Pregenerated sensors for LINC01559 (Homo sapiens)
Ensembl gene IDs: ENSG00000180861Ensembl transcript IDs: ENST00000318426.6, ENST00000527705.2, ENST00000531049.1, ENST00000532841.5, ENST00000539026.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGTCCAAAGCAGACCTTGTCTCTTTGAAGTGTGGGCCTGGAACCTaGCCTGTTTCCCACTCACCTCCACAGCCTCTGAGTCCCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QSKADLVSLKCGPGT*PVSHSPPQPLSPSK Trigger: CTTGGAGGGACTCAGAGGCTGTGGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGCTTTGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS GCA 90 bp | CAGTTGGCACGTCTTTTTCAGAAAGCTTGCCCGTGGCTGACAGCCTaGTTGGCACAGTTCCTCCGGAGTCCTTTGGTGATGGAGAACAGG | + |
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Preference number: 5 (lower is better) Translates to: QLARLFQKACPWLTA*LAQFLRSPLVMENR Trigger: CCTGTTCTCCATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS GCA 90 bp | ATGGACTTTCTGTGGCTGCAGTTGGCACGTCTTTTTCAGAAAGCTTaGCCGTGGCTGACAGCCTGCTTGGCACAGTTCCTCCGGAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: MDFLWLQLARLFQKA*PWLTACLAQFLRSP Trigger: AGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAGAAAGTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CCA 90 bp | CAGGGATGGCCTGGTGCAGGCAGAGCCTTGTGTCTGCTCTGTAATTaGGAGCTTGAGTCCAGTTCATGCTCTGACAGTCCCCATACCCTT | + |
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Preference number: 5 (lower is better) Translates to: QGWPGAGRALCLLCN*ELESSSCSDSPHTL Trigger: AAGGGTATGGGGACTGTCAGAGCATGAACTGGACTCAAGCTCCCAATTACAGAGCAGACACAAGGCTCTGCCTGCACCAGGCCATCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CCA 90 bp | TTTCTGTGGCTGCAGTTGGCACGTCTTTTTCAGAAAGCTTGCCCGTaGCTGACAGCCTGCTTGGCACAGTTCCTCCGGAGTCCTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: FLWLQLARLFQKACP*LTACLAQFLRSPLV Trigger: CACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CCA 90 bp | TGTAAAACAGTCCAAAGCAGACCTTGTCTCTTTGAAGTGTGGGCCTaGAACCTGGCCTGTTTCCCACTCACCTCCACAGCCTCTGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CKTVQSRPCLFEVWA*NLACFPLTSTASES Trigger: GGACTCAGAGGCTGTGGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGCTTTGGACTGTTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CCA 90 bp | CCTGTGTGTAAAACAGTCCAAAGCAGACCTTGTCTCTTTGAAGTGTaGGCCTGGAACCTGGCCTGTTTCCCACTCACCTCCACAGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVCKTVQSRPCLFEV*AWNLACFPLTSTAS Trigger: AGAGGCTGTGGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGCTTTGGACTGTTTTACACACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS GCA 90 bp | CATCAAACAGGACACAAAGCTGGAATGAGAGTAGCTGCATCTAGATaGTGGAAGAGAGTCCTGGAGCTGCAGAAATCCAGGGATGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: HQTGHKAGMRVAASR*WKRVLELQKSRDGL Trigger: CAGGCCATCCCTGGATTTCTGCAGCTCCAGGACTCTCTTCCAGCATCTAGATGCAGCTACTCTCATTCCAGCTTTGTGTCCTGTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 90 bp | AGGAAAGGCATCGAGGACTTTGCCCATGCCAGGGAGCTTGCAGTGTaGGATAAAACTGTGTTTGAATCTGAGGCGGGAGCATCATTTTCC | + |
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Preference number: 5 (lower is better) Translates to: RKGIEDFAHARELAV*DKTVFESEAGASFS Trigger: GGAAAATGATGCTCCCGCCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCATGGGCAAAGTCCTCGATGCCTTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 90 bp | CTCTTAGCCCTTTTGAGCATGAGTTCCTCAGCTGCAGAACAGGATTaGGAATCCTCACCTGAATTGGCCACTCTGAAAGTGAAAGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: LLALLSMSSSAAEQD*ESSPELATLKVKAS Trigger: GCTAGCTTTCACTTTCAGAGTGGCCAATTCAGGTGAGGATTCTCAATCCTGTTCTGCAGCTGAGGAACTCATGCTCAAAAGGGCTAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 90 bp | AAGAGGGAGTTCTGCAGGACAATTCATTGTAAGGAAGGACTTGGCTaGGGGAGAGAGCTAGGAGGAGGAACAAGTATGTCCTTGATGTTG | + |
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Preference number: 5 (lower is better) Translates to: KREFCRTIHCKEGLG*GRELGGGTSMSLML Trigger: CAACATCAAGGACATACTTGTTCCTCCTCCTAGCTCTCTCCCTCAGCCAAGTCCTTCCTTACAATGAATTGTCCTGCAGAACTCCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 90 bp | TTAAATCCCCTTCCTCAGCAAAAAGGCAAAGAGGGCACAGCTGTTTaGCTTCAGCACTCTCCTCTCTATATCCAACCACATTTAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LNPLPQQKGKEGTAV*LQHSPLYIQPHLGQ Trigger: CTGCCCTAAATGTGGTTGGATATAGAGAGGAGAGTGCTGAAGGCAAACAGCTGTGCCCTCTTTGCCTTTTTGCTGAGGAAGGGGATTTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 90 bp | AGAGCCTTGTGTCTGCTCTGTAATTGGGAGCTTGAGTCCAGTTCATaGTCTGACAGTCCCCATACCCTTTCAGAAAGTAGGTTTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: RALCLLCNWELESSS*SDSPHTLSESRFSV Trigger: GACAGAAAACCTACTTTCTGAAAGGGTATGGGGACTGTCAGAGCATGAACTGGACTCAAGCTCCCAATTACAGAGCAGACACAAGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 90 bp | TCCAGCTGCTGCACTGCTGAACTTGATCTTCATGCTGGAAGAATATaGCAGCTGGAATGGGTCCTAATAATCACCCAGCTCAGTGGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SSCCTAELDLHAGRI*QLEWVLIITQLSGF Trigger: AAAACCACTGAGCTGGGTGATTATTAGGACCCATTCCAGCTGTCATATTCTTCCAGCATGAAGATCAAGTTCAGCAGTGCAGCAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS GCA 90 bp | CGACCTGCTGCTAAAGCTCTAGGCTGTCATCCCATGGTGATCTACTaGTCTATCACTCCGTGTGGTAAATATCAATCAATCACTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: RPAAKALGCHPMVIY*SITPCGKYQSITPS Trigger: AGATGGAGTGATTGATTGATATTTACCACACGGAGTGATAGAGCAGTAGATCACCATGGGATGACAGCCTAGAGCTTTAGCAGCAGGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531049.1 |
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| CDS GCA 90 bp | GTGGCAGAGCTGGGTATAAAGCTCAGAACTCGATTTCCAGCTTCTTaGTTTGTCACACAGAATATGCAACAGGGATTGAAACAGGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VAELGIKLRTRFPAS*FVTQNMQQGLKQEG Trigger: TCCTTCCTGTTTCAATCCCTGTTGCATATTCTGTGTGACAAAGCAAGAAGCTGGAAATCGAGTTCTGAGCTTTATACCCAGCTCTGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 90 bp | GTAAGGAGAGATACTCCAATGAAATTTGGTGTCTCCAGAGAAGAATaGACAACCTGCCATGAGAAACCAGAGGAGGAAGCAGCTGATATT | + |
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Preference number: 5 (lower is better) Translates to: VRRDTPMKFGVSREE*TTCHEKPEEEAADI Trigger: AATATCAGCTGCTTCCTCCTCTGGTTTCTCATGGCAGGTTGTGCATTCTTCTCTGGAGACACCAAATTTCATTGGAGTATCTCTCCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CCA 90 bp | CACACAGAAGGTAAAAGGCAGGGTGGGAACAGGAACCCAGCCTTCTaGCTTTTGAATTTAGGAATCTTTCCATTGTACTGGTGTATTAGA | + |
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Preference number: 5 (lower is better) Translates to: HTEGKRQGGNRNPAF*LLNLGIFPLYWCIR Trigger: TCTAATACACCAGTACAATGGAAAGATTCCTAAATTCAAAAGCCAGAAGGCTGGGTTCCTGTTCCCACCCTGCCTTTTACCTTCTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000318426.6 ENST00000527705.2 ENST00000531049.1 ENST00000532841.5 ENST00000539026.1 |
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| CDS CCA 90 bp | GAGAGAATCCAGGTCCAGATAAGTCATGTGACTTATTCAAGGTCATaGCACATTTGTGGCAGAGCTGGGTATAAAGCTCAGAACTCGATT | + |
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Preference number: 5 (lower is better) Translates to: ERIQVQISHVTYSRS*HICGRAGYKAQNSI Trigger: AATCGAGTTCTGAGCTTTATACCCAGCTCTGCCACAAATGTGCCATGACCTTGAATAAGTCACATGACTTATCTGGACCTGGATTCTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 90 bp | TGCTTCTTTTTCTCAATTAAAGCCGTCTGTCCACTCTTCAGCCTCTaGATCCTCCAAGCAATTCTTTCCTCTAGTCTTAGTGGATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: CFFFSIKAVCPLFSL*ILQAILSSSLSGFP Trigger: GGGAAATCCACTAAGACTAGAGGAAAGAATTGCTTGGAGGATTCAGAGGCTGAAGAGTGGACAGACGGCTTTAATTGAGAAAAAGAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000318426.6 ENST00000527705.2 |
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| CDS GCA 90 bp | GATACTCCAATGAAATTTGGTGTCTCCAGAGAAGAATGCACAACCTaGCATGAGAAACCAGAGGAGGAAGCAGCTGATATTCTAATAAAA | + |
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Preference number: 5 (lower is better) Translates to: DTPMKFGVSREECTT*HEKPEEEAADILIK Trigger: TTTTATTAGAATATCAGCTGCTTCCTCCTCTGGTTTCTCATGGCAGGTTGTGCATTCTTCTCTGGAGACACCAAATTTCATTGGAGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | TGCCCGTGGCTGACAGCCTGCTTGGCACAGTTCCTCCGGAGTCCTTaGGTGATGGAGAACAGGGCTGACAGGATTCAAATGGCCAGATTC | + |
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Preference number: 6 (lower is better) Translates to: CPWLTACLAQFLRSP*VMENRADRIQMARF Trigger: GAATCTGGCCATTTGAATCCTGTCAGCCCTGTTCTCCATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS GCA 72 bp | CTGTGGCTGCAGTTGGCACGTCTTTTTCAGAAAGCTTaGCCGTGGCTGACAGCCTGCTTGGCACAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LWLQLARLFQKA*PWLTACLAQFL Trigger: GAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CCA 72 bp | GCAGACCTTGTCTCTTTGAAGTGTGGGCCTGGAACCTaGCCTGTTTCCCACTCACCTCCACAGCCTCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ADLVSLKCGPGT*PVSHSPPQPLS Trigger: ACTCAGAGGCTGTGGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CCA 72 bp | GTCCAAAGCAGACCTTGTCTCTTTGAAGTGTGGGCCTaGAACCTGGCCTGTTTCCCACTCACCTCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: VQSRPCLFEVWA*NLACFPLTSTA Trigger: GGCTGTGGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGCTTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CAA 90 bp | CCTGGAGCTGCAGAAATCCAGGGATGGCCTGGTGCAGGCAGAGCCTaGTGTCTGCTCTGTAATTGGGAGCTTGAGTCCAGTTCATGCTCT | + |
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Preference number: 6 (lower is better) Translates to: PGAAEIQGWPGAGRA*CLLCNWELESSSCS Trigger: AGAGCATGAACTGGACTCAAGCTCCCAATTACAGAGCAGACACAAGGCTCTGCCTGCACCAGGCCATCCCTGGATTTCTGCAGCTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | TTGGCACGTCTTTTTCAGAAAGCTTGCCCGTGGCTGACAGCCTGCTaGGCACAGTTCCTCCGGAGTCCTTTGGTGATGGAGAACAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LARLFQKACPWLTAC*AQFLRSPLVMENRA Trigger: AGCCCTGTTCTCCATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CAA 90 bp | AATGGACTTTCTGTGGCTGCAGTTGGCACGTCTTTTTCAGAAAGCTaGCCCGTGGCTGACAGCCTGCTTGGCACAGTTCCTCCGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: NGLSVAAVGTSFSES*PVADSLLGTVPPES Trigger: GGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAGAAAGTCCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS TCA 72 bp | CAGCCTGCTTGGCACAGTTCCTCCGGAGTCCTTTGGTaGTGGAGAACAGGGCTGACAGGATTCAAATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPAWHSSSGVLW*WRTGLTGFKWP Trigger: TGGCCATTTGAATCCTGTCAGCCCTGTTCTCCATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS TCA 72 bp | AGTTGGCACGTCTTTTTCAGAAAGCTTGCCCGTGGCTaGCAGCCTGCTTGGCACAGTTCCTCCGGAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SWHVFFRKLARG*QPAWHSSSGVL Trigger: AAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS GCA 72 bp | TATGCCATCTGCAAGCTGGAGGCCCAGGAAAGCTGGTaGCTCCAGTCCAAACCCAAAGGCTTGAGAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: YAICKLEAQESW*LQSKPKGLRIR Trigger: CCTGATTCTCAAGCCTTTGGGTTTGGACTGGAGGCACCAGCTTTCCTGGGCCTCCAGCTTGCAGATGGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318426.6 ENST00000531049.1 ENST00000539026.1 |
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| CDS GCA 72 bp | CGTCTTTTTCAGAAAGCTTGCCCGTGGCTGACAGCCTaGTTGGCACAGTTCCTCCGGAGTCCTTTGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RLFQKACPWLTA*LAQFLRSPLVM Trigger: CATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CCA 72 bp | CCTGGTGCAGGCAGAGCCTTGTGTCTGCTCTGTAATTaGGAGCTTGAGTCCAGTTCATGCTCTGACAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PGAGRALCLLCN*ELESSSCSDSP Trigger: GGGACTGTCAGAGCATGAACTGGACTCAAGCTCCCAATTACAGAGCAGACACAAGGCTCTGCCTGCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 72 bp | CTTTTTCAGAAAGCTTGCCCGTGGCTGACAGCCTGCTaGGCACAGTTCCTCCGGAGTCCTTTGGTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: LFQKACPWLTAC*AQFLRSPLVME Trigger: CTCCATCACCAAAGGACTCCGGAGGAACTGTGCCAAGCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS GCA 72 bp | CTCTTCCAGGGAACGATTCCTCATTCCCAAATCTGTTaGTCCACAGCCTCTGAGTCCCTCCAAGCAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LFQGTIPHSQIC*STASESLQAGQ Trigger: CTGACCTGCTTGGAGGGACTCAGAGGCTGTGGAGCAACAGATTTGGGAATGAGGAATCGTTCCCTGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000318426.6 ENST00000527705.2 |
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| CDS CCA 72 bp | AAAACAGTCCAAAGCAGACCTTGTCTCTTTGAAGTGTaGGCCTGGAACCTGGCCTGTTTCCCACTCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: KTVQSRPCLFEV*AWNLACFPLTS Trigger: GGAGGTGAGTGGGAAACAGGCCAGGTTCCAGGCCCACACTTCAAAGAGACAAGGTCTGCTTTGGACTGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CAA 90 bp | CTGGAGGCCCAGGAAAGCTGGTGCCTCCAGTCCAAACCCAAAGGCTaGAGAATCAGGAGTTCTGATGTCCAAGATCAGGAGAAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: LEAQESWCLQSKPKG*RIRSSDVQDQEKDE Trigger: TTCATCTTTCTCCTGATCTTGGACATCAGAACTCCTGATTCTCAAGCCTTTGGGTTTGGACTGGAGGCACCAGCTTTCCTGGGCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318426.6 ENST00000531049.1 ENST00000539026.1 |
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| CDS CAA 90 bp | AAACCACCAGGAAAGGCATCGAGGACTTTGCCCATGCCAGGGAGCTaGCAGTGTGAGATAAAACTGTGTTTGAATCTGAGGCGGGAGCAT | + |
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Preference number: 6 (lower is better) Translates to: KPPGKASRTLPMPGS*QCEIKLCLNLRREH Trigger: ATGCTCCCGCCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCATGGGCAAAGTCCTCGATGCCTTTCCTGGTGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 72 bp | ATCGAGGACTTTGCCCATGCCAGGGAGCTTGCAGTGTaGGATAAAACTGTGTTTGAATCTGAGGCGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: IEDFAHARELAV*DKTVFESEAGA Trigger: TGCTCCCGCCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCATGGGCAAAGTCCTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 72 bp | AGGAAAGCTGGTGCCTCCAGTCCAAACCCAAAGGCTTaGGAATCAGGAGTTCTGATGTCCAAGATCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RKAGASSPNPKA*ESGVLMSKIRR Trigger: TCTCCTGATCTTGGACATCAGAACTCCTGATTCTCAAGCCTTTGGGTTTGGACTGGAGGCACCAGCTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318426.6 ENST00000531049.1 ENST00000539026.1 |
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| CDS CAA 72 bp | GGAAAGGCATCGAGGACTTTGCCCATGCCAGGGAGCTaGCAGTGTGAGATAAAACTGTGTTTGAATCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: GKASRTLPMPGS*QCEIKLCLNLR Trigger: CCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCATGGGCAAAGTCCTCGATGCCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS TCA 72 bp | TTCTGCAGGACAATTCATTGTAAGGAAGGACTTGGCTaGGGGAGAGAGCTAGGAGGAGGAACAAGTATGTCC | + |
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Preference number: 6 (lower is better) Translates to: FCRTIHCKEGLG*GRELGGGTSMS Trigger: GGACATACTTGTTCCTCCTCCTAGCTCTCTCCCTCAGCCAAGTCCTTCCTTACAATGAATTGTCCTGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 72 bp | TGTCTGCTCTGTAATTGGGAGCTTGAGTCCAGTTCATaGTCTGACAGTCCCCATACCCTTTCAGAAAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: CLLCNWELESSS*SDSPHTLSESR Trigger: CCTACTTTCTGAAAGGGTATGGGGACTGTCAGAGCATGAACTGGACTCAAGCTCCCAATTACAGAGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 72 bp | AAGTTATTCAAGGGAATGGACTTTCTGTGGCTGCAGTaGGCACGTCTTTTTCAGAAAGCTTGCCCGTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLFKGMDFLWLQ*ARLFQKACPWL Trigger: CAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAGAAAGTCCATTCCCTTGAATAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CAA 90 bp | ATATTAGCAAAGTTATTCAAGGGAATGGACTTTCTGTGGCTGCAGTaGGCACGTCTTTTTCAGAAAGCTTGCCCGTGGCTGACAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: ILAKLFKGMDFLWLQ*ARLFQKACPWLTAC Trigger: GCAGGCTGTCAGCCACGGGCAAGCTTTCTGAAAAAGACGTGCCAACTGCAGCCACAGAAAGTCCATTCCCTTGAATAACTTTGCTAATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000539026.1 |
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| CDS CAA 90 bp | CCCAGAAGTTCAGACCTCCAGAGCAAACAGGTAGCAACAGATGACTaGAATGAGAGAGGGATCTCTGATTTGGCTACCATGTCCACTAAC | + |
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Preference number: 6 (lower is better) Translates to: PRSSDLQSKQVATDD*NERGISDLATMSTN Trigger: GTTAGTGGACATGGTAGCCAAATCAGAGATCCCTCTCTCATTCAAGTCATCTGTTGCTACCTGTTTGCTCTGGAGGTCTGAACTTCTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CCA 72 bp | GGTAAAAGGCAGGGTGGGAACAGGAACCCAGCCTTCTaGCTTTTGAATTTAGGAATCTTTCCATTGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: GKRQGGNRNPAF*LLNLGIFPLYW Trigger: CCAGTACAATGGAAAGATTCCTAAATTCAAAAGCCAGAAGGCTGGGTTCCTGTTCCCACCCTGCCTTTTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000318426.6 ENST00000527705.2 ENST00000531049.1 ENST00000532841.5 ENST00000539026.1 |
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| CDS CAA 72 bp | ATGCCAGGGAGCTTGCAGTGTGAGATAAAACTGTGTTaGAATCTGAGGCGGGAGCATCATTTTCCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: MPGSLQCEIKLC*NLRREHHFPVI Trigger: GATCACAGGAAAATGATGCTCCCGCCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 72 bp | TCAGACCTCCAGAGCAAACAGGTAGCAACAGATGACTaGAATGAGAGAGGGATCTCTGATTTGGCTACCATG | + |
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Preference number: 6 (lower is better) Translates to: SDLQSKQVATDD*NERGISDLATM Trigger: CATGGTAGCCAAATCAGAGATCCCTCTCTCATTCAAGTCATCTGTTGCTACCTGTTTGCTCTGGAGGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CAA 90 bp | TGTGGCAGAGCTGGGTATAAAGCTCAGAACTCGATTTCCAGCTTCTaGCTTTGTCACACAGAATATGCAACAGGGATTGAAACAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: CGRAGYKAQNSISSF*LCHTEYATGIETGR Trigger: CCTTCCTGTTTCAATCCCTGTTGCATATTCTGTGTGACAAAGCAAGAAGCTGGAAATCGAGTTCTGAGCTTTATACCCAGCTCTGCCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | AAACAGGTAGCAACAGATGACTTGAATGAGAGAGGGATCTCTGATTaGGCTACCATGTCCACTAACTCAAGCCCAAACTCATACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: KQVATDDLNERGISD*ATMSTNSSPNSYHL Trigger: GAGGTGGTATGAGTTTGGGCTTGAGTTAGTGGACATGGTAGCCAAATCAGAGATCCCTCTCTCATTCAAGTCATCTGTTGCTACCTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS TCA 72 bp | TGCACTGCTGAACTTGATCTTCATGCTGGAAGAATATaGCAGCTGGAATGGGTCCTAATAATCACCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: CTAELDLHAGRI*QLEWVLIITQL Trigger: GAGCTGGGTGATTATTAGGACCCATTCCAGCTGTCATATTCTTCCAGCATGAAGATCAAGTTCAGCAGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS GCA 72 bp | GATACTCCAATGAAATTTGGTGTCTCCAGAGAAGAATaGACAACCTGCCATGAGAAACCAGAGGAGGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: DTPMKFGVSREE*TTCHEKPEEEA Trigger: TGCTTCCTCCTCTGGTTTCTCATGGCAGGTTGTGCATTCTTCTCTGGAGACACCAAATTTCATTGGAGTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CCA 72 bp | CAGGTCCAGATAAGTCATGTGACTTATTCAAGGTCATaGCACATTTGTGGCAGAGCTGGGTATAAAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QVQISHVTYSRS*HICGRAGYKAQ Trigger: CTGAGCTTTATACCCAGCTCTGCCACAAATGTGCCATGACCTTGAATAAGTCACATGACTTATCTGGACCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | CACATCAGGGAAAATGGGGTGCCCATCACCTCAAGGATTTATCATTaGTTTAAGCCAGCATCTACTTTACAATTCCTCATCTCCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HIRENGVPITSRIYH*FKPASTLQFLISQG Trigger: GCCTTGGGAGATGAGGAATTGTAAAGTAGATGCTGGCTTAAACAAATGATAAATCCTTGAGGTGATGGGCACCCCATTTTCCCTGATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | ACTTTGCCCATGCCAGGGAGCTTGCAGTGTGAGATAAAACTGTGTTaGAATCTGAGGCGGGAGCATCATTTTCCTGTGATCCAAATTAAA | + |
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Preference number: 6 (lower is better) Translates to: TLPMPGSLQCEIKLC*NLRREHHFPVIQIK Trigger: TTTAATTTGGATCACAGGAAAATGATGCTCCCGCCTCAGATTCAAACACAGTTTTATCTCACACTGCAAGCTCCCTGGCATGGGCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 72 bp | ATGAAATTTGGTGTCTCCAGAGAAGAATGCACAACCTaGCATGAGAAACCAGAGGAGGAAGCAGCTGATATT | + |
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Preference number: 6 (lower is better) Translates to: MKFGVSREECTT*HEKPEEEAADI Trigger: AATATCAGCTGCTTCCTCCTCTGGTTTCTCATGGCAGGTTGTGCATTCTTCTCTGGAGACACCAAATTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 72 bp | GCTAAAGCTCTAGGCTGTCATCCCATGGTGATCTACTaGTCTATCACTCCGTGTGGTAAATATCAATCAATC | + |
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Preference number: 6 (lower is better) Translates to: AKALGCHPMVIY*SITPCGKYQSI Trigger: GATTGATTGATATTTACCACACGGAGTGATAGAGCAGTAGATCACCATGGGATGACAGCCTAGAGCTTTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531049.1 |
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| CDS CCA 72 bp | TCCTTGAAGGATGCTTGGAGTAGAAGGCCCACCACCTaGCCTGTTCTAGACTATTTACATGAAAGAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: SLKDAWSRRPTT*PVLDYLHEREK Trigger: TTTTTCTCTTTCATGTAAATAGTCTAGAACAGGCCAGGTGGTGGGCCTTCTACTCCAAGCATCCTTCAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CAA 72 bp | GCTGGGTATAAAGCTCAGAACTCGATTTCCAGCTTCTaGCTTTGTCACACAGAATATGCAACAGGGATTGAA | + |
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Preference number: 6 (lower is better) Translates to: AGYKAQNSISSF*LCHTEYATGIE Trigger: TTCAATCCCTGTTGCATATTCTGTGTGACAAAGCAAGAAGCTGGAAATCGAGTTCTGAGCTTTATACCCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS GCA 72 bp | CTGGGTATAAAGCTCAGAACTCGATTTCCAGCTTCTTaGTTTGTCACACAGAATATGCAACAGGGATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LGIKLRTRFPAS*FVTQNMQQGLK Trigger: TTTCAATCCCTGTTGCATATTCTGTGTGACAAAGCAAGAAGCTGGAAATCGAGTTCTGAGCTTTATACCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 72 bp | CCAGCCTTCTGGCTTTTGAATTTAGGAATCTTTCCATaGTACTGGTGTATTAGAGTTCTGCAGGAGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: PAFWLLNLGIFP*YWCIRVLQENS Trigger: TGAGTTCTCCTGCAGAACTCTAATACACCAGTACAATGGAAAGATTCCTAAATTCAAAAGCCAGAAGGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS CAA 72 bp | GAAAATGGGGTGCCCATCACCTCAAGGATTTATCATTaGTTTAAGCCAGCATCTACTTTACAATTCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: ENGVPITSRIYH*FKPASTLQFLI Trigger: GATGAGGAATTGTAAAGTAGATGCTGGCTTAAACAAATGATAAATCCTTGAGGTGATGGGCACCCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 90 bp | AACAGGAACCCAGCCTTCTGGCTTTTGAATTTAGGAATCTTTCCATaGTACTGGTGTATTAGAGTTCTGCAGGAGAACTCATTTAGATTT | + |
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Preference number: 6 (lower is better) Translates to: NRNPAFWLLNLGIFP*YWCIRVLQENSFRF Trigger: AAATCTAAATGAGTTCTCCTGCAGAACTCTAATACACCAGTACAATGGAAAGATTCCTAAATTCAAAAGCCAGAAGGCTGGGTTCCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532841.5 |
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| CDS GCA 72 bp | ATGCTATGTGTAATAATCACATCAGGGAAAATGGGGTaGCCATCACCTCAAGGATTTATCATTTGTTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: MLCVIITSGKMG*PSPQGFIICLS Trigger: GCTTAAACAAATGATAAATCCTTGAGGTGATGGGCACCCCATTTTCCCTGATGTGATTATTACACATAGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318426.6 |
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| CDS CAA 72 bp | ATCTTTCCATTGTACTGGTGTATTAGAGTTATGAATTaGGAGGCTGAGAAGTTCCATGATATGCCATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: IFPLYWCIRVMN*EAEKFHDMPSA Trigger: TGCAGATGGCATATCATGGAACTTCTCAGCCTCCAAATTCATAACTCTAATACACCAGTACAATGGAAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000318426.6 ENST00000531049.1 ENST00000539026.1 |
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| CDS CAA 72 bp | CCAGCCTTCTGGCTTTTGAATTTAGGAATCTTTCCATaGTACTGGTGTATTAGAGTTATGAATTTGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PAFWLLNLGIFP*YWCIRVMNLEA Trigger: AGCCTCCAAATTCATAACTCTAATACACCAGTACAATGGAAAGATTCCTAAATTCAAAAGCCAGAAGGCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000318426.6 ENST00000531049.1 ENST00000539026.1 |
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