Pregenerated sensors for LINC01323 (Homo sapiens)
Ensembl gene IDs: ENSG00000241636Ensembl transcript IDs: ENST00000486767.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATTCAGTTTCGGTCTTGTGTTCTTTGTCTTCTTCCAATCTGGATTaGTGGAATATGGAGGTTCTTCACTACAGCGTCGTATCTCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSVSVLCSLSSSNLD*WNMEVLHYSVVSHV Trigger: GACATGAGATACGACGCTGTAGTGAAGAACCTCCATATTCCATCAATCCAGATTGGAAGAAGACAAAGAACACAAGACCGAAACTGAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486767.1 |
||
| CDS CCA 90 bp | CGGTCTTGTGTTCTTTGTCTTCTTCCAATCTGGATTGATGGAATATaGAGGTTCTTCACTACAGCGTCGTATCTCATGTCTGTTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RSCVLCLLPIWIDGI*RFFTTASYLMSVSV Trigger: TACAGAAACAGACATGAGATACGACGCTGTAGTGAAGAACCTCCATATTCCATCAATCCAGATTGGAAGAAGACAAAGAACACAAGACCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486767.1 |
||
| CDS CAA 90 bp | GGATTCAGTTTCGGTCTTGTGTTCTTTGTCTTCTTCCAATCTGGATaGATGGAATATGGAGGTTCTTCACTACAGCGTCGTATCTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GFSFGLVFFVFFQSG*MEYGGSSLQRRISC Trigger: ACATGAGATACGACGCTGTAGTGAAGAACCTCCATATTCCATCAATCCAGATTGGAAGAAGACAAAGAACACAAGACCGAAACTGAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486767.1 |
||
| CDS CCA 72 bp | GTTCTTTGTCTTCTTCCAATCTGGATTGATGGAATATaGAGGTTCTTCACTACAGCGTCGTATCTCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLCLLPIWIDGI*RFFTTASYLMS Trigger: AGACATGAGATACGACGCTGTAGTGAAGAACCTCCATATTCCATCAATCCAGATTGGAAGAAGACAAAGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486767.1 |
||
| CDS TCA 72 bp | GTGTCTCTGATAGTATTTCCAGAAGAGATTGGTATTTaGTTCAGTAGACTGAGTAAACATCACTCTCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VSLIVFPEEIGI*FSRLSKHHSHQ Trigger: TTGGTGAGAGTGATGTTTACTCAGTCTACTGAATCAAATACCAATCTCTTCTGGAAATACTATCAGAGACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486767.1 |
||