RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01270 (Homo sapiens)

Ensembl gene IDs: ENSG00000203999

Ensembl transcript IDs: ENST00000371639.8, ENST00000457853.1, ENST00000653657.1, ENST00000653865.1, ENST00000653970.1, ENST00000655316.1, ENST00000655675.1, ENST00000655925.1, ENST00000661795.1, ENST00000662382.1, ENST00000663616.1, ENST00000664104.1, ENST00000669676.1, ENST00000671482.1

Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CCCCTGCCCTCATGGAGATTCCTGCGCTTTCGTGAGGTGAGAGGATaGGAGCAGGCGCTGCGAGGGCCTTCCAGGTCTCCAGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PLPSWRFLRFREVRG*EQALRGPSRSPACS
Trigger: GCTGCAGGCTGGAGACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATCTCCATGAGGGCAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655675.1
CDS CCA 90 bp GAACCCAGCTCCGCCCGACACCGCAGCCAGCATTGCTCTCATCCATaGCAGTGCACGGAGACCATGTCGGTGCCAGCTATGTGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: EPSSARHRSQHCSHP*QCTETMSVPAMCQV
Trigger: CACCTGGCACATAGCTGGCACCGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCGGGCGGAGCTGGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS TCA 90 bp TGCGAGGGCCTTCCAGGTCTCCAGCCTGCAGCTCAACTCCAAAGATaGGAAGCATCTGGGCTAACTGGTGCTTCCCGCTGGCGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: CEGLPGLQPAAQLQR*EASGLTGASRWRGL
Trigger: CAAGCCCCGCCAGCGGGAAGCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAGGCCCTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662382.1
CDS GCA 90 bp GCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTaGCCTTTTCGTCTGTGTCCCTTGCCACCCAACACGAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ACTALEQVRSSWVPP*PFRLCPLPPNTSSA
Trigger: TGCTGAGCTCGTGTTGGGTGGCAAGGGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 90 bp AAGGACACGGAGGTGTCCAGGCTCGGCTCCAAAAGCAGACAAGCCTaGACTGCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTGC +
Preference number: 5 (lower is better)
Translates to: KDTEVSRLGSKSRQA*TALEQVRSSWVPPC
Trigger: GCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGGAGCCGAGCCTGGACACCTCCGTGTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 90 bp CATGGCAGTGCACGGAGACCATGTCGGTGCCAGCTATGTGCCAGGTaGTGGTTCAGAGCACAGGTCCTGGAGCCAGACTGCTCAGTGCGT +
Preference number: 5 (lower is better)
Translates to: HGSARRPCRCQLCAR*WFRAQVLEPDCSVR
Trigger: ACGCACTGAGCAGTCTGGCTCCAGGACCTGTGCTCTGAACCAGCACCTGGCACATAGCTGGCACCGACATGGTCTCCGTGCACTGCCATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS GCA 90 bp AAGTCAGCATTGGAACCCAGCTCCGCCCGACACCGCAGCCAGCATTaGTCTCATCCATGGCAGTGCACGGAGACCATGTCGGTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: KSALEPSSARHRSQH*SHPWQCTETMSVPA
Trigger: AGCTGGCACCGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCGGGCGGAGCTGGGTTCCAATGCTGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS GCA 90 bp CAGAGAAGCCGGAAAGAGGGTGTCTGCGTGGCGGAGGCTGGTCCTTaGTCACCTGCCTTCTTGCTCTCTACCCCATTGCCTGGGGAGGTA +
Preference number: 5 (lower is better)
Translates to: QRSRKEGVCVAEAGP*SPAFLLSTPLPGEV
Trigger: TACCTCCCCAGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGGCTTCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CCA 90 bp CCAGGAGCCTTGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACCTaGGCAGGTAATTACCCACGGCCTGAGGGAGGGTGCAGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: PGALMKGGGKWALLT*AGNYPRPEGGCRGV
Trigger: GACCCCTCTGCACCCTCCCTCAGGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 90 bp AGGAGGACAGAGAAGCCGGAAAGAGGGTGTCTGCGTGGCGGAGGCTaGTCCTTGCTCACCTGCCTTCTTGCTCTCTACCCCATTGCCTGG +
Preference number: 5 (lower is better)
Translates to: RRTEKPERGCLRGGG*SLLTCLLALYPIAW
Trigger: CCAGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGGCTTCTCTGTCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS TCA 90 bp GGCTCGGCTCCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTaGGAAGTAGCTGGGTTCCACCGTGCCCTTTTCGTCTGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: GSAPKADKPALRWSR*EVAGFHRALFVCVP
Trigger: AGGGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGGAGCCGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 90 bp AGAGGATGGGAGCAGGCGCTGCGAGGGCCTTCCAGGTCTCCAGCCTaGAGCTCAACTCCAAAGATGAGAAGCATCTGGGCTAACTGGTGC +
Preference number: 5 (lower is better)
Translates to: RGWEQALRGPSRSPA*SSTPKMRSIWANWC
Trigger: GCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS GCA 90 bp ACCCAGGGCAAAGTAGGAGGACAGAGAAGCCGGAAAGAGGGTGTCTaGGTGGCGGAGGCTGGTCCTTGCTCACCTGCCTTCTTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: TQGKVGGQRSRKEGV*VAEAGPCSPAFLLS
Trigger: AGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGGCTTCTCTGTCCTCCTACTTTGCCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CCA 90 bp GGGAGAAAGGGCAGCTGTGGGGGTGGGGATGTCCAGTCTGCTCACTaGGGTGCCGATTACAGGTTTGGGACCAGCTGGACACCTCATTCA +
Preference number: 5 (lower is better)
Translates to: GRKGSCGGGDVQSAH*GADYRFGTSWTPHS
Trigger: TGAATGAGGTGTCCAGCTGGTCCCAAACCTGTAATCGGCACCCCAGTGAGCAGACTGGACATCCCCACCCCCACAGCTGCCCTTTCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 90 bp AAACAGACAAAATCCCCTGCCCTCATGGAGATTCCTGCGCTTTCGTaGGGTGAGAGGATGGGAGCAGGCGCTGCGAGGGCCTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: KQTKSPALMEIPALS*GERMGAGAARAFQV
Trigger: GACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATCTCCATGAGGGCAGGGGATTTTGTCTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000655675.1
CDS CCA 90 bp AGCCGCAGAAAGCAGATCAGCCACAGTCGGCAGGCGATGGGAGTGTaGATGGGGCGGCCGGGAGGGATGAATGACAAAAAGACACAAGGA +
Preference number: 5 (lower is better)
Translates to: SRRKQISHSRQAMGV*MGRPGGMNDKKTQG
Trigger: TCCTTGTGTCTTTTTGTCATTCATCCCTCCCGGCCGCCCCATCCACACTCCCATCGCCTGCCGACTGTGGCTGATCTGCTTTCTGCGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS CCA 90 bp GTCACTTCTGGTTCTCATTCAACCCCAGGCCAGCCTCTTTCCAGGTaGGTAGGGCCCAGTGTGCCCAAACATCTGGCCATCGTTCTGGCC +
Preference number: 5 (lower is better)
Translates to: VTSGSHSTPGQPLSR*VGPSVPKHLAIVLA
Trigger: GGCCAGAACGATGGCCAGATGTTTGGGCACACTGGGCCCTACCCACCTGGAAAGAGGCTGGCCTGGGGTTGAATGAGAACCAGAAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 90 bp TACTGCCTGGCAGCTCCAGGAGCCTTGATGAAAGGTGGCGGGAAGTaGGCGCTATTAACCTGGGCAGGTAATTACCCACGGCCTGAGGGA +
Preference number: 5 (lower is better)
Translates to: YCLAAPGALMKGGGK*ALLTWAGNYPRPEG
Trigger: TCCCTCAGGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGGAGCTGCCAGGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 90 bp CCCAAGGGTGCTGACAGACATGCCAAGGGAGGGGGTGGTTGGTCGTaGAGATCTGCCCAGAGTAAGTCCACAAACCCAGGGCAAAGTAGG +
Preference number: 5 (lower is better)
Translates to: PKGADRHAKGGGGWS*RSAQSKSTNPGQSR
Trigger: CCTACTTTGCCCTGGGTTTGTGGACTTACTCTGGGCAGATCTCCACGACCAACCACCCCCTCCCTTGGCATGTCTGTCAGCACCCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CCA 90 bp CTTTCCCCCAAGGGTGCTGACAGACATGCCAAGGGAGGGGGTGGTTaGTCGTGGAGATCTGCCCAGAGTAAGTCCACAAACCCAGGGCAA +
Preference number: 5 (lower is better)
Translates to: LSPKGADRHAKGGGG*SWRSAQSKSTNPGQ
Trigger: TTGCCCTGGGTTTGTGGACTTACTCTGGGCAGATCTCCACGACCAACCACCCCCTCCCTTGGCATGTCTGTCAGCACCCTTGGGGGAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS TCA 90 bp TCCAGTACTTTTCATTGGCTCCAAACCCACATTCCTGCGCTTTCGTaGGGTGAGAGGATGGGAGCAGGCGCTGCGAGGGCCTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: SSTFHWLQTHIPALS*GERMGAGAARAFQV
Trigger: GACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATGTGGGTTTGGAGCCAATGAAAAGTACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS GCA 90 bp GGAGTGGTCACAAGCCACACAGTCCCAGGGTTGAAATCCCATCTCTaGCGCTCCTCTGGCCAGAAGACCTGGACAACACTCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GVVTSHTVPGLKSHL*RSSGQKTWTTLLTS
Trigger: AGAGGTGAGGAGTGTTGTCCAGGTCTTCTGGCCAGAGGAGCGGCAGAGATGGGATTTCAACCCTGGGACTGTGTGGCTTGTGACCACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS GCA 90 bp GCGTGTCCAGGTGCAGTTGAGACACCCCACACTCACAGCCCTCACTaGAGTTCTGCAAGATCAGGACCACCACGATCACCCTTCACAGGT +
Preference number: 5 (lower is better)
Translates to: ACPGAVETPHTHSPH*SSARSGPPRSPFTG
Trigger: ACCTGTGAAGGGTGATCGTGGTGGTCCTGATCTTGCAGAACTGCAGTGAGGGCTGTGAGTGTGGGGTGTCTCAACTGCACCTGGACACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CCA 90 bp AAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTaGGTTCCACCGTGCCCTTTTCGTCTGTGTCCCTTGCCACCCAAC +
Preference number: 5 (lower is better)
Translates to: KSRQACTALEQVRSS*VPPCPFRLCPLPPN
Trigger: GTTGGGTGGCAAGGGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 90 bp CCAGGAGCCTTGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACCTaGGCAGGTAATTACCCACGGCTGTACATGATTCAGCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: PGALMKGGGKWALLT*AGNYPRLYMIQRQP
Trigger: GGGCTGGCGCTGAATCATGTACAGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653865.1
CDS CCA 90 bp AAGCCACACAGTCCCAGGGTTGAAATCCCATCTCTGCCGCTCCTCTaGCCAGAAGACCTGGACAACACTCCTCACCTCTTGGGCCTGTTT +
Preference number: 5 (lower is better)
Translates to: KPHSPRVEIPSLPLL*PEDLDNTPHLLGLF
Trigger: AAACAGGCCCAAGAGGTGAGGAGTGTTGTCCAGGTCTTCTGGCCAGAGGAGCGGCAGAGATGGGATTTCAACCCTGGGACTGTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 90 bp TACTGCCTGGCAGCTCCAGGAGCCTTGATGAAAGGTGGCGGGAAGTaGGCGCTATTAACCTGGGCAGGTAATTACCCACGGCTGTACATG +
Preference number: 5 (lower is better)
Translates to: YCLAAPGALMKGGGK*ALLTWAGNYPRLYM
Trigger: CATGTACAGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGGAGCTGCCAGGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653865.1
CDS TCA 90 bp CCGCACCTTCTCCCAGCAAACTCTAGCTCGTCTCTGCACATTGTATaGCCTCAGGCCAACCCCTTCCCCTCTCTGGGTCTTATGTTCCTC +
Preference number: 5 (lower is better)
Translates to: PHLLPANSSSSLHIV*PQANPFPSLGLMFL
Trigger: GAGGAACATAAGACCCAGAGAGGGGAAGGGGTTGGCCTGAGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTGGGAGAAGGTGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS CCA 90 bp CCTTCTTGCTGTCATCCCATGGCGAGGGCATCCCATGGCAAGAGGTaGCACGTGAGACAGCAAGGAATGGCCGAACTCACTTTCATGACA +
Preference number: 5 (lower is better)
Translates to: PSCCHPMARASHGKR*HVRQQGMAELTFMT
Trigger: TGTCATGAAAGTGAGTTCGGCCATTCCTTGCTGTCTCACGTGCCACCTCTTGCCATGGGATGCCCTCGCCATGGGATGACAGCAAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS GCA 90 bp GCTCAGCTCCCAGGTGCCTCCTCCTCCTTCTTCTTGGTACATGAGTaGCCCGCTTGGCATTCGCTTAGGGGTGTCTATACACACTATTTC +
Preference number: 5 (lower is better)
Translates to: AQLPGASSSFFLVHE*PAWHSLRGVYTHYF
Trigger: GAAATAGTGTGTATAGACACCCCTAAGCGAATGCCAAGCGGGGCACTCATGTACCAAGAAGAAGGAGGAGGAGGCACCTGGGAGCTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 90 bp GGGGTTCAGAGATTGAACTGTCATGGATTCAGAGGCCTGGGCCAATaGAAGTCAGTGTTCACAGAGTGCCTTCTGCGTGTCCAGGTGCAG +
Preference number: 5 (lower is better)
Translates to: GVQRLNCHGFRGLGQ*KSVFTECLLRVQVQ
Trigger: CTGCACCTGGACACGCAGAAGGCACTCTGTGAACACTGACTTTCATTGGCCCAGGCCTCTGAATCCATGACAGTTCAATCTCTGAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CCA 90 bp GGGGAGGTAACATTTGAGCCAAGAAAGATGAGAATGAGCCGGCCATaGGGAGATTGGAAGGAAGGACATTCCAGGCATCTGGCACTGCAC +
Preference number: 5 (lower is better)
Translates to: GEVTFEPRKMRMSRP*GDWKEGHSRHLALH
Trigger: GTGCAGTGCCAGATGCCTGGAATGTCCTTCCTTCCAATCTCCCCATGGCCGGCTCATTCTCATCTTTCTTGGCTCAAATGTTACCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000655925.1
ENST00000669676.1
CDS TCA 90 bp TGCGAGGGCCTTCCAGGTCTCCAGCCTGCAGCTCAACTCCAAAGATaGGAAGCATCTGGGCTAACTGGTGCTTCCTGTAATAAACGTGTT +
Preference number: 5 (lower is better)
Translates to: CEGLPGLQPAAQLQR*EASGLTGASCNKRV
Trigger: AACACGTTTATTACAGGAAGCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAGGCCCTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457853.1
ENST00000653865.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS GCA 90 bp TTCAGGTACAGTGGGATCCAGGAGTTCAAAGCCTGTCCAGCTCTGTaGTGCTTCCTGTCAGGCAGGCTTTTCCCTTGTTTTGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: FRYSGIQEFKACPAL*CFLSGRLFPCFVLF
Trigger: GAAGAGGACAAAACAAGGGAAAAGCCTGCCTGACAGGAAGCAGCACAGAGCTGGACAGGCTTTGAACTCCTGGATCCCACTGTACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS CCA 90 bp CGTTTGAATTCCAACATTCCAGAATTCTGGGACAGCTTCCAGGACTaGAGTCAGCTCCCTAGATCCCAGGAACGTTCCAGCACTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RLNSNIPEFWDSFQD*SQLPRSQERSSTSG
Trigger: CCCAGAAGTGCTGGAACGTTCCTGGGATCTAGGGAGCTGACTCCAGTCCTGGAAGCTGTCCCAGAATTCTGGAATGTTGGAATTCAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653657.1
CDS TCA 90 bp AAGGGAAGAGGGGGTTCTTCAGTAGGAAGTCGAGGTGCTGTTACCTaGAAATGGGAGATAGATGCTGACTTGTCCACACACCCGCACCTT +
Preference number: 5 (lower is better)
Translates to: KGRGGSSVGSRGAVT*KWEIDADLSTHPHL
Trigger: AAGGTGCGGGTGTGTGGACAAGTCAGCATCTATCTCCCATTTTCAGGTAACAGCACCTCGACTTCCTACTGAAGAACCCCCTCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000653657.1
CDS TCA 90 bp TTTCATCACACGTCTGCCTCCAGTGCTGACTTCAGAAGGGTGCTGTaGGGGTTAATTACTGCCTGGCAGCTCCAGGAGCTGTACATGATT +
Preference number: 5 (lower is better)
Translates to: FHHTSASSADFRRVL*GLITAWQLQELYMI
Trigger: AATCATGTACAGCTCCTGGAGCTGCCAGGCAGTAATTAACCCTCACAGCACCCTTCTGAAGTCAGCACTGGAGGCAGACGTGTGATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671482.1
CDS CCA 90 bp CGTTTGAATTCCAACATTCCAGAATTCTGGGACAGCTTCCAGGACTaGAGTCAGCTCCCTAGATCCCAGGAACGTTCCAGCACTAGTGTG +
Preference number: 5 (lower is better)
Translates to: RLNSNIPEFWDSFQD*SQLPRSQERSSTSV
Trigger: CACACTAGTGCTGGAACGTTCCTGGGATCTAGGGAGCTGACTCCAGTCCTGGAAGCTGTCCCAGAATTCTGGAATGTTGGAATTCAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000664104.1
CDS TCA 90 bp AAGACACAAGGACACCCTTGGGGGCGATGGATATGTCTGCTGTCTTaGTTGTGCTGGTGGTTTCGGAAGTGTGTGCATATGTCCAAACTC +
Preference number: 5 (lower is better)
Translates to: KTQGHPWGRWICLLS*LCWWFRKCVHMSKL
Trigger: GAGTTTGGACATATGCACACACTTCCGAAACCACCAGCACAATCAAGACAGCAGACATATCCATCGCCCCCAAGGGTGTCCTTGTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS TCA 90 bp GGGTTCTTCAGTAGGAAGTCGAGGTGCTGTTACCTAGTGTGTGCCTaGCACTGTGCTGAGCTCTGGGAACACATTGTGAATGAAACAGAC +
Preference number: 5 (lower is better)
Translates to: GFFSRKSRCCYLVCA*HCAELWEHIVNETD
Trigger: GTCTGTTTCATTCACAATGTGTTCCCAGAGCTCAGCACAGTGTCAGGCACACACTAGGTAACAGCACCTCGACTTCCTACTGAAGAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371639.8
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 90 bp TTTCATCACACGTCTGCCTCCAGTGCTGACTTCAGAAGGGTGCTGTaGGGGTTAATTACTGCCTGGCAGCTCCAGGAGCAGAAAATTGTA +
Preference number: 5 (lower is better)
Translates to: FHHTSASSADFRRVL*GLITAWQLQEQKIV
Trigger: TACAATTTTCTGCTCCTGGAGCTGCCAGGCAGTAATTAACCCTCACAGCACCCTTCTGAAGTCAGCACTGGAGGCAGACGTGTGATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000663616.1
ENST00000664104.1
CDS CCA 90 bp GCTCACTGTCCATCCAATGGAAAATGGCATCTCCTTCACAAATCATaGCCAACCCTGAAGTCCCAAGATCAAGTTTCATTGGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: AHCPSNGKWHLLHKS*PTLKSQDQVSLGRL
Trigger: GAGCCTGCCCAATGAAACTTGATCTTGGGACTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 90 bp CATCCAATGGAAAATGGCATCTCCTTCACAAATCATGGCCAACCCTaGAGTCCCAAGATCAAGTTTCATTGGGCAGGCTCAGTCATGTGC +
Preference number: 5 (lower is better)
Translates to: HPMENGISFTNHGQP*SPKIKFHWAGSVMC
Trigger: GCACATGACTGAGCCTGCCCAATGAAACTTGATCTTGGGACTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 90 bp CATCCAATGGAAAATGGCATCTCCTTCACAAATCATGGCCAACCCTaGAAATGGGAGATAGATGCTGACTTGTCCACACACCCGCACCTT +
Preference number: 5 (lower is better)
Translates to: HPMENGISFTNHGQP*KWEIDADLSTHPHL
Trigger: AAGGTGCGGGTGTGTGGACAAGTCAGCATCTATCTCCCATTTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664104.1
CDS GCA 90 bp ATGACAAAAAGACACAAGGACACCCTTGGGGGCGATGGATATGTCTaGTGTCTTGATTGTGCTGGTGGTTTCGGAAGTGTGTGCATATGT +
Preference number: 5 (lower is better)
Translates to: MTKRHKDTLGGDGYV*CLDCAGGFGSVCIC
Trigger: ACATATGCACACACTTCCGAAACCACCAGCACAATCAAGACAGCAGACATATCCATCGCCCCCAAGGGTGTCCTTGTGTCTTTTTGTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS TCA 90 bp GCTGGTGGTTTCGGAAGTGTGTGCATATGTCCAAACTCATCCACATaGACACTGGAATATGCGCAGTTTATCGTGTGTTTGTTACACCCC +
Preference number: 5 (lower is better)
Translates to: AGGFGSVCICPNSST*TLEYAQFIVCLLHP
Trigger: GGGGTGTAACAAACACACGATAAACTGCGCATATTCCAGTGTTCATGTGGATGAGTTTGGACATATGCACACACTTCCGAAACCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS CCA 90 bp CCTGACACCTGCTCTCCTTTTCACAAAGGGAGACTAGCAATTATTTaGTCTTCGAGGCAAGTTAGCACCACACAGAGACTCTTCTGGATA +
Preference number: 5 (lower is better)
Translates to: PDTCSPFHKGRLAII*SSRQVSTTQRLFWI
Trigger: TATCCAGAAGAGTCTCTGTGTGGTGCTAACTTGCCTCGAAGACCAAATAATTGCTAGTCTCCCTTTGTGAAAAGGAGAGCAGGTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 90 bp TTCTTCTCTAAGCGTTCACTTGCTCACTGTCCATCCAATGGAAAATaGCATCTCCTTCACAAATCATGGCCAACCCTGAAGTCCCAAGAT +
Preference number: 5 (lower is better)
Translates to: FFSKRSLAHCPSNGK*HLLHKSWPTLKSQD
Trigger: ATCTTGGGACTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTTAGAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 90 bp TTCTTCTCTAAGCGTTCACTTGCTCACTGTCCATCCAATGGAAAATaGCATCTCCTTCACAAATCATGGCCAACCCTGAAAATGGGAGAT +
Preference number: 5 (lower is better)
Translates to: FFSKRSLAHCPSNGK*HLLHKSWPTLKMGD
Trigger: ATCTCCCATTTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTTAGAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000664104.1
CDS TCA 90 bp AGGAAAGACTGTAAAGAATTTGCAGAGAGAATAACTCTCGCTATGTaGCCCGAGGTGATTTTATGCTTTGCCTGTGCAGCCTATAAAATA +
Preference number: 5 (lower is better)
Translates to: RKDCKEFAERITLAM*PEVILCFACAAYKI
Trigger: TATTTTATAGGCTGCACAGGCAAAGCATAAAATCACCTCGGGTCACATAGCGAGAGTTATTCTCTCTGCAAATTCTTTACAGTCTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 90 bp TGTTTGCAAATGTTTCTAGTGGCTTTATTTATAATGGCTGAAAACTaGAAACAGTCCAAATATCCCTCAGCTGGTGAATGGATGAACAAG +
Preference number: 5 (lower is better)
Translates to: CLQMFLVALFIMAEN*KQSKYPSAGEWMNK
Trigger: CTTGTTCATCCATTCACCAGCTGAGGGATATTTGGACTGTTTCCAGTTTTCAGCCATTATAAATAAAGCCACTAGAAACATTTGCAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653865.1
ENST00000663616.1
CDS CAA 90 bp GAAGTCAGCATTGGAACCCAGCTCCGCCCGACACCGCAGCCAGCATaGCTCTCATCCATGGCAGTGCACGGAGACCATGTCGGTGCCAGC +
Preference number: 6 (lower is better)
Translates to: EVSIGTQLRPTPQPA*LSSMAVHGDHVGAS
Trigger: GCTGGCACCGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCGGGCGGAGCTGGGTTCCAATGCTGACTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS TCA 72 bp AAATCCCCTGCCCTCATGGAGATTCCTGCGCTTTCGTaGGGTGAGAGGATGGGAGCAGGCGCTGCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: KSPALMEIPALS*GERMGAGAARA
Trigger: GGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATCTCCATGAGGGCAGGGGATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655675.1
CDS GCA 72 bp CATCAACCAGGAGATGCTGGAGAGTCTGAGACAGCGTaGTGGCAGCACTCTGCCGGGGGAAGGACACGGAGG +
Preference number: 6 (lower is better)
Translates to: HQPGDAGESETA*WQHSAGGRTRR
Trigger: CCTCCGTGTCCTTCCCCCGGCAGAGTGCTGCCAGCACGCTGTCTCAGACTCTCCAGCATCTCCTGGTTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 72 bp TTGGAACCCAGCTCCGCCCGACACCGCAGCCAGCATTaGTCTCATCCATGGCAGTGCACGGAGACCATGTCG +
Preference number: 6 (lower is better)
Translates to: LEPSSARHRSQH*SHPWQCTETMS
Trigger: CGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCGGGCGGAGCTGGGTTCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CCA 72 bp GGCAGCTGTGGGGGTGGGGATGTCCAGTCTGCTCACTaGGGTGCCGATTACAGGTTTGGGACCAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: GSCGGGDVQSAH*GADYRFGTSWT
Trigger: TGTCCAGCTGGTCCCAAACCTGTAATCGGCACCCCAGTGAGCAGACTGGACATCCCCACCCCCACAGCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp TCCGCCCGACACCGCAGCCAGCATTGCTCTCATCCATaGCAGTGCACGGAGACCATGTCGGTGCCAGCTATG +
Preference number: 6 (lower is better)
Translates to: SARHRSQHCSHP*QCTETMSVPAM
Trigger: CATAGCTGGCACCGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCGGGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CCA 72 bp GAGAAGCCGGAAAGAGGGTGTCTGCGTGGCGGAGGCTaGTCCTTGCTCACCTGCCTTCTTGCTCTCTACCCC +
Preference number: 6 (lower is better)
Translates to: EKPERGCLRGGG*SLLTCLLALYP
Trigger: GGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 72 bp CCGGAAAGAGGGTGTCTGCGTGGCGGAGGCTGGTCCTaGCTCACCTGCCTTCTTGCTCTCTACCCCATTGCC +
Preference number: 6 (lower is better)
Translates to: PERGCLRGGGWS*LTCLLALYPIA
Trigger: GGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 90 bp GCGGAGGCTGGTCCTTGCTCACCTGCCTTCTTGCTCTCTACCCCATaGCCTGGGGAGGTACTGAGGCTAGGGTCCCAGGGATTTCACTGC +
Preference number: 6 (lower is better)
Translates to: AEAGPCSPAFLLSTP*PGEVLRLGSQGFHC
Trigger: GCAGTGAAATCCCTGGGACCCTAGCCTCAGTACCTCCCCAGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 90 bp ACAGAGAAGCCGGAAAGAGGGTGTCTGCGTGGCGGAGGCTGGTCCTaGCTCACCTGCCTTCTTGCTCTCTACCCCATTGCCTGGGGAGGT +
Preference number: 6 (lower is better)
Translates to: TEKPERGCLRGGGWS*LTCLLALYPIAWGG
Trigger: ACCTCCCCAGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCGGCTTCTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS GCA 72 bp GAGCAGGCGCTGCGAGGGCCTTCCAGGTCTCCAGCCTaGAGCTCAACTCCAAAGATGAGAAGCATCTGGGCT +
Preference number: 6 (lower is better)
Translates to: EQALRGPSRSPA*SSTPKMRSIWA
Trigger: AGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAGGCCCTCGCAGCGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS GCA 72 bp GCGCTGGAGCAGGTGAGAAGTAGCTGGGTTCCACCGTaGCCTTTTCGTCTGTGTCCCTTGCCACCCAACACG +
Preference number: 6 (lower is better)
Translates to: ALEQVRSSWVPP*PFRLCPLPPNT
Trigger: CGTGTTGGGTGGCAAGGGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 72 bp CGACACCGCAGCCAGCATTGCTCTCATCCATGGCAGTaGACGGAGACCATGTCGGTGCCAGCTATGTGCCAG +
Preference number: 6 (lower is better)
Translates to: RHRSQHCSHPWQ*TETMSVPAMCQ
Trigger: CTGGCACATAGCTGGCACCGACATGGTCTCCGTGCACTGCCATGGATGAGAGCAATGCTGGCTGCGGTGTCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS GCA 72 bp CGGAAAGAGGGTGTCTGCGTGGCGGAGGCTGGTCCTTaGTCACCTGCCTTCTTGCTCTCTACCCCATTGCCT +
Preference number: 6 (lower is better)
Translates to: RKEGVCVAEAGP*SPAFLLSTPLP
Trigger: AGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAAGGACCAGCCTCCGCCACGCAGACACCCTCTTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CCA 72 bp AAACCCACATTCCTGCGCTTTCGTGAGGTGAGAGGATaGGAGCAGGCGCTGCGAGGGCCTTCCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: KPTFLRFREVRG*EQALRGPSRSP
Trigger: TGGAGACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATGTGGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS CCA 72 bp TCATGGAGATTCCTGCGCTTTCGTGAGGTGAGAGGATaGGAGCAGGCGCTGCGAGGGCCTTCCAGGTCTCCA +
Preference number: 6 (lower is better)
Translates to: SWRFLRFREVRG*EQALRGPSRSP
Trigger: TGGAGACCTGGAAGGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATCTCCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000655675.1
CDS CCA 72 bp CCAGCCTGCAGCTCAACTCCAAAGATGAGAAGCATCTaGGCTAACTGGTGCTTCCCGCTGGCGGGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: PACSSTPKMRSI*ANWCFPLAGLG
Trigger: CCCAAGCCCCGCCAGCGGGAAGCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000662382.1
CDS CAA 72 bp TCCAGGCTGTGCAGCCTGAGAAAGGTGAAGTCAGCATaGGAACCCAGCTCCGCCCGACACCGCAGCCAGCAT +
Preference number: 6 (lower is better)
Translates to: SRLCSLRKVKSA*EPSSARHRSQH
Trigger: ATGCTGGCTGCGGTGTCGGGCGGAGCTGGGTTCCAATGCTGACTTCACCTTTCTCAGGCTGCACAGCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS TCA 72 bp TTTCATTGGCTCCAAACCCACATTCCTGCGCTTTCGTaGGGTGAGAGGATGGGAGCAGGCGCTGCGAGGGCC +
Preference number: 6 (lower is better)
Translates to: FHWLQTHIPALS*GERMGAGAARA
Trigger: GGCCCTCGCAGCGCCTGCTCCCATCCTCTCACCTCACGAAAGCGCAGGAATGTGGGTTTGGAGCCAATGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS TCA 72 bp CTCCCCGGCCCCCGGCCTGGGAACATGTTTAGAAGATaGCAACTGGGCTCCCTTTGGCCGAAATTCCACTCC +
Preference number: 6 (lower is better)
Translates to: LPGPRPGNMFRR*QLGSLWPKFHS
Trigger: GGAGTGGAATTTCGGCCAAAGGGAGCCCAGTTGTCATCTTCTAAACATGTTCCCAGGCCGGGGGCCGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000653657.1
CDS CCA 72 bp AAGCAGATCAGCCACAGTCGGCAGGCGATGGGAGTGTaGATGGGGCGGCCGGGAGGGATGAATGACAAAAAG +
Preference number: 6 (lower is better)
Translates to: KQISHSRQAMGV*MGRPGGMNDKK
Trigger: CTTTTTGTCATTCATCCCTCCCGGCCGCCCCATCCACACTCCCATCGCCTGCCGACTGTGGCTGATCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS CCA 72 bp CAAGCCTGCACTGCGCTGGAGCAGGTGAGAAGTAGCTaGGTTCCACCGTGCCCTTTTCGTCTGTGTCCCTTG +
Preference number: 6 (lower is better)
Translates to: QACTALEQVRSS*VPPCPFRLCPL
Trigger: CAAGGGACACAGACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp GCCTTCTTGCTGTCATCCCATGGCGAGGGCATCCCATaGCAAGAGGTGGCACGTGAGACAGCAAGGAATGGC +
Preference number: 6 (lower is better)
Translates to: AFLLSSHGEGIP*QEVARETARNG
Trigger: GCCATTCCTTGCTGTCTCACGTGCCACCTCTTGCCATGGGATGCCCTCGCCATGGGATGACAGCAAGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 72 bp GCTGACAGACATGCCAAGGGAGGGGGTGGTTGGTCGTaGAGATCTGCCCAGAGTAAGTCCACAAACCCAGGG +
Preference number: 6 (lower is better)
Translates to: ADRHAKGGGGWS*RSAQSKSTNPG
Trigger: CCCTGGGTTTGTGGACTTACTCTGGGCAGATCTCCACGACCAACCACCCCCTCCCTTGGCATGTCTGTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 72 bp CCGAAGATGGAGGGGCTCACTCAAGCAAGGGCCTTCTaGCTGTCATCCCATGGCGAGGGCATCCCATGGCAA +
Preference number: 6 (lower is better)
Translates to: PKMEGLTQARAF*LSSHGEGIPWQ
Trigger: TTGCCATGGGATGCCCTCGCCATGGGATGACAGCAAGAAGGCCCTTGCTTGAGTGAGCCCCTCCATCTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS TCA 72 bp CCAAAAGCAGACAAGCCTGCACTGCGCTGGAGCAGGTaGGAAGTAGCTGGGTTCCACCGTGCCCTTTTCGTC +
Preference number: 6 (lower is better)
Translates to: PKADKPALRWSR*EVAGFHRALFV
Trigger: GACGAAAAGGGCACGGTGGAACCCAGCTACTTCTCACCTGCTCCAGCGCAGTGCAGGCTTGTCTGCTTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 72 bp GGTGCAGTTGAGACACCCCACACTCACAGCCCTCACTaGAGTTCTGCAAGATCAGGACCACCACGATCACCC +
Preference number: 6 (lower is better)
Translates to: GAVETPHTHSPH*SSARSGPPRSP
Trigger: GGGTGATCGTGGTGGTCCTGATCTTGCAGAACTGCAGTGAGGGCTGTGAGTGTGGGGTGTCTCAACTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CCA 72 bp TGTCATCCCATGGCGAGGGCATCCCATGGCAAGAGGTaGCACGTGAGACAGCAAGGAATGGCCGAACTCACT +
Preference number: 6 (lower is better)
Translates to: CHPMARASHGKR*HVRQQGMAELT
Trigger: AGTGAGTTCGGCCATTCCTTGCTGTCTCACGTGCCACCTCTTGCCATGGGATGCCCTCGCCATGGGATGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 72 bp TTGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACCTaGGCAGGTAATTACCCACGGCCTGAGGGAGGGTGC +
Preference number: 6 (lower is better)
Translates to: LMKGGGKWALLT*AGNYPRPEGGC
Trigger: GCACCCTCCCTCAGGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS CCA 72 bp GCAGCTCCAGGAGCCTTGATGAAAGGTGGCGGGAAGTaGGCGCTATTAACCTGGGCAGGTAATTACCCACGG +
Preference number: 6 (lower is better)
Translates to: AAPGALMKGGGK*ALLTWAGNYPR
Trigger: CCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457853.1
ENST00000653865.1
CDS CAA 90 bp AAGGGTGCTGTGAGGGTTAATTACTGCCTGGCAGCTCCAGGAGCCTaGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACCTGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: KGAVRVNYCLAAPGA*MKGGGKWALLTWAG
Trigger: ACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGGAGCTGCCAGGCAGTAATTAACCCTCACAGCACCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457853.1
ENST00000653865.1
CDS TCA 72 bp CTTCCAGGTCTCCAGCCTGCAGCTCAACTCCAAAGATaGGAAGCATCTGGGCTAACTGGTGCTTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: LPGLQPAAQLQR*EASGLTGASRW
Trigger: CCAGCGGGAAGCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000662382.1
CDS GCA 72 bp ACAAGCCACACAGTCCCAGGGTTGAAATCCCATCTCTaGCGCTCCTCTGGCCAGAAGACCTGGACAACACTC +
Preference number: 6 (lower is better)
Translates to: TSHTVPGLKSHL*RSSGQKTWTTL
Trigger: GAGTGTTGTCCAGGTCTTCTGGCCAGAGGAGCGGCAGAGATGGGATTTCAACCCTGGGACTGTGTGGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS GCA 72 bp ACCCGCACCTTCTCCCAGCAAACTCTAGCTCGTCTCTaGACATTGTATGACCTCAGGCCAACCCCTTCCCCT +
Preference number: 6 (lower is better)
Translates to: TRTFSQQTLARL*TLYDLRPTPSP
Trigger: AGGGGAAGGGGTTGGCCTGAGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTGGGAGAAGGTGCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS GCA 72 bp TCTGGGCCCTGCCTTGTGCCCAAAAGTGCTGTGTCATaGTCCGTCATGTGGCTCCGGGTCATTAATACCCGA +
Preference number: 6 (lower is better)
Translates to: SGPCLVPKSAVS*SVMWLRVINTR
Trigger: TCGGGTATTAATGACCCGGAGCCACATGACGGAGCATGACACAGCACTTTTGGGCACAAGGCAGGGCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS CCA 72 bp TTGCTCACCTGCCTTCTTGCTCTCTACCCCATTGCCTaGGGAGGTACTGAGGCTAGGGTCCCAGGGATTTCA +
Preference number: 6 (lower is better)
Translates to: LLTCLLALYPIA*GGTEARVPGIS
Trigger: TGAAATCCCTGGGACCCTAGCCTCAGTACCTCCCCAGGCAATGGGGTAGAGAGCAAGAAGGCAGGTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 72 bp GTGTTCACAGAGTGCCTTCTGCGTGTCCAGGTGCAGTaGAGACACCCCACACTCACAGCCCTCACTGCAGTT +
Preference number: 6 (lower is better)
Translates to: VFTECLLRVQVQ*RHPTLTALTAV
Trigger: AACTGCAGTGAGGGCTGTGAGTGTGGGGTGTCTCAACTGCACCTGGACACGCAGAAGGCACTCTGTGAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS TCA 72 bp CTCCCAGCAAACTCTAGCTCGTCTCTGCACATTGTATaGCCTCAGGCCAACCCCTTCCCCTCTCTGGGTCTT +
Preference number: 6 (lower is better)
Translates to: LPANSSSSLHIV*PQANPFPSLGL
Trigger: AAGACCCAGAGAGGGGAAGGGGTTGGCCTGAGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS CAA 72 bp GTGAGGGTTAATTACTGCCTGGCAGCTCCAGGAGCCTaGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACC +
Preference number: 6 (lower is better)
Translates to: VRVNYCLAAPGA*MKGGGKWALLT
Trigger: GGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAAGGCTCCTGGAGCTGCCAGGCAGTAATTAACCCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000457853.1
ENST00000653865.1
CDS CAA 72 bp GCTAGGGTCCCAGGGATTTCACTGCTACCCGAGTCCTaGAAGAAACTCATGCCCAGGCCATCCTTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: ARVPGISLLPES*KKLMPRPSFVH
Trigger: GTGGACAAAGGATGGCCTGGGCATGAGTTTCTTCAAGGACTCGGGTAGCAGTGAAATCCCTGGGACCCTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS CAA 72 bp ACCTTCTCCCAGCAAACTCTAGCTCGTCTCTGCACATaGTATGACCTCAGGCCAACCCCTTCCCCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: TFSQQTLARLCT*YDLRPTPSPLW
Trigger: CCAGAGAGGGGAAGGGGTTGGCCTGAGGTCATACAATGTGCAGAGACGAGCTAGAGTTTGCTGGGAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS TCA 72 bp CTAGGGTCCCAGGGATTTCACTGCTACCCGAGTCCTTaGAGAAACTCATGCCCAGGCCATCCTTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: LGSQGFHCYPSP*RNSCPGHPLST
Trigger: TGTGGACAAAGGATGGCCTGGGCATGAGTTTCTTCAAGGACTCGGGTAGCAGTGAAATCCCTGGGACCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS GCA 72 bp CCCAAGATCAAGTTTCATTGGGCAGGCTCAGTCATGTaGCCATCCCTGGACCAATCACTAGAGCAAGACCCG +
Preference number: 6 (lower is better)
Translates to: PKIKFHWAGSVM*PSLDQSLEQDP
Trigger: CGGGTCTTGCTCTAGTGATTGGTCCAGGGATGGGCACATGACTGAGCCTGCCCAATGAAACTTGATCTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS GCA 72 bp GGGATCCAGGAGTTCAAAGCCTGTCCAGCTCTGTGCTaGTTCCTGTCAGGCAGGCTTTTCCCTTGTTTTGTC +
Preference number: 6 (lower is better)
Translates to: GIQEFKACPALC*FLSGRLFPCFV
Trigger: GACAAAACAAGGGAAAAGCCTGCCTGACAGGAAGCAGCACAGAGCTGGACAGGCTTTGAACTCCTGGATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS CCA 72 bp GCTCACTGGGGTGCCGATTACAGGTTTGGGACCAGCTaGACACCTCATTCATATGTGCTGCAGCTCTATAGG +
Preference number: 6 (lower is better)
Translates to: AHWGADYRFGTS*TPHSYVLQLYR
Trigger: CCTATAGAGCTGCAGCACATATGAATGAGGTGTCCAGCTGGTCCCAAACCTGTAATCGGCACCCCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp GCTTGTTGTGTTCAAGGAACTGTCAAGGGGCCAGTGTaGCTGCAGCAAGAAGGAAAGGCAATGACTGAGGGG +
Preference number: 6 (lower is better)
Translates to: ACCVQGTVKGPV*LQQEGKAMTEG
Trigger: CCCCTCAGTCATTGCCTTTCCTTCTTGCTGCAGCCACACTGGCCCCTTGACAGTTCCTTGAACACAACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000655925.1
ENST00000669676.1
CDS CCA 72 bp CCAAGAAAGATGAGAATGAGCCGGCCATGGGGAGATTaGAAGGAAGGACATTCCAGGCATCTGGCACTGCAC +
Preference number: 6 (lower is better)
Translates to: PRKMRMSRPWGD*KEGHSRHLALH
Trigger: GTGCAGTGCCAGATGCCTGGAATGTCCTTCCTTCCAATCTCCCCATGGCCGGCTCATTCTCATCTTTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000655925.1
ENST00000669676.1
CDS CCA 72 bp TCCAACATTCCAGAATTCTGGGACAGCTTCCAGGACTaGAGTCAGCTCCCTAGATCCCAGGAACGTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SNIPEFWDSFQD*SQLPRSQERSS
Trigger: GCTGGAACGTTCCTGGGATCTAGGGAGCTGACTCCAGTCCTGGAAGCTGTCCCAGAATTCTGGAATGTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS CAA 72 bp TCATGGCCAACCCTGAAGTCCCAAGATCAAGTTTCATaGGGCAGGCTCAGTCATGTGCCCATCCCTGGACCA +
Preference number: 6 (lower is better)
Translates to: SWPTLKSQDQVS*GRLSHVPIPGP
Trigger: TGGTCCAGGGATGGGCACATGACTGAGCCTGCCCAATGAAACTTGATCTTGGGACTTCAGGGTTGGCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CAA 72 bp ATGTCCAGTCTGCTCACTGGGGTGCCGATTACAGGTTaGGGACCAGCTGGACACCTCATTCATATGTGCTGC +
Preference number: 6 (lower is better)
Translates to: MSSLLTGVPITG*GPAGHLIHMCC
Trigger: GCAGCACATATGAATGAGGTGTCCAGCTGGTCCCAAACCTGTAATCGGCACCCCAGTGAGCAGACTGGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CAA 90 bp TTGCAATGGTTGTTCCCTCTGCTAAAGATACCCCCTTCTCCCACCTaGACCACCCGACTAACTCTTAAGCTCAGCTCCCAGGTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: LQWLFPLLKIPPSPT*TTRLTLKLSSQVPP
Trigger: AGGAGGCACCTGGGAGCTGAGCTTAAGAGTTAGTCGGGTGGTCAAGGTGGGAGAAGGGGGTATCTTTAGCAGAGGGAACAACCATTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 72 bp GGACACCCTTGGGGGCGATGGATATGTCTGCTGTCTTaGTTGTGCTGGTGGTTTCGGAAGTGTGTGCATATG +
Preference number: 6 (lower is better)
Translates to: GHPWGRWICLLS*LCWWFRKCVHM
Trigger: CATATGCACACACTTCCGAAACCACCAGCACAATCAAGACAGCAGACATATCCATCGCCCCCAAGGGTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS TCA 72 bp GCCAGTGTGGCTGCAGCAAGAAGGAAAGGCAATGACTaGGGGGTAGATTCAGGTCAACAAACCCAAGGGGTA +
Preference number: 6 (lower is better)
Translates to: ASVAAARRKGND*GVDSGQQTQGV
Trigger: TACCCCTTGGGTTTGTTGACCTGAATCTACCCCTCAGTCATTGCCTTTCCTTCTTGCTGCAGCCACACTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000655925.1
ENST00000669676.1
CDS TCA 72 bp CCTTTGTCCACAAGGGAGAATAAGGGACCAGAGAGGTaGAAAGCAATCCCCAGGGTCACACAGCCAGTTAGC +
Preference number: 6 (lower is better)
Translates to: PLSTRENKGPER*KAIPRVTQPVS
Trigger: GCTAACTGGCTGTGTGACCCTGGGGATTGCTTTTCACCTCTCTGGTCCCTTATTCTCCCTTGTGGACAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000653657.1
ENST00000653970.1
ENST00000669676.1
CDS GCA 72 bp CAGTTTATCGTGTGTTTGTTACACCCCAGTAAAGCTTaGCCTGGGGCGGCAAAGGGTGAAGGAGGAAGCTGT +
Preference number: 6 (lower is better)
Translates to: QFIVCLLHPSKA*PGAAKGEGGSC
Trigger: ACAGCTTCCTCCTTCACCCTTTGCCGCCCCAGGGCAAGCTTTACTGGGGTGTAACAAACACACGATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000653970.1
ENST00000655316.1
ENST00000661795.1
CDS CAA 72 bp GGGTCACAGAGCAGAGCCAGATTCCAGTACTTTTCATaGGCTCCAAACCCACATTCCTGCGCTTTCGTGAGG +
Preference number: 6 (lower is better)
Translates to: GSQSRARFQYFS*APNPHSCAFVR
Trigger: CCTCACGAAAGCGCAGGAATGTGGGTTTGGAGCCAATGAAAAGTACTGGAATCTGGCTCTGCTCTGTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000371639.8
ENST00000457853.1
ENST00000653657.1
ENST00000653865.1
ENST00000653970.1
ENST00000655316.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
ENST00000671482.1
CDS CAA 72 bp TTGTTCCCTCTGCTAAAGATACCCCCTTCTCCCACCTaGACCACCCGACTAACTCTTAAGCTCAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: LFPLLKIPPSPT*TTRLTLKLSSQ
Trigger: CTGGGAGCTGAGCTTAAGAGTTAGTCGGGTGGTCAAGGTGGGAGAAGGGGGTATCTTTAGCAGAGGGAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 72 bp CTTCCAGGTCTCCAGCCTGCAGCTCAACTCCAAAGATaGGAAGCATCTGGGCTAACTGGTGCTTCCTGTAAT +
Preference number: 6 (lower is better)
Translates to: LPGLQPAAQLQR*EASGLTGASCN
Trigger: ATTACAGGAAGCACCAGTTAGCCCAGATGCTTCTCATCTTTGGAGTTGAGCTGCAGGCTGGAGACCTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457853.1
ENST00000653865.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS CCA 72 bp TTGATGAAAGGTGGCGGGAAGTGGGCGCTATTAACCTaGGCAGGTAATTACCCACGGCTGTACATGATTCAG +
Preference number: 6 (lower is better)
Translates to: LMKGGGKWALLT*AGNYPRLYMIQ
Trigger: CTGAATCATGTACAGCCGTGGGTAATTACCTGCCCAGGTTAATAGCGCCCACTTCCCGCCACCTTTCATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653865.1
CDS CAA 90 bp CTTCACAAATCATGGCCAACCCTGAAGTCCCAAGATCAAGTTTCATaGGGCAGGCTCAGTCATGTGCCCATCCCTGGACCAATCACTAGA +
Preference number: 6 (lower is better)
Translates to: LHKSWPTLKSQDQVS*GRLSHVPIPGPITR
Trigger: TCTAGTGATTGGTCCAGGGATGGGCACATGACTGAGCCTGCCCAATGAAACTTGATCTTGGGACTTCAGGGTTGGCCATGATTTGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CAA 90 bp CTGCCGCTCCTCTGGCCAGAAGACCTGGACAACACTCCTCACCTCTaGGGCCTGTTTCTTCATCTACATAGTAGTGTCTTAGTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: LPLLWPEDLDNTPHL*GLFLHLHSSVLVCF
Trigger: AAAACAGACTAAGACACTACTATGTAGATGAAGAAACAGGCCCAAGAGGTGAGGAGTGTTGTCCAGGTCTTCTGGCCAGAGGAGCGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS TCA 72 bp AGTAGGAAGTCGAGGTGCTGTTACCTAGTGTGTGCCTaGCACTGTGCTGAGCTCTGGGAACACATTGTGAAT +
Preference number: 6 (lower is better)
Translates to: SRKSRCCYLVCA*HCAELWEHIVN
Trigger: ATTCACAATGTGTTCCCAGAGCTCAGCACAGTGTCAGGCACACACTAGGTAACAGCACCTCGACTTCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371639.8
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 72 bp TATGTTCCTCCTCCGGAAAATGGGCAGGAGGCCGTTTaGATTCCAACATTCCAGAATTCTGGGACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: YVPPPENGQEAV*IPTFQNSGTAS
Trigger: GGAAGCTGTCCCAGAATTCTGGAATGTTGGAATTCAAACGGCCTCCTGCCCATTTTCCGGAGGAGGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653657.1
ENST00000664104.1
CDS TCA 72 bp GGGGGTTCTTCAGTAGGAAGTCGAGGTGCTGTTACCTaGAAATGGGAGATAGATGCTGACTTGTCCACACAC +
Preference number: 6 (lower is better)
Translates to: GGSSVGSRGAVT*KWEIDADLSTH
Trigger: GTGTGTGGACAAGTCAGCATCTATCTCCCATTTTCAGGTAACAGCACCTCGACTTCCTACTGAAGAACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000653657.1
CDS CCA 72 bp AGGAGGAAGCTGTGGGGTTCAGAGATTGAACTGTCATaGATTCAGAGGCCTGGGCCAATGAAAGTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: RRKLWGSEIELS*IQRPGPMKVSV
Trigger: AACACTGACTTTCATTGGCCCAGGCCTCTGAATCCATGACAGTTCAATCTCTGAACCCCACAGCTTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000653970.1
ENST00000661795.1
CDS CAA 90 bp AAAGACACAAGGACACCCTTGGGGGCGATGGATATGTCTGCTGTCTaGATTGTGCTGGTGGTTTCGGAAGTGTGTGCATATGTCCAAACT +
Preference number: 6 (lower is better)
Translates to: KDTRTPLGAMDMSAV*IVLVVSEVCAYVQT
Trigger: AGTTTGGACATATGCACACACTTCCGAAACCACCAGCACAATCAAGACAGCAGACATATCCATCGCCCCCAAGGGTGTCCTTGTGTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS TCA 72 bp ACACCTTGGAAAACAGCTCAGCGGTTTCTGATAAAGTaGAACATACACTTGGCCACCTGGCCCAGCAATTCC +
Preference number: 6 (lower is better)
Translates to: TPWKTAQRFLIK*NIHLATWPSNS
Trigger: GGAATTGCTGGGCCAGGTGGCCAAGTGTATGTTTCACTTTATCAGAAACCGCTGAGCTGTTTTCCAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000663616.1
CDS CAA 72 bp CTCTGGCCAGAAGACCTGGACAACACTCCTCACCTCTaGGGCCTGTTTCTTCATCTACATAGTAGTGTCTTA +
Preference number: 6 (lower is better)
Translates to: LWPEDLDNTPHL*GLFLHLHSSVL
Trigger: TAAGACACTACTATGTAGATGAAGAAACAGGCCCAAGAGGTGAGGAGTGTTGTCCAGGTCTTCTGGCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457853.1
CDS TCA 72 bp AATAAACGTGTTTCATCACACGTCTGCCTCCAGTGCTaGCTTCAGAAGGGTGCTGTGAGGGTTAATTACTGC +
Preference number: 6 (lower is better)
Translates to: NKRVSSHVCLQC*LQKGAVRVNYC
Trigger: GCAGTAATTAACCCTCACAGCACCCTTCTGAAGTCAGCACTGGAGGCAGACGTGTGATGAAACACGTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000457853.1
ENST00000653865.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS CCA 72 bp AAGCGTTCACTTGCTCACTGTCCATCCAATGGAAAATaGCATCTCCTTCACAAATCATGGCCAACCCTGAAG +
Preference number: 6 (lower is better)
Translates to: KRSLAHCPSNGK*HLLHKSWPTLK
Trigger: CTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp AAGCGTTCACTTGCTCACTGTCCATCCAATGGAAAATaGCATCTCCTTCACAAATCATGGCCAACCCTAGTG +
Preference number: 6 (lower is better)
Translates to: KRSLAHCPSNGK*HLLHKSWPTLV
Trigger: CACTAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000655316.1
CDS GCA 72 bp ACAGGTTTGGGACCAGCTGGACACCTCATTCATATGTaGTGCAGCTCTATAGGACATTTTGAAAAGTCTAGC +
Preference number: 6 (lower is better)
Translates to: TGLGPAGHLIHM*CSSIGHFEKSS
Trigger: GCTAGACTTTTCAAAATGTCCTATAGAGCTGCAGCACATATGAATGAGGTGTCCAGCTGGTCCCAAACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp TGCTCTCCTTTTCACAAAGGGAGACTAGCAATTATTTaGTCTTCGAGGCAAGTTAGCACCACACAGAGACTC +
Preference number: 6 (lower is better)
Translates to: CSPFHKGRLAII*SSRQVSTTQRL
Trigger: GAGTCTCTGTGTGGTGCTAACTTGCCTCGAAGACCAAATAATTGCTAGTCTCCCTTTGTGAAAAGGAGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CCA 72 bp AAGCGTTCACTTGCTCACTGTCCATCCAATGGAAAATaGCATCTCCTTCACAAATCATGGCCAACCCTGAAA +
Preference number: 6 (lower is better)
Translates to: KRSLAHCPSNGK*HLLHKSWPTLK
Trigger: TTTCAGGGTTGGCCATGATTTGTGAAGGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000664104.1
CDS CAA 72 bp TCCCTTGTTTTGTCCTCTTCTTCTCTAAGCGTTCACTaGCTCACTGTCCATCCAATGGAAAATGGCATCTCC +
Preference number: 6 (lower is better)
Translates to: SLVLSSSSLSVH*LTVHPMENGIS
Trigger: GGAGATGCCATTTTCCATTGGATGGACAGTGAGCAAGTGAACGCTTAGAGAAGAAGAGGACAAAACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000664104.1
ENST00000671482.1
CDS TCA 72 bp TGTAAAGAATTTGCAGAGAGAATAACTCTCGCTATGTaGCCCGAGGTGATTTTATGCTTTGCCTGTGCAGCC +
Preference number: 6 (lower is better)
Translates to: CKEFAERITLAM*PEVILCFACAA
Trigger: GGCTGCACAGGCAAAGCATAAAATCACCTCGGGTCACATAGCGAGAGTTATTCTCTCTGCAAATTCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 72 bp TTCGGAAGTGTGTGCATATGTCCAAACTCATCCACATaGACACTGGAATATGCGCAGTTTATCGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: FGSVCICPNSST*TLEYAQFIVCL
Trigger: CAAACACACGATAAACTGCGCATATTCCAGTGTTCATGTGGATGAGTTTGGACATATGCACACACTTCCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653970.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000661795.1
ENST00000663616.1
ENST00000664104.1
ENST00000669676.1
CDS TCA 72 bp AAAAGTCTAGCTAGATACAATTGTGTGCCTGAGACATaGATGAGCCTGACACCTGCTCTCCTTTTCACAAAG +
Preference number: 6 (lower is better)
Translates to: KSLARYNCVPET*MSLTPALLFTK
Trigger: CTTTGTGAAAAGGAGAGCAGGTGTCAGGCTCATTCATGTCTCAGGCACACAATTGTATCTAGCTAGACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000371639.8
ENST00000653657.1
ENST00000653865.1
ENST00000655316.1
ENST00000655675.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS CAA 90 bp CACTTTCATACATTGCTGGTAGGGATGAAAAATGGTACAGACACCTaGGAAAACAGCTCAGCGGTTTCTGATAAAGTGAAACATACACTT +
Preference number: 6 (lower is better)
Translates to: HFHTLLVGMKNGTDT*ENSSAVSDKVKHTL
Trigger: AAGTGTATGTTTCACTTTATCAGAAACCGCTGAGCTGTTTTCCAAGGTGTCTGTACCATTTTTCATCCCTACCAGCAATGTATGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000663616.1
CDS CCA 72 bp AAATATCCCTCAGCTGGTGAATGGATGAACAAGCTTTaGTACATCCATACCCTGGAACATTATTCTGCAATA +
Preference number: 6 (lower is better)
Translates to: KYPSAGEWMNKL*YIHTLEHYSAI
Trigger: TATTGCAGAATAATGTTCCAGGGTATGGATGTACCAAAGCTTGTTCATCCATTCACCAGCTGAGGGATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000371639.8
ENST00000653865.1
ENST00000655316.1
ENST00000655925.1
ENST00000662382.1
ENST00000663616.1
ENST00000671482.1
CDS TCA 72 bp GTTGAGGAAAAGAAGCCCAGTAAAGAATACACCACATaGTTCCACTTACAGAAAATTGTAGAGAACGCAAAC +
Preference number: 6 (lower is better)
Translates to: VEEKKPSKEYTT*FHLQKIVENAN
Trigger: GTTTGCGTTCTCTACAATTTTCTGTAAGTGGAATCATGTGGTGTATTCTTTACTGGGCTTCTTTTCCTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000661795.1