Pregenerated sensors for LINC01517 (Homo sapiens)
Ensembl gene IDs: ENSG00000232624Ensembl transcript IDs: ENST00000375520.4, ENST00000426922.6, ENST00000603866.1, ENST00000611112.4, ENST00000614533.3, ENST00000616194.4, ENST00000621861.1, ENST00000643204.1, ENST00000644731.1, ENST00000645413.1, ENST00000646289.1, ENST00000647111.1, ENST00000653558.1, ENST00000655545.1, ENST00000659813.1, ENST00000660375.1, ENST00000665621.1
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS TCA 90 bp | AGGAGCCTGGCAGGGAGAGGGCACCGTGGTGCCGACTTTCCAGGCTaGCTCGCCGTTGCATTTGCAAACCTGGGGCTCCCCAGCCATCCC | + |
Preference number: 5 (lower is better) Translates to: RSLAGRGHRGADFPG*LAVAFANLGLPSHP Trigger: GGGATGGCTGGGGAGCCCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS GCA 90 bp | CTGGGAATTTCTTGGAAGGAGCCTGGCAGGGAGAGGGCACCGTGGTaGCGACTTTCCAGGCTGACTCGCCGTTGCATTTGCAAACCTGGG | + |
Preference number: 5 (lower is better) Translates to: LGISWKEPGRERAPW*RLSRLTRRCICKPG Trigger: CCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 90 bp | GTGGTGCCGACTTTCCAGGCTGACTCGCCGTTGCATTTGCAAACCTaGGGCTCCCCAGCCATCCCCACAGAGCTGCTGAATAGGTTGCTA | + |
Preference number: 5 (lower is better) Translates to: VVPTFQADSPLHLQT*GSPAIPTELLNRLL Trigger: TAGCAACCTATTCAGCAGCTCTGTGGGGATGGCTGGGGAGCCCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS TCA 90 bp | TGCTGCTGCCTTTCCAAAGGGCTCAGTGTGTGCACTCCCAGGGAATaGGCCATCCAAGCCGCAATCCTGAGCCCAAGAAAAGCACCACCG | + |
Preference number: 5 (lower is better) Translates to: CCCLSKGLSVCTPRE*AIQAAILSPRKAPP Trigger: CGGTGGTGCTTTTCTTGGGCTCAGGATTGCGGCTTGGATGGCTCATTCCCTGGGAGTGCACACACTGAGCCCTTTGGAAAGGCAGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS GCA 90 bp | TCACTGCCTGCTAGGTCTCTCCCAGATCCTCAGGCAGCTGCTGACTaGCACCACAACAGACCCCTCACCTCCACTCTGATGGCAAAACTG | + |
Preference number: 5 (lower is better) Translates to: SLPARSLPDPQAAAD*HHNRPLTSTLMAKL Trigger: CAGTTTTGCCATCAGAGTGGAGGTGAGGGGTCTGTTGTGGTGGCAGTCAGCAGCTGCCTGAGGATCTGGGAGAGACCTAGCAGGCAGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS GCA 90 bp | TGGTCCCACAGGAAAATTATGAGGTCACAGAGCTCTGAGGCCCCTTaGCATCCACTGTCCTCACTGCCTGCTAGGTCTCTCCCAGATCCT | + |
Preference number: 5 (lower is better) Translates to: WSHRKIMRSQSSEAP*HPLSSLPARSLPDP Trigger: AGGATCTGGGAGAGACCTAGCAGGCAGTGAGGACAGTGGATGGCAAGGGGCCTCAGAGCTCTGTGACCTCATAATTTTCCTGTGGGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CCA 90 bp | TGTTTAATAAACAGCAGGGTAGCTGGGAATTTCTTGGAAGGAGCCTaGCAGGGAGAGGGCACCGTGGTGCCGACTTTCCAGGCTGACTCG | + |
Preference number: 5 (lower is better) Translates to: CLINSRVAGNFLEGA*QGEGTVVPTFQADS Trigger: CGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTTTATTAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS TCA 90 bp | TCAGTGTGTGCACTCCCAGGGAATGAGCCATCCAAGCCGCAATCCTaGGCCCAAGAAAAGCACCACCGAGCCTCCGCAGGAAAAATAAGT | + |
Preference number: 5 (lower is better) Translates to: SVCALPGNEPSKPQS*AQEKHHRASAGKIS Trigger: ACTTATTTTTCCTGCGGAGGCTCGGTGGTGCTTTTCTTGGGCTCAGGATTGCGGCTTGGATGGCTCATTCCCTGGGAGTGCACACACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS TCA 90 bp | CCAGCACGTTCAGTGGCTGAGGTGGGAAGATCCAGGTCAGGAGTCTaGGATCAGCCTGGGCGACATGTGGAAATCCTGTCTATACAGGAA | + |
Preference number: 5 (lower is better) Translates to: PARSVAEVGRSRSGV*DQPGRHVEILSIQE Trigger: TTCCTGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660375.1 |
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CDS CCA 90 bp | GGAGGCACAGCTGATAACCACTATGCACTGTGGAAGCCACCTTTGTaGTCCCACAGGAAAATTATGAGGTCACAGAGCTCTGAGGCCCCT | + |
Preference number: 5 (lower is better) Translates to: GGTADNHYALWKPPL*SHRKIMRSQSSEAP Trigger: AGGGGCCTCAGAGCTCTGTGACCTCATAATTTTCCTGTGGGACCACAAAGGTGGCTTCCACAGTGCATAGTGGTTATCAGCTGTGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CCA 90 bp | GGTCTCACACCTGCTTCTTTGTGTCAGATTTCCCTTCGAGGACTCTaGACTCCGAGGACCTCTAAGAGGGAGGCACAGCTGATAACCACT | + |
Preference number: 5 (lower is better) Translates to: GLTPASLCQISLRGL*TPRTSKREAQLITT Trigger: AGTGGTTATCAGCTGTGCCTCCCTCTTAGAGGTCCTCGGAGTCCAGAGTCCTCGAAGGGAAATCTGACACAAAGAAGCAGGTGTGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CCA 90 bp | TGGGAAGATCCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATACTTGTCCCAGCTCTTCTGGACACAGCCA | + |
Preference number: 5 (lower is better) Translates to: WEDPGQESEISLGDM*KSCLYLSQLFWTQP Trigger: TGGCTGTGTCCAGAAGAGCTGGGACAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS TCA 90 bp | AGAGTCAATGTTGTCAGCCTCAATTTGAAGCAGAAGGCCTGGGAATaGGAGGAGAATGGGGCTCAGAGGGTGCTGGAGCAAGTCTGGAGT | + |
Preference number: 5 (lower is better) Translates to: RVNVVSLNLKQKAWE*EENGAQRVLEQVWS Trigger: ACTCCAGACTTGCTCCAGCACCCTCTGAGCCCCATTCTCCTCTCATTCCCAGGCCTTCTGCTTCAAATTGAGGCTGACAACATTGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000611112.4 ENST00000621861.1 |
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CDS TCA 90 bp | CCAGCACGTTCAGTGGCTGAGGTGGGAAGATCCAGGTCAGGAGTCTaGGATCAGCCTGGGCGACATGTGGAAATCCTGTCTATACAATTA | + |
Preference number: 5 (lower is better) Translates to: PARSVAEVGRSRSGV*DQPGRHVEILSIQL Trigger: TAATTGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000621861.1 |
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CDS GCA 90 bp | ACGTGGTCTGGACTTCGTCACAAGATGGCCGGCTCAGGGTCCTGTTaGAGGTATCCCAGTGAACAAGGTGAAAACTGTGTCACTTTTTCC | + |
Preference number: 5 (lower is better) Translates to: TWSGLRHKMAGSGSC*RYPSEQGENCVTFS Trigger: GGAAAAAGTGACACAGTTTTCACCTTGTTCACTGGGATACCTGCAACAGGACCCTGAGCCGGCCATCTTGTGACGAAGTCCAGACCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS CCA 90 bp | CCCTGTGCTTTCTTTACTGAGCTGTTTAATAAACAGCAGGGTAGCTaGGAATTTCTTGGAAGGAGCCTGGCAGGGAGAGGGCACCGTGGT | + |
Preference number: 5 (lower is better) Translates to: PCAFFTELFNKQQGS*EFLGRSLAGRGHRG Trigger: ACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTTTATTAAACAGCTCAGTAAAGAAAGCACAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 90 bp | TCTGAGATCAGCCTGGGCGACATGTGGAAATCCTGTCTATATTCCTaGTGGAGATTGCCTGTCTTTGGAGCCTGGAAGTCTCTGGTTCCC | + |
Preference number: 5 (lower is better) Translates to: SEISLGDMWKSCLYS*WRLPVFGAWKSLVP Trigger: GGGAACCAGAGACTTCCAGGCTCCAAAGACAGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS TCA 90 bp | GTGTTTGAGAGCCGGGAGAACTGGGCTGGAGGATCTGTCAGGTCCTaGCCAGTTCTAAAAGTCCAGATCCAAGCGTACAAACAATTCCTC | + |
Preference number: 5 (lower is better) Translates to: VFESRENWAGGSVRS*PVLKVQIQAYKQFL Trigger: GAGGAATTGTTTGTACGCTTGGATCTGGACTTTTAGAACTGGTCAGGACCTGACAGATCCTCCAGCCCAGTTCTCCCGGCTCTCAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000643204.1 ENST00000644731.1 ENST00000646289.1 |
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CDS TCA 90 bp | TGGACCTTAAGTCCAAGGAACAAAAAGCTAAGGAAGACAGAGCACTaGGCTAGCAGGAGTCTGGGTTCCTGCCCAGCAATGGCAGACTCA | + |
Preference number: 5 (lower is better) Translates to: WTLSPRNKKLRKTEH*ASRSLGSCPAMADS Trigger: TGAGTCTGCCATTGCTGGGCAGGAACCCAGACTCCTGCTAGCTCAGTGCTCTGTCTTCCTTAGCTTTTTGTTCCTTGGACTTAAGGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CCA 90 bp | GAACAGACGCTCTCCCTGCGATTTCAGCCTGCCGGATCATCTTGGTaGAAGTTCATAAATGCGTCTGAAATGCTCCCAGCCTTTCAGTCT | + |
Preference number: 5 (lower is better) Translates to: EQTLSLRFQPAGSSW*KFINASEMLPAFQS Trigger: AGACTGAAAGGCTGGGAGCATTTCAGACGCATTTATGAACTTCCACCAAGATGATCCGGCAGGCTGAAATCGCAGGGAGAGCGTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000426922.6 ENST00000621861.1 ENST00000655545.1 ENST00000660375.1 ENST00000665621.1 |
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CDS CCA 90 bp | GTTGAACAGACGCTCTCCCTGCGATTTCAGCCTGCCGGATCATCTTaGTGGAAGTTCATAAATGCGTCTGAAATGCTCCCAGCCTTTCAG | + |
Preference number: 5 (lower is better) Translates to: VEQTLSLRFQPAGSS*WKFINASEMLPAFQ Trigger: CTGAAAGGCTGGGAGCATTTCAGACGCATTTATGAACTTCCACCAAGATGATCCGGCAGGCTGAAATCGCAGGGAGAGCGTCTGTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000426922.6 ENST00000621861.1 ENST00000655545.1 ENST00000660375.1 ENST00000665621.1 |
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CDS CCA 90 bp | TGGGAAGATCCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATATTCCTGGTGGAGATTGCCTGTCTTTGGA | + |
Preference number: 5 (lower is better) Translates to: WEDPGQESEISLGDM*KSCLYSWWRLPVFG Trigger: TCCAAAGACAGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS GCA 90 bp | ATCGCTGTTTCATGTCCGCTCGGACCGCCCATTCTGTTTCATTATTaGTCTTTCAGCCACCTCCAGGCCGAACACTCAGACAAAATCACT | + |
Preference number: 5 (lower is better) Translates to: IAVSCPLGPPILFHY*SFSHLQAEHSDKIT Trigger: AGTGATTTTGTCTGAGTGTTCGGCCTGGAGGTGGCTGAAAGAGCAATAATGAAACAGAATGGGCGGTCCGAGCGGACATGAAACAGCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 90 bp | TGGGAAGATCCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATACTTTAACCTAGCAGGCCAATCAAGGTCT | + |
Preference number: 5 (lower is better) Translates to: WEDPGQESEISLGDM*KSCLYFNLAGQSRS Trigger: AGACCTTGATTGGCCTGCTAGGTTAAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426922.6 |
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CDS GCA 90 bp | CCCAATAAACATTTTAAGAATGTTTGGTGCAAGCCAGGGGTGAGTTaGGCCAGAGGTCTCATATCCAGAGGTCTGAGAACCAGGAGAGTC | + |
Preference number: 5 (lower is better) Translates to: PNKHFKNVWCKPGVS*ARGLISRGLRTRRV Trigger: GACTCTCCTGGTTCTCAGACCTCTGGATATGAGACCTCTGGCGCAACTCACCCCTGGCTTGCACCAAACATTCTTAAAATGTTTATTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000426922.6 ENST00000616194.4 ENST00000621861.1 |
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CDS GCA 90 bp | TGCCAGTTCATGCTTCACTTAGTCTTCTGGTTCACTGTAATTCTCTaGCAGGTTTCAAGGTGCTCTCCTTGGCTAAAGCCAGACCTCAGC | + |
Preference number: 5 (lower is better) Translates to: CQFMLHLVFWFTVIL*QVSRCSPWLKPDLS Trigger: GCTGAGGTCTGGCTTTAGCCAAGGAGAGCACCTTGAAACCTGGCAGAGAATTACAGTGAACCAGAAGACTAAGTGAAGCATGAACTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS CCA 90 bp | TGTTGTATCAGGGCCCTAAAGTGGTTGGATGATGGCCATCTACACTaGGGAAGGCAAATCTTCCTCACTCAGTCTCCTGATTCAAATGCT | + |
Preference number: 5 (lower is better) Translates to: CCIRALKWLDDGHLH*GRQIFLTQSPDSNA Trigger: AGCATTTGAATCAGGAGACTGAGTGAGGAAGATTTGCCTTCCCCAGTGTAGATGGCCATCATCCAACCACTTTAGGGCCCTGATACAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611112.4 |
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CDS CCA 90 bp | CTGGGCGACATGTGGAAATCCTGTCTATACTTGTCCCAGCTCTTCTaGACACAGCCAACACCAGCTATTCCAGCTAGATTCATGATTTCA | + |
Preference number: 5 (lower is better) Translates to: LGDMWKSCLYLSQLF*TQPTPAIPARFMIS Trigger: TGAAATCATGAATCTAGCTGGAATAGCTGGTGTTGGCTGTGTCCAGAAGAGCTGGGACAAGTATAGACAGGATTTCCACATGTCGCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS TCA 90 bp | CACTTTCTTCTTCCTTTCCTCTTTCAGTCGGATGCAATTTTAGTGTaGTGGCTGGAACCTCAGCAGCCATCTTGGACCTTAAGTCCAAGG | + |
Preference number: 5 (lower is better) Translates to: HFLLPFLFQSDAILV*WLEPQQPSWTLSPR Trigger: CCTTGGACTTAAGGTCCAAGATGGCTGCTGAGGTTCCAGCCATCACACTAAAATTGCATCCGACTGAAAGAGGAAAGGAAGAAGAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS TCA 90 bp | CAAGCAGATACGTTGAAAAGTACCTTCAGGAAGTCTCCAAAAAGGTaGGCCAGGGCACTTTCTTCTTCCTTTCCTCTTTCAGTCGGATGC | + |
Preference number: 5 (lower is better) Translates to: QADTLKSTFRKSPKR*ARALSSSFPLSVGC Trigger: GCATCCGACTGAAAGAGGAAAGGAAGAAGAAAGTGCCCTGGCTCACCTTTTTGGAGACTTCCTGAAGGTACTTTTCAACGTATCTGCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS TCA 90 bp | GATTCCTTGAAAGGTGGCTTGAAACTCATCTCTCAATTGAAGTCATaGATCTGTAGTCCTAGCTACTTGGTGAGGCTGAGGCCAGAGGAT | + |
Preference number: 5 (lower is better) Translates to: DSLKGGLKLISQLKS*ICSPSYLVRLRPED Trigger: ATCCTCTGGCCTCAGCCTCACCAAGTAGCTAGGACTACAGATTCATGACTTCAATTGAGAGATGAGTTTCAAGCCACCTTTCAAGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS TCA 90 bp | TGTTCTGTGATCGAGTGCTGGCAAATGAAATACAAGCAGATACGTTaGAAAGTACCTTCAGGAAGTCTCCAAAAAGGTGAGCCAGGGCAC | + |
Preference number: 5 (lower is better) Translates to: CSVIECWQMKYKQIR*KVPSGSLQKGEPGH Trigger: GTGCCCTGGCTCACCTTTTTGGAGACTTCCTGAAGGTACTTTTCAACGTATCTGCTTGTATTTCATTTGCCAGCACTCGATCACAGAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CCA 90 bp | GTAAATGTTTATTTGAACCAGAGGTGGCCAGTCTTTTGGCTTCCCTaGGCCACATCAGAAGAAGAAGAATTGTCTTGGGCCACACGTAAA | + |
Preference number: 5 (lower is better) Translates to: VNVYLNQRWPVFWLP*ATSEEEELSWATRK Trigger: TTTACGTGTGGCCCAAGACAATTCTTCTTCTTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CCA 90 bp | AGCCAGGAAAGCATATTATGCCAGTTCATGCTTCACTTAGTCTTCTaGTTCACTGTAATTCTCTGCCAGGTTTCAAGGTGCTCTCCTTGG | + |
Preference number: 5 (lower is better) Translates to: SQESILCQFMLHLVF*FTVILCQVSRCSPW Trigger: CCAAGGAGAGCACCTTGAAACCTGGCAGAGAATTACAGTGAACCAGAAGACTAAGTGAAGCATGAACTGGCATAATATGCTTTCCTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS CCA 90 bp | CTAATATATGTGACTGAGGCTGTAAATGTTTATTTGAACCAGAGGTaGCCAGTCTTTTGGCTTCCCTGGGCCACATCAGAAGAAGAAGAA | + |
Preference number: 5 (lower is better) Translates to: LIYVTEAVNVYLNQR*PVFWLPWATSEEEE Trigger: TTCTTCTTCTTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTACAGCCTCAGTCACATATATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS TCA 90 bp | CCAGTGAACAAGGTGAAAACTGTGTCACTTTTTCCAACTGAGTCGTaGAAGTCATGCAGTATTCTATTGGCGTCATTGAGTTCCAATCGT | + |
Preference number: 5 (lower is better) Translates to: PVNKVKTVSLFPTES*KSCSILLASLSSNR Trigger: ACGATTGGAACTCAATGACGCCAATAGAATACTGCATGACTTTCACGACTCAGTTGGAAAAAGTGACACAGTTTTCACCTTGTTCACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS TCA 90 bp | ACGTGGAATCCTTCTGGAATGTTCCCAGTTCAACATCACTGCAAGTaGGCTAATATATGCTCTTGGGTAATAACATTCTCTCGTTATTTT | + |
Preference number: 5 (lower is better) Translates to: TWNPSGMFPVQHHCK*ANICSWVITFSRYF Trigger: AAAATAACGAGAGAATGTTATTACCCAAGAGCATATATTAGCTCACTTGCAGTGATGTTGAACTGGGAACATTCCAGAAGGATTCCACGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS TCA 90 bp | GATTTTGGAACCAAGTTGCAGGTTATTATAGTACAAAATTCCAGTTaGCATTTAGCAAGCTTAACCCAAATAAAGATGACAGTTCAGGCT | + |
Preference number: 5 (lower is better) Translates to: DFGTKLQVIIVQNSS*HLASLTQIKMTVQA Trigger: AGCCTGAACTGTCATCTTTATTTGGGTTAAGCTTGCTAAATGTCAACTGGAATTTTGTACTATAATAACCTGCAACTTGGTTCCAAAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653558.1 ENST00000659813.1 |
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CDS TCA 72 bp | GCAGGGAGAGGGCACCGTGGTGCCGACTTTCCAGGCTaGCTCGCCGTTGCATTTGCAAACCTGGGGCTCCCC | + |
Preference number: 6 (lower is better) Translates to: AGRGHRGADFPG*LAVAFANLGLP Trigger: GGGGAGCCCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 72 bp | GGCACCGTGGTGCCGACTTTCCAGGCTGACTCGCCGTaGCATTTGCAAACCTGGGGCTCCCCAGCCATCCCC | + |
Preference number: 6 (lower is better) Translates to: GTVVPTFQADSP*HLQTWGSPAIP Trigger: GGGGATGGCTGGGGAGCCCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS GCA 72 bp | TCTTGGAAGGAGCCTGGCAGGGAGAGGGCACCGTGGTaGCGACTTTCCAGGCTGACTCGCCGTTGCATTTGC | + |
Preference number: 6 (lower is better) Translates to: SWKEPGRERAPW*RLSRLTRRCIC Trigger: GCAAATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS TCA 72 bp | GCACTCCCAGGGAATGAGCCATCCAAGCCGCAATCCTaGGCCCAAGAAAAGCACCACCGAGCCTCCGCAGGA | + |
Preference number: 6 (lower is better) Translates to: ALPGNEPSKPQS*AQEKHHRASAG Trigger: TCCTGCGGAGGCTCGGTGGTGCTTTTCTTGGGCTCAGGATTGCGGCTTGGATGGCTCATTCCCTGGGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS GCA 72 bp | AGAGCTCTGAGGCCCCTTGCCATCCACTGTCCTCACTaGCTGCTAGGTCTCTCCCAGATCCTCAGGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: RALRPLAIHCPH*LLGLSQILRQL Trigger: CAGCTGCCTGAGGATCTGGGAGAGACCTAGCAGGCAGTGAGGACAGTGGATGGCAAGGGGCCTCAGAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS TCA 72 bp | CCTGGCCAAATTGTCTTCAGTCCCAGAGGCAAGCGGTaGGCCCACATGGGTGATGCCCTTGCAGAGCCAGGA | + |
Preference number: 6 (lower is better) Translates to: PGQIVFSPRGKR*AHMGDALAEPG Trigger: TCCTGGCTCTGCAAGGGCATCACCCATGTGGGCTCACCGCTTGCCTCTGGGACTGAAGACAATTTGGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS CCA 72 bp | ATTTCTTGGAAGGAGCCTGGCAGGGAGAGGGCACCGTaGTGCCGACTTTCCAGGCTGACTCGCCGTTGCATT | + |
Preference number: 6 (lower is better) Translates to: ISWKEPGRERAP*CRLSRLTRRCI Trigger: AATGCAACGGCGAGTCAGCCTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 72 bp | AACAGCAGGGTAGCTGGGAATTTCTTGGAAGGAGCCTaGCAGGGAGAGGGCACCGTGGTGCCGACTTTCCAG | + |
Preference number: 6 (lower is better) Translates to: NSRVAGNFLEGA*QGEGTVVPTFQ Trigger: CTGGAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 72 bp | CTGGTCAACAGAGTGAGACCATGCGCCATCTCCACGTaGTCTGGACTTCGTCACAAGATGGCCGGCTCAGGG | + |
Preference number: 6 (lower is better) Translates to: LVNRVRPCAIST*SGLRHKMAGSG Trigger: CCCTGAGCCGGCCATCTTGTGACGAAGTCCAGACCACGTGGAGATGGCGCATGGTCTCACTCTGTTGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS CCA 72 bp | CTCCAGCCTGGGCGACAGAAAGAGGCCCATCTCATGTaGCAGACGCGAGCTCAGTGCTGTACATTCGCATTC | + |
Preference number: 6 (lower is better) Translates to: LQPGRQKEAHLM*QTRAQCCTFAF Trigger: GAATGCGAATGTACAGCACTGAGCTCGCGTCTGCCACATGAGATGGGCCTCTTTCTGTCGCCCAGGCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375520.4 |
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CDS CCA 72 bp | ACTTTCCAGGCTGACTCGCCGTTGCATTTGCAAACCTaGGGCTCCCCAGCCATCCCCACAGAGCTGCTGAAT | + |
Preference number: 6 (lower is better) Translates to: TFQADSPLHLQT*GSPAIPTELLN Trigger: ATTCAGCAGCTCTGTGGGGATGGCTGGGGAGCCCCAGGTTTGCAAATGCAACGGCGAGTCAGCCTGGAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 72 bp | GGCTCCCCAGCCATCCCCACAGAGCTGCTGAATAGGTaGCTAAGGGCTTGGCAATGTTCTGCACAGCCACTG | + |
Preference number: 6 (lower is better) Translates to: GSPAIPTELLNR*LRAWQCSAQPL Trigger: CAGTGGCTGTGCAGAACATTGCCAAGCCCTTAGCAACCTATTCAGCAGCTCTGTGGGGATGGCTGGGGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 90 bp | CTGTCTAAGGCATGGGAGAAAGGGGCCGGTCTCACACCTGCTTCTTaGTGTCAGATTTCCCTTCGAGGACTCTGGACTCCGAGGACCTCT | + |
Preference number: 6 (lower is better) Translates to: LSKAWEKGAGLTPAS*CQISLRGLWTPRTS Trigger: AGAGGTCCTCGGAGTCCAGAGTCCTCGAAGGGAAATCTGACACAAAGAAGCAGGTGTGAGACCGGCCCCTTTCTCCCATGCCTTAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000644731.1 ENST00000646289.1 |
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CDS TCA 72 bp | TCAGTGGCTGAGGTGGGAAGATCCAGGTCAGGAGTCTaGGATCAGCCTGGGCGACATGTGGAAATCCTGTCT | + |
Preference number: 6 (lower is better) Translates to: SVAEVGRSRSGV*DQPGRHVEILS Trigger: AGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000426922.6 ENST00000621861.1 ENST00000643204.1 ENST00000644731.1 ENST00000647111.1 ENST00000655545.1 ENST00000660375.1 ENST00000665621.1 |
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CDS TCA 72 bp | TGCCCACTGTCCTGTAATCCCAGCACGTTCAGTGGCTaGGGTGGGAAGATCCAGGTCAGGAGTCTGAGATCA | + |
Preference number: 6 (lower is better) Translates to: CPLSCNPSTFSG*GGKIQVRSLRS Trigger: TGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGGGATTACAGGACAGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS CCA 72 bp | CCTGCTTCTTTGTGTCAGATTTCCCTTCGAGGACTCTaGACTCCGAGGACCTCTAAGAGGGAGGCACAGCTG | + |
Preference number: 6 (lower is better) Translates to: PASLCQISLRGL*TPRTSKREAQL Trigger: CAGCTGTGCCTCCCTCTTAGAGGTCCTCGGAGTCCAGAGTCCTCGAAGGGAAATCTGACACAAAGAAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000644731.1 ENST00000646289.1 |
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CDS TCA 72 bp | CTTTCCAAAGGGCTCAGTGTGTGCACTCCCAGGGAATaGGCCATCCAAGCCGCAATCCTGAGCCCAAGAAAA | + |
Preference number: 6 (lower is better) Translates to: LSKGLSVCTPRE*AIQAAILSPRK Trigger: TTTTCTTGGGCTCAGGATTGCGGCTTGGATGGCTCATTCCCTGGGAGTGCACACACTGAGCCCTTTGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS TCA 72 bp | CTGGACATCCTCTGTAATCCCAGCACGTTCAGTGGCTaGGGTGGGAAGATCCAGGTCAGGAGTCTGAGATCA | + |
Preference number: 6 (lower is better) Translates to: LDILCNPSTFSG*GGKIQVRSLRS Trigger: TGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGGGATTACAGAGGATGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS GCA 72 bp | TCATGTCCGCTCGGACCGCCCATTCTGTTTCATTATTaGTCTTTCAGCCACCTCCAGGCCGAACACTCAGAC | + |
Preference number: 6 (lower is better) Translates to: SCPLGPPILFHY*SFSHLQAEHSD Trigger: GTCTGAGTGTTCGGCCTGGAGGTGGCTGAAAGAGCAATAATGAAACAGAATGGGCGGTCCGAGCGGACATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS GCA 72 bp | GGACTTCGTCACAAGATGGCCGGCTCAGGGTCCTGTTaGAGGTATCCCAGTGAACAAGGTGAAAACTGTGTC | + |
Preference number: 6 (lower is better) Translates to: GLRHKMAGSGSC*RYPSEQGENCV Trigger: GACACAGTTTTCACCTTGTTCACTGGGATACCTGCAACAGGACCCTGAGCCGGCCATCTTGTGACGAAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS CCA 72 bp | CCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATACTTGTCCCAGCTCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: PGQESEISLGDM*KSCLYLSQLFW Trigger: CCAGAAGAGCTGGGACAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS CAA 72 bp | AGCTGTTTAATAAACAGCAGGGTAGCTGGGAATTTCTaGGAAGGAGCCTGGCAGGGAGAGGGCACCGTGGTG | + |
Preference number: 6 (lower is better) Translates to: SCLINSRVAGNF*EGAWQGEGTVV Trigger: CACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTTTATTAAACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 90 bp | GAGGGAGGCACAGCTGATAACCACTATGCACTGTGGAAGCCACCTTaGTGGTCCCACAGGAAAATTATGAGGTCACAGAGCTCTGAGGCC | + |
Preference number: 6 (lower is better) Translates to: EGGTADNHYALWKPP*WSHRKIMRSQSSEA Trigger: GGCCTCAGAGCTCTGTGACCTCATAATTTTCCTGTGGGACCACAAAGGTGGCTTCCACAGTGCATAGTGGTTATCAGCTGTGCCTCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS TCA 72 bp | CAGACCTTCAACTGTAATCCCAGCACGTTCAGTGGCTaGGGTGGGAAGATCCAGGTCAGGAGTCTGAGATCA | + |
Preference number: 6 (lower is better) Translates to: QTFNCNPSTFSG*GGKIQVRSLRS Trigger: TGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGGGATTACAGTTGAAGGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426922.6 ENST00000621861.1 ENST00000660375.1 |
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CDS CCA 72 bp | CTCTCCCTGCGATTTCAGCCTGCCGGATCATCTTGGTaGAAGTTCATAAATGCGTCTGAAATGCTCCCAGCC | + |
Preference number: 6 (lower is better) Translates to: LSLRFQPAGSSW*KFINASEMLPA Trigger: GGCTGGGAGCATTTCAGACGCATTTATGAACTTCCACCAAGATGATCCGGCAGGCTGAAATCGCAGGGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000426922.6 ENST00000621861.1 ENST00000655545.1 ENST00000660375.1 ENST00000665621.1 |
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CDS CCA 72 bp | GAGGAGAATGGGGCTCAGAGGGTGCTGGAGCAAGTCTaGAGTCTGAAGGCCAGAAAATCTAGAGTTCTGATG | + |
Preference number: 6 (lower is better) Translates to: EENGAQRVLEQV*SLKARKSRVLM Trigger: CATCAGAACTCTAGATTTTCTGGCCTTCAGACTCCAGACTTGCTCCAGCACCCTCTGAGCCCCATTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000611112.4 ENST00000621861.1 |
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CDS CCA 72 bp | CCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATATTCCTGGTGGAGATTGCCT | + |
Preference number: 6 (lower is better) Translates to: PGQESEISLGDM*KSCLYSWWRLP Trigger: AGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CCA 72 bp | GGTGGGAAGATCCAGGTCAGGAGTCTGAGATCAGCCTaGGCGACATGTGGAAATCCTGTCTATATTCCTGGT | + |
Preference number: 6 (lower is better) Translates to: GGKIQVRSLRSA*ATCGNPVYIPG Trigger: ACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CAA 72 bp | TTCATGTCCGCTCGGACCGCCCATTCTGTTTCATTATaGCTCTTTCAGCCACCTCCAGGCCGAACACTCAGA | + |
Preference number: 6 (lower is better) Translates to: FMSARTAHSVSL*LFQPPPGRTLR Trigger: TCTGAGTGTTCGGCCTGGAGGTGGCTGAAAGAGCAATAATGAAACAGAATGGGCGGTCCGAGCGGACATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 90 bp | TCTTTACTGAGCTGTTTAATAAACAGCAGGGTAGCTGGGAATTTCTaGGAAGGAGCCTGGCAGGGAGAGGGCACCGTGGTGCCGACTTTC | + |
Preference number: 6 (lower is better) Translates to: SLLSCLINSRVAGNF*EGAWQGEGTVVPTF Trigger: GAAAGTCGGCACCACGGTGCCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTTTATTAAACAGCTCAGTAAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 90 bp | AGCCTGGGCGACATGTGGAAATCCTGTCTATATTCCTGGTGGAGATaGCCTGTCTTTGGAGCCTGGAAGTCTCTGGTTCCCGGTGGATTT | + |
Preference number: 6 (lower is better) Translates to: SLGDMWKSCLYSWWR*PVFGAWKSLVPGGF Trigger: AAATCCACCGGGAACCAGAGACTTCCAGGCTCCAAAGACAGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CAA 90 bp | GAGTCTGAGATCAGCCTGGGCGACATGTGGAAATCCTGTCTATACTaGTCCCAGCTCTTCTGGACACAGCCAACACCAGCTATTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: ESEISLGDMWKSCLY*SQLFWTQPTPAIPA Trigger: AGCTGGAATAGCTGGTGTTGGCTGTGTCCAGAAGAGCTGGGACAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS CAA 90 bp | TCTAGGCTTACCTCTGTCTTTATGGGCTTCTGTCTTTTGCTTCTCTaGAGGCCCTCCCAGGAGGTAGGATCAAACATGCCCACTGTCCTG | + |
Preference number: 6 (lower is better) Translates to: SRLTSVFMGFCLLLL*RPSQEVGSNMPTVL Trigger: CAGGACAGTGGGCATGTTTGATCCTACCTCCTGGGAGGGCCTCAAGAGAAGCAAAAGACAGAAGCCCATAAAGACAGAGGTAAGCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS TCA 72 bp | GCCTGGGCTTTAGGGTTCTCCTCACCCCCTCCAATTTaGAGGTCCAGACTGTACACCATAAAGTCACTGCTT | + |
Preference number: 6 (lower is better) Translates to: AWALGFSSPPPI*RSRLYTIKSLL Trigger: AAGCAGTGACTTTATGGTGTACAGTCTGGACCTTCAAATTGGAGGGGGTGAGGAGAACCCTAAAGCCCAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603866.1 |
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CDS TCA 72 bp | AGTCCAAGGAACAAAAAGCTAAGGAAGACAGAGCACTaGGCTAGCAGGAGTCTGGGTTCCTGCCCAGCAATG | + |
Preference number: 6 (lower is better) Translates to: SPRNKKLRKTEH*ASRSLGSCPAM Trigger: CATTGCTGGGCAGGAACCCAGACTCCTGCTAGCTCAGTGCTCTGTCTTCCTTAGCTTTTTGTTCCTTGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CCA 72 bp | GGTGGGAAGATCCAGGTCAGGAGTCTGAGATCAGCCTaGGCGACATGTGGAAATCCTGTCTATACTTTAACC | + |
Preference number: 6 (lower is better) Translates to: GGKIQVRSLRSA*ATCGNPVYTLT Trigger: GGTTAAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGGATCTTCCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426922.6 |
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CDS CCA 72 bp | CCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATACTTGCATGTGATCTCCAAC | + |
Preference number: 6 (lower is better) Translates to: PGQESEISLGDM*KSCLYLHVISN Trigger: GTTGGAGATCACATGCAAGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000647111.1 ENST00000665621.1 |
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CDS CCA 72 bp | AGCCTGGGCGACATGTGGAAATCCTGTCTATATTCCTaGTGGAGATTGCCTGTCTTTGGAGCCTGGAAGTCT | + |
Preference number: 6 (lower is better) Translates to: SLGDMWKSCLYS*WRLPVFGAWKS Trigger: AGACTTCCAGGCTCCAAAGACAGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTCGCCCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CCA 72 bp | CCAGGTCAGGAGTCTGAGATCAGCCTGGGCGACATGTaGAAATCCTGTCTATACAGGAACTGTCCCAGAAAT | + |
Preference number: 6 (lower is better) Translates to: PGQESEISLGDM*KSCLYRNCPRN Trigger: ATTTCTGGGACAGTTCCTGTATAGACAGGATTTCCACATGTCGCCCAGGCTGATCTCAGACTCCTGACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660375.1 |
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CDS CAA 72 bp | TGCCTGGGCTTTAGGGTTCTCCTCACCCCCTCCAATTaGAAGGTCCAGACTGTACACCATAAAGTCACTGCT | + |
Preference number: 6 (lower is better) Translates to: CLGFRVLLTPSN*KVQTVHHKVTA Trigger: AGCAGTGACTTTATGGTGTACAGTCTGGACCTTCAAATTGGAGGGGGTGAGGAGAACCCTAAAGCCCAGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000603866.1 |
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CDS CAA 72 bp | CCTCGGCCTTTTTGTTGTATCAGGGCCCTAAAGTGGTaGGATGATGGCCATCTACACTGGGGAAGGCAAATC | + |
Preference number: 6 (lower is better) Translates to: PRPFCCIRALKW*DDGHLHWGRQI Trigger: GATTTGCCTTCCCCAGTGTAGATGGCCATCATCCAACCACTTTAGGGCCCTGATACAACAAAAAGGCCGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000611112.4 ENST00000621861.1 |
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CDS CAA 90 bp | AATCGCTGTTTCATGTCCGCTCGGACCGCCCATTCTGTTTCATTATaGCTCTTTCAGCCACCTCCAGGCCGAACACTCAGACAAAATCAC | + |
Preference number: 6 (lower is better) Translates to: NRCFMSARTAHSVSL*LFQPPPGRTLRQNH Trigger: GTGATTTTGTCTGAGTGTTCGGCCTGGAGGTGGCTGAAAGAGCAATAATGAAACAGAATGGGCGGTCCGAGCGGACATGAAACAGCGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS TCA 72 bp | ACCTATTTAAGCTGTAATCCCAGCACGTTCAGTGGCTaGGGTGGGAAGATCCAGGTCAGGAGTCTGAGATCA | + |
Preference number: 6 (lower is better) Translates to: TYLSCNPSTFSG*GGKIQVRSLRS Trigger: TGATCTCAGACTCCTGACCTGGATCTTCCCACCTCAGCCACTGAACGTGCTGGGATTACAGCTTAAATAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655545.1 ENST00000665621.1 |
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CDS GCA 72 bp | CATTTTAAGAATGTTTGGTGCAAGCCAGGGGTGAGTTaGGCCAGAGGTCTCATATCCAGAGGTCTGAGAACC | + |
Preference number: 6 (lower is better) Translates to: HFKNVWCKPGVS*ARGLISRGLRT Trigger: GGTTCTCAGACCTCTGGATATGAGACCTCTGGCGCAACTCACCCCTGGCTTGCACCAAACATTCTTAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000426922.6 ENST00000616194.4 ENST00000621861.1 |
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CDS CCA 72 bp | TATTTGAACCAGAGGTGGCCAGTCTTTTGGCTTCCCTaGGCCACATCAGAAGAAGAAGAATTGTCTTGGGCC | + |
Preference number: 6 (lower is better) Translates to: YLNQRWPVFWLP*ATSEEEELSWA Trigger: GGCCCAAGACAATTCTTCTTCTTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CCA 72 bp | ATCCCCACAGAGCTGCTGAATAGGTTGCTAAGGGCTTaGCAATGTTCTGCACAGCCACTGCTGATACTAAAG | + |
Preference number: 6 (lower is better) Translates to: IPTELLNRLLRA*QCSAQPLLILK Trigger: CTTTAGTATCAGCAGTGGCTGTGCAGAACATTGCCAAGCCCTTAGCAACCTATTCAGCAGCTCTGTGGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 72 bp | AAGATGGATGTTCCAGCTGCAGAAGAGAGAGCAAATTaGCCCTTCCTCGGCCTTTTTGTTGTATCAGGGCCC | + |
Preference number: 6 (lower is better) Translates to: KMDVPAAEERAN*PFLGLFVVSGP Trigger: GGGCCCTGATACAACAAAAAGGCCGAGGAAGGGCAAATTTGCTCTCTCTTCTGCAGCTGGAACATCCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000611112.4 ENST00000621861.1 |
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CDS CAA 72 bp | CAATCGTACAATTCTAGGCTTACTTCCTGGTGGAGATaGCCTGTCTTTGGAGCCTGGAAGTCTCTGGTTCCC | + |
Preference number: 6 (lower is better) Translates to: QSYNSRLTSWWR*PVFGAWKSLVP Trigger: GGGAACCAGAGACTTCCAGGCTCCAAAGACAGGCAATCTCCACCAGGAAGTAAGCCTAGAATTGTACGATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CAA 72 bp | GACATGTGGAAATCCTGTCTATATTCCTGGTGGAGATaGCCTGTCTTTGGAGCCTGGAAGTCTCTGGTTCCC | + |
Preference number: 6 (lower is better) Translates to: DMWKSCLYSWWR*PVFGAWKSLVP Trigger: GGGAACCAGAGACTTCCAGGCTCCAAAGACAGGCAATCTCCACCAGGAATATAGACAGGATTTCCACATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CAA 90 bp | TCGTACAATTCTAGGCTTACCTCTGTCTTTATGGGCTTCTGTCTTTaGCTTCTCTTGAGGCCCTCCCAGGAGGTAGGATCAAACATGCCC | + |
Preference number: 6 (lower is better) Translates to: SYNSRLTSVFMGFCL*LLLRPSQEVGSNMP Trigger: GGGCATGTTTGATCCTACCTCCTGGGAGGGCCTCAAGAGAAGCAAAAGACAGAAGCCCATAAAGACAGAGGTAAGCCTAGAATTGTACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS TCA 72 bp | GCCTTTTTGTTGTATCAGGGCCCTAAAGTGGTTGGATaGTGGCCATCTACACTGGGGAAGGCAAATCTTCCT | + |
Preference number: 6 (lower is better) Translates to: AFLLYQGPKVVG*WPSTLGKANLP Trigger: AGGAAGATTTGCCTTCCCCAGTGTAGATGGCCATCATCCAACCACTTTAGGGCCCTGATACAACAAAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000611112.4 ENST00000621861.1 |
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CDS GCA 72 bp | AGGGCACTTTCTTCTTCCTTTCCTCTTTCAGTCGGATaGAATTTTAGTGTGATGGCTGGAACCTCAGCAGCC | + |
Preference number: 6 (lower is better) Translates to: RALSSSFPLSVG*NFSVMAGTSAA Trigger: GGCTGCTGAGGTTCCAGCCATCACACTAAAATTGCATCCGACTGAAAGAGGAAAGGAAGAAGAAAGTGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CCA 72 bp | GTGACTGAGGCTGTAAATGTTTATTTGAACCAGAGGTaGCCAGTCTTTTGGCTTCCCTGGGCCACATCAGAA | + |
Preference number: 6 (lower is better) Translates to: VTEAVNVYLNQR*PVFWLPWATSE Trigger: TTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTACAGCCTCAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CCA 72 bp | TTCTTTACTGAGCTGTTTAATAAACAGCAGGGTAGCTaGGAATTTCTTGGAAGGAGCCTGGCAGGGAGAGGG | + |
Preference number: 6 (lower is better) Translates to: FFTELFNKQQGS*EFLGRSLAGRG Trigger: CCCTCTCCCTGCCAGGCTCCTTCCAAGAAATTCCCAGCTACCCTGCTGTTTATTAAACAGCTCAGTAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CCA 72 bp | GCTGATAACCACTATGCACTGTGGAAGCCACCTTTGTaGTCCCACAGGAAAATTATGAGGTCACAGAGCTCT | + |
Preference number: 6 (lower is better) Translates to: ADNHYALWKPPL*SHRKIMRSQSS Trigger: AGAGCTCTGTGACCTCATAATTTTCCTGTGGGACCACAAAGGTGGCTTCCACAGTGCATAGTGGTTATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CCA 72 bp | CTGATTATTTCCCTTTTTCCATTGCTGGTCACTTCCTaGCCAAATTGTCTTCAGTCCCAGAGGCAAGCGGTG | + |
Preference number: 6 (lower is better) Translates to: LIISLFPLLVTS*PNCLQSQRQAV Trigger: CACCGCTTGCCTCTGGGACTGAAGACAATTTGGCCAGGAAGTGACCAGCAATGGAAAAAGGGAAATAATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655545.1 |
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CDS CAA 72 bp | ACAGCTGATAACCACTATGCACTGTGGAAGCCACCTTaGTGGTCCCACAGGAAAATTATGAGGTCACAGAGC | + |
Preference number: 6 (lower is better) Translates to: TADNHYALWKPP*WSHRKIMRSQS Trigger: GCTCTGTGACCTCATAATTTTCCTGTGGGACCACAAAGGTGGCTTCCACAGTGCATAGTGGTTATCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS CAA 90 bp | TATTTCCAACAACACAACTGTTTCCTCCCCACTGCTAGAGGTAAATaGTCAGGCAGCCTAGCAACGTGGCCAGCTGAATCACAGCATTCT | + |
Preference number: 6 (lower is better) Translates to: YFQQHNCFLPTARGK*SGSLATWPAESQHS Trigger: AGAATGCTGTGATTCAGCTGGCCACGTTGCTAGGCTGCCTGACAATTTACCTCTAGCAGTGGGGAGGAAACAGTTGTGTTGTTGGAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CAA 90 bp | CTCTGGCAACTTGTGAATGCCTTCTGCTCATGTAGGATGGCTGTTTaGCCCCCTGTGCTTTCTTTACTGAGCTGTTTAATAAACAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LWQLVNAFCSCRMAV*PPVLSLLSCLINSR Trigger: CCTGCTGTTTATTAAACAGCTCAGTAAAGAAAGCACAGGGGGCAAAACAGCCATCCTACATGAGCAGAAGGCATTCACAAGTTGCCAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645413.1 |
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CDS CAA 90 bp | GTCGGATGCAATTTTAGTGTGATGGCTGGAACCTCAGCAGCCATCTaGGACCTTAAGTCCAAGGAACAAAAAGCTAAGGAAGACAGAGCA | + |
Preference number: 6 (lower is better) Translates to: VGCNFSVMAGTSAAI*DLKSKEQKAKEDRA Trigger: TGCTCTGTCTTCCTTAGCTTTTTGTTCCTTGGACTTAAGGTCCAAGATGGCTGCTGAGGTTCCAGCCATCACACTAAAATTGCATCCGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS TCA 72 bp | CTTCCTTTCCTCTTTCAGTCGGATGCAATTTTAGTGTaGTGGCTGGAACCTCAGCAGCCATCTTGGACCTTA | + |
Preference number: 6 (lower is better) Translates to: LPFLFQSDAILV*WLEPQQPSWTL Trigger: TAAGGTCCAAGATGGCTGCTGAGGTTCCAGCCATCACACTAAAATTGCATCCGACTGAAAGAGGAAAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS CCA 72 bp | ACTGAGCTAGCAGGAGTCTGGGTTCCTGCCCAGCAATaGCAGACTCACTTCCAGAATTATTTTCATTCACAT | + |
Preference number: 6 (lower is better) Translates to: TELAGVWVPAQQ*QTHFQNYFHSH Trigger: ATGTGAATGAAAATAATTCTGGAAGTGAGTCTGCCATTGCTGGGCAGGAACCCAGACTCCTGCTAGCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS GCA 72 bp | ATGCTTCACTTAGTCTTCTGGTTCACTGTAATTCTCTaGCAGGTTTCAAGGTGCTCTCCTTGGCTAAAGCCA | + |
Preference number: 6 (lower is better) Translates to: MLHLVFWFTVIL*QVSRCSPWLKP Trigger: TGGCTTTAGCCAAGGAGAGCACCTTGAAACCTGGCAGAGAATTACAGTGAACCAGAAGACTAAGTGAAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS CAA 90 bp | ATATCAGGAGAGTATCCTGACTCCAAAGTCCATGCTCATAAACACTaGGTTCTACTCCTTCCAAGCATGACAGCAAATGACTTTGCCCAC | + |
Preference number: 6 (lower is better) Translates to: ISGEYPDSKVHAHKH*VLLLPSMTANDFAH Trigger: GTGGGCAAAGTCATTTGCTGTCATGCTTGGAAGGAGTAGAACCAAGTGTTTATGAGCATGGACTTTGGAGTCAGGATACTCTCCTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643204.1 ENST00000644731.1 ENST00000646289.1 |
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CDS TCA 72 bp | GGGCGACATGTGGAAATCCTGTCTATACAATTAGAATaGGACGGCAAGGGATGTGTAGCTTTTTCAATCCTG | + |
Preference number: 6 (lower is better) Translates to: GRHVEILSIQLE*DGKGCVAFSIL Trigger: CAGGATTGAAAAAGCTACACATCCCTTGCCGTCTCATTCTAATTGTATAGACAGGATTTCCACATGTCGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000621861.1 |
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CDS TCA 72 bp | AAAGGTGGCTTGAAACTCATCTCTCAATTGAAGTCATaGATCTGTAGTCCTAGCTACTTGGTGAGGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: KGGLKLISQLKS*ICSPSYLVRLR Trigger: CCTCAGCCTCACCAAGTAGCTAGGACTACAGATTCATGACTTCAATTGAGAGATGAGTTTCAAGCCACCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643204.1 ENST00000644731.1 |
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CDS CCA 72 bp | ATACAAATGCAAACACTGCTTCACGTGGAATCCTTCTaGAATGTTCCCAGTTCAACATCACTGCAAGTGAGC | + |
Preference number: 6 (lower is better) Translates to: IQMQTLLHVESF*NVPSSTSLQVS Trigger: GCTCACTTGCAGTGATGTTGAACTGGGAACATTCCAGAAGGATTCCACGTGAAGCAGTGTTTGCATTTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CCA 72 bp | GTAAATGTTTATTTGAACCAGAGGTGGCCAGTCTTTTaGCTTCCCTGGGCCACATCAGAAGAAGAAGAATTG | + |
Preference number: 6 (lower is better) Translates to: VNVYLNQRWPVF*LPWATSEEEEL Trigger: CAATTCTTCTTCTTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CAA 72 bp | TGGATGAAGAGGCACCAGAACTCCTTGTACATTTCTTaGCAACTTCCTTTGCAACTGTGTGTGATCCTATGC | + |
Preference number: 6 (lower is better) Translates to: WMKRHQNSLYIS*QLPLQLCVILC Trigger: GCATAGGATCACACACAGTTGCAAAGGAAGTTGCAAAGAAATGTACAAGGAGTTCTGGTGCCTCTTCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646289.1 |
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CDS TCA 72 bp | TCACTCAGTCTCCTGATTCAAATGCTAATCTCTTCCTaGAACGCCCGTCTAAGGCTATCAATCAAACTTCAG | + |
Preference number: 6 (lower is better) Translates to: SLSLLIQMLISS*NARLRLSIKLQ Trigger: CTGAAGTTTGATTGATAGCCTTAGACGGGCGTTTCAGGAAGAGATTAGCATTTGAATCAGGAGACTGAGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000611112.4 |
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CDS CCA 72 bp | CTGATTATTTCCCTTTTTCCATTGCTGGTCACTTCCTaGCCAAATTGTCTTGTTGTACAGGCTGGTCTTGAA | + |
Preference number: 6 (lower is better) Translates to: LIISLFPLLVTS*PNCLVVQAGLE Trigger: TTCAAGACCAGCCTGTACAACAAGACAATTTGGCCAGGAAGTGACCAGCAATGGAAAAAGGGAAATAATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000426922.6 ENST00000616194.4 |
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CDS CCA 72 bp | AGCATATTATGCCAGTTCATGCTTCACTTAGTCTTCTaGTTCACTGTAATTCTCTGCCAGGTTTCAAGGTGC | + |
Preference number: 6 (lower is better) Translates to: SILCQFMLHLVF*FTVILCQVSRC Trigger: GCACCTTGAAACCTGGCAGAGAATTACAGTGAACCAGAAGACTAAGTGAAGCATGAACTGGCATAATATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS CAA 72 bp | TGTAAATGTTTATTTGAACCAGAGGTGGCCAGTCTTTaGGCTTCCCTGGGCCACATCAGAAGAAGAAGAATT | + |
Preference number: 6 (lower is better) Translates to: CKCLFEPEVASL*ASLGHIRRRRI Trigger: AATTCTTCTTCTTCTGATGTGGCCCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CAA 72 bp | AATTTTAGTGTGATGGCTGGAACCTCAGCAGCCATCTaGGACCTTAAGTCCAAGGAACAAAAAGCTAAGGAA | + |
Preference number: 6 (lower is better) Translates to: NFSVMAGTSAAI*DLKSKEQKAKE Trigger: TTCCTTAGCTTTTTGTTCCTTGGACTTAAGGTCCAAGATGGCTGCTGAGGTTCCAGCCATCACACTAAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659813.1 |
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CDS TCA 72 bp | AGTGAACAAGGTGAAAACTGTGTCACTTTTTCCAACTaGGTCGTGAAAGTCATGCAGTATTCTATTGGCGTC | + |
Preference number: 6 (lower is better) Translates to: SEQGENCVTFSN*VVKVMQYSIGV Trigger: GACGCCAATAGAATACTGCATGACTTTCACGACTCAGTTGGAAAAAGTGACACAGTTTTCACCTTGTTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS GCA 72 bp | TTTCATGCTTTTTCTTCTCTCGTCCTTGGTCATTCTTaGCAGAGATGGCTTTATCACTCTTTTCAAGGAACC | + |
Preference number: 6 (lower is better) Translates to: FHAFSSLVLGHS*QRWLYHSFQGT Trigger: GGTTCCTTGAAAAGAGTGATAAAGCCATCTCTGGCAAGAATGACCAAGGACGAGAGAAGAAAAAGCATGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CCA 72 bp | CTGATTATTTCCCTTTTTCCATTGCTGGTCACTTCCTaGCCAAATTGTCTGAGTGACGGAATCAATTGTACA | + |
Preference number: 6 (lower is better) Translates to: LIISLFPLLVTS*PNCLSDGINCT Trigger: TGTACAATTGATTCCGTCACTCAGACAATTTGGCCAGGAAGTGACCAGCAATGGAAAAAGGGAAATAATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665621.1 |
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CDS CAA 72 bp | TTTCTAATATATGTGACTGAGGCTGTAAATGTTTATTaGAACCAGAGGTGGCCAGTCTTTTGGCTTCCCTGG | + |
Preference number: 6 (lower is better) Translates to: FLIYVTEAVNVY*NQRWPVFWLPW Trigger: CCAGGGAAGCCAAAAGACTGGCCACCTCTGGTTCAAATAAACATTTACAGCCTCAGTCACATATATTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS TCA 72 bp | AAGGTGAAAACTGTGTCACTTTTTCCAACTGAGTCGTaGAAGTCATGCAGTATTCTATTGGCGTCATTGAGT | + |
Preference number: 6 (lower is better) Translates to: KVKTVSLFPTES*KSCSILLASLS Trigger: ACTCAATGACGCCAATAGAATACTGCATGACTTTCACGACTCAGTTGGAAAAAGTGACACAGTTTTCACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644731.1 |
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CDS CCA 72 bp | TCTCACAATATTTTAAGAAAGTTTACGAATTTGTGTTaGGCCGCATTCAAATATGTCCTAGGCCACATTGTG | + |
Preference number: 6 (lower is better) Translates to: SHNILRKFTNLC*AAFKYVLGHIV Trigger: CACAATGTGGCCTAGGACATATTTGAATGCGGCCCAACACAAATTCGTAAACTTTCTTAAAATATTGTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CAA 72 bp | GTCTCACAATATTTTAAGAAAGTTTACGAATTTGTGTaGGGCCGCATTCAAATATGTCCTAGGCCACATTGT | + |
Preference number: 6 (lower is better) Translates to: VSQYFKKVYEFV*GRIQICPRPHC Trigger: ACAATGTGGCCTAGGACATATTTGAATGCGGCCCAACACAAATTCGTAAACTTTCTTAAAATATTGTGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |
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CDS CAA 90 bp | GTTTCCTTCTGCTTCTATCAATATAAGAATTCTGCGATTCAAGTATaGCTTCAAGAGATGGATCCATCATTCGCTCATTCACTAATTTTC | + |
Preference number: 6 (lower is better) Translates to: VSFCFYQYKNSAIQV*LQEMDPSFAHSLIF Trigger: GAAAATTAGTGAATGAGCGAATGATGGATCCATCTCTTGAAGCAATACTTGAATCGCAGAATTCTTATATTGATAGAAGCAGAAGGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000643204.1 ENST00000644731.1 ENST00000646289.1 |
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CDS CCA 72 bp | AGGAAAATAAGGATCTTCCAAAGATATGAACTATTCTaGGTCATTCATGGTTTTCAGCCAGGAAAGCATATT | + |
Preference number: 6 (lower is better) Translates to: RKIRIFQRYELF*VIHGFQPGKHI Trigger: AATATGCTTTCCTGGCTGAAAACCATGAATGACCCAGAATAGTTCATATCTTTGGAAGATCCTTATTTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000647111.1 ENST00000653558.1 ENST00000659813.1 |
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CDS CCA 72 bp | CTGATTATTTCCCTTTTTCCATTGCTGGTCACTTCCTaGCCAAATTGTCATTCACATCATTTCATGTTATTA | + |
Preference number: 6 (lower is better) Translates to: LIISLFPLLVTS*PNCHSHHFMLL Trigger: TAATAACATGAAATGATGTGAATGACAATTTGGCCAGGAAGTGACCAGCAATGGAAAAAGGGAAATAATCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000647111.1 |
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CDS CAA 72 bp | AAAAAGTCTCACAATATTTTAAGAAAGTTTACGAATTaGTGTTGGGCCGCATTCAAATATGTCCTAGGCCAC | + |
Preference number: 6 (lower is better) Translates to: KKSHNILRKFTN*CWAAFKYVLGH Trigger: GTGGCCTAGGACATATTTGAATGCGGCCCAACACAAATTCGTAAACTTTCTTAAAATATTGTGAGACTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000375520.4 ENST00000614533.3 ENST00000645413.1 |