Pregenerated sensors for LINC01282 (Homo sapiens)
Ensembl gene IDs: ENSG00000236747Ensembl transcript IDs: ENST00000431646.1, ENST00000648247.1, ENST00000670107.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTTGCTCTGGGGAATGGGTATCAGTCCTGCAAGCCTCCAGTCCTaGTGCAGGCGTAGTGGGCCACAGCAGCCAGAAAAAGCCCACAGG | + |
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Preference number: 5 (lower is better) Translates to: GLLWGMGISPASLQS*CRRSGPQQPEKAHR Trigger: CCTGTGGGCTTTTTCTGGCTGCTGTGGCCCACTACGCCTGCAGCAGGACTGGAGGCTTGCAGGACTGATACCCATTCCCCAGAGCAACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS GCA 90 bp | GCTGCAGGCGTAGTGGGCCACAGCAGCCAGAAAAAGCCCACAGGCTaGAAGACACAGCTTCCTGCAGTCAGAAATCAGGCTGGCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: AAGVVGHSSQKKPTG*KTQLPAVRNQAGMH Trigger: GTGCATGCCAGCCTGATTTCTGACTGCAGGAAGCTGTGTCTTGCAGCCTGTGGGCTTTTTCTGGCTGCTGTGGCCCACTACGCCTGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS GCA 90 bp | GTGATTAGACTGTGGGCATGGGACACAGGGCATGCCACCGCCATCTaGCACATCAACAGACCTCCCAGTGTCTTATTGCTGGCAGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: VIRLWAWDTGHATAI*HINRPPSVLLLAEG Trigger: TCCTTCTGCCAGCAATAAGACACTGGGAGGTCTGTTGATGTGGCAGATGGCGGTGGCATGCCCTGTGTCCCATGCCCACAGTCTAATCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS CCA 90 bp | TGGCCATGGGTCGGCTTATGTGGCATGGGTCCCACTGAGCAACTTTaGTTTTGGCTGCAGATCTGCTGGGCTTGGGTCCTTACTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: WPWVGLCGMGPTEQL*FWLQICWAWVLTVE Trigger: TTCCACAGTAAGGACCCAAGCCCAGCAGATCTGCAGCCAAAACCAAAGTTGCTCAGTGGGACCCATGCCACATAAGCCGACCCATGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS TCA 90 bp | ATTTTCAGGTTGGCCATGGGTCGGCTTATGTGGCATGGGTCCCACTaGGCAACTTTGGTTTTGGCTGCAGATCTGCTGGGCTTGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: IFRLAMGRLMWHGSH*ATLVLAADLLGLGP Trigger: AGGACCCAAGCCCAGCAGATCTGCAGCCAAAACCAAAGTTGCTCAGTGGGACCCATGCCACATAAGCCGACCCATGGCCAACCTGAAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS GCA 90 bp | TCGGCTTATGTGGCATGGGTCCCACTGAGCAACTTTGGTTTTGGCTaGAGATCTGCTGGGCTTGGGTCCTTACTGTGGAATGGGTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SAYVAWVPLSNFGFG*RSAGLGSLLWNGFS Trigger: ACTGAACCCATTCCACAGTAAGGACCCAAGCCCAGCAGATCTGCAGCCAAAACCAAAGTTGCTCAGTGGGACCCATGCCACATAAGCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS TCA 90 bp | AAGAGAGCTGGGATATTTATCCACCCAATCCTGAAGGTCATTGGTTaGGGGTTGCTCTGGGGAATGGGTATCAGTCCTGCAAGCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: KRAGIFIHPILKVIG*GLLWGMGISPASLQ Trigger: CTGGAGGCTTGCAGGACTGATACCCATTCCCCAGAGCAACCCTCAACCAATGACCTTCAGGATTGGGTGGATAAATATCCCAGCTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS TCA 90 bp | CATCAACAGACCTCCCAGTGTCTTATTGCTGGCAGAAGGAGAGGCTaGGAAATGAACATTTTAGCTCTTCCAGCCTCTGCCCCAATCCTG | + |
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Preference number: 5 (lower is better) Translates to: HQQTSQCLIAGRRRG*EMNILALPASAPIL Trigger: CAGGATTGGGGCAGAGGCTGGAAGAGCTAAAATGTTCATTTCTCAGCCTCTCCTTCTGCCAGCAATAAGACACTGGGAGGTCTGTTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS TCA 90 bp | TTTGAAACTAGTGCTGGAGACCTTGAGACTGGATGCTGTCTTGCATaGGGTGAATTGGAACACACGGAACTGTCCACCACAGCTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: FETSAGDLETGCCLA*GELEHTELSTTAVT Trigger: AGTCACAGCTGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS TCA 90 bp | CAGAAAGATGCACAGCACATACTTGAGACTGGATGCTGTCTTGCATaGGGTGAATTGGAACACACGGAACTGTCCACCACAGCTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: QKDAQHILETGCCLA*GELEHTELSTTAVT Trigger: AGTCACAGCTGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTATGTGCTGTGCATCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS TCA 90 bp | GAGTTGAAAGATAAACAACTCTCATTTGTCCGGGCCACAGGACAGTaGGTGTGGAACATTCCCAGGCTTCAGTCAGGATACTTAACATCA | + |
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Preference number: 5 (lower is better) Translates to: ELKDKQLSFVRATGQ*VWNIPRLQSGYLTS Trigger: TGATGTTAAGTATCCTGACTGAAGCCTGGGAATGTTCCACACTCACTGTCCTGTGGCCCGGACAAATGAGAGTTGTTTATCTTTCAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000648247.1 |
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| CDS GCA 72 bp | TGGGGAATGGGTATCAGTCCTGCAAGCCTCCAGTCCTaGTGCAGGCGTAGTGGGCCACAGCAGCCAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: WGMGISPASLQS*CRRSGPQQPEK Trigger: TTTTTCTGGCTGCTGTGGCCCACTACGCCTGCAGCAGGACTGGAGGCTTGCAGGACTGATACCCATTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS GCA 72 bp | CTGTGGGCATGGGACACAGGGCATGCCACCGCCATCTaGCACATCAACAGACCTCCCAGTGTCTTATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LWAWDTGHATAI*HINRPPSVLLL Trigger: CAGCAATAAGACACTGGGAGGTCTGTTGATGTGGCAGATGGCGGTGGCATGCCCTGTGTCCCATGCCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS CCA 72 bp | GTCGGCTTATGTGGCATGGGTCCCACTGAGCAACTTTaGTTTTGGCTGCAGATCTGCTGGGCTTGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VGLCGMGPTEQL*FWLQICWAWVL Trigger: AAGGACCCAAGCCCAGCAGATCTGCAGCCAAAACCAAAGTTGCTCAGTGGGACCCATGCCACATAAGCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS GCA 72 bp | GTGGCATGGGTCCCACTGAGCAACTTTGGTTTTGGCTaGAGATCTGCTGGGCTTGGGTCCTTACTGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VAWVPLSNFGFG*RSAGLGSLLWN Trigger: ATTCCACAGTAAGGACCCAAGCCCAGCAGATCTGCAGCCAAAACCAAAGTTGCTCAGTGGGACCCATGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000431646.1 ENST00000648247.1 ENST00000670107.1 |
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| CDS GCA 72 bp | CCTCCTGATAACTGTACACAATGCCTCCCAGAAGTGTaGCCCCAAAGGACAGGTGGCTGGAGCATCTATCCA | + |
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Preference number: 6 (lower is better) Translates to: PPDNCTQCLPEV*PQRTGGWSIYP Trigger: TGGATAGATGCTCCAGCCACCTGTCCTTTGGGGGCACACTTCTGGGAGGCATTGTGTACAGTTATCAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS CAA 90 bp | AGAGAAGGCCCTGGAGCAGAGAGCAGAAAGATGCACAGCACATACTaGAGACTGGATGCTGTCTTGCATGAGGTGAATTGGAACACACGG | + |
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Preference number: 6 (lower is better) Translates to: REGPGAESRKMHSTY*RLDAVLHEVNWNTR Trigger: CCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTATGTGCTGTGCATCTTTCTGCTCTCTGCTCCAGGGCCTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS TCA 72 bp | AGTGCTGGAGACCTTGAGACTGGATGCTGTCTTGCATaGGGTGAATTGGAACACACGGAACTGTCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: SAGDLETGCCLA*GELEHTELSTT Trigger: TGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS CCA 72 bp | CTCACACTTCCAAGTTTTGTTTTTATGCAGGCCCAGTaGGCTTCCATAGTGTCAGAGAAGGCCCTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTLPSFVFMQAQ*ASIVSEKALEQ Trigger: CTGCTCCAGGGCCTTCTCTGACACTATGGAAGCCCACTGGGCCTGCATAAAAACAAAACTTGGAAGTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS CAA 90 bp | GAGAGCAGAAAGATGCACAGCACATACTTGAGACTGGATGCTGTCTaGCATGAGGTGAATTGGAACACACGGAACTGTCCACCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ESRKMHSTYLRLDAV*HEVNWNTRNCPPQL Trigger: CAGCTGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTATGTGCTGTGCATCTTTCTGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS TCA 72 bp | GGGATATTTATCCACCCAATCCTGAAGGTCATTGGTTaGGGGTTGCTCTGGGGAATGGGTATCAGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GIFIHPILKVIG*GLLWGMGISPA Trigger: TGCAGGACTGATACCCATTCCCCAGAGCAACCCTCAACCAATGACCTTCAGGATTGGGTGGATAAATATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS TCA 72 bp | GATAAACAACTCTCATTTGTCCGGGCCACAGGACAGTaGGTGTGGAACATTCCCAGGCTTCAGTCAGGATAC | + |
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Preference number: 6 (lower is better) Translates to: DKQLSFVRATGQ*VWNIPRLQSGY Trigger: GTATCCTGACTGAAGCCTGGGAATGTTCCACACTCACTGTCCTGTGGCCCGGACAAATGAGAGTTGTTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000648247.1 |
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| CDS TCA 72 bp | GCACAGCACATACTTGAGACTGGATGCTGTCTTGCATaGGGTGAATTGGAACACACGGAACTGTCCACCACA | + |
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Preference number: 6 (lower is better) Translates to: AQHILETGCCLA*GELEHTELSTT Trigger: TGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTATGTGCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS CCA 72 bp | AGCTGGGATATTTATCCACCCAATCCTGAAGGTCATTaGTTGAGGGTTGCTCTGGGGAATGGGTATCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SWDIYPPNPEGH*LRVALGNGYQS Trigger: GGACTGATACCCATTCCCCAGAGCAACCCTCAACCAATGACCTTCAGGATTGGGTGGATAAATATCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS CAA 72 bp | TGGGATATTTATCCACCCAATCCTGAAGGTCATTGGTaGAGGGTTGCTCTGGGGAATGGGTATCAGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: WDIYPPNPEGHW*RVALGNGYQSC Trigger: GCAGGACTGATACCCATTCCCCAGAGCAACCCTCAACCAATGACCTTCAGGATTGGGTGGATAAATATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS CAA 72 bp | CCTGGAGCAGAGAGCAGAAAGATGCACAGCACATACTaGAGACTGGATGCTGTCTTGCATGAGGTGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PGAESRKMHSTY*RLDAVLHEVNW Trigger: CCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTATGTGCTGTGCATCTTTCTGCTCTCTGCTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670107.1 |
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| CDS TCA 72 bp | AGAGTAAGAGAGCTGGGATATTTATCCACCCAATCCTaGAGGTCATTGGTTGAGGGTTGCTCTGGGGAATGG | + |
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Preference number: 6 (lower is better) Translates to: RVRELGYLSTQS*RSLVEGCSGEW Trigger: CCATTCCCCAGAGCAACCCTCAACCAATGACCTTCAGGATTGGGTGGATAAATATCCCAGCTCTCTTACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS CAA 72 bp | GCTGTTAGAAGTCCACACTTGAGACTGGATGCTGTCTaGCATGAGGTGAATTGGAACACACGGAACTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AVRSPHLRLDAV*HEVNWNTRNCP Trigger: TGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTGTGGACTTCTAACAGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431646.1 |
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| CDS CAA 90 bp | TATAAGATGGCTGTTAGAAGTCCACACTTGAGACTGGATGCTGTCTaGCATGAGGTGAATTGGAACACACGGAACTGTCCACCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: YKMAVRSPHLRLDAV*HEVNWNTRNCPPQL Trigger: CAGCTGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGTGTGGACTTCTAACAGCCATCTTATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431646.1 |
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| CDS CAA 90 bp | CATAATTTGAAACTAGTGCTGGAGACCTTGAGACTGGATGCTGTCTaGCATGAGGTGAATTGGAACACACGGAACTGTCCACCACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HNLKLVLETLRLDAV*HEVNWNTRNCPPQL Trigger: CAGCTGTGGTGGACAGTTCCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAATTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS TCA 72 bp | TGGCCATTTACAGGGGAGAAGCTCTTCTCATGGTGCTaGAGAGTAAGAGAGCTGGGATATTTATCCACCCAA | + |
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Preference number: 6 (lower is better) Translates to: WPFTGEKLFSWC*RVRELGYLSTQ Trigger: TTGGGTGGATAAATATCCCAGCTCTCTTACTCTTCAGCACCATGAGAAGAGCTTCTCCCCTGTAAATGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000431646.1 ENST00000670107.1 |
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| CDS CCA 72 bp | CCCTCTGGAAGCAGAGATGACGTTTGTGATATAAGATaGCTGTTAGAAGTCCACACCTCTCCAGGAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PSGSRDDVCDIR*LLEVHTSPGAF Trigger: AAAAGCTCCTGGAGAGGTGTGGACTTCTAACAGCCATCTTATATCACAAACGTCATCTCTGCTTCCAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS CAA 90 bp | TCCACACCTCTCCAGGAGCTTTTAGAGAAGCCAAGTCTTCATAATTaGAAACTAGTGCTGGAGACCTTGAGACTGGATGCTGTCTTGCAT | + |
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Preference number: 6 (lower is better) Translates to: STPLQELLEKPSLHN*KLVLETLRLDAVLH Trigger: ATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAATTATGAAGACTTGGCTTCTCTAAAAGCTCCTGGAGAGGTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS CAA 90 bp | TTAGAGAAGCCAAGTCTTCATAATTTGAAACTAGTGCTGGAGACCTaGAGACTGGATGCTGTCTTGCATGAGGTGAATTGGAACACACGG | + |
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Preference number: 6 (lower is better) Translates to: LEKPSLHNLKLVLET*RLDAVLHEVNWNTR Trigger: CCGTGTGTTCCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAATTATGAAGACTTGGCTTCTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS CAA 72 bp | CCAAGTCTTCATAATTTGAAACTAGTGCTGGAGACCTaGAGACTGGATGCTGTCTTGCATGAGGTGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: PSLHNLKLVLET*RLDAVLHEVNW Trigger: CCAATTCACCTCATGCAAGACAGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAATTATGAAGACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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| CDS CAA 72 bp | CTCCAGGAGCTTTTAGAGAAGCCAAGTCTTCATAATTaGAAACTAGTGCTGGAGACCTTGAGACTGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LQELLEKPSLHN*KLVLETLRLDA Trigger: AGCATCCAGTCTCAAGGTCTCCAGCACTAGTTTCAAATTATGAAGACTTGGCTTCTCTAAAAGCTCCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648247.1 |
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