATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000662595.2 ENST00000671715.1 ENST00000672028.1 ENST00000672510.1 ENST00000672730.1 ENST00000672794.1 ENST00000672810.1 ENST00000672945.1 ENST00000673011.1 |
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| CDS TCA 72 bp | CTTGCATTACTTTACGTTGTCATTGTCATGGATTACTaGAGTAGCATCTTGATTGATCTCCCATGTATTCTC | + |
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Preference number: 6 (lower is better) Translates to: LALLYVVIVMDY*SSILIDLPCIL Trigger: GAGAATACATGGGAGATCAATCAAGATGCTACTTCAGTAATCCATGACAATGACAACGTAAAGTAATGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000519241.6 ENST00000655105.1 ENST00000656635.2 ENST00000656851.2 ENST00000657454.1 ENST00000661539.1 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS CCA 72 bp | ATACCATGGTGCAACTGTCCTGTGATAGTGATCTTCTaGATGTTAGATAAGGATTTTAGACTTAGGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: IPWCNCPVIVIF*MLDKDFRLRDF Trigger: AAAATCCCTAAGTCTAAAATCCTTATCTAACATCCAGAAGATCACTATCACAGGACAGTTGCACCATGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661539.1 |
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| CDS CAA 72 bp | CTGAGAATTTATCAACTTATTCCCATGACGCAACAATaGCTTAGACAGCATTTGGGAATGCTTCTATTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LRIYQLIPMTQQ*LRQHLGMLLFR Trigger: TCTGAATAGAAGCATTCCCAAATGCTGTCTAAGCAATTGTTGCGTCATGGGAATAAGTTGATAAATTCTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661856.1 |
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| CDS CAA 72 bp | TTTACCTTCATTTTCACTTTTTCTATATTCCAGACATaGACAGATCTTTCCCACCTAGTCCACTCAGACCTA | + |
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Preference number: 6 (lower is better) Translates to: FTFIFTFSIFQT*TDLSHLVHSDL Trigger: TAGGTCTGAGTGGACTAGGTGGGAAAGATCTGTCAATGTCTGGAATATAGAAAAAGTGAAAATGAAGGTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661539.1 |
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| CDS TCA 72 bp | CTGCTAATTATTGCCACTAGGAAGATTAATATACAATaGAAACAGCACACTTCCACAAGGAAATCCTTGATC | + |
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Preference number: 6 (lower is better) Translates to: LLIIATRKINIQ*KQHTSTRKSLI Trigger: GATCAAGGATTTCCTTGTGGAAGTGTGCTGTTTTCATTGTATATTAATCTTCCTAGTGGCAATAATTAGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656851.2 ENST00000672730.1 ENST00000672945.1 |
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| CDS CAA 72 bp | CTTTTTGTTTCTTACACCTCATATCAGCATACACTGTaGAGCTCTATTCAGAATCTAATCTCCTTACCATAC | + |
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Preference number: 6 (lower is better) Translates to: LFVSYTSYQHTL*SSIQNLISLPY Trigger: GTATGGTAAGGAGATTAGATTCTGAATAGAGCTCAACAGTGTATGCTGATATGAGGTGTAAGAAACAAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000656635.2 ENST00000656851.2 ENST00000671914.1 ENST00000672730.1 ENST00000672945.1 |
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| CDS TCA 72 bp | GAAAGACACAATCCTGAATGCCATTATCCCAAATGTTaGACTCCAAAAAGATATACATCTCTACAGTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: ERHNPECHYPKC*TPKRYTSLQSK Trigger: TTTAGACTGTAGAGATGTATATCTTTTTGGAGTTCAACATTTGGGATAATGGCATTCAGGATTGTGTCTTTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000672028.1 |
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