Pregenerated sensors for LINC01450 (Homo sapiens)
Ensembl gene IDs: ENSG00000232458Ensembl transcript IDs: ENST00000443406.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGTCTTCCTGGAGACACTGCGGCTCAGCAGCCCCTGCGGAGGCCTaGCTGCATCTGGTGAAACTTCCTTTTGACACAGGTGTTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSSWRHCGSAAPAEA*LHLVKLPFDTGVGD Trigger: GTCACCAACACCTGTGTCAAAAGGAAGTTTCACCAGATGCAGTCAGGCCTCCGCAGGGGCTGCTGAGCCGCAGTGTCTCCAGGAAGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS TCA 90 bp | AACAGAAGGCCAGCAGCACGGTGGTCTGATGAGTGGATTGGAGTGTaGCTCATCAGCGGGTCTTCCTGGAGACACTGCGGCTCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NRRPAARWSDEWIGV*LISGSSWRHCGSAA Trigger: GGCTGCTGAGCCGCAGTGTCTCCAGGAAGACCCGCTGATGAGTCACACTCCAATCCACTCATCAGACCACCGTGCTGCTGGCCTTCTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS TCA 90 bp | GACACTGCGGCTCAGCAGCCCCTGCGGAGGCCTGACTGCATCTGGTaGAACTTCCTTTTGACACAGGTGTTGGTGACATGGTCAAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: DTAAQQPLRRPDCIW*NFLLTQVLVTWSSH Trigger: ATGACTTGACCATGTCACCAACACCTGTGTCAAAAGGAAGTTTCACCAGATGCAGTCAGGCCTCCGCAGGGGCTGCTGAGCCGCAGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | CGCTCAGAGCCTAACTCTGTGAGGCGGTGGGAGGCGAGTAACAGCTaGCCACCTGTTAAATTGGTTTTGGCAGATCCGTGTCCTGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RSEPNSVRRWEASNS*PPVKLVLADPCPVV Trigger: AACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCGCCTCACAGAGTTAGGCTCTGAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | CTCTTCTGCACAGGCCAGAGTGCAATCTCACCAGTATGCAAAAGGTaGTGCCAGGCTCCCAGAGGCAGGGATGTTATCCTTGCCATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFCTGQSAISPVCKR*CQAPRGRDVILAIA Trigger: AGCTATGGCAAGGATAACATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCCTGTGCAGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | AGTAGCCTCCTCTTCTGCACAGGCCAGAGTGCAATCTCACCAGTATaGAAAAGGTGCTGCCAGGCTCCCAGAGGCAGGGATGTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLLFCTGQSAISPV*KRCCQAPRGRDVIL Trigger: AAGGATAACATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCCTGTGCAGAAGAGGAGGCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | TTCTGCACAGGCCAGAGTGCAATCTCACCAGTATGCAAAAGGTGCTaGCAGGCTCCCAGAGGCAGGGATGTTATCCTTGCCATAGCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCTGQSAISPVCKRC*QAPRGRDVILAIAD Trigger: ATCAGCTATGGCAAGGATAACATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCCTGTGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | AAAAGACTCACCCTGTGCCCTCTCTCCCATCACCACAGAGTCTCATaGTATCCAGTAGCCTCCTCTTCTGCACAGGCCAGAGTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLTLCPLSHHHRVS*YPVASSSAQARVQS Trigger: AGATTGCACTCTGGCCTGTGCAGAAGAGGAGGCTACTGGATAGCATGAGACTCTGTGGTGATGGGAGAGAGGGCACAGGGTGAGTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | GGCGGTGGGAGGCGAGTAACAGCTGCCCACCTGTTAAATTGGTTTTaGCAGATCCGTGTCCTGTGGTTGAGATATATCTGGTTCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: GGGRRVTAAHLLNWF*QIRVLWLRYIWFRT Trigger: TGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | CTGTGGGGTGTTGGTAGGAGAGTAACAGCTGCTCACCTGTTAAATTaGTTTTGGCAGATCCCTATGCTGTGGTTGAGATATCCGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LWGVGRRVTAAHLLN*FWQIPMLWLRYPVQ Trigger: CTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTGAGCAGCTGTTACTCTCCTACCAACACCCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | GGTGTTGGTAGGAGAGTAACAGCTGCTCACCTGTTAAATTGGTTTTaGCAGATCCCTATGCTGTGGTTGAGATATCCGGTTCAGGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVGRRVTAAHLLNWF*QIPMLWLRYPVQDN Trigger: GTTGTCCTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTGAGCAGCTGTTACTCTCCTACCAACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS TCA 90 bp | CAACTTAGGTGTTTCTCAGGTTCTTTGTTTTGTTACCCAAATGGGTaGGAAAAGACTCACCCTGTGCCCTCTCTCCCATCACCACAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QLRCFSGSLFCYPNG*EKTHPVPSLPSPQS Trigger: ACTCTGTGGTGATGGGAGAGAGGGCACAGGGTGAGTCTTTTCTCACCCATTTGGGTAACAAAACAAAGAACCTGAGAAACACCTAAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | ACAGCTGCCCACCTGTTAAATTGGTTTTGGCAGATCCGTGTCCTGTaGTTGAGATATATCTGGTTCAGGACAACACATCTGCCTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TAAHLLNWFWQIRVL*LRYIWFRTTHLPST Trigger: AGTTGAAGGCAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | AAACTTTATGTAGGTACTAAAGACGCATTTGCATTTTTCTCCAAGTaGTCTGGCTCTTACCAGACAACAGAAGGCCAGCAGCACGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLYVGTKDAFAFFSK*SGSYQTTEGQQHGG Trigger: ACCACCGTGCTGCTGGCCTTCTGTTGTCTGGTAAGAGCCAGAGCACTTGGAGAAAAATGCAAATGCGTCTTTAGTACCTACATAAAGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | ACAGCTGCTCACCTGTTAAATTGGTTTTGGCAGATCCCTATGCTGTaGTTGAGATATCCGGTTCAGGACAACATATCAGCCTTCAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: TAAHLLNWFWQIPML*LRYPVQDNISAFNY Trigger: GTAGTTGAAGGCTGATATGTTGTCCTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTGAGCAGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | TTAAATTGGTTTTGGCAGATCCGTGTCCTGTGGTTGAGATATATCTaGTTCAGGACAACACATCTGCCTTCAACTACCTCATCACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LNWFWQIRVLWLRYI*FRTTHLPSTTSSHH Trigger: GTGGTGTGATGAGGTAGTTGAAGGCAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | TTTGCTTTGACTGCCAGGGGGCTAAGAGCCAAATTTAACTATGTTTaGAGCAATGTAAGCCTATATGGGCCTGTGTATTTGCATCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FALTARGLRAKFNYV*SNVSLYGPVYLHPC Trigger: ACAAGGATGCAAATACACAGGCCCATATAGGCTTACATTGCTGCAAACATAGTTAAATTTGGCTCTTAGCCCCCTGGCAGTCAAAGCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 90 bp | CCAGAGATGTGTATCTTAGCTCTTTGTTCACTATCCAGAAAGCTGTaGTTGTGGGTGCATCAGACTTCATTTTTCTTTTCTTACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PEMCILALCSLSRKL*LWVHQTSFFFSYIF Trigger: AAAGATGTAAGAAAAGAAAAATGAAGTCTGATGCACCCACAAGCACAGCTTTCTGGATAGTGAACAAAGAGCTAAGATACACATCTCTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 90 bp | TTCTTACATCTTTTGAAAAATTTGATGCTTACCATCATGGAACCCTaGGCATTTCCAAGCTCATCCTTCTCTGAGTTCAAGTCTGTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLHLLKNLMLTIMEP*AFPSSSFSEFKSVK Trigger: CTTTACAGACTTGAACTCAGAGAAGGATGAGCTTGGAAATGCCCAGGGTTCCATGATGGTAAGCATCAAATTTTTCAAAAGATGTAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | TACCAGACAACAGAAGGCCAGCAGCACGGTGGTCTGATGAGTGGATaGGAGTGTGACTCATCAGCGGGTCTTCCTGGAGACACTGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: YQTTEGQQHGGLMSG*ECDSSAGLPGDTAA Trigger: AGCCGCAGTGTCTCCAGGAAGACCCGCTGATGAGTCACACTCCAATCCACTCATCAGACCACCGTGCTGCTGGCCTTCTGTTGTCTGGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS TCA 72 bp | GCTCAGCAGCCCCTGCGGAGGCCTGACTGCATCTGGTaGAACTTCCTTTTGACACAGGTGTTGGTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: AQQPLRRPDCIW*NFLLTQVLVTW Trigger: CCATGTCACCAACACCTGTGTCAAAAGGAAGTTTCACCAGATGCAGTCAGGCCTCCGCAGGGGCTGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | GGCCAGAGTGCAATCTCACCAGTATGCAAAAGGTGCTaGCAGGCTCCCAGAGGCAGGGATGTTATCCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GQSAISPVCKRC*QAPRGRDVILA Trigger: GGCAAGGATAACATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | CTCTTCTGCACAGGCCAGAGTGCAATCTCACCAGTATaGAAAAGGTGCTGCCAGGCTCCCAGAGGCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LFCTGQSAISPV*KRCCQAPRGRD Trigger: ATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCCTGTGCAGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | ACAGGCCAGAGTGCAATCTCACCAGTATGCAAAAGGTaGTGCCAGGCTCCCAGAGGCAGGGATGTTATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGQSAISPVCKR*CQAPRGRDVIL Trigger: AAGGATAACATCCCTGCCTCTGGGAGCCTGGCAGCACCTTTTGCATACTGGTGAGATTGCACTCTGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | CCTAACTCTGTGAGGCGGTGGGAGGCGAGTAACAGCTaGCCACCTGTTAAATTGGTTTTGGCAGATCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PNSVRRWEASNS*PPVKLVLADPC Trigger: ACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCGCCTCACAGAGTTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 72 bp | CGGTGGGAGGCGAGTAACAGCTGCCCACCTGTTAAATaGGTTTTGGCAGATCCGTGTCCTGTGGTTGAGATA | + |
|
Preference number: 6 (lower is better) Translates to: RWEASNSCPPVK*VLADPCPVVEI Trigger: TATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | AGGCGGTGGGAGGCGAGTAACAGCTGCCCACCTGTTAAATTGGTTTaGGCAGATCCGTGTCCTGTGGTTGAGATATATCTGGTTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RRWEASNSCPPVKLV*ADPCPVVEIYLVQD Trigger: GTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | TCTGTGAGGCGGTGGGAGGCGAGTAACAGCTGCCCACCTGTTAAATaGGTTTTGGCAGATCCGTGTCCTGTGGTTGAGATATATCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SVRRWEASNSCPPVK*VLADPCPVVEIYLV Trigger: AACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACCGCCTCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | GGTGGGAGGCGAGTAACAGCTGCCCACCTGTTAAATTaGTTTTGGCAGATCCGTGTCCTGTGGTTGAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: GGRRVTAAHLLN*FWQIRVLWLRY Trigger: ATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | AGGCGAGTAACAGCTGCCCACCTGTTAAATTGGTTTTaGCAGATCCGTGTCCTGTGGTTGAGATATATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRVTAAHLLNWF*QIRVLWLRYIW Trigger: CCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 72 bp | GAGGCGAGTAACAGCTGCCCACCTGTTAAATTGGTTTaGGCAGATCCGTGTCCTGTGGTTGAGATATATCTG | + |
|
Preference number: 6 (lower is better) Translates to: EASNSCPPVKLV*ADPCPVVEIYL Trigger: CAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGCTGTTACTCGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | GCTGCCCACCTGTTAAATTGGTTTTGGCAGATCCGTGTCCTGTGGTaGAGATATATCTGGTTCAGGACAACACATCTGCCTTCAACTACC | + |
|
Preference number: 6 (lower is better) Translates to: AAHLLNWFWQIRVLW*RYIWFRTTHLPSTT Trigger: GGTAGTTGAAGGCAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTGGGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | GCTGCTCACCTGTTAAATTGGTTTTGGCAGATCCCTATGCTGTGGTaGAGATATCCGGTTCAGGACAACATATCAGCCTTCAACTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: AAHLLNWFWQIPMLW*RYPVQDNISAFNYL Trigger: GAGGTAGTTGAAGGCTGATATGTTGTCCTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTGAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | GTAGGTACTAAAGACGCATTTGCATTTTTCTCCAAGTaGTCTGGCTCTTACCAGACAACAGAAGGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGTKDAFAFFSK*SGSYQTTEGQQ Trigger: CTGCTGGCCTTCTGTTGTCTGGTAAGAGCCAGAGCACTTGGAGAAAAATGCAAATGCGTCTTTAGTACCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | TTTTGGCAGATCCGTGTCCTGTGGTTGAGATATATCTaGTTCAGGACAACACATCTGCCTTCAACTACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FWQIRVLWLRYI*FRTTHLPSTTS Trigger: TGAGGTAGTTGAAGGCAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | CACCTGTTAAATTGGTTTTGGCAGATCCCTATGCTGTaGTTGAGATATCCGGTTCAGGACAACATATCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HLLNWFWQIPML*LRYPVQDNISA Trigger: GGCTGATATGTTGTCCTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | ACTGCCAGGGGGCTAAGAGCCAAATTTAACTATGTTTaGAGCAATGTAAGCCTATATGGGCCTGTGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: TARGLRAKFNYV*SNVSLYGPVYL Trigger: CAAATACACAGGCCCATATAGGCTTACATTGCTGCAAACATAGTTAAATTTGGCTCTTAGCCCCCTGGCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | CACCTGTTAAATTGGTTTTGGCAGATCCGTGTCCTGTaGTTGAGATATATCTGGTTCAGGACAACACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLNWFWQIRVL*LRYIWFRTTHL Trigger: CAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | GTTGGTAGGAGAGTAACAGCTGCTCACCTGTTAAATTaGTTTTGGCAGATCCCTATGCTGTGGTTGAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: VGRRVTAAHLLN*FWQIPMLWLRY Trigger: ATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAGGTGAGCAGCTGTTACTCTCCTACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 72 bp | CTGTTAAATTGGTTTTGGCAGATCCGTGTCCTGTGGTaGAGATATATCTGGTTCAGGACAACACATCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LLNWFWQIRVLW*RYIWFRTTHLP Trigger: AGGCAGATGTGTTGTCCTGAACCAGATATATCTCAACCACAGGACACGGATCTGCCAAAACCAATTTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 72 bp | CTGTTAAATTGGTTTTGGCAGATCCCTATGCTGTGGTaGAGATATCCGGTTCAGGACAACATATCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLNWFWQIPMLW*RYPVQDNISAF Trigger: GAAGGCTGATATGTTGTCCTGAACCGGATATCTCAACCACAGCATAGGGATCTGCCAAAACCAATTTAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 90 bp | TCTAGAGGTTGTTTCAATGAACCCAGAGATGTGTATCTTAGCTCTTaGTTCACTATCCAGAAAGCTGTGCTTGTGGGTGCATCAGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGCFNEPRDVYLSS*FTIQKAVLVGASDF Trigger: GAAGTCTGATGCACCCACAAGCACAGCTTTCTGGATAGTGAACAAAGAGCTAAGATACACATCTCTGGGTTCATTGAAACAACCTCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CCA 72 bp | CTTTTGAAAAATTTGATGCTTACCATCATGGAACCCTaGGCATTTCCAAGCTCATCCTTCTCTGAGTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LLKNLMLTIMEP*AFPSSSFSEFK Trigger: CTTGAACTCAGAGAAGGATGAGCTTGGAAATGCCCAGGGTTCCATGATGGTAAGCATCAAATTTTTCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS GCA 72 bp | TGTATCTTAGCTCTTTGTTCACTATCCAGAAAGCTGTaGTTGTGGGTGCATCAGACTTCATTTTTCTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CILALCSLSRKL*LWVHQTSFFFS Trigger: AGAAAAGAAAAATGAAGTCTGATGCACCCACAAGCACAGCTTTCTGGATAGTGAACAAAGAGCTAAGATACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS CAA 72 bp | GCCATAGCTGATGAGATTTGGGATCAATTCCTCTTCTaGTCCACAGCTTTAAGTCTTATTTGCATATTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: AIADEIWDQFLF*STALSLICIFL Trigger: CAGAAATATGCAAATAAGACTTAAAGCTGTGGACAAGAAGAGGAATTGATCCCAAATCTCATCAGCTATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||
| CDS TCA 72 bp | AGAAGCTTCATACTTGGGTTTACAAATTGCCTAAAGTaGCTTAAACATAGAGGAATAGACTGCCACATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RSFILGFTNCLK*LKHRGIDCHIG Trigger: TCCAATGTGGCAGTCTATTCCTCTATGTTTAAGTCACTTTAGGCAATTTGTAAACCCAAGTATGAAGCTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443406.1 |
||