Pregenerated sensors for LINC01341 (Homo sapiens)
Ensembl gene IDs: ENSG00000227953Ensembl transcript IDs: ENST00000419361.2, ENST00000421003.5, ENST00000426089.1, ENST00000505748.6, ENST00000509202.1, ENST00000652908.1, ENST00000655681.1, ENST00000662358.1, ENST00000663201.1, ENST00000670093.1
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGCTGCAAATGCGCGGCCCGGAAGAACGTGCAGCCCGAGGCCTCTaGGACAGAATCTCCCCTCCTCGCCCGAACGCAGCCCCCAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GLQMRGPEERAARGL*DRISPPRPNAAPSS Trigger: ACTGCTGGGGGCTGCGTTCGGGCGAGGAGGGGAGATTCTGTCTCAGAGGCCTCGGGCTGCACGTTCTTCCGGGCCGCGCATTTGCAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
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| CDS GCA 90 bp | GGCTGGGGCCTGCTGTGGGCTGCAAATGCGCGGCCCGGAAGAACGTaGAGCCCGAGGCCTCTGAGACAGAATCTCCCCTCCTCGCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: GWGLLWAANARPGRT*SPRPLRQNLPSSPE Trigger: TTCGGGCGAGGAGGGGAGATTCTGTCTCAGAGGCCTCGGGCTGCACGTTCTTCCGGGCCGCGCATTTGCAGCCCACAGCAGGCCCCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
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| CDS CCA 90 bp | CTTCTGAAGCTTGCTTGCTGCCATCTTCCCACCACCCCATCCCGCTaGCCTGGGAGCGGGAGGACTCCAGTGTGGCCTTGGCCGGCTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLKLACCHLPTTPSR*PGSGRTPVWPWPAP Trigger: GGGAGCCGGCCAAGGCCACACTGGAGTCCTCCCGCTCCCAGGCCAGCGGGATGGGGTGGTGGGAAGATGGCAGCAAGCAAGCTTCAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 90 bp | GGTGCTTGGAGCCCTGACCCACCGGACTACAGAAAGCCCAGACTGTaGAGTGACCCCAAGGGCTCCCTCAGGAGGCCCCGCAGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GAWSPDPPDYRKPRL*SDPKGSLRRPRRSP Trigger: AGGGCTCCTGCGGGGCCTCCTGAGGGAGCCCTTGGGGTCACTCCACAGTCTGGGCTTTCTGTAGTCCGGTGGGTCAGGGCTCCAAGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 90 bp | CTGTCCCCATGCATCATGGGCCACAGCACACAGGAGGCCCCGAGATaGCACCTGCCATCCTCCGCAGCTGTAGACCTTCCCTCCTGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LSPCIMGHSTQEAPR*HLPSSAAVDLPSCA Trigger: TGCACAGGAGGGAAGGTCTACAGCTGCGGAGGATGGCAGGTGGCATCTCGGGGCCTCCTGTGTGCTGTGGCCCATGATGCATGGGGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 90 bp | AGCAGGGACACTGCCCAGGTCTCCCCGGGCCACCTACTCCAGGGCTaGTCTGAGAAAGCTGAGGGCAGGGCTTTCGTCCTCTGGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SRDTAQVSPGHLLQG*SEKAEGRAFVLWLK Trigger: TTTCAGCCAGAGGACGAAAGCCCTGCCCTCAGCTTTCTCAGACCAGCCCTGGAGTAGGTGGCCCGGGGAGACCTGGGCAGTGTCCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 90 bp | GCGGAGGGAGCGAGTGCAGACAAACTCGGTGAGCCCCCTCCTGACTaGTGGCCTCTCCCGTGTGCTGATCTGAGAGCAGCGATTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: AEGASADKLGEPPPD*WPLPCADLRAAISH Trigger: GTGTGAAATCGCTGCTCTCAGATCAGCACACGGGAGAGGCCAGCAGTCAGGAGGGGGCTCACCGAGTTTGTCTGCACTCGCTCCCTCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000419361.2 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 90 bp | GGGATGACTGCGCAACTGCCATCCGCCGGGGAGATGAGCCAAATGTaGACACAGCAAGCCGGCTCTGACCGAGAGCTTGCCAAGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GMTAQLPSAGEMSQM*TQQAGSDRELAKAL Trigger: CAGAGCCTTGGCAAGCTCTCGGTCAGAGCCGGCTTGCTGTGTGCACATTTGGCTCATCTCCCCGGCGGATGGCAGTTGCGCAGTCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS TCA 90 bp | TTCCTCTCCAGAGCCAGTGCTGACAGAGGCCCTGTCCTCACCCAGTaGGGAGGAAGACAGCGGCAGGCTGTTGTCCTGGATCTGCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: FLSRASADRGPVLTQ*GGRQRQAVVLDLLC Trigger: GCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCCTCCTCACTGGGTGAGGACAGGGCCTCTGTCAGCACTGGCTCTGGAGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS TCA 90 bp | ACCCCAGCGCTTTCTAGATGGAGATCACGGCCCTGTGGCTCGAGATaGCGACCCTTTCTGGGATCCTGTCGAGGTCGTCCGCTTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: TPALSRWRSRPCGSR*RPFLGSCRGRPLGL Trigger: GAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGCCACAGGGCCGTGATCTCCATCTAGAAAGCGCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509202.1 |
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| CDS GCA 90 bp | GCTAGGCCCTCAGCTGGTGTTCGTTCTGTTAATGAAGCCCTTGCCTaGTGTCTCCCAGCTCCCCGTGCTCCCCAAGGGCAGGGTCCTTCT | + |
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Preference number: 5 (lower is better) Translates to: ARPSAGVRSVNEALA*CLPAPRAPQGQGPS Trigger: AGAAGGACCCTGCCCTTGGGGAGCACGGGGAGCTGGGAGACAGCAGGCAAGGGCTTCATTAACAGAACGAACACCAGCTGAGGGCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 90 bp | TATATGCTGAAGCGGAAGAGCAAGGCGAGGAGGCCCTGCTTGACCTaGTCTGTTAGCGCGAATCTGCTGCCCTCTCAGGCCGCCGTCCGT | + |
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Preference number: 5 (lower is better) Translates to: YMLKRKSKARRPCLT*SVSANLLPSQAAVR Trigger: ACGGACGGCGGCCTGAGAGGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTTCAGCATATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CCA 90 bp | CAGCTCCTCTGCCACCATGGCTTGGGGACAACATGGCACCACTGCTaGAGGGACAGGCCTGCTCCTGACTCACTGTGTGGTCTTGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: QLLCHHGLGTTWHHC*RDRPAPDSLCGLGQ Trigger: TTGCCCAAGACCACACAGTGAGTCAGGAGCAGGCCTGTCCCTCCAGCAGTGGTGCCATGTTGTCCCCAAGCCATGGTGGCAGAGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 90 bp | CCACCTGCCATCCTCCGCAGCTGTAGACCTTCCCTCCTGTGCACATaGGAAAGGTCAGCCTACCTGCTCACGGAAACCGCCGTTTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: PPAILRSCRPSLLCT*ERSAYLLTETAVCW Trigger: CCAGCAAACGGCGGTTTCCGTGAGCAGGTAGGCTGACCTTTCTCATGTGCACAGGAGGGAAGGTCTACAGCTGCGGAGGATGGCAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 90 bp | AGAATTGTGCCTCCTCCATCTAGAGGTCTGCAGAGCCACACAGTCTaGAGGACAAGCAGGGACACTGCCCAGGTCTCCCCGGGCCACCTA | + |
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Preference number: 5 (lower is better) Translates to: RIVPPPSRGLQSHTV*RTSRDTAQVSPGHL Trigger: TAGGTGGCCCGGGGAGACCTGGGCAGTGTCCCTGCTTGTCCTGCAGACTGTGTGGCTCTGCAGACCTCTAGATGGAGGAGGCACAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CCA 90 bp | GAGGGCAGGGCTTTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTaGTTTGCTTCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: EGRAFVLWLKSRVQC*FASWAPTLLTETAV Trigger: AACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGCCCTGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CCA 90 bp | CTAGATGGAGATCACGGCCCTGTGGCTCGAGATGACGACCCTTTCTaGGATCCTGTCGAGGTCGTCCGCTTGGGCTCAGCTCACATCTGG | + |
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Preference number: 5 (lower is better) Translates to: LDGDHGPVARDDDPF*DPVEVVRLGSAHIW Trigger: CCAGATGTGAGCTGAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGCCACAGGGCCGTGATCTCCATCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS CCA 90 bp | CAGCTGGAGAGGGCGGCTGGAATCCCTCTGGAATCCCTCCTCCTGTaGCTTCAGGTTTGTTTCCTCTCCAGAGCCAGTGCTGACAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: QLERAAGIPLESLLL*LQVCFLSRASADRG Trigger: GCCTCTGTCAGCACTGGCTCTGGAGAGGAAACAAACCTGAAGCCACAGGAGGAGGGATTCCAGAGGGATTCCAGCCGCCCTCTCCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS TCA 90 bp | AGGGCTGGTCTGAGAAAGCTGAGGGCAGGGCTTTCGTCCTCTGGCTaGAATCTAGGGTGCAGTGCTGGTTTGCTTCCTGGGCTCCAACCC | + |
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Preference number: 5 (lower is better) Translates to: RAGLRKLRAGLSSSG*NLGCSAGLLPGLQP Trigger: GGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGCCCTGCCCTCAGCTTTCTCAGACCAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 90 bp | TTACCAGCGCTTTCTAGATGGAGATCACGGCCCTGTGGCTCGAGATaGCGACCCTTTCTGGGATCCTGTCGAGGTCGTCCGCTTGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPALSRWRSRPCGSR*RPFLGSCRGRPLGL Trigger: GAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGCCACAGGGCCGTGATCTCCATCTAGAAAGCGCTGGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000655681.1 ENST00000663201.1 |
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| CDS GCA 90 bp | CTCAGCCCCGAAGCCTTCCAACACTCTGAAGATCAGCGGGATGACTaGGCAACTGCCATCCGCCGGGGAGATGAGCCAAATGTGCACACA | + |
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Preference number: 5 (lower is better) Translates to: LSPEAFQHSEDQRDD*ATAIRRGDEPNVHT Trigger: TGTGTGCACATTTGGCTCATCTCCCCGGCGGATGGCAGTTGCGCAGTCATCCCGCTGATCTTCAGAGTGTTGGAAGGCTTCGGGGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS GCA 90 bp | TTGGAGACGTATATGCTGAAGCGGAAGAGCAAGGCGAGGAGGCCCTaGTTGACCTGCTCTGTTAGCGCGAATCTGCTGCCCTCTCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LETYMLKRKSKARRP*LTCSVSANLLPSQA Trigger: GGCCTGAGAGGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTTCAGCATATACGTCTCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CCA 90 bp | CTCCAGGGCTGGTCTGAGAAAGCTGAGGGCAGGGCTTTCGTCCTCTaGCTGAAATCTAGGGTGCAGTGCTGGTTTGCTTCCTGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LQGWSEKAEGRAFVL*LKSRVQCWFASWAP Trigger: TGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGCCCTGCCCTCAGCTTTCTCAGACCAGCCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 90 bp | CCTCTGACCTCACCTGTACGTGGGGTTTCCTTCGGAGTGGGGCAGTaGGGACCTGAGCAGGTTCGATTACGACTTCTTCCAGCTGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: PLTSPVRGVSFGVGQ*GPEQVRLRLLPAGE Trigger: CTCTCCAGCTGGAAGAAGTCGTAATCGAACCTGCTCAGGTCCTCACTGCCCCACTCCGAAGGAAACCCCACGTACAGGTGAGGTCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 90 bp | GCTGAGGGCAGGGCTTTCGTCCTCTGGCTGAAATCTAGGGTGCAGTaGTGGTTTGCTTCCTGGGCTCCAACCCTGGGAGAAAAGGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: AEGRAFVLWLKSRVQ*WFASWAPTLGEKGK Trigger: CTTTCCCTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGCCCTGCCCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 90 bp | TTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTGGTTTGCTTCCTaGGCTCCAACCCTGCTCACGGAAACCGCCGTTTGCTGGGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FVLWLKSRVQCWFAS*APTLLTETAVCWVS Trigger: AGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CCA 90 bp | GAGGGCAGGGCTTTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTaGTTTGCTTCCTGGGCTCCAACCCTGGGAGAAAAGGGAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: EGRAFVLWLKSRVQC*FASWAPTLGEKGKL Trigger: CAGCTTTCCCTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGCCCTGCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS TCA 90 bp | ATCCGCCGGGGAGATGAGCCAAATGTGCACACAGCAAGCCGGCTCTaGCCGAGAGCTTGCCAAGGCTCTGAAGGTGTTCTACCAAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: IRRGDEPNVHTASRL*PRACQGSEGVLPKH Trigger: ATGCTTTGGTAGAACACCTTCAGAGCCTTGGCAAGCTCTCGGTCAGAGCCGGCTTGCTGTGTGCACATTTGGCTCATCTCCCCGGCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS GCA 90 bp | TCCTCGTCCAGCATTAGAGAATTGTGCCTCCTCCATCTAGAGGTCTaGAGAGCCACACAGTCTGCAGGACAAGCAGGGACACTGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSSSIRELCLLHLEV*RATQSAGQAGTLPR Trigger: CCTGGGCAGTGTCCCTGCTTGTCCTGCAGACTGTGTGGCTCTGCAGACCTCTAGATGGAGGAGGCACAATTCTCTAATGCTGGACGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 90 bp | CTGCACCGAGCTGAGCTGCTCTCAGCTGGGCCTCATGGTCACAGGTaGAGGCCACATCCTGGTAGACACCAAGAAAATTTCCACTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: LHRAELLSAGPHGHR*RPHPGRHQENFHCE Trigger: TTCACAGTGGAAATTTTCTTGGTGTCTACCAGGATGTGGCCTTCACCTGTGACCATGAGGCCCAGCTGAGAGCAGCTCAGCTCGGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421003.5 ENST00000663201.1 |
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| CDS GCA 90 bp | GGGATGTTTCTTTCTTTGACTGTGTCTCTCCCCATTACAGAAGGCTaGACCGAGCTGAGCTGCTCTCAGCTGGGCCTCATGGTCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: GMFLSLTVSLPITEG*TELSCSQLGLMVTG Trigger: ACCTGTGACCATGAGGCCCAGCTGAGAGCAGCTCAGCTCGGTGCAGCCTTCTGTAATGGGGAGAGACACAGTCAAAGAAAGAAACATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS TCA 90 bp | TTTCCAGAACACGTCCTTAGTCCAACGCACAGGTGCGTAAATGTCTaGACTCCAGTGATGAGGCCGCAACCTTTCCCACAGGATCCCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPEHVLSPTHRCVNV*TPVMRPQPFPQDPW Trigger: CCAGGGATCCTGTGGGAAAGGTTGCGGCCTCATCACTGGAGTTCAGACATTTACGCACCTGTGCGTTGGACTAAGGACGTGTTCTGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS TCA 90 bp | AAGATGGTTCAAAGGGGTAGAGAAGAGAGTGGGGTACCCAGCAAATaGGAGAAGAATGCTGAGCTGGAGAAGCCAGTTAGTGGCCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: KMVQRGREESGVPSK*EKNAELEKPVSGLR Trigger: CCGGAGGCCACTAACTGGCTTCTCCAGCTCAGCATTCTTCTCTCATTTGCTGGGTACCCCACTCTCTTCTCTACCCCTTTGAACCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
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| CDS GCA 90 bp | TTCACAAATGCCGACGGTAAAGTGACGGTCACTCCACATAGCAAATaGAAGGTTGCCGTTAACGGGGTGCCCATCACCACCAGGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: FTNADGKVTVTPHSK*KVAVNGVPITTRTK Trigger: CTTTGTCCTGGTGGTGATGGGCACCCCGTTAACGGCAACCTTGCATTTGCTATGTGGAGTGACCGTCACTTTACCGTCGGCATTTGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CCA 90 bp | TTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTGGTTTGCTTCCTaGGCTCCAACCCTGGGAGAAAAGGGAAAGCTGGTTTCTAGATTC | + |
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Preference number: 5 (lower is better) Translates to: FVLWLKSRVQCWFAS*APTLGEKGKLVSRF Trigger: GAATCTAGAAACCAGCTTTCCCTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 90 bp | GGGCAGCTTTTCAGACTCAGACGGCACCAACCTCCGGTAAGGAACTaGAATCCTGGGAGCACACAGAATTTCTTTCCATCCAATTTAGAC | + |
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Preference number: 5 (lower is better) Translates to: GQLFRLRRHQPPVRN*NPGSTQNFFPSNLD Trigger: GTCTAAATTGGATGGAAAGAAATTCTGTGTGCTCCCAGGATTCCAGTTCCTTACCGGAGGTTGGTGCCGTCTGAGTCTGAAAAGCTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS GCA 90 bp | TGGTTTGCTTCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTTTaGTGGGTGTCTTTGACTCTCATCTTCTTAGAATTTCAGATAAAC | + |
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Preference number: 5 (lower is better) Translates to: WFASWAPTLLTETAV*WVSLTLIFLEFQIN Trigger: GTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CCA 90 bp | TTTGCTTCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTTTGCTaGGTGTCTTTGACTCTCATCTTCTTAGAATTTCAGATAAACACG | + |
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Preference number: 5 (lower is better) Translates to: FASWAPTLLTETAVC*VSLTLIFLEFQINT Trigger: CGTGTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 90 bp | GAATTTCAGATAAACACGCTTCCTTCACAAATGCCGACGGTAAAGTaGCGGTCACTCCACATAGCAAATGCAAGGTTGCCGTTAACGGGG | + |
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Preference number: 5 (lower is better) Translates to: EFQINTLPSQMPTVK*RSLHIANARLPLTG Trigger: CCCCGTTAACGGCAACCTTGCATTTGCTATGTGGAGTGACCGTCACTTTACCGTCGGCATTTGTGAAGGAAGCGTGTTTATCTGAAATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 90 bp | TTGATTCCTTTCAGGTTCATGTGGCACCGGTCAGGCTGCCTCAAATaGTATCACGATTCAAGGTTTGGGGTGAGTTTCCATGATCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: LIPFRFMWHRSGCLK*YHDSRFGVSFHDQC Trigger: ACACTGATCATGGAAACTCACCCCAAACCTTGAATCGTGATAGCATTTGAGGCAGCCTGACCGGTGCCACATGAACCTGAAAGGAATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 |
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| CDS CCA 90 bp | TTCTTCCAGCTGGAGAGGGCGGCTCTGTGTTTCCAGGTGTGGATATaGTCAAAAGCCAAGTTCATCAATAGGAAATTCCTAATGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FFQLERAALCFQVWI*SKAKFINRKFLMQE Trigger: TTCCTGCATTAGGAATTTCCTATTGATGAACTTGGCTTTTGACCATATCCACACCTGGAAACACAGAGCCGCCCTCTCCAGCTGGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655681.1 |
||
| CDS GCA 90 bp | AATTATATCTTGATTCCTTTCAGGTTCATGTGGCACCGGTCAGGCTaGCTCAAATGCTATCACGATTCAAGGTTTGGGGTGAGTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NYILIPFRFMWHRSG*LKCYHDSRFGVSFH Trigger: ATGGAAACTCACCCCAAACCTTGAATCGTGATAGCATTTGAGGCAGCCTGACCGGTGCCACATGAACCTGAAAGGAATCAAGATATAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 |
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| CDS CCA 90 bp | GATTTCACACTGTGTCTCTCTGCTCTGTGTTTCCAGGTGTGGATATaGTCAAAAGCCAAGTTCATCAATAGGAAATTCCTAATGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DFTLCLSALCFQVWI*SKAKFINRKFLMQE Trigger: TTCCTGCATTAGGAATTTCCTATTGATGAACTTGGCTTTTGACCATATCCACACCTGGAAACACAGAGCAGAGAGACACAGTGTGAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663201.1 |
||
| CDS GCA 90 bp | TGGATGGATCCAAACTGGTGCCTGATAAATGCTGATGCAGTAGAATaGCACCAAAATAAATATAGAGATGCCCAGAGAAAGAGATACATA | + |
|
Preference number: 5 (lower is better) Translates to: WMDPNWCLINADAVE*HQNKYRDAQRKRYI Trigger: TATGTATCTCTTTCTCTGGGCATCTCTATATTTATTTTGGTGGCATTCTACTGCATCAGCATTTATCAGGCACCAGTTTGGATCCATCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421003.5 ENST00000663201.1 |
||
| CDS CCA 90 bp | TTTATTTTCAAAATAAATTATATCTTGATTCCTTTCAGGTTCATGTaGCACCGGTCAGGCTGCCTCAAATGCTATCACGATTCAAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FIFKINYILIPFRFM*HRSGCLKCYHDSRF Trigger: AAACCTTGAATCGTGATAGCATTTGAGGCAGCCTGACCGGTGCCACATGAACCTGAAAGGAATCAAGATATAATTTATTTTGAAAATAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 |
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| CDS GCA 72 bp | CAGAGGGGCCGGCTGGGGCCTGCTGTGGGCTGCAAATaGGCGGCCCGGAAGAACGTGCAGCCCGAGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRGRLGPAVGCK*AARKNVQPEAS Trigger: AGAGGCCTCGGGCTGCACGTTCTTCCGGGCCGCGCATTTGCAGCCCACAGCAGGCCCCAGCCGGCCCCTCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
||
| CDS TCA 72 bp | ATGCGCGGCCCGGAAGAACGTGCAGCCCGAGGCCTCTaGGACAGAATCTCCCCTCCTCGCCCGAACGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: MRGPEERAARGL*DRISPPRPNAA Trigger: GGCTGCGTTCGGGCGAGGAGGGGAGATTCTGTCTCAGAGGCCTCGGGCTGCACGTTCTTCCGGGCCGCGCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
||
| CDS GCA 72 bp | CCGTGCTCCCCAAGGGCAGGGTCCTTCTGCGCCCGCTaGTGTCCCCATGCATCATGGGCCACAGCACACAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCSPRAGSFCAR*CPHASWATAHR Trigger: CCTGTGTGCTGTGGCCCATGATGCATGGGGACAGCAGCGGGCGCAGAAGGACCCTGCCCTTGGGGAGCACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | GGGTCCTTCTGCGCCCGCTGCTGTCCCCATGCATCATaGGCCACAGCACACAGGAGGCCCCGAGATGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: GSFCARCCPHAS*ATAHRRPRDAT Trigger: GGTGGCATCTCGGGGCCTCCTGTGTGCTGTGGCCCATGATGCATGGGGACAGCAGCGGGCGCAGAAGGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
||
| CDS TCA 72 bp | GCTAAGGCAGGGAGCCAGTCATTCAGGACACACAGATaGCATCGGTGCAGGGGAGCAGGGCGGGGAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AKAGSQSFRTHR*HRCRGAGRGEG Trigger: CCCCTCTCCCCGCCCTGCTCCCCTGCACCGATGTCATCTGTGTGTCCTGAATGACTGGCTCCCTGCCTTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 72 bp | GCGAGTGCAGACAAACTCGGTGAGCCCCCTCCTGACTaGTGGCCTCTCCCGTGTGCTGATCTGAGAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ASADKLGEPPPD*WPLPCADLRAA Trigger: CGCTGCTCTCAGATCAGCACACGGGAGAGGCCAGCAGTCAGGAGGGGGCTCACCGAGTTTGTCTGCACTCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000419361.2 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 72 bp | GCGCAACTGCCATCCGCCGGGGAGATGAGCCAAATGTaGACACAGCAAGCCGGCTCTGACCGAGAGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AQLPSAGEMSQM*TQQAGSDRELA Trigger: GGCAAGCTCTCGGTCAGAGCCGGCTTGCTGTGTGCACATTTGGCTCATCTCCCCGGCGGATGGCAGTTGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS GCA 72 bp | GCACCATCACCTACATCCTTCAGACAGATCACCCCCTaGCCCCGTACGAAAGCCCACGGGCCGTCGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APSPTSFRQITP*PRTKAHGPSWL Trigger: CAGCCACGACGGCCCGTGGGCTTTCGTACGGGGGCAGGGGGTGATCTGTCTGAAGGATGTAGGTGATGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | CCCAGTGAGGAGGAAGACAGCGGCAGGCTGTTGTCCTaGATCTGCTGTGCACTGGGTGTGGACCCCAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSEEEDSGRLLS*ICCALGVDPSA Trigger: AGCGCTGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCCTCCTCACTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509202.1 |
||
| CDS CAA 72 bp | GACGACCCTTTCTGGGATCCTGTCGAGGTCGTCCGCTaGGGCTCAGCTCACATCTGGCTCCAGTCGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DDPFWDPVEVVR*GSAHIWLQSLA Trigger: GGCCAGCGACTGGAGCCAGATGTGAGCTGAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS CAA 90 bp | AGGCTCGTTAAGAGTCGCCTCCTGAGCGTCTCTTCTGAAGCTTGCTaGCTGCCATCTTCCCACCACCCCATCCCGCTGGCCTGGGAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: RLVKSRLLSVSSEAC*LPSSHHPIPLAWER Trigger: CCGCTCCCAGGCCAGCGGGATGGGGTGGTGGGAAGATGGCAGCAAGCAAGCTTCAGAAGAGACGCTCAGGAGGCGACTCTTAACGAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 72 bp | AGACGTGGCAGGATGGGGCGTTCACACCAGCTCCTCTaGCACCATGGCTTGGGGACAACATGGCACCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRMGRSHQLL*HHGLGTTWHHC Trigger: GCAGTGGTGCCATGTTGTCCCCAAGCCATGGTGGCAGAGGAGCTGGTGTGAACGCCCCATCCTGCCACGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 72 bp | AAGCGGAAGAGCAAGGCGAGGAGGCCCTGCTTGACCTaGTCTGTTAGCGCGAATCTGCTGCCCTCTCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KRKSKARRPCLT*SVSANLLPSQA Trigger: GGCCTGAGAGGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CCA 72 bp | ACGACCCTTTCTGGGATCCTGTCGAGGTCGTCCGCTTaGGCTCAGCTCACATCTGGCTCCAGTCGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TTLSGILSRSSA*AQLTSGSSRWP Trigger: AGGCCAGCGACTGGAGCCAGATGTGAGCTGAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS CCA 72 bp | GATCACGGCCCTGTGGCTCGAGATGACGACCCTTTCTaGGATCCTGTCGAGGTCGTCCGCTTGGGCTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: DHGPVARDDDPF*DPVEVVRLGSA Trigger: AGCTGAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGCCACAGGGCCGTGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS CCA 72 bp | CCCAGTGAGGAGGAAGACAGCGGCAGGCTGTTGTCCTaGATCTGCTGTGCACTGGGTGTGGACCCCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PSEEEDSGRLLS*ICCALGVDPSV Trigger: CACAGAGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCCTCCTCACTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS CAA 90 bp | GCTCGAGATGACGACCCTTTCTGGGATCCTGTCGAGGTCGTCCGCTaGGGCTCAGCTCACATCTGGCTCCAGTCGCTGGCCTACTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: ARDDDPFWDPVEVVR*GSAHIWLQSLAYCM Trigger: CATGCAGTAGGCCAGCGACTGGAGCCAGATGTGAGCTGAGCCCAAGCGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS CAA 90 bp | GAGGCCCTGTCCTCACCCAGTGAGGAGGAAGACAGCGGCAGGCTGTaGTCCTGGATCTGCTGTGCACTGGGTGTGGACCCCTCTGTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EALSSPSEEEDSGRL*SWICCALGVDPSVF Trigger: AAACACAGAGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCCTCCTCACTGGGTGAGGACAGGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS CAA 90 bp | GAGACGTATATGCTGAAGCGGAAGAGCAAGGCGAGGAGGCCCTGCTaGACCTGCTCTGTTAGCGCGAATCTGCTGCCCTCTCAGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ETYMLKRKSKARRPC*TCSVSANLLPSQAA Trigger: GGCGGCCTGAGAGGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTTCAGCATATACGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CCA 72 bp | GTGGGGTACCCAGCAAATGAGAGAAGAATGCTGAGCTaGAGAAGCCAGTTAGTGGCCTCCGGCCGCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VGYPANERRMLS*RSQLVASGRPQ Trigger: CTGGGGGCGGCCGGAGGCCACTAACTGGCTTCTCCAGCTCAGCATTCTTCTCTCATTTGCTGGGTACCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000426089.1 ENST00000670093.1 |
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| CDS TCA 72 bp | GCTGAGCTGCTCTCAGCTGGGCCTCATGGTCACAGGTaGAGGCCACATCCTTTTTCCACCTCAGCCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AELLSAGPHGHR*RPHPFSTSAPK Trigger: CTTCGGGGCTGAGGTGGAAAAAGGATGTGGCCTTCACCTGTGACCATGAGGCCCAGCTGAGAGCAGCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS GCA 72 bp | TCTCTCCCCATTACAGAAGGCTGCACCGAGCTGAGCTaGTCTCAGCTGGGCCTCATGGTCACAGGTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPITEGCTELS*SQLGLMVTGEG Trigger: GCCTTCACCTGTGACCATGAGGCCCAGCTGAGAGCAGCTCAGCTCGGTGCAGCCTTCTGTAATGGGGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS GCA 72 bp | GAGGAGGAAGACAGCGGCAGGCTGTTGTCCTGGATCTaGTGTGCACTGGGTGTGGACCCCTCTGTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EEEDSGRLLSWI*CALGVDPSVFP Trigger: TGGAAACACAGAGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS GCA 72 bp | TCAGCTGGTGTTCGTTCTGTTAATGAAGCCCTTGCCTaGTGTCTCCCAGCTCCCCGTGCTCCCCAAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SAGVRSVNEALA*CLPAPRAPQGQ Trigger: CTGCCCTTGGGGAGCACGGGGAGCTGGGAGACAGCAGGCAAGGGCTTCATTAACAGAACGAACACCAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 72 bp | GGAAGACAGCGGCAGGCTGTTGTCCTGGATCTGCTGTaGACTGGGTGTGGACCCCAGCGCTTTCTAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRQRQAVVLDLL*TGCGPQRFLDG Trigger: TCCATCTAGAAAGCGCTGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509202.1 |
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| CDS CAA 72 bp | ATGCTGAAGCGGAAGAGCAAGGCGAGGAGGCCCTGCTaGACCTGCTCTGTTAGCGCGAATCTGCTGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLKRKSKARRPC*TCSVSANLLPS Trigger: AGAGGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTTCAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CAA 90 bp | ACCACTGCTGGAGGGACAGGCCTGCTCCTGACTCACTGTGTGGTCTaGGGCAAGTCACTTCACTCCTCTGACCTCACCTGTACGTGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TTAGGTGLLLTHCVV*GKSLHSSDLTCTWG Trigger: ACCCCACGTACAGGTGAGGTCAGAGGAGTGAAGTGACTTGCCCAAGACCACACAGTGAGTCAGGAGCAGGCCTGTCCCTCCAGCAGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 72 bp | CTTTCTAGATGGAGATCACGGCCCTGTGGCTCGAGATaGCGACCCTTTCTGGGATCCTGTCGAGGTCGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSRWRSRPCGSR*RPFLGSCRGRP Trigger: CGGACGACCTCGACAGGATCCCAGAAAGGGTCGTCATCTCGAGCCACAGGGCCGTGATCTCCATCTAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS TCA 72 bp | GTGGCTTCAGGTTTGTTTCCTCTCCAGAGCCAGTGCTaGCAGAGGCCCTGTCCTCACCCAGTGAGGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VASGLFPLQSQC*QRPCPHPVRRK Trigger: CTTCCTCCTCACTGGGTGAGGACAGGGCCTCTGTCAGCACTGGCTCTGGAGAGGAAACAAACCTGAAGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421003.5 |
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| CDS TCA 72 bp | ATCCTCCGCAGCTGTAGACCTTCCCTCCTGTGCACATaGGAAAGGTCAGCCTACCTGCTCACGGAAACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: ILRSCRPSLLCT*ERSAYLLTETA Trigger: GGCGGTTTCCGTGAGCAGGTAGGCTGACCTTTCTCATGTGCACAGGAGGGAAGGTCTACAGCTGCGGAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 72 bp | TATATGCTGAAGCGGAAGAGCAAGGCGAGGAGGCCCTaGTTGACCTGCTCTGTTAGCGCGAATCTGCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: YMLKRKSKARRP*LTCSVSANLLP Trigger: GGGCAGCAGATTCGCGCTAACAGAGCAGGTCAAGCAGGGCCTCCTCGCCTTGCTCTTCCGCTTCAGCATATA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CCA 72 bp | ACAGCGGCAGGCTGTTGTCCTGGATCTGCTGTGCACTaGGTGTGGACCCCAGCGCTTTCTAGATGGAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: TAAGCCPGSAVH*VWTPALSRWRS Trigger: TGATCTCCATCTAGAAAGCGCTGGGGTCCACACCCAGTGCACAGCAGATCCAGGACAACAGCCTGCCGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000509202.1 |
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| CDS GCA 72 bp | GAAGCCTTCCAACACTCTGAAGATCAGCGGGATGACTaGGCAACTGCCATCCGCCGGGGAGATGAGCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: EAFQHSEDQRDD*ATAIRRGDEPN Trigger: ATTTGGCTCATCTCCCCGGCGGATGGCAGTTGCGCAGTCATCCCGCTGATCTTCAGAGTGTTGGAAGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS CCA 72 bp | GCTTTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTaGTTTGCTTCCTGGGCTCCAACCCTGCTCACGGAA | + |
|
Preference number: 6 (lower is better) Translates to: AFVLWLKSRVQC*FASWAPTLLTE Trigger: TTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 72 bp | GGAGATGAGCCAAATGTGCACACAGCAAGCCGGCTCTaGCCGAGAGCTTGCCAAGGCTCTGAAGGTGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: GDEPNVHTASRL*PRACQGSEGVL Trigger: TAGAACACCTTCAGAGCCTTGGCAAGCTCTCGGTCAGAGCCGGCTTGCTGTGTGCACATTTGGCTCATCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 |
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| CDS CCA 72 bp | GCTTTCGTCCTCTGGCTGAAATCTAGGGTGCAGTGCTaGTTTGCTTCCTGGGCTCCAACCCTGGGAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: AFVLWLKSRVQC*FASWAPTLGEK Trigger: CTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCAGAGGACGAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
||
| CDS TCA 72 bp | GCTGAGCTGCTCTCAGCTGGGCCTCATGGTCACAGGTaGAGGCCACATCCTGGTAGACACCAAGAAAATTTC | + |
|
Preference number: 6 (lower is better) Translates to: AELLSAGPHGHR*RPHPGRHQENF Trigger: GAAATTTTCTTGGTGTCTACCAGGATGTGGCCTTCACCTGTGACCATGAGGCCCAGCTGAGAGCAGCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421003.5 ENST00000663201.1 |
||
| CDS TCA 72 bp | CACGTCCTTAGTCCAACGCACAGGTGCGTAAATGTCTaGACTCCAGTGATGAGGCCGCAACCTTTCCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: HVLSPTHRCVNV*TPVMRPQPFPQ Trigger: CTGTGGGAAAGGTTGCGGCCTCATCACTGGAGTTCAGACATTTACGCACCTGTGCGTTGGACTAAGGACGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
||
| CDS CCA 72 bp | GGGTGCAGTGCTGGTTTGCTTCCTGGGCTCCAACCCTaGGAGAAAAGGGAAAGCTGGTTTCTAGATTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCSAGLLPGLQP*EKRESWFLDSV Trigger: CACAGAATCTAGAAACCAGCTTTCCCTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
||
| CDS CCA 72 bp | TGGCTGAAATCTAGGGTGCAGTGCTGGTTTGCTTCCTaGGCTCCAACCCTGGGAGAAAAGGGAAAGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WLKSRVQCWFAS*APTLGEKGKLV Trigger: AACCAGCTTTCCCTTTTCTCCCAGGGTTGGAGCCCAGGAAGCAAACCAGCACTGCACCCTAGATTTCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | GCCTACTGCATGAAGCTGACACTGGAGCTGGGCGACTaGGATGTTTCTTTCTTTGACTGTGTCTCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AYCMKLTLELGD*DVSFFDCVSPH Trigger: ATGGGGAGAGACACAGTCAAAGAAAGAAACATCCCAGTCGCCCAGCTCCAGTGTCAGCTTCATGCAGTAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000505748.6 ENST00000509202.1 ENST00000655681.1 ENST00000663201.1 |
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| CDS TCA 72 bp | AGGAGACGGAACCGCTCAGGAACATTAACAGAGCCCTaGGAGAGGAGAACGTGCTTCTCAAAGCATCACTTG | + |
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Preference number: 6 (lower is better) Translates to: RRRNRSGTLTEP*ERRTCFSKHHL Trigger: CAAGTGATGCTTTGAGAAGCACGTTCTCCTCTCTCAGGGCTCTGTTAATGTTCCTGAGCGGTTCCGTCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421003.5 ENST00000663201.1 |
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| CDS TCA 72 bp | GACACCCCGACGTCCAGCCCCAAATCCTATAAGGTCTaGATTTATACGGCGAGGGCGCAGAAACAGATCAAA | + |
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Preference number: 6 (lower is better) Translates to: DTPTSSPKSYKV*IYTARAQKQIK Trigger: TTTGATCTGTTTCTGCGCCCTCGCCGTATAAATTCAGACCTTATAGGATTTGGGGCTGGACGTCGGGGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000426089.1 ENST00000652908.1 ENST00000655681.1 |
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| CDS GCA 72 bp | TCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTTTaGTGGGTGTCTTTGACTCTCATCTTCTTAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: SWAPTLLTETAV*WVSLTLIFLEF Trigger: AAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CAA 72 bp | TTCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTTaGCTGGGTGTCTTTGACTCTCATCTTCTTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: FLGSNPAHGNRR*LGVFDSHLLRI Trigger: AATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 72 bp | TTCAGGTTCATGTGGCACCGGTCAGGCTGCCTCAAATaGTATCACGATTCAAGGTTTGGGGTGAGTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FRFMWHRSGCLK*YHDSRFGVSFH Trigger: ATGGAAACTCACCCCAAACCTTGAATCGTGATAGCATTTGAGGCAGCCTGACCGGTGCCACATGAACCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 |
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| CDS GCA 72 bp | TTGATTCCTTTCAGGTTCATGTGGCACCGGTCAGGCTaGCTCAAATGCTATCACGATTCAAGGTTTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LIPFRFMWHRSG*LKCYHDSRFGV Trigger: CACCCCAAACCTTGAATCGTGATAGCATTTGAGGCAGCCTGACCGGTGCCACATGAACCTGAAAGGAATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000652908.1 ENST00000662358.1 ENST00000663201.1 |
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| CDS CAA 90 bp | TGGGCTCCAACCCTGCTCACGGAAACCGCCGTTTGCTGGGTGTCTTaGACTCTCATCTTCTTAGAATTTCAGATAAACACGCTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: WAPTLLTETAVCWVS*TLIFLEFQINTLPS Trigger: TGAAGGAAGCGTGTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CAA 90 bp | CTGGTTTGCTTCCTGGGCTCCAACCCTGCTCACGGAAACCGCCGTTaGCTGGGTGTCTTTGACTCTCATCTTCTTAGAATTTCAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: LVCFLGSNPAHGNRR*LGVFDSHLLRISDK Trigger: TTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGTTGGAGCCCAGGAAGCAAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS TCA 72 bp | ATAAACACGCTTCCTTCACAAATGCCGACGGTAAAGTaGCGGTCACTCCACATAGCAAATGCAAGGTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: INTLPSQMPTVK*RSLHIANARLP Trigger: CGGCAACCTTGCATTTGCTATGTGGAGTGACCGTCACTTTACCGTCGGCATTTGTGAAGGAAGCGTGTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000419361.2 ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS GCA 72 bp | GAAAGGTCAGCCTACCTGCTCACGGAAACCGCCGTTTaGTGGGTGTCTTTGACTCTCATCTTCTTAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: ERSAYLLTETAV*WVSLTLIFLEF Trigger: AAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGTAGGCTGACCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | CAGACGGCACCAACCTCCGGTAAGGAACTGGAATCCTaGGAGCACACAGAATTTCTTTCCATCCAATTTAGA | + |
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Preference number: 6 (lower is better) Translates to: QTAPTSGKELES*EHTEFLSIQFR Trigger: TCTAAATTGGATGGAAAGAAATTCTGTGTGCTCCCAGGATTCCAGTTCCTTACCGGAGGTTGGTGCCGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CAA 72 bp | AGAAAGGTCAGCCTACCTGCTCACGGAAACCGCCGTTaGCTGGGTGTCTTTGACTCTCATCTTCTTAGAATT | + |
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Preference number: 6 (lower is better) Translates to: RKVSLPAHGNRR*LGVFDSHLLRI Trigger: AATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGTAGGCTGACCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CAA 90 bp | AGGTCAGCCTACCTGCTCACGGAAACCGCCGTTTGCTGGGTGTCTTaGACTCTCATCTTCTTAGAATTTCAGATAAACACGCTTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RSAYLLTETAVCWVS*TLIFLEFQINTLPS Trigger: TGAAGGAAGCGTGTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGTAGGCTGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CAA 90 bp | GTGCACATGAGAAAGGTCAGCCTACCTGCTCACGGAAACCGCCGTTaGCTGGGTGTCTTTGACTCTCATCTTCTTAGAATTTCAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: VHMRKVSLPAHGNRR*LGVFDSHLLRISDK Trigger: TTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGTAGGCTGACCTTTCTCATGTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | CTGGAGAGGGCGGCTCTGTGTTTCCAGGTGTGGATATaGTCAAAAGCCAAGTTCATCAATAGGAAATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LERAALCFQVWI*SKAKFINRKFL Trigger: TAGGAATTTCCTATTGATGAACTTGGCTTTTGACCATATCCACACCTGGAAACACAGAGCCGCCCTCTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655681.1 |
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| CDS CAA 72 bp | ACCCTGCTCACGGAAACCGCCGTTTGCTGGGTGTCTTaGACTCTCATCTTCTTAGAATTTCAGATAAACACG | + |
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Preference number: 6 (lower is better) Translates to: TLLTETAVCWVS*TLIFLEFQINT Trigger: CGTGTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419361.2 ENST00000662358.1 ENST00000663201.1 ENST00000670093.1 |
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| CDS CAA 72 bp | TACCTGCTCACGGAAACCGCCGTTTGCTGGGTGTCTTaGACTCTCATCTTCTTAGAATTTCAGATAAACACG | + |
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Preference number: 6 (lower is better) Translates to: YLLTETAVCWVS*TLIFLEFQINT Trigger: CGTGTTTATCTGAAATTCTAAGAAGATGAGAGTCAAAGACACCCAGCAAACGGCGGTTTCCGTGAGCAGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000421003.5 ENST00000426089.1 ENST00000505748.6 ENST00000652908.1 ENST00000655681.1 |
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| CDS CCA 72 bp | CTGTGTCTCTCTGCTCTGTGTTTCCAGGTGTGGATATaGTCAAAAGCCAAGTTCATCAATAGGAAATTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LCLSALCFQVWI*SKAKFINRKFL Trigger: TAGGAATTTCCTATTGATGAACTTGGCTTTTGACCATATCCACACCTGGAAACACAGAGCAGAGAGACACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663201.1 |
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