Pregenerated sensors for LINC01284 (Homo sapiens)
Ensembl gene IDs: ENSG00000230317Ensembl transcript IDs: ENST00000442994.1, ENST00000659896.1, ENST00000665808.1, ENST00000666173.1, ENST00000668331.1, ENST00000669956.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCTCAGGTGGTAATGCTGGCTCACCCGCTGCTCACCTCCTGCTGTaGAGCCCCATTTCTGACAGGCCACTGACTGGTACTGGTCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSGGNAGSPAAHLLL*SPISDRPLTGTGLW Trigger: CCACAGACCAGTACCAGTCAGTGGCCTGTCAGAAATGGGGCTGCACAGCAGGAGGTGAGCAGCGGGTGAGCCAGCATTACCACCTGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | CGGGGGACATACACAGCCAGTGCACAGGCAATGATGTGGAGCCACTaGGGCAGTGAAATTGCAGTGAGGTACTGGCTGACGGGTGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: RGTYTASAQAMMWSH*GSEIAVRYWLTGVC Trigger: ACACACACCCGTCAGCCAGTACCTCACTGCAATTTCACTGCCTCAGTGGCTCCACATCATTGCCTGTGCACTGGCTGTGTATGTCCCCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | AGGGCGAAGGGGACACTTTCCCTTGGTTCCTACAGTTTGAGGCTGTaGGCAGGCTCTGCTCTCCTGACCCACAGCCAAGTGAATCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RAKGTLSLGSYSLRL*AGSALLTHSQVNPG Trigger: ACCTGGATTCACTTGGCTGTGGGTCAGGAGAGCAGAGCCTGCTCACAGCCTCAAACTGTAGGAACCAAGGGAAAGTGTCCCCTTCGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 90 bp | CAGCATAAGCAGCAGAGGTGGGCAGGAGCCACCCCCATAAGAGGCTaGCTATGGGGGAAACACAGAATAGTTGAACCCAGCTCTCACCTG | + |
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Preference number: 5 (lower is better) Translates to: QHKQQRWAGATPIRG*LWGKHRIVEPSSHL Trigger: CAGGTGAGAGCTGGGTTCAACTATTCTGTGTTTCCCCCATAGGCAGCCTCTTATGGGGGTGGCTCCTGCCCACCTCTGCTGCTTATGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | AGCCACCCCCATAAGAGGCTGCCTATGGGGGAAACACAGAATAGTTaGACCCAGCTCTCACCTGGGAAAGCTGTCCCTGGGATCCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SHPHKRLPMGETQNS*TQLSPGKAVPGILR Trigger: TCTGAGGATCCCAGGGACAGCTTTCCCAGGTGAGAGCTGGGTTCAACTATTCTGTGTTTCCCCCATAGGCAGCCTCTTATGGGGGTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | GTTCACAATAGGGTTCACGCTCCTTTGAGAATCTACTGCCACCACTaGTCTGACAGGAGGCAAAGCTCAGGTGGTAATGCTGGCTCACCC | + |
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Preference number: 5 (lower is better) Translates to: VHNRVHAPLRIYCHH*SDRRQSSGGNAGSP Trigger: GGGTGAGCCAGCATTACCACCTGAGCTTTGCCTCCTGTCAGATCAGTGGTGGCAGTAGATTCTCAAAGGAGCGTGAACCCTATTGTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 90 bp | CCCTTGCTAGCCAGCCTCCTCTTCCCTCCCTCCCATAACCTGTCTTaGCACTATAACCTGTTTTACCACTATCACCTGCTTGTGGCCATT | + |
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Preference number: 5 (lower is better) Translates to: PLLASLLFPPSHNLS*HYNLFYHYHLLVAI Trigger: AATGGCCACAAGCAGGTGATAGTGGTAAAACAGGTTATAGTGGCAAGACAGGTTATGGGAGGGAGGGAAGAGGAGGCTGGCTAGCAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 90 bp | CTTGCGGAGTCAAATGAGCCAGCTGTTCTATGGAAACATCCACTCTaGATTCAGCGAAGAGCTCTTCTTCCACAGCACAATGAAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LAESNEPAVLWKHPL*IQRRALLPQHNEGK Trigger: CTTCCCTTCATTGTGCTGTGGAAGAAGAGCTCTTCGCTGAATGCAGAGTGGATGTTTCCATAGAACAGCTGGCTCATTTGACTCCGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 90 bp | GGTAAAGTAGGAGGACTTGCGGAGTCAAATGAGCCAGCTGTTCTATaGAAACATCCACTCTGCATTCAGCGAAGAGCTCTTCTTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: GKVGGLAESNEPAVL*KHPLCIQRRALLPQ Trigger: CTGTGGAAGAAGAGCTCTTCGCTGAATGCAGAGTGGATGTTTCCATAGAACAGCTGGCTCATTTGACTCCGCAAGTCCTCCTACTTTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | AGCAACATTTACCATCTATTTACTCTGAGGGCTGCTACCTACCTGTaGGAGTTCTTCTACCTAACAAGACCACCCTTGCTAGCCAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SNIYHLFTLRAATYL*EFFYLTRPPLLASL Trigger: GAGGCTGGCTAGCAAGGGTGGTCTTGTTAGGTAGAAGAACTCTCACAGGTAGGTAGCAGCCCTCAGAGTAAATAGATGGTAAATGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 90 bp | AAATGGAGGGATTCCTGTGAAGGAGGAGGCAAACAAGCATGGGGCTaGTATACAGGAGTAGAGGAGCCCATGAAAACCTTTCCAAACATT | + |
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Preference number: 5 (lower is better) Translates to: KWRDSCEGGGKQAWG*YTGVEEPMKTFPNI Trigger: AATGTTTGGAAAGGTTTTCATGGGCTCCTCTACTCCTGTATAGCAGCCCCATGCTTGTTTGCCTCCTCCTTCACAGGAATCCCTCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | AGAACCCAAGGTCTCCTTCTGAACTTCTCCTACCCACTATATTGCTaGTCCGTCCTGGAATCTCTAAGAGGGGCTTTTTCTGAAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RTQGLLLNFSYPLYC*SVLESLRGAFSEVS Trigger: AGAAACTTCAGAAAAAGCCCCTCTTAGAGATTCCAGGACGGATCAGCAATATAGTGGGTAGGAGAAGTTCAGAAGGAGACCTTGGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000666173.1 ENST00000668331.1 |
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| CDS GCA 90 bp | TTACCACTATCACCTGCTTGTGGCCATTCCCTAAGCCAACGTTTTTaGTGTAATCTCAGGATGGTATATAAGCTTCCTCAGGTCATTGGG | + |
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Preference number: 5 (lower is better) Translates to: LPLSPACGHSLSQRF*CNLRMVYKLPQVIG Trigger: CCCAATGACCTGAGGAAGCTTATATACCATCCTGAGATTACAGCAAAAACGTTGGCTTAGGGAATGGCCACAAGCAGGTGATAGTGGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 90 bp | TCCTTGGTTAAGTCACAGCTTTGGTTAAGGCTTATTGCTTTCACTTaGGAAGGTATCTTTCAAAAGTCCCAAGTCCCAAGTTCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: SLVKSQLWLRLIAFT*EGIFQKSQVPSSTS Trigger: GGACGTGGAACTTGGGACTTGGGACTTTTGAAAGATACCTTCCCAAGTGAAAGCAATAAGCCTTAACCAAAGCTGTGACTTAACCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | ATCATTTTAGGTTCTCTCTCATCTTGTTTGATGTCCTTGAAAGCTTaGCTTGTGACCAAGTGGAAGGACTCTCTTGGTCTGTGCCATCCA | + |
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Preference number: 5 (lower is better) Translates to: IILGSLSSCLMSLKA*LVTKWKDSLGLCHP Trigger: TGGATGGCACAGACCAAGAGAGTCCTTCCACTTGGTCACAAGTCAAGCTTTCAAGGACATCAAACAAGATGAGAGAGAACCTAAAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 90 bp | CCAAGCCTTCCCTTGTCTGGACCTAGGAGAAAGGAACTAAGATTCTaGTGCCTTAATGACTGGAAAGCAACATTTACCATCTATTTACTC | + |
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Preference number: 5 (lower is better) Translates to: PSLPLSGPRRKELRF*CLNDWKATFTIYLL Trigger: GAGTAAATAGATGGTAAATGTTGCTTTCCAGTCATTAAGGCATCAGAATCTTAGTTCCTTTCTCCTAGGTCCAGACAAGGGAAGGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 90 bp | GGTAAGGATTTCTTACCAGTCAGGCTCCAGGTCTCTGTCTTTCTGTaGAATCTGGTCAAGTGGATGGTAAATATTGTTATTTGTTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: GKDFLPVRLQVSVFL*NLVKWMVNIVICFS Trigger: AGAAAAACAAATAACAATATTTACCATCCACTTGACCAGATTCCACAGAAAGACAGAGACCTGGAGCCTGACTGGTAAGAAATCCTTACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 90 bp | CAGGCATACTGGTTCCATTCCACATTTGTGATCACCAACTGCAGGTaGATTTTCCACTATGCTGAACAATTATACAATATGGATCATATG | + |
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Preference number: 5 (lower is better) Translates to: QAYWFHSTFVITNCR*IFHYAEQLYNMDHM Trigger: CATATGATCCATATTGTATAATTGTTCAGCATAGTGGAAAATCCACCTGCAGTTGGTGATCACAAATGTGGAATGGAACCAGTATGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666173.1 |
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| CDS GCA 72 bp | GGTAATGCTGGCTCACCCGCTGCTCACCTCCTGCTGTaGAGCCCCATTTCTGACAGGCCACTGACTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: GNAGSPAAHLLL*SPISDRPLTGT Trigger: AGTACCAGTCAGTGGCCTGTCAGAAATGGGGCTGCACAGCAGGAGGTGAGCAGCGGGTGAGCCAGCATTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | ACGTCCTGGAGGCAGCTTCCAAGCAACACCAGTAACTaGAGCATAAGCAGCAGAGGTGGGCAGGAGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: TSWRQLPSNTSN*SISSRGGQEPP Trigger: GGGTGGCTCCTGCCCACCTCTGCTGCTTATGCTGCAGTTACTGGTGTTGCTTGGAAGCTGCCTCCAGGACGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | CAGCAGAGGTGGGCAGGAGCCACCCCCATAAGAGGCTaGCTATGGGGGAAACACAGAATAGTTGAACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: QQRWAGATPIRG*LWGKHRIVEPS Trigger: GCTGGGTTCAACTATTCTGTGTTTCCCCCATAGGCAGCCTCTTATGGGGGTGGCTCCTGCCCACCTCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | AATTTCAGCTTGTCCAAGTGGTGTGCATGGAGGCAGTaGTCGTGTTCCCAGAGGCCACCCAGGCAGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: NFSLSKWCAWRQ*SCSQRPPRQRR Trigger: CCTCCTCTGCCTGGGTGGCCTCTGGGAACACGACCACTGCCTCCATGCACACCACTTGGACAAGCTGAAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000442994.1 ENST00000659896.1 ENST00000668331.1 |
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| CDS GCA 72 bp | CCTTGGTTCCTACAGTTTGAGGCTGTGAGCAGGCTCTaGTCTCCTGACCCACAGCCAAGTGAATCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWFLQFEAVSRL*SPDPQPSESRS Trigger: GGACCTGGATTCACTTGGCTGTGGGTCAGGAGAGCAGAGCCTGCTCACAGCCTCAAACTGTAGGAACCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | TGGAGGGATTCCTGTGAAGGAGGAGGCAAACAAGCATaGGGCTGCTATACAGGAGTAGAGGAGCCCATGAAA | + |
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Preference number: 6 (lower is better) Translates to: WRDSCEGGGKQA*GCYTGVEEPMK Trigger: TTTCATGGGCTCCTCTACTCCTGTATAGCAGCCCCATGCTTGTTTGCCTCCTCCTTCACAGGAATCCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | AGGGTTCACGCTCCTTTGAGAATCTACTGCCACCACTaGTCTGACAGGAGGCAAAGCTCAGGTGGTAATGCT | + |
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Preference number: 6 (lower is better) Translates to: RVHAPLRIYCHH*SDRRQSSGGNA Trigger: AGCATTACCACCTGAGCTTTGCCTCCTGTCAGATCAGTGGTGGCAGTAGATTCTCAAAGGAGCGTGAACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 90 bp | CTCTCTTGGTCTGTGCCATCCAGGCAGCATAATTTTCGAGTCCCATaGGGTGGCCAGTCTCAAAAAGGCTTTGAAGATGACGGGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: LSWSVPSRQHNFRVP*GGQSQKGFEDDGLM Trigger: CATCAACCCGTCATCTTCAAAGCCTTTTTGAGACTGGCCACCCAATGGGACTCGAAAATTATGCTGCCTGGATGGCACAGACCAAGAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | CTGTGCCATCCAGGCAGCATAATTTTCGAGTCCCATTaGGTGGCCAGTCTCAAAAAGGCTTTGAAGATGACG | + |
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Preference number: 6 (lower is better) Translates to: LCHPGSIIFESH*VASLKKALKMT Trigger: CGTCATCTTCAAAGCCTTTTTGAGACTGGCCACCCAATGGGACTCGAAAATTATGCTGCCTGGATGGCACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | CACACAGCCAGGCATACTGGTTCCATTCCACATTTGTaGTCACCAACTGCAGGTGGATTTTCCACTATGCTG | + |
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Preference number: 6 (lower is better) Translates to: HTARHTGSIPHL*SPTAGGFSTML Trigger: CAGCATAGTGGAAAATCCACCTGCAGTTGGTGATCACAAATGTGGAATGGAACCAGTATGCCTGGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666173.1 |
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| CDS GCA 72 bp | CCTTTATCTCCTCTGTGCTCTCAGTTGGGATGCAGCTaGTGTTCCTCATGGGAACCAAATAAGGTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: PLSPLCSQLGCS*CSSWEPNKVLN Trigger: ATTCAGGACCTTATTTGGTTCCCATGAGGAACAGCAGCTGCATCCCAACTGAGAGCACAGAGGAGATAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669956.1 |
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| CDS CCA 72 bp | GAAAGCTTGACTTGTGACCAAGTGGAAGGACTCTCTTaGTCTGTGCCATCCAGGCAGCATAATTTTCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: ESLTCDQVEGLS*SVPSRQHNFRV Trigger: GACTCGAAAATTATGCTGCCTGGATGGCACAGACCAAGAGAGTCCTTCCACTTGGTCACAAGTCAAGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 72 bp | TCTGTGCCATCCAGGCAGCATAATTTTCGAGTCCCATaGGGTGGCCAGTCTCAAAAAGGCTTTGAAGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SVPSRQHNFRVP*GGQSQKGFEDD Trigger: GTCATCTTCAAAGCCTTTTTGAGACTGGCCACCCAATGGGACTCGAAAATTATGCTGCCTGGATGGCACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 72 bp | CCAAGGTCTCCTTCTGAACTTCTCCTACCCACTATATaGCTGATCCGTCCTGGAATCTCTAAGAGGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: PRSPSELLLPTI*LIRPGISKRGF Trigger: AAAGCCCCTCTTAGAGATTCCAGGACGGATCAGCAATATAGTGGGTAGGAGAAGTTCAGAAGGAGACCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666173.1 ENST00000668331.1 |
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| CDS TCA 72 bp | TTTGTGGGGGAAACTTGCATGTGTAGAAAATTTGCATaGACTCAGCCAAGCCTTCCCTTGTCTGGACCTAGG | + |
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Preference number: 6 (lower is better) Translates to: FVGETCMCRKFA*TQPSLPLSGPR Trigger: CCTAGGTCCAGACAAGGGAAGGCTTGGCTGAGTTCATGCAAATTTTCTACACATGCAAGTTTCCCCCACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | GGTCTCCTTCTGAACTTCTCCTACCCACTATATTGCTaGTCCGTCCTGGAATCTCTAAGAGGGGCTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: GLLLNFSYPLYC*SVLESLRGAFS Trigger: AGAAAAAGCCCCTCTTAGAGATTCCAGGACGGATCAGCAATATAGTGGGTAGGAGAAGTTCAGAAGGAGACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000666173.1 ENST00000668331.1 |
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| CDS CCA 72 bp | TTGGATACTTTTCCAAGTTATGTAGGAGCCACAGCATaGCTGTCACAGCTCAGGGGCCTCTTCAAATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LDTFPSYVGATA*LSQLRGLFKFQ Trigger: CTGAAATTTGAAGAGGCCCCTGAGCTGTGACAGCCATGCTGTGGCTCCTACATAACTTGGAAAAGTATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000442994.1 ENST00000659896.1 ENST00000668331.1 |
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| CDS CCA 72 bp | AGGAAAATGGAGAGAGGAGCGGTTTTTAACCCTAAATaGAGGGATTCCTGTGAAGGAGGAGGCAAACAAGCA | + |
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Preference number: 6 (lower is better) Translates to: RKMERGAVFNPK*RDSCEGGGKQA Trigger: TGCTTGTTTGCCTCCTCCTTCACAGGAATCCCTCCATTTAGGGTTAAAAACCGCTCCTCTCTCCATTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | GACCTGCACGTTCTGCACACGTATCCTAGAAATGTTTaGAGATGCCTTGTGAATCCTTGGTTAAGTCACAGC | + |
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Preference number: 6 (lower is better) Translates to: DLHVLHTYPRNV*RCLVNPWLSHS Trigger: GCTGTGACTTAACCAAGGATTCACAAGGCATCTCCAAACATTTCTAGGATACGTGTGCAGAACGTGCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 72 bp | AGGATGGTATATAAGCTTCCTCAGGTCATTGGGTGGTaGGGTCATCATGCTGTGATGTTCCCTGTGTACACA | + |
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Preference number: 6 (lower is better) Translates to: RMVYKLPQVIGW*GHHAVMFPVYT Trigger: TGTGTACACAGGGAACATCACAGCATGATGACCCAACCACCCAATGACCTGAGGAAGCTTATATACCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | GGTTCTCTCTCATCTTGTTTGATGTCCTTGAAAGCTTaGCTTGTGACCAAGTGGAAGGACTCTCTTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLSSCLMSLKA*LVTKWKDSLGL Trigger: CAGACCAAGAGAGTCCTTCCACTTGGTCACAAGTCAAGCTTTCAAGGACATCAAACAAGATGAGAGAGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | TACCATCTATTTACTCTGAGGGCTGCTACCTACCTGTaGGAGTTCTTCTACCTAACAAGACCACCCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: YHLFTLRAATYL*EFFYLTRPPLL Trigger: TAGCAAGGGTGGTCTTGTTAGGTAGAAGAACTCTCACAGGTAGGTAGCAGCCCTCAGAGTAAATAGATGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | TCAAATGAGCCAGCTGTTCTATGGAAACATCCACTCTaGATTCAGCGAAGAGCTCTTCTTCCACAGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: SNEPAVLWKHPL*IQRRALLPQHN Trigger: ATTGTGCTGTGGAAGAAGAGCTCTTCGCTGAATGCAGAGTGGATGTTTCCATAGAACAGCTGGCTCATTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | TCACCTGCTTGTGGCCATTCCCTAAGCCAACGTTTTTaGTGTAATCTCAGGATGGTATATAAGCTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SPACGHSLSQRF*CNLRMVYKLPQ Trigger: CTGAGGAAGCTTATATACCATCCTGAGATTACAGCAAAAACGTTGGCTTAGGGAATGGCCACAAGCAGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | TGTCTTGCCACTATAACCTGTTTTACCACTATCACCTaGTTGTGGCCATTCCCTAAGCCAACGTTTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CLATITCFTTIT*LWPFPKPTFLL Trigger: CAGCAAAAACGTTGGCTTAGGGAATGGCCACAAGCAGGTGATAGTGGTAAAACAGGTTATAGTGGCAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 90 bp | TGTAATCTCAGGATGGTATATAAGCTTCCTCAGGTCATTGGGTGGTaGGGTCATCATGCTGTGATGTTCCCTGTGTACACATCAGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: CNLRMVYKLPQVIGW*GHHAVMFPVYTSVK Trigger: CTTTACTGATGTGTACACAGGGAACATCACAGCATGATGACCCAACCACCCAATGACCTGAGGAAGCTTATATACCATCCTGAGATTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS TCA 72 bp | GATATACTGAAGGCCTTATCTTTGAAGATGACGGGTTaGTGGGTTCAGCAAACCACCATGGCACATGTATAC | + |
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Preference number: 6 (lower is better) Translates to: DILKALSLKMTG*WVQQTTMAHVY Trigger: GTATACATGTGCCATGGTGGTTTGCTGAACCCATCAACCCGTCATCTTCAAAGATAAGGCCTTCAGTATATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000442994.1 ENST00000669956.1 |
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| CDS TCA 72 bp | CCAAAGTCTCATCTGGAGATGAGTTCCTTTCACGTATaGGCTTCCAAAGAGAAGCTGATGATAAACCGACAG | + |
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Preference number: 6 (lower is better) Translates to: PKSHLEMSSFHV*ASKEKLMINRQ Trigger: CTGTCGGTTTATCATCAGCTTCTCTTTGGAAGCTCATACGTGAAAGGAACTCATCTCCAGATGAGACTTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | CACGTTCTGCACACGTATCCTAGAAATGTTTGGAGATaGCTTGTGAATCCTTGGTTAAGTCACAGCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HVLHTYPRNVWR*LVNPWLSHSFG Trigger: ACCAAAGCTGTGACTTAACCAAGGATTCACAAGGCATCTCCAAACATTTCTAGGATACGTGTGCAGAACGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 72 bp | AGGTTCTCTCTCATCTTGTTTGATGTCCTTGAAAGCTaGACTTGTGACCAAGTGGAAGGACTCTCTTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: RFSLILFDVLES*TCDQVEGLSWS Trigger: AGACCAAGAGAGTCCTTCCACTTGGTCACAAGTCAAGCTTTCAAGGACATCAAACAAGATGAGAGAGAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 72 bp | AGCCAGCAAGAAGAAGTAGCCCTGCAAAGCTGTCTTTaGTGGGGGAAACTTGCATGTGTAGAAAATTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: SQQEEVALQSCL*WGKLACVENLH Trigger: ATGCAAATTTTCTACACATGCAAGTTTCCCCCACAAAAGACAGCTTTGCAGGGCTACTTCTTCTTGCTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 90 bp | TATCATTTTAGGTTCTCTCTCATCTTGTTTGATGTCCTTGAAAGCTaGACTTGTGACCAAGTGGAAGGACTCTCTTGGTCTGTGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: YHFRFSLILFDVLES*TCDQVEGLSWSVPS Trigger: GGATGGCACAGACCAAGAGAGTCCTTCCACTTGGTCACAAGTCAAGCTTTCAAGGACATCAAACAAGATGAGAGAGAACCTAAAATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CAA 90 bp | TATAAAGACAGCCAGCAAGAAGAAGTAGCCCTGCAAAGCTGTCTTTaGTGGGGGAAACTTGCATGTGTAGAAAATTTGCATGAACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: YKDSQQEEVALQSCL*WGKLACVENLHELS Trigger: GCTGAGTTCATGCAAATTTTCTACACATGCAAGTTTCCCCCACAAAAGACAGCTTTGCAGGGCTACTTCTTCTTGCTGGCTGTCTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | GAGATGCCTTGTGAATCCTTGGTTAAGTCACAGCTTTaGTTAAGGCTTATTGCTTTCACTTGGGAAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: EMPCESLVKSQL*LRLIAFTWEGI Trigger: GATACCTTCCCAAGTGAAAGCAATAAGCCTTAACCAAAGCTGTGACTTAACCAAGGATTCACAAGGCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS GCA 72 bp | GCATACTGGTTCCATTCCACATTTGTGATCACCAACTaGAGGTGGATTTTCCACTATGCTGAACAATTATAC | + |
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Preference number: 6 (lower is better) Translates to: AYWFHSTFVITN*RWIFHYAEQLY Trigger: GTATAATTGTTCAGCATAGTGGAAAATCCACCTGCAGTTGGTGATCACAAATGTGGAATGGAACCAGTATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666173.1 |
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| CDS GCA 72 bp | AGAGAGCAGTTCCAAGAGATTACCTGGGACTTTATCTaGATCATAAGACAACCTTTGTTCAAAGTGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: REQFQEITWDFI*IIRQPLFKVPF Trigger: GAATGGCACTTTGAACAAAGGTTGTCTTATGATGCAGATAAAGTCCCAGGTAATCTCTTGGAACTGCTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668331.1 |
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| CDS CCA 72 bp | AAGTCACAGCTTTGGTTAAGGCTTATTGCTTTCACTTaGGAAGGTATCTTTCAAAAGTCCCAAGTCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: KSQLWLRLIAFT*EGIFQKSQVPS Trigger: ACTTGGGACTTGGGACTTTTGAAAGATACCTTCCCAAGTGAAAGCAATAAGCCTTAACCAAAGCTGTGACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | TTCTTACCAGTCAGGCTCCAGGTCTCTGTCTTTCTGTaGAATCTGGTCAAGTGGATGGTAAATATTGTTATT | + |
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Preference number: 6 (lower is better) Translates to: FLPVRLQVSVFL*NLVKWMVNIVI Trigger: AATAACAATATTTACCATCCACTTGACCAGATTCCACAGAAAGACAGAGACCTGGAGCCTGACTGGTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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| CDS CCA 72 bp | TGGTTCCATTCCACATTTGTGATCACCAACTGCAGGTaGATTTTCCACTATGCTGAACAATTATACAATATG | + |
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Preference number: 6 (lower is better) Translates to: WFHSTFVITNCR*IFHYAEQLYNM Trigger: CATATTGTATAATTGTTCAGCATAGTGGAAAATCCACCTGCAGTTGGTGATCACAAATGTGGAATGGAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666173.1 |
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| CDS TCA 72 bp | TGTGATCACCAACTGCAGGTGGATTTTCCACTATGCTaGACAATTATACAATATGGATCATATGTCAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CDHQLQVDFPLC*TIIQYGSYVSK Trigger: TTTGCTGACATATGATCCATATTGTATAATTGTTCAGCATAGTGGAAAATCCACCTGCAGTTGGTGATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666173.1 |
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| CDS CAA 72 bp | CTAGTGACTCTGGTATACTTTTTGGTACTTTGTGGTTaGAATATTCATAGTGTTTGGTCCCTTTTCTACCAG | + |
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Preference number: 6 (lower is better) Translates to: LVTLVYFLVLCG*NIHSVWSLFYQ Trigger: CTGGTAGAAAAGGGACCAAACACTATGAATATTCAAACCACAAAGTACCAAAAAGTATACCAGAGTCACTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665808.1 |
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