Pregenerated sensors for LINC01332 (Homo sapiens)

Ensembl gene IDs: ENSG00000250446

Ensembl transcript IDs: ENST00000506612.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGTGCCCTCCTGACTGCTCCACTGCCAGGACTAAGGCTAAGGCCATaGCTTTGCAGCAATGACTTCACTATGCATTCAGCACAGATCTCT	+
Preference number: 5 (lower is better) Translates to: GALLTAPLPGLRLRP*LCSNDFTMHSAQIS Trigger: AGAGATCTGTGCTGAATGCATAGTGAAGTCATTGCTGCAAAGCCATGGCCTTAGCCTTAGTCCTGGCAGTGGAGCAGTCAGGAGGGCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS GCA 90 bp	TCTCCTTTAAGACCCAATGAACATGACTTCAGGTGCCCTCCTGACTaGTCCACTGCCAGGACTAAGGCTAAGGCCATGGCTTTGCAGCAA	+
Preference number: 5 (lower is better) Translates to: SPLRPNEHDFRCPPD*STARTKAKAMALQQ Trigger: TTGCTGCAAAGCCATGGCCTTAGCCTTAGTCCTGGCAGTGGAGCAGTCAGGAGGGCACCTGAAGTCATGTTCATTGGGTCTTAAAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS GCA 90 bp	CTCCTGACTGCTCCACTGCCAGGACTAAGGCTAAGGCCATGGCTTTaGAGCAATGACTTCACTATGCATTCAGCACAGATCTCTGAAACA	+
Preference number: 5 (lower is better) Translates to: LLTAPLPGLRLRPWL*SNDFTMHSAQISET Trigger: TGTTTCAGAGATCTGTGCTGAATGCATAGTGAAGTCATTGCTGCAAAGCCATGGCCTTAGCCTTAGTCCTGGCAGTGGAGCAGTCAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS TCA 90 bp	ACTCAAGTTTTGTTTGTCTCCCCCAGGGTAGCAAACGCAGTCAGATaGTACTTCCTGACAGCATCCAAGAGCAAGTCTCACCACCACATT	+
Preference number: 5 (lower is better) Translates to: TQVLFVSPRVANAVR*YFLTASKSKSHHHI Trigger: AATGTGGTGGTGAGACTTGCTCTTGGATGCTGTCAGGAAGTATCATCTGACTGCGTTTGCTACCCTGGGGGAGACAAACAAAACTTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS GCA 72 bp	AGACCCAATGAACATGACTTCAGGTGCCCTCCTGACTaGTCCACTGCCAGGACTAAGGCTAAGGCCATGGCT	+
Preference number: 6 (lower is better) Translates to: RPNEHDFRCPPD*STARTKAKAMA Trigger: AGCCATGGCCTTAGCCTTAGTCCTGGCAGTGGAGCAGTCAGGAGGGCACCTGAAGTCATGTTCATTGGGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS CCA 72 bp	CTGACTGCTCCACTGCCAGGACTAAGGCTAAGGCCATaGCTTTGCAGCAATGACTTCACTATGCATTCAGCA	+
Preference number: 6 (lower is better) Translates to: LTAPLPGLRLRP*LCSNDFTMHSA Trigger: TGCTGAATGCATAGTGAAGTCATTGCTGCAAAGCCATGGCCTTAGCCTTAGTCCTGGCAGTGGAGCAGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506612.1
CDS TCA 72 bp	TTGTTTGTCTCCCCCAGGGTAGCAAACGCAGTCAGATaGTACTTCCTGACAGCATCCAAGAGCAAGTCTCAC	+
Preference number: 6 (lower is better) Translates to: LFVSPRVANAVR*YFLTASKSKSH Trigger: GTGAGACTTGCTCTTGGATGCTGTCAGGAAGTATCATCTGACTGCGTTTGCTACCCTGGGGGAGACAAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506612.1

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