RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01537 (Homo sapiens)

Ensembl gene IDs: ENSG00000227467

Ensembl transcript IDs: ENST00000450804.3

Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAGGCCCATCAGTTCTACCTTAGTGAGATCCCTGGAGGTGGTACCTaGCTGATGAGCGGTCTCCCTCTGCAGAACGGTCCCTGGGAAGGC +
Preference number: 5 (lower is better)
Translates to: EAHQFYLSEIPGGGT*LMSGLPLQNGPWEG
Trigger: GCCTTCCCAGGGACCGTTCTGCAGAGGGAGACCGCTCATCAGGCAGGTACCACCTCCAGGGATCTCACTAAGGTAGAACTGATGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 90 bp CCCTCTGCAGAACGGTCCCTGGGAAGGCAGAGCCAGCCTTGCGTGTaGACAGGGATAGGCAGAAATGATGCTTCCCTCACCCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: PSAERSLGRQSQPCV*TGIGRNDASLTPSL
Trigger: CAGAGAAGGGGTGAGGGAAGCATCATTTCTGCCTATCCCTGTTCACACGCAAGGCTGGCTCTGCCTTCCCAGGGACCGTTCTGCAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 90 bp CAAGATGTATCCCGACCACCTTGGGCACATGTTCTCAGGACCTCCTaGGGGCTGTGTCACAGGCCACGGTCACTCATATTTGGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: QDVSRPPWAHVLRTS*GLCHRPRSLIFGSE
Trigger: TTCTGAGCCAAATATGAGTGACCGTGGCCTGTGACACAGCCCTCAGGAGGTCCTGAGAACATGTGCCCAAGGTGGTCGGGATACATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 90 bp TTCCCTCACCCCTTCTCTGTGCAGGAAATAACTACTAGAGAGCATTaGAAGGCTTGGTGCTGTGCTGGTGAGGGCGGACGTCATGACAGG +
Preference number: 5 (lower is better)
Translates to: FPHPFSVQEITTREH*KAWCCAGEGGRHDR
Trigger: CCTGTCATGACGTCCGCCCTCACCAGCACAGCACCAAGCCTTGCAATGCTCTCTAGTAGTTATTTCCTGCACAGAGAAGGGGTGAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 90 bp CAAGAGTTGTCCCCATACAGCGAATCCCTGCTCTTCAGCACTCTTTaGAATGCCTCTGGGCTTTCCTTTCTATCCTGGCAGGATGAGTGT +
Preference number: 5 (lower is better)
Translates to: QELSPYSESLLFSTL*NASGLSFLSWQDEC
Trigger: ACACTCATCCTGCCAGGATAGAAAGGAAAGCCCAGAGGCATTGCAAAGAGTGCTGAAGAGCAGGGATTCGCTGTATGGGGACAACTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 90 bp AGTAGATGCTATTTTCATAACCTTGGTTGCAGTCTCTTGGGAGGGTaGCAAGTCCAGGCAGGTGAAGGAGTTGAAGGTCTCCTCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SRCYFHNLGCSLLGG*QVQAGEGVEGLLRA
Trigger: TGCTCGGAGGAGACCTTCAACTCCTTCACCTGCCTGGACTTGGCACCCTCCCAAGAGACTGCAACCAAGGTTATGAAAATAGCATCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 90 bp ATGGAAACTGTTTCTTGGAGGCCTCCAGCCTGTATAGCTGTTCTCTaGACAGAACTGAGGCCCATCAGTTCTACCTTAGTGAGATCCCTG +
Preference number: 5 (lower is better)
Translates to: METVSWRPPACIAVL*TELRPISSTLVRSL
Trigger: CAGGGATCTCACTAAGGTAGAACTGATGGGCCTCAGTTCTGTTCAGAGAACAGCTATACAGGCTGGAGGCCTCCAAGAAACAGTTTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 90 bp TGTCCTGAAACACAAAGCAAGAGTTGTCCCCATACAGCGAATCCCTaGTCTTCAGCACTCTTTGCAATGCCTCTGGGCTTTCCTTTCTAT +
Preference number: 5 (lower is better)
Translates to: CPETQSKSCPHTANP*SSALFAMPLGFPFY
Trigger: ATAGAAAGGAAAGCCCAGAGGCATTGCAAAGAGTGCTGAAGAGCAGGGATTCGCTGTATGGGGACAACTCTTGCTTTGTGTTTCAGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CCA 90 bp TGCAATGCCTCTGGGCTTTCCTTTCTATCCTGGCAGGATGAGTGTTaGGATTCCTCACTGGTCTTAGTTTTCCTGTCCATTAACTTGAAG +
Preference number: 5 (lower is better)
Translates to: CNASGLSFLSWQDEC*DSSLVLVFLSINLK
Trigger: CTTCAAGTTAATGGACAGGAAAACTAAGACCAGTGAGGAATCCCAACACTCATCCTGCCAGGATAGAAAGGAAAGCCCAGAGGCATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CCA 90 bp TATATTTCCGTGCCATACCTTGAAATTGCCCTGCAAAGTCTCTTGTaGGAAAAATCCACATTCTATAGAGATTCCCCTTCCGCCTTTGTT +
Preference number: 5 (lower is better)
Translates to: YISVPYLEIALQSLL*EKSTFYRDSPSAFV
Trigger: AACAAAGGCGGAAGGGGAATCTCTATAGAATGTGGATTTTTCCCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCACGGAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 90 bp CACCCTTTTAAGTCCGATAAGAGACAATTTACAACTTGCTCTGTCTaGAGTCTGCTATCTGAGAGCTTCCTCTGCACAATAAAACTTGGT +
Preference number: 5 (lower is better)
Translates to: HPFKSDKRQFTTCSV*SLLSESFLCTIKLG
Trigger: ACCAAGTTTTATTGTGCAGAGGAAGCTCTCAGATAGCAGACTTCAGACAGAGCAAGTTGTAAATTGTCTCTTATCGGACTTAAAAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 90 bp GTTGCAGTCTCTTGGGAGGGTGCCAAGTCCAGGCAGGTGAAGGAGTaGAAGGTCTCCTCCGAGCAGGAGCTAAGCCCTCCCCCTCTAGTC +
Preference number: 6 (lower is better)
Translates to: VAVSWEGAKSRQVKE*KVSSEQELSPPPLV
Trigger: GACTAGAGGGGGAGGGCTTAGCTCCTGCTCGGAGGAGACCTTCAACTCCTTCACCTGCCTGGACTTGGCACCCTCCCAAGAGACTGCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 72 bp GAACGGTCCCTGGGAAGGCAGAGCCAGCCTTGCGTGTaGACAGGGATAGGCAGAAATGATGCTTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: ERSLGRQSQPCV*TGIGRNDASLT
Trigger: GGTGAGGGAAGCATCATTTCTGCCTATCCCTGTTCACACGCAAGGCTGGCTCTGCCTTCCCAGGGACCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 72 bp CAGTTCTACCTTAGTGAGATCCCTGGAGGTGGTACCTaGCTGATGAGCGGTCTCCCTCTGCAGAACGGTCCC +
Preference number: 6 (lower is better)
Translates to: QFYLSEIPGGGT*LMSGLPLQNGP
Trigger: GGGACCGTTCTGCAGAGGGAGACCGCTCATCAGGCAGGTACCACCTCCAGGGATCTCACTAAGGTAGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 90 bp GGTGAGGCAGGTCTTGGAGTTTGGATGAGGAGGACGGGAAAGGACTaGAGGACATTGCAGATAGACCAGGAAGGCAGGCTGGGAGGTGAG +
Preference number: 6 (lower is better)
Translates to: GEAGLGVWMRRTGKD*RTLQIDQEGRLGGE
Trigger: CTCACCTCCCAGCCTGCCTTCCTGGTCTATCTGCAATGTCCTCAAGTCCTTTCCCGTCCTCCTCATCCAAACTCCAAGACCTGCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 72 bp CAGGAAATAACTACTAGAGAGCATTGCAAGGCTTGGTaGTGTGCTGGTGAGGGCGGACGTCATGACAGGGAG +
Preference number: 6 (lower is better)
Translates to: QEITTREHCKAW*CAGEGGRHDRE
Trigger: CTCCCTGTCATGACGTCCGCCCTCACCAGCACAGCACCAAGCCTTGCAATGCTCTCTAGTAGTTATTTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 72 bp CCCTTCTCTGTGCAGGAAATAACTACTAGAGAGCATTaGAAGGCTTGGTGCTGTGCTGGTGAGGGCGGACGT +
Preference number: 6 (lower is better)
Translates to: PFSVQEITTREH*KAWCCAGEGGR
Trigger: ACGTCCGCCCTCACCAGCACAGCACCAAGCCTTGCAATGCTCTCTAGTAGTTATTTCCTGCACAGAGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CCA 72 bp GTGCAGGAAATAACTACTAGAGAGCATTGCAAGGCTTaGTGCTGTGCTGGTGAGGGCGGACGTCATGACAGG +
Preference number: 6 (lower is better)
Translates to: VQEITTREHCKA*CCAGEGGRHDR
Trigger: CCTGTCATGACGTCCGCCCTCACCAGCACAGCACCAAGCCTTGCAATGCTCTCTAGTAGTTATTTCCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 72 bp GGTCTTGGAGTTTGGATGAGGAGGACGGGAAAGGACTaGAGGACATTGCAGATAGACCAGGAAGGCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GLGVWMRRTGKD*RTLQIDQEGRL
Trigger: CAGCCTGCCTTCCTGGTCTATCTGCAATGTCCTCAAGTCCTTTCCCGTCCTCCTCATCCAAACTCCAAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 72 bp GTCCCCATACAGCGAATCCCTGCTCTTCAGCACTCTTaGCAATGCCTCTGGGCTTTCCTTTCTATCCTGGCA +
Preference number: 6 (lower is better)
Translates to: VPIQRIPALQHS*QCLWAFLSILA
Trigger: TGCCAGGATAGAAAGGAAAGCCCAGAGGCATTGCAAAGAGTGCTGAAGAGCAGGGATTCGCTGTATGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 72 bp GTTTCTTGGAGGCCTCCAGCCTGTATAGCTGTTCTCTaGACAGAACTGAGGCCCATCAGTTCTACCTTAGTG +
Preference number: 6 (lower is better)
Translates to: VSWRPPACIAVL*TELRPISSTLV
Trigger: CACTAAGGTAGAACTGATGGGCCTCAGTTCTGTTCAGAGAACAGCTATACAGGCTGGAGGCCTCCAAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 72 bp ACACAAAGCAAGAGTTGTCCCCATACAGCGAATCCCTaGTCTTCAGCACTCTTTGCAATGCCTCTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: TQSKSCPHTANP*SSALFAMPLGF
Trigger: AAAGCCCAGAGGCATTGCAAAGAGTGCTGAAGAGCAGGGATTCGCTGTATGGGGACAACTCTTGCTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 72 bp CCATACAGACTCCTCAGGGAAAATGGAAACTGTTTCTaGGAGGCCTCCAGCCTGTATAGCTGTTCTCTGAAC +
Preference number: 6 (lower is better)
Translates to: PYRLLRENGNCF*EASSLYSCSLN
Trigger: GTTCAGAGAACAGCTATACAGGCTGGAGGCCTCCAAGAAACAGTTTCCATTTTCCCTGAGGAGTCTGTATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 90 bp AGTACACATCCATACAGACTCCTCAGGGAAAATGGAAACTGTTTCTaGGAGGCCTCCAGCCTGTATAGCTGTTCTCTGAACAGAACTGAG +
Preference number: 6 (lower is better)
Translates to: STHPYRLLRENGNCF*EASSLYSCSLNRTE
Trigger: CTCAGTTCTGTTCAGAGAACAGCTATACAGGCTGGAGGCCTCCAAGAAACAGTTTCCATTTTCCCTGAGGAGTCTGTATGGATGTGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 72 bp AGTTTGACTCTCCATCAACAGAATGCTGCACCTATATaGCCCTCTCACACTCACAAACACAGAGGCATTCTC +
Preference number: 6 (lower is better)
Translates to: SLTLHQQNAAPI*PSHTHKHRGIL
Trigger: GAGAATGCCTCTGTGTTTGTGAGTGTGAGAGGGTCATATAGGTGCAGCATTCTGTTGATGGAGAGTCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CCA 72 bp GTGCCATACCTTGAAATTGCCCTGCAAAGTCTCTTGTaGGAAAAATCCACATTCTATAGAGATTCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: VPYLEIALQSLL*EKSTFYRDSPS
Trigger: GGAAGGGGAATCTCTATAGAATGTGGATTTTTCCCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 72 bp TCCGTGCCATACCTTGAAATTGCCCTGCAAAGTCTCTaGTGGGAAAAATCCACATTCTATAGAGATTCCCCT +
Preference number: 6 (lower is better)
Translates to: SVPYLEIALQSL*WEKSTFYRDSP
Trigger: AGGGGAATCTCTATAGAATGTGGATTTTTCCCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCACGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 72 bp AAGTCCGATAAGAGACAATTTACAACTTGCTCTGTCTaGAGTCTGCTATCTGAGAGCTTCCTCTGCACAATA +
Preference number: 6 (lower is better)
Translates to: KSDKRQFTTCSV*SLLSESFLCTI
Trigger: TATTGTGCAGAGGAAGCTCTCAGATAGCAGACTTCAGACAGAGCAAGTTGTAAATTGTCTCTTATCGGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 90 bp AAATATATTTCCGTGCCATACCTTGAAATTGCCCTGCAAAGTCTCTaGTGGGAAAAATCCACATTCTATAGAGATTCCCCTTCCGCCTTT +
Preference number: 6 (lower is better)
Translates to: KYISVPYLEIALQSL*WEKSTFYRDSPSAF
Trigger: AAAGGCGGAAGGGGAATCTCTATAGAATGTGGATTTTTCCCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCACGGAAATATATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS TCA 72 bp ACAATTTACAACTTGCTCTGTCTGAAGTCTGCTATCTaGGAGCTTCCTCTGCACAATAAAACTTGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: TIYNLLCLKSAI*ELPLHNKTWSL
Trigger: TAGAGACCAAGTTTTATTGTGCAGAGGAAGCTCTCAGATAGCAGACTTCAGACAGAGCAAGTTGTAAATTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CAA 90 bp ACATTCCTTTCTATGGATCCCAGGTCTTTAGACAAACTCAAACAATaGTCAACCAGAAAATGTTTAAATTTACCTATAGCCTGGAAGCCC +
Preference number: 6 (lower is better)
Translates to: TFLSMDPRSLDKLKQ*STRKCLNLPIAWKP
Trigger: GGGCTTCCAGGCTATAGGTAAATTTAAACATTTTCTGGTTGACAATTGTTTGAGTTTGTCTAAAGACCTGGGATCCATAGAAAGGAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS GCA 72 bp CAAAATATATTTCCGTGCCATACCTTGAAATTGCCCTaGAAAGTCTCTTGTGGGAAAAATCCACATTCTATA +
Preference number: 6 (lower is better)
Translates to: QNIFPCHTLKLP*KVSCGKNPHSI
Trigger: TATAGAATGTGGATTTTTCCCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCACGGAAATATATTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450804.3
CDS CCA 72 bp GAAGTCATGCCCTACAAACCATACATTCTCATCAGATaGGTTTTATTTGACCCTATATGTTGTGATTTACTT +
Preference number: 6 (lower is better)
Translates to: EVMPYKPYILIR*VLFDPICCDLL
Trigger: AAGTAAATCACAACATATAGGGTCAAATAAAACCCATCTGATGAGAATGTATGGTTTGTAGGGCATGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450804.3