Pregenerated sensors for LINC01364 (Homo sapiens)

Ensembl gene IDs: ENSG00000227290

Ensembl transcript IDs: ENST00000452509.2

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GCTCTTTGCACCACTCCAGGGCAGAGCCACAGTGATTCTGGTCCATaGGCGAAGTTAGTCACATGGAAAGGATGCATTGTGGTAGTTACA	+
Preference number: 5 (lower is better) Translates to: ALCTTPGQSHSDSGP*AKLVTWKGCIVVVT Trigger: TGTAACTACCACAATGCATCCTTTCCATGTGACTAACTTCGCTCATGGACCAGAATCACTGTGGCTCTGCCCTGGAGTGGTGCAAAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS TCA 90 bp	AAACAGAATGCGAGCTCTTTGCACCACTCCAGGGCAGAGCCACAGTaGTTCTGGTCCATGAGCGAAGTTAGTCACATGGAAAGGATGCAT	+
Preference number: 5 (lower is better) Translates to: KQNASSLHHSRAEPQ*FWSMSEVSHMERMH Trigger: ATGCATCCTTTCCATGTGACTAACTTCGCTCATGGACCAGAATCACTGTGGCTCTGCCCTGGAGTGGTGCAAAGAGCTCGCATTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS TCA 90 bp	GACCCACTTTACTCCATGTTGCTTTGGACAAGTAGAAGTCTCTTCTaGACTTGCTTATGGGCTTTGCAGGCAGGCAAGGTGAAGATCACA	+
Preference number: 5 (lower is better) Translates to: DPLYSMLLWTSRSLF*TCLWALQAGKVKIT Trigger: TGTGATCTTCACCTTGCCTGCCTGCAAAGCCCATAAGCAAGTTCAGAAGAGACTTCTACTTGTCCAAAGCAACATGGAGTAAAGTGGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS TCA 72 bp	TACTCCATGTTGCTTTGGACAAGTAGAAGTCTCTTCTaGACTTGCTTATGGGCTTTGCAGGCAGGCAAGGTG	+
Preference number: 6 (lower is better) Translates to: YSMLLWTSRSLF*TCLWALQAGKV Trigger: CACCTTGCCTGCCTGCAAAGCCCATAAGCAAGTTCAGAAGAGACTTCTACTTGTCCAAAGCAACATGGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS CAA 90 bp	TATGGCCCAGGCATCTCCTTCATGTGTTATCCCCAGCATACAACTTaGAGGAAGATGTTACCATTCCTACATTTGCAGTTGAGGAAGCAG	+
Preference number: 6 (lower is better) Translates to: YGPGISFMCYPQHTT*RKMLPFLHLQLRKQ Trigger: CTGCTTCCTCAACTGCAAATGTAGGAATGGTAACATCTTCCTCAAAGTTGTATGCTGGGGATAACACATGAAGGAGATGCCTGGGCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS TCA 72 bp	AAAACACTTGCTCAGAGTCACACCGCTAGAGTTGTCTaGACAGAGATGAATCTGACCCCAGAGCCTTATCAA	+
Preference number: 6 (lower is better) Translates to: KTLAQSHTARVV*TEMNLTPEPYQ Trigger: TTGATAAGGCTCTGGGGTCAGATTCATCTCTGTTCAGACAACTCTAGCGGTGTGACTCTGAGCAAGTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS CAA 72 bp	GGCATCTCCTTCATGTGTTATCCCCAGCATACAACTTaGAGGAAGATGTTACCATTCCTACATTTGCAGTTG	+
Preference number: 6 (lower is better) Translates to: GISFMCYPQHTT*RKMLPFLHLQL Trigger: CAACTGCAAATGTAGGAATGGTAACATCTTCCTCAAAGTTGTATGCTGGGGATAACACATGAAGGAGATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS CAA 90 bp	GATTTTCCAACCACATTTGAGAGTCCTCTACTGGATTTAAATAATTaGCTTTCCAAACAGAATGCGAGCTCTTTGCACCACTCCAGGGCA	+
Preference number: 6 (lower is better) Translates to: DFPTTFESPLLDLNN*LSKQNASSLHHSRA Trigger: TGCCCTGGAGTGGTGCAAAGAGCTCGCATTCTGTTTGGAAAGCAAATTATTTAAATCCAGTAGAGGACTCTCAAATGTGGTTGGAAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS CAA 90 bp	TTGCTTATGGGCTTTGCAGGCAGGCAAGGTGAAGATCACAGATATTaGCAAACTAGTTCAAGTCTTACTCAAACTCAGGAGGTAGATTTT	+
Preference number: 6 (lower is better) Translates to: LLMGFAGRQGEDHRY*QTSSSLTQTQEVDF Trigger: AAAATCTACCTCCTGAGTTTGAGTAAGACTTGAACTAGTTTGCAAATATCTGTGATCTTCACCTTGCCTGCCTGCAAAGCCCATAAGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452509.2
CDS TCA 72 bp	ACATGGAAAGGATGCATTGTGGTAGTTACATTTCAGTaGAGTACCTGCTCTGAAAACTCATTAACAGTCCTT	+
Preference number: 6 (lower is better) Translates to: TWKGCIVVVTFQ*STCSENSLTVL Trigger: AAGGACTGTTAATGAGTTTTCAGAGCAGGTACTTCACTGAAATGTAACTACCACAATGCATCCTTTCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452509.2

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