Pregenerated sensors for LINC01478 (Homo sapiens)
Ensembl gene IDs: ENSG00000267337Ensembl transcript IDs: ENST00000587877.2, ENST00000591487.1, ENST00000653402.1, ENST00000653780.1, ENST00000654586.1, ENST00000656465.1, ENST00000656528.1, ENST00000657927.1, ENST00000659414.1, ENST00000659598.1, ENST00000659766.1, ENST00000660684.1, ENST00000660866.1, ENST00000661590.1, ENST00000662019.1, ENST00000663353.1, ENST00000663869.1, ENST00000664337.1, ENST00000664723.1, ENST00000664969.1, ENST00000665202.1, ENST00000666277.1, ENST00000666688.1, ENST00000667772.1, ENST00000667873.1, ENST00000667908.1, ENST00000668470.1, ENST00000669315.1, ENST00000669871.1, ENST00000670168.1, ENST00000670858.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCGTCTCAATCCAGGATATTGCTGGGCCAGTGGATGGCTGCCAGTaGTATCCTTCCGCTTGTAGAGGAAAGCCCAATGTTTCAAGACCT | + |
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Preference number: 5 (lower is better) Translates to: IVSIQDIAGPVDGCQ*YPSACRGKPNVSRP Trigger: AGGTCTTGAAACATTGGGCTTTCCTCTACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGATTGAGACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS CCA 90 bp | GTAATGCAAATGATATCGTCTCAATCCAGGATATTGCTGGGCCAGTaGATGGCTGCCAGTGCTATCCTTCCGCTTGTAGAGGAAAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VMQMISSQSRILLGQ*MAASAILPLVEESP Trigger: TGGGCTTTCCTCTACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGATTGAGACGATATCATTTGCATTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS TCA 90 bp | AACAGCATCAGGGACCTGCCTCAATTTATGAGGCCAGCATCATCTTaGTACCAAAACCTTCCTACTCTCTCCAGTCTCCCCTCTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: NSIRDLPQFMRPASS*YQNLPTLSSLPSPT Trigger: AGTTGGAGAGGGGAGACTGGAGAGAGTAGGAAGGTTTTGGTATCAAGATGATGCTGGCCTCATAAATTGAGGCAGGTCCCTGATGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656465.1 |
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| CDS GCA 90 bp | AATGATATCGTCTCAATCCAGGATATTGCTGGGCCAGTGGATGGCTaGCAGTGCTATCCTTCCGCTTGTAGAGGAAAGCCCAATGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NDIVSIQDIAGPVDG*QCYPSACRGKPNVS Trigger: TGAAACATTGGGCTTTCCTCTACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGATTGAGACGATATCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS TCA 90 bp | CTGCAGCTCCCCAGTCTTATGACAGATATCTTTGTGTGCTGGGTCTaGCCTGGCAGTCAAGCAGGACAATCTAAAATATACAGTGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQLPSLMTDIFVCWV*PGSQAGQSKIYSER Trigger: CCTCTCACTGTATATTTTAGATTGTCCTGCTTGACTGCCAGGTCAGACCCAGCACACAAAGATATCTGTCATAAGACTGGGGAGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS CCA 90 bp | GCACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAGGTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ALNYSAVCIAVFCTT*VLFTYYHRSLEVEG Trigger: CCCTTCCACCTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000587877.2 ENST00000653402.1 ENST00000654586.1 ENST00000656528.1 ENST00000659766.1 ENST00000660866.1 ENST00000661590.1 ENST00000667908.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS CCA 90 bp | TCCCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAGGTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLNYSAVCIAVFCTT*VLFTYYHRSLEVEG Trigger: CCCTTCCACCTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656465.1 ENST00000663869.1 ENST00000664723.1 ENST00000664969.1 ENST00000669871.1 |
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| CDS GCA 90 bp | AACTCCCAGTCCCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NSQSLNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGGGACTGGGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656465.1 ENST00000663869.1 ENST00000664723.1 ENST00000664969.1 ENST00000669871.1 |
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| CDS GCA 90 bp | CTAGGGGCTGAACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LGAELNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTTCAGCCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660684.1 |
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| CDS CCA 90 bp | GTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAGGTGGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: VLNYSAVCIAVFCTT*VLFTYYHRSLEVEG Trigger: CCCTTCCACCTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000591487.1 ENST00000653780.1 ENST00000664337.1 ENST00000666277.1 ENST00000667772.1 ENST00000667873.1 |
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| CDS CCA 90 bp | GAACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAGGTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELNYSAVCIAVFCTT*VLFTYYHRSLEVEG Trigger: CCCTTCCACCTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660684.1 |
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| CDS CCA 90 bp | CTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAGGTGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLNYSAVCIAVFCTT*VLFTYYHRSLEVEG Trigger: CCCTTCCACCTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659414.1 ENST00000662019.1 ENST00000670168.1 |
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| CDS GCA 90 bp | CCACGTGTTGTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRVVLNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAACAACACGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000591487.1 ENST00000653780.1 ENST00000664337.1 ENST00000666277.1 ENST00000667772.1 ENST00000667873.1 |
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| CDS GCA 90 bp | AGTTCTGGAGCACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGALNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTGCTCCAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654586.1 |
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| CDS CCA 90 bp | CTAGCGCCGTTTACTGCAAGTCGTGCTGTGGATCCTAAAGAACTATaGCTGGAATCTCAGCTCATCATGTTTCTTGGTAGTATGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LAPFTASRAVDPKEL*LESQLIMFLGSMKR Trigger: TCTCTTCATACTACCAAGAAACATGATGAGCTGAGATTCCAGCCATAGTTCTTTAGGATCCACAGCACGACTTGCAGTAAACGGCGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654586.1 ENST00000657927.1 ENST00000664969.1 ENST00000665202.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS CCA 90 bp | ACAAGGGGCTGCCCTAGAAACAAACAACTGAGCCCCATAATGTCATaGTTTGGTGTCAAGAATATTGTTCCTGGGCAGATTCTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: TRGCPRNKQLSPIMS*FGVKNIVPGQILMM Trigger: CATCATCAGAATCTGCCCAGGAACAATATTCTTGACACCAAACCATGACATTATGGGGCTCAGTTGTTTGTTTCTAGGGCAGCCCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000656528.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000664723.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS GCA 90 bp | TGTTGTTCTGCACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: CCSALNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTGCAGAACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000587877.2 ENST00000653402.1 ENST00000656528.1 ENST00000659766.1 ENST00000660866.1 ENST00000661590.1 ENST00000667908.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS CCA 90 bp | CGGATGTCACTAATTCTGCAGCCCTCCAAGTTTGAAGTTGGCCCATaGATTTTTGCTAACTCTCAGATCTTTAGGCTTTTCAGGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: RMSLILQPSKFEVGP*IFANSQIFRLFRIS Trigger: GGAAATCCTGAAAAGCCTAAAGATCTGAGAGTTAGCAAAAATCCATGGGCCAACTTCAAACTTGGAGGGCTGCAGAATTAGTGACATCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653402.1 |
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| CDS GCA 90 bp | AGTGCAGTCATATGGCAACACATTTGCAAGGCAAACTGGGAAATATaGCCAGTTAAACTTAGGGGAAAATGGATATTAGGAGGCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: SAVIWQHICKANWEI*PVKLRGKWILGGKG Trigger: CCCTTTGCCTCCTAATATCCATTTTCCCCTAAGTTTAACTGGGCATATTTCCCAGTTTGCCTTGCAAATGTGTTGCCATATGACTGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS GCA 90 bp | TGTCTCTTTCTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: CLFLLNYSAVCIAVF*TTWVLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAAGAAAGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659414.1 ENST00000662019.1 ENST00000670168.1 |
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| CDS CCA 90 bp | CTTAAATTTCTGAGAGGTATGCTGCATCTTTACCACGACGTGGCTTaGAGGACAGAAGTTCCTTTTTCTTGCATTTTTGTTCAGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: LKFLRGMLHLYHDVA*RTEVPFSCIFVQTS Trigger: GGAGGTCTGAACAAAAATGCAAGAAAAAGGAACTTCTGTCCTCCAAGCCACGTCGTGGTAAAGATGCAGCATACCTCTCAGAAATTTAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000657927.1 ENST00000666688.1 ENST00000669315.1 |
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| CDS TCA 90 bp | TGTATAATGTCTCTTTCTTCTCAATTTATGAGGCCAGCATCATCTTaGTACCAAAACCTTCCTACTCTCTCCAGTCTCCCCTCTCCAACT | + |
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Preference number: 5 (lower is better) Translates to: CIMSLSSQFMRPASS*YQNLPTLSSLPSPT Trigger: AGTTGGAGAGGGGAGACTGGAGAGAGTAGGAAGGTTTTGGTATCAAGATGATGCTGGCCTCATAAATTGAGAAGAAAGAGACATTATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000666277.1 ENST00000667873.1 |
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| CDS GCA 90 bp | ATGGATATTAGGAGGCAAAGGGCAAACAAATTTAAAATCTGGTTCTaGCATATTCCAGGCTATAATCCCTGCAGCACTGTTTCTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: MDIRRQRANKFKIWF*HIPGYNPCSTVSLS Trigger: GCTCAGAGAAACAGTGCTGCAGGGATTATAGCCTGGAATATGGCAGAACCAGATTTTAAATTTGTTTGCCCTTTGCCTCCTAATATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS GCA 90 bp | CCACCTCAGCCTGACAATATCATATTCTCCAGAGAAATAAGAGGCTaGCAAAGATTTCACCTTCTGCAATTTTGTCATAGCAATCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: PPQPDNIIFSREIRG*QRFHLLQFCHSNLL Trigger: GAGAAGATTGCTATGACAAAATTGCAGAAGGTGAAATCTTTGGCAGCCTCTTATTTCTCTGGAGAATATGATATTGTCAGGCTGAGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 28 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000669871.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS TCA 90 bp | CTCATCATGTTTCTTGGTAGTATGAAGAGAACACTTTTTCCATCATaGAAGCTAGTCCAGAAGTTCTGGAGCACTGAATTATTCCGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIMFLGSMKRTLFPS*KLVQKFWSTELFRS Trigger: ACTGCGGAATAATTCAGTGCTCCAGAACTTCTGGACTAGCTTTCATGATGGAAAAAGTGTTCTCTTCATACTACCAAGAAACATGATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000654586.1 |
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| CDS GCA 90 bp | ATTATATCATTGCTCACAATGTGCATACTGTATGCTCTGTTCCAATaGAGTTCAACAAATTTATTACAATGTGCCACAGGTGACTCGATC | + |
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Preference number: 5 (lower is better) Translates to: IISLLTMCILYALFQ*SSTNLLQCATGDSI Trigger: GATCGAGTCACCTGTGGCACATTGTAATAAATTTGTTGAACTGCATTGGAACAGAGCATACAGTATGCACATTGTGAGCAATGATATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669315.1 |
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| CDS GCA 72 bp | GTCTCAATCCAGGATATTGCTGGGCCAGTGGATGGCTaGCAGTGCTATCCTTCCGCTTGTAGAGGAAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: VSIQDIAGPVDG*QCYPSACRGKP Trigger: GGGCTTTCCTCTACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGATTGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS GCA 72 bp | ATCCAGGATATTGCTGGGCCAGTGGATGGCTGCCAGTaGTATCCTTCCGCTTGTAGAGGAAAGCCCAATGTT | + |
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Preference number: 6 (lower is better) Translates to: IQDIAGPVDGCQ*YPSACRGKPNV Trigger: AACATTGGGCTTTCCTCTACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS CAA 90 bp | ACAGTCAGGAATAACAGCATCAGGGACCTGCCAGGATTTATAAGCTaGGCCTTTCACACAGAGATGACTCGTTGGGCAGGGAGGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: TVRNNSIRDLPGFIS*AFHTEMTRWAGRKA Trigger: TGCTTTCCTCCCTGCCCAACGAGTCATCTCTGTGTGAAAGGCCAAGCTTATAAATCCTGGCAGGTCCCTGATGCTGTTATTCCTGACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591487.1 ENST00000659598.1 |
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| CDS CAA 72 bp | AATAACAGCATCAGGGACCTGCCAGGATTTATAAGCTaGGCCTTTCACACAGAGATGACTCGTTGGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: NNSIRDLPGFIS*AFHTEMTRWAG Trigger: CCCTGCCCAACGAGTCATCTCTGTGTGAAAGGCCAAGCTTATAAATCCTGGCAGGTCCCTGATGCTGTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000591487.1 ENST00000659598.1 |
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| CDS CAA 72 bp | CAGGGACCTGCCTCAATTTATGAGGCCAGCATCATCTaGATACCAAAACCTTCCTACTCTCTCCAGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: QGPASIYEASII*IPKPSYSLQSP Trigger: GGGAGACTGGAGAGAGTAGGAAGGTTTTGGTATCAAGATGATGCTGGCCTCATAAATTGAGGCAGGTCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656465.1 |
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| CDS TCA 72 bp | TTCAGTGAACAGGAGGATGTGATGAACAAGTTGTACTaGGCAATCCACGTGTTGTTCTGCACTGGGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: FSEQEDVMNKLY*AIHVLFCTGRG Trigger: CCCTCTCCCAGTGCAGAACAACACGTGGATTGCTCAGTACAACTTGTTCATCACATCCTCCTGTTCACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660684.1 |
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| CDS CAA 72 bp | GATGTATCACAAATGAAGGCCGTGAAACAGCAAAGATaGCAGCCAGCTTCTTCCCCTCTGTTCAGAGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: DVSQMKAVKQQR*QPASSPLFRGL Trigger: GAGACCTCTGAACAGAGGGGAAGAAGCTGGCTGCAATCTTTGCTGTTTCACGGCCTTCATTTGTGATACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000591487.1 ENST00000656465.1 ENST00000659598.1 |
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| CDS CAA 90 bp | TTCATTCAGCAAGTAATGCAAATGATATCGTCTCAATCCAGGATATaGCTGGGCCAGTGGATGGCTGCCAGTGCTATCCTTCCGCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: FIQQVMQMISSQSRI*LGQWMAASAILPLV Trigger: TACAAGCGGAAGGATAGCACTGGCAGCCATCCACTGGCCCAGCAATATCCTGGATTGAGACGATATCATTTGCATTACTTGCTGAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS CAA 90 bp | AGTTTTCTGGATGTATCACAAATGAAGGCCGTGAAACAGCAAAGATaGCAGCCAGCTTCTTCCCCTCTGTTCAGAGGTCTCACACAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SFLDVSQMKAVKQQR*QPASSPLFRGLTQS Trigger: TGACTGTGTGAGACCTCTGAACAGAGGGGAAGAAGCTGGCTGCAATCTTTGCTGTTTCACGGCCTTCATTTGTGATACATCCAGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000591487.1 ENST00000656465.1 ENST00000659598.1 |
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| CDS GCA 72 bp | GCACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALNYSAVCIAVF*TTWVLFTYYHR Trigger: TCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000587877.2 ENST00000653402.1 ENST00000654586.1 ENST00000656528.1 ENST00000659766.1 ENST00000660866.1 ENST00000661590.1 ENST00000667908.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS GCA 72 bp | TCCCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLNYSAVCIAVF*TTWVLFTYYHR Trigger: TCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000656465.1 ENST00000663869.1 ENST00000664723.1 ENST00000664969.1 ENST00000669871.1 |
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| CDS CAA 72 bp | CAAGTTTCTGCAAAGGAATCCACAGGATTTATAAGCTaGGCCTTTCACACAGAGATGACTCGTTGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVSAKESTGFIS*AFHTEMTRWAG Trigger: CCCTGCCCAACGAGTCATCTCTGTGTGAAAGGCCAAGCTTATAAATCCTGTGGATTCCTTTGCAGAAACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653402.1 |
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| CDS TCA 72 bp | TCTTATGAAAAAGAACACTGCAGCTCCCCAGTCTTATaGCAGATATCTTTGTGTGCTGGGTCTGACCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SYEKEHCSSPVL*QISLCAGSDLA Trigger: TGCCAGGTCAGACCCAGCACACAAAGATATCTGTCATAAGACTGGGGAGCTGCAGTGTTCTTTTTCATAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS GCA 72 bp | GTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: VLNYSAVCIAVF*TTWVLFTYYHR Trigger: TCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000591487.1 ENST00000653780.1 ENST00000664337.1 ENST00000666277.1 ENST00000667772.1 ENST00000667873.1 |
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| CDS GCA 72 bp | GAACTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: ELNYSAVCIAVF*TTWVLFTYYHR Trigger: TCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660684.1 |
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| CDS GCA 72 bp | CTTCTGAATTATTCCGCAGTGTGTATCGCAGTATTCTaGACCACGTGGGTCCTGTTCACCTATTATCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLNYSAVCIAVF*TTWVLFTYYHR Trigger: TCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATAATTCAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000659414.1 ENST00000662019.1 ENST00000670168.1 |
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| CDS CCA 72 bp | TATTCCGCAGTGTGTATCGCAGTATTCTGCACCACGTaGGTCCTGTTCACCTATTATCACAGAAGTTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YSAVCIAVFCTT*VLFTYYHRSLE Trigger: CTCTAAACTTCTGTGATAATAGGTGAACAGGACCCACGTGGTGCAGAATACTGCGATACACACTGCGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 25 transcripts: ENST00000587877.2 ENST00000591487.1 ENST00000653402.1 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000659414.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000666277.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000669871.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS CCA 72 bp | TTTATAAGCTTGGCCTTTCACACAGAGATGACTCGTTaGGCAGGGAGGAAAGCAGCTCAGAGAATATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FISLAFHTEMTR*AGRKAAQRIFP Trigger: TGGAAATATTCTCTGAGCTGCTTTCCTCCCTGCCCAACGAGTCATCTCTGTGTGAAAGGCCAAGCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000587877.2 ENST00000591487.1 ENST00000653402.1 ENST00000653780.1 ENST00000656528.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000664337.1 ENST00000665202.1 ENST00000666277.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS TCA 72 bp | CCCAGTCTTATGACAGATATCTTTGTGTGCTGGGTCTaGCCTGGCAGTCAAGCAGGACAATCTAAAATATAC | + |
|
Preference number: 6 (lower is better) Translates to: PSLMTDIFVCWV*PGSQAGQSKIY Trigger: GTATATTTTAGATTGTCCTGCTTGACTGCCAGGTCAGACCCAGCACACAAAGATATCTGTCATAAGACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS TCA 72 bp | TCAGGAATAACAGCATCAGGGACCTGCCTCAATTTATaGGGCCAGCATCATCTTGATACCAAAACCTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SGITASGTCLNL*GQHHLDTKTFL Trigger: TAGGAAGGTTTTGGTATCAAGATGATGCTGGCCTCATAAATTGAGGCAGGTCCCTGATGCTGTTATTCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656465.1 |
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| CDS CCA 72 bp | TTGCTGCCTTCAGCTCATTCTCTGTCACTATCCACATaGCTGGGAATATTATTCCGTTATAGGCAATGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LLPSAHSLSLST*LGILFRYRQCM Trigger: CATGCATTGCCTATAACGGAATAATATTCCCAGCCATGTGGATAGTGACAGAGAATGAGCTGAAGGCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS CCA 72 bp | CTGAGAGGTATGCTGCATCTTTACCACGACGTGGCTTaGAGGACAGAAGTTCCTTTTTCTTGCATTTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRGMLHLYHDVA*RTEVPFSCIFV Trigger: AACAAAAATGCAAGAAAAAGGAACTTCTGTCCTCCAAGCCACGTCGTGGTAAAGATGCAGCATACCTCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000657927.1 ENST00000663353.1 ENST00000666688.1 ENST00000669315.1 |
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| CDS CCA 72 bp | TCTTGCATTTTTGTTCAGACCTCCCTCCTAAGCCTGTaGCACAATGATAAACCTGGGATCATAGAGTTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SCIFVQTSLLSL*HNDKPGIIELL Trigger: TAGCAACTCTATGATCCCAGGTTTATCATTGTGCCACAGGCTTAGGAGGGAGGTCTGAACAAAAATGCAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669315.1 |
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| CDS CAA 72 bp | TCTGAGAGGTATGCTGCATCTTTACCACGACGTGGCTaGGAGGACAGAAGTTCCTTTTTCTTGCATTTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SERYAASLPRRG*EDRSSFFLHFC Trigger: ACAAAAATGCAAGAAAAAGGAACTTCTGTCCTCCAAGCCACGTCGTGGTAAAGATGCAGCATACCTCTCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000657927.1 ENST00000663353.1 ENST00000666688.1 ENST00000669315.1 |
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| CDS TCA 72 bp | TCCCAGGCAATTTTGGCACTTCTGGTGTTCAGGCCGTaGGTAAATTACTTGCAACATCTTAGACCATTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SQAILALLVFRP*VNYLQHLRPLE Trigger: TTCTAATGGTCTAAGATGTTGCAAGTAATTTACTCACGGCCTGAACACCAGAAGTGCCAAAATTGCCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000669871.1 |
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| CDS GCA 72 bp | ATGGTGCCAAAAGGATGCCATCCTGTTTTCTCTTCATaGTTCCTCAAAGCCACTTCGATTCAATGCATGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MVPKGCHPVFSS*FLKATSIQCMF Trigger: AAACATGCATTGAATCGAAGTGGCTTTGAGGAAGCATGAAGAGAAAACAGGATGGCATCCTTTTGGCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000656528.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000664723.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS CCA 72 bp | TTTACTGCAAGTCGTGCTGTGGATCCTAAAGAACTATaGCTGGAATCTCAGCTCATCATGTTTCTTGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FTASRAVDPKEL*LESQLIMFLGS Trigger: ACTACCAAGAAACATGATGAGCTGAGATTCCAGCCATAGTTCTTTAGGATCCACAGCACGACTTGCAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000654586.1 ENST00000657927.1 ENST00000664969.1 ENST00000665202.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS CCA 72 bp | TGCCCTAGAAACAAACAACTGAGCCCCATAATGTCATaGTTTGGTGTCAAGAATATTGTTCCTGGGCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: CPRNKQLSPIMS*FGVKNIVPGQI Trigger: AATCTGCCCAGGAACAATATTCTTGACACCAAACCATGACATTATGGGGCTCAGTTGTTTGTTTCTAGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000656528.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000664723.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS CAA 90 bp | TTGTATAATGTCTCTTTCTTCTCAATTTATGAGGCCAGCATCATCTaGATACCAAAACCTTCCTACTCTCTCCAGTCTCCCCTCTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LYNVSFFSIYEASII*IPKPSYSLQSPLSN Trigger: GTTGGAGAGGGGAGACTGGAGAGAGTAGGAAGGTTTTGGTATCAAGATGATGCTGGCCTCATAAATTGAGAAGAAAGAGACATTATACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000666277.1 ENST00000667873.1 |
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| CDS TCA 72 bp | TTCAGTGAACAGGAGGATGTGATGAACAAGTTGTACTaGGCAATCCACGTGTTGTTCTGCACTGAATTATTC | + |
|
Preference number: 6 (lower is better) Translates to: FSEQEDVMNKLY*AIHVLFCTELF Trigger: GAATAATTCAGTGCAGAACAACACGTGGATTGCTCAGTACAACTTGTTCATCACATCCTCCTGTTCACTGAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000587877.2 ENST00000653402.1 ENST00000656528.1 ENST00000659598.1 ENST00000659766.1 ENST00000660866.1 ENST00000661590.1 ENST00000667908.1 ENST00000668470.1 ENST00000670858.1 |
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| CDS CAA 72 bp | ATTTGTATAATGTCTCTTTCTTCAGGATTTATAAGCTaGGCCTTTCACACAGAGATGACTCGTTGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ICIMSLSSGFIS*AFHTEMTRWAG Trigger: CCCTGCCCAACGAGTCATCTCTGTGTGAAAGGCCAAGCTTATAAATCCTGAAGAAAGAGACATTATACAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000656528.1 ENST00000660866.1 ENST00000667772.1 ENST00000667908.1 |
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| CDS CAA 72 bp | GATGGCAAGGGCTGGTCCAGATTTGAAAATGATATCTaGGACTTAGTTGAGGTTATCTGCAGTCATTTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGKGWSRFENDI*DLVEVICSHFH Trigger: GTGAAAATGACTGCAGATAACCTCAACTAAGTCCAAGATATCATTTTCAAATCTGGACCAGCCCTTGCCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 26 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000668470.1 ENST00000669871.1 ENST00000670858.1 |
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| CDS TCA 72 bp | TCTGAAATTCCCCCTTACTCCACATCTTTCGACTCCTaGTTTCTTATCATTGTTGTGACAACAGCTTGCATT | + |
|
Preference number: 6 (lower is better) Translates to: SEIPPYSTSFDS*FLIIVVTTACI Trigger: AATGCAAGCTGTTGTCACAACAATGATAAGAAATCAGGAGTCGAAAGATGTGGAGTAAGGGGGAATTTCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 28 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000654586.1 ENST00000656465.1 ENST00000656528.1 ENST00000657927.1 ENST00000659414.1 ENST00000659598.1 ENST00000659766.1 ENST00000660684.1 ENST00000660866.1 ENST00000661590.1 ENST00000662019.1 ENST00000663353.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000664969.1 ENST00000665202.1 ENST00000666277.1 ENST00000666688.1 ENST00000667772.1 ENST00000667873.1 ENST00000667908.1 ENST00000668470.1 ENST00000669871.1 ENST00000670168.1 ENST00000670858.1 |
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| CDS CAA 90 bp | CACATCTTTCGACTCCTGATTTCTTATCATTGTTGTGACAACAGCTaGCATTTGTATAATGTCTCTTTCTTCTTCCTACTCTCTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HIFRLLISYHCCDNS*HLYNVSFFFLLSPV Trigger: GACTGGAGAGAGTAGGAAGAAGAAAGAGACATTATACAAATGCAAGCTGTTGTCACAACAATGATAAGAAATCAGGAGTCGAAAGATGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000659766.1 ENST00000660684.1 ENST00000661590.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000669871.1 |
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| CDS CAA 90 bp | CTTTCTTCTTTGAATGAGATTTTAGTTGGGTCTTTCTTGTTGATGTaGTTGTTGTTTTCAACCATCAGGCTACTCTATCATAGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLNEILVGSFLLM*LLFSTIRLLYHRAA Trigger: AGCAGCCCTATGATAGAGTAGCCTGATGGTTGAAAACAACAACAACATCAACAAGAAAGACCCAACTAAAATCTCATTCAAAGAAGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000591487.1 ENST00000656465.1 ENST00000659598.1 |
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| CDS CAA 90 bp | CACATCTTTCGACTCCTGATTTCTTATCATTGTTGTGACAACAGCTaGCATTTGTATAATGTCTCTTTCTTCTCAATTTATGAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIFRLLISYHCCDNS*HLYNVSFFSIYEAS Trigger: GCTGGCCTCATAAATTGAGAAGAAAGAGACATTATACAAATGCAAGCTGTTGTCACAACAATGATAAGAAATCAGGAGTCGAAAGATGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000666277.1 ENST00000667873.1 |
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| CDS CAA 90 bp | TTTCGACTCCTGATTTCTTATCATTGTTGTGACAACAGCTTGCATTaGTATAATGTCTCTTTCTTCCATCCAAGCAAAACCTGTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FRLLISYHCCDNSLH*YNVSFFHPSKTCSL Trigger: AAGGGAACAGGTTTTGCTTGGATGGAAGAAAGAGACATTATACAAATGCAAGCTGTTGTCACAACAATGATAAGAAATCAGGAGTCGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666688.1 |
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| CDS TCA 72 bp | TGTTTCCAACTTGAAGCACTCATTAACACTACTTCTTaGGGACTTTTCGAGTTAGCTCACTTTTTACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFQLEALINTTS*GLFELAHFLHP Trigger: AGGATGTAAAAAGTGAGCTAACTCGAAAAGTCCTCAAGAAGTAGTGTTAATGAGTGCTTCAAGTTGGAAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000657927.1 ENST00000663353.1 ENST00000666688.1 |
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| CDS GCA 72 bp | TTTATTAGACAAAGTGCAGTCATATGGCAACACATTTaGAAGGCAAACTGGGAAATATGCCCAGTTAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: FIRQSAVIWQHI*KANWEICPVKL Trigger: AAGTTTAACTGGGCATATTTCCCAGTTTGCCTTGCAAATGTGTTGCCATATGACTGCACTTTGTCTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000587877.2 ENST00000654586.1 ENST00000659414.1 ENST00000664337.1 |
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| CDS CAA 90 bp | CACATCTTTCGACTCCTGATTTCTTATCATTGTTGTGACAACAGCTaGCATTTGTATAATGTCTCTTTCTTCAGGATTTATAAGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HIFRLLISYHCCDNS*HLYNVSFFRIYKLG Trigger: GCCAAGCTTATAAATCCTGAAGAAAGAGACATTATACAAATGCAAGCTGTTGTCACAACAATGATAAGAAATCAGGAGTCGAAAGATGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000587877.2 ENST00000653780.1 ENST00000656528.1 ENST00000660866.1 ENST00000667772.1 ENST00000667908.1 |
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| CDS CAA 90 bp | ATGTCTCTTTCTTCTTTGAATGAGATTTTAGTTGGGTCTTTCTTGTaGATGTTGTTGTTGTTTTCAACCATCAGGCTACTCTATCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: MSLSSLNEILVGSFL*MLLLFSTIRLLYHR Trigger: CCTATGATAGAGTAGCCTGATGGTTGAAAACAACAACAACATCAACAAGAAAGACCCAACTAAAATCTCATTCAAAGAAGAAAGAGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000591487.1 ENST00000656465.1 ENST00000659598.1 |
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| CDS CAA 72 bp | CTGATTTCTTATCATTGTTGTGACAACAGCTTGCATTaGTATAATGTCTCTTTCTTCTTCCTACTCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LISYHCCDNSLH*YNVSFFFLLSP Trigger: TGGAGAGAGTAGGAAGAAGAAAGAGACATTATACAAATGCAAGCTGTTGTCACAACAATGATAAGAAATCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000659766.1 ENST00000660684.1 ENST00000661590.1 ENST00000663869.1 ENST00000664337.1 ENST00000664723.1 ENST00000669871.1 |
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| CDS GCA 72 bp | TATCATTTTGTTGGAATTATATCATTGCTCACAATGTaGATACTGTATGCTCTGTTCCAATGCAGTTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: YHFVGIISLLTM*ILYALFQCSST Trigger: TGTTGAACTGCATTGGAACAGAGCATACAGTATGCACATTGTGAGCAATGATATAATTCCAACAAAATGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669315.1 |
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