Pregenerated sensors for LINC01489 (Homo sapiens)

Ensembl gene IDs: ENSG00000255727

Ensembl transcript IDs: ENST00000542689.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTCCCACTTATAAGTGAGAACATGCAGTGGTTGGTTTTCTGTTCTTaGATGAGTTTCCTGAGGATAATGGCTTCCAAGTCCATCCATGTC	+
Preference number: 5 (lower is better) Translates to: LPLISENMQWLVFCS*MSFLRIMASKSIHV Trigger: GACATGGATGGACTTGGAAGCCATTATCCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS TCA 90 bp	CCTGATGCATCCATATGTTCTCATCATTCAGCTCCCACTTATAAGTaGGAACATGCAGTGGTTGGTTTTCTGTTCTTGCATGAGTTTCCT	+
Preference number: 5 (lower is better) Translates to: PDASICSHHSAPTYK*EHAVVGFLFLHEFP Trigger: AGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAATGATGAGAACATATGGATGCATCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS CCA 90 bp	TATGTTCTCATCATTCAGCTCCCACTTATAAGTGAGAACATGCAGTaGTTGGTTTTCTGTTCTTGCATGAGTTTCCTGAGGATAATGGCT	+
Preference number: 5 (lower is better) Translates to: YVLIIQLPLISENMQ*LVFCSCMSFLRIMA Trigger: AGCCATTATCCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAATGATGAGAACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS CAA 90 bp	GTTCTCATCATTCAGCTCCCACTTATAAGTGAGAACATGCAGTGGTaGGTTTTCTGTTCTTGCATGAGTTTCCTGAGGATAATGGCTTCC	+
Preference number: 6 (lower is better) Translates to: VLIIQLPLISENMQW*VFCSCMSFLRIMAS Trigger: GGAAGCCATTATCCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAATGATGAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS GCA 72 bp	ATAAGTGAGAACATGCAGTGGTTGGTTTTCTGTTCTTaGATGAGTTTCCTGAGGATAATGGCTTCCAAGTCC	+
Preference number: 6 (lower is better) Translates to: ISENMQWLVFCS*MSFLRIMASKS Trigger: GGACTTGGAAGCCATTATCCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS CCA 72 bp	ATCATTCAGCTCCCACTTATAAGTGAGAACATGCAGTaGTTGGTTTTCTGTTCTTGCATGAGTTTCCTGAGG	+
Preference number: 6 (lower is better) Translates to: IIQLPLISENMQ*LVFCSCMSFLR Trigger: CCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS CAA 72 bp	ATTCAGCTCCCACTTATAAGTGAGAACATGCAGTGGTaGGTTTTCTGTTCTTGCATGAGTTTCCTGAGGATA	+
Preference number: 6 (lower is better) Translates to: IQLPLISENMQW*VFCSCMSFLRI Trigger: TATCCTCAGGAAACTCATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS TCA 72 bp	TCCATATGTTCTCATCATTCAGCTCCCACTTATAAGTaGGAACATGCAGTGGTTGGTTTTCTGTTCTTGCAT	+
Preference number: 6 (lower is better) Translates to: SICSHHSAPTYK*EHAVVGFLFLH Trigger: ATGCAAGAACAGAAAACCAACCACTGCATGTTCTCACTTATAAGTGGGAGCTGAATGATGAGAACATATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2
CDS CAA 90 bp	CACTCTATTATCACAGAAAGGGATGCTCTGAGAATTCATGAACGATaGGGGTTTCTGTTCCAGGAAGTATTTACTGAGTTCCTTCTATTT	+
Preference number: 6 (lower is better) Translates to: HSIITERDALRIHER*GFLFQEVFTEFLLF Trigger: AAATAGAAGGAACTCAGTAAATACTTCCTGGAACAGAAACCCCAATCGTTCATGAATTCTCAGAGCATCCCTTTCTGTGATAATAGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000542689.2

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