Pregenerated sensors for LINC01259 (Homo sapiens)
Ensembl gene IDs: ENSG00000249667Ensembl transcript IDs: ENST00000507056.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGAAGGTGGTCCCACAAAAGCCAGGGCCATCTCACAGCTCGCCTCTaGCAGGGTGGTAGATTTGAGGACCTCCATGGTGGTGCCAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: RRWSHKSQGHLTARL*QGGRFEDLHGGARL Trigger: CAACCTGGCACCACCATGGAGGTCCTCAAATCTACCACCCTGGCAGAGGCGAGCTGTGAGATGGCCCTGGCTTTTGTGGGACCACCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 90 bp | TCTGCCAGGGTGGTAGATTTGAGGACCTCCATGGTGGTGCCAGGTTaGCCTCCTCCCTCTCTGGCAGTCATGATGAAGGCATTCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: SARVVDLRTSMVVPG*PPPSLAVMMKAFTC Trigger: ACAGGTGAATGCCTTCATCATGACTGCCAGAGAGGGAGGAGGCCAACCTGGCACCACCATGGAGGTCCTCAAATCTACCACCCTGGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS GCA 90 bp | CCCAGCTCTGCAGGGATGAAACTGCCCAGGCAGATCAGGGGAACCTaGTTTTCATATACGGCCACTTTAGACAGACTCGTGTTCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: PSSAGMKLPRQIRGT*FSYTATLDRLVFKY Trigger: ATATTTGAACACGAGTCTGTCTAAAGTGGCCGTATATGAAAAGCAGGTTCCCCTGATCTGCCTGGGCAGTTTCATCCCTGCAGAGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS GCA 90 bp | AAAACAAGAGGCTTAGGAGGTGTCTGGATCCCATCTCTTCAAACCTaGTTCCTGGAGATTTCTTGTTCAAATCCACGTGTAAAGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: KTRGLGGVWIPSLQT*FLEISCSNPRVKRG Trigger: ACCTCTCTTTACACGTGGATTTGAACAAGAAATCTCCAGGAAGCAGGTTTGAAGAGATGGGATCCAGACACCTCCTAAGCCTCTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 90 bp | TCCAACATGCAGACAAATTTGAAAACAAGAGGCTTAGGAGGTGTCTaGATCCCATCTCTTCAAACCTGCTTCCTGGAGATTTCTTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SNMQTNLKTRGLGGV*IPSLQTCFLEISCS Trigger: TGAACAAGAAATCTCCAGGAAGCAGGTTTGAAGAGATGGGATCCAGACACCTCCTAAGCCTCTTGTTTTCAAATTTGTCTGCATGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 90 bp | TGCTTTTCATATACGGCCACTTTAGACAGACTCGTGTTCAAATATTaGCTCCACTGTTTTGCCTATACCTTGGTCAAATTACTTCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: CFSYTATLDRLVFKY*LHCFAYTLVKLLHL Trigger: AAGGTGAAGTAATTTGACCAAGGTATAGGCAAAACAGTGGAGCCAATATTTGAACACGAGTCTGTCTAAAGTGGCCGTATATGAAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS GCA 72 bp | TCCCACAAAAGCCAGGGCCATCTCACAGCTCGCCTCTaGCAGGGTGGTAGATTTGAGGACCTCCATGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: SHKSQGHLTARL*QGGRFEDLHGG Trigger: ACCACCATGGAGGTCCTCAAATCTACCACCCTGGCAGAGGCGAGCTGTGAGATGGCCCTGGCTTTTGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 72 bp | GCACTTCTCATCCAGTTCCAGATGACCTTCAGAAGGTaGTCCCACAAAAGCCAGGGCCATCTCACAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: ALLIQFQMTFRR*SHKSQGHLTAR Trigger: GCGAGCTGTGAGATGGCCCTGGCTTTTGTGGGACCACCTTCTGAAGGTCATCTGGAACTGGATGAGAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS GCA 72 bp | GCAGGGATGAAACTGCCCAGGCAGATCAGGGGAACCTaGTTTTCATATACGGCCACTTTAGACAGACTCGTG | + |
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Preference number: 6 (lower is better) Translates to: AGMKLPRQIRGT*FSYTATLDRLV Trigger: CACGAGTCTGTCTAAAGTGGCCGTATATGAAAAGCAGGTTCCCCTGATCTGCCTGGGCAGTTTCATCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS GCA 72 bp | GGCTTAGGAGGTGTCTGGATCCCATCTCTTCAAACCTaGTTCCTGGAGATTTCTTGTTCAAATCCACGTGTA | + |
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Preference number: 6 (lower is better) Translates to: GLGGVWIPSLQT*FLEISCSNPRV Trigger: TACACGTGGATTTGAACAAGAAATCTCCAGGAAGCAGGTTTGAAGAGATGGGATCCAGACACCTCCTAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 72 bp | CAGACAAATTTGAAAACAAGAGGCTTAGGAGGTGTCTaGATCCCATCTCTTCAAACCTGCTTCCTGGAGATT | + |
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Preference number: 6 (lower is better) Translates to: QTNLKTRGLGGV*IPSLQTCFLEI Trigger: AATCTCCAGGAAGCAGGTTTGAAGAGATGGGATCCAGACACCTCCTAAGCCTCTTGTTTTCAAATTTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CAA 90 bp | CTGCTTTTCATATACGGCCACTTTAGACAGACTCGTGTTCAAATATaGGCTCCACTGTTTTGCCTATACCTTGGTCAAATTACTTCACCT | + |
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Preference number: 6 (lower is better) Translates to: LLFIYGHFRQTRVQI*APLFCLYLGQITSP Trigger: AGGTGAAGTAATTTGACCAAGGTATAGGCAAAACAGTGGAGCCAATATTTGAACACGAGTCTGTCTAAAGTGGCCGTATATGAAAAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CAA 72 bp | ATATACGGCCACTTTAGACAGACTCGTGTTCAAATATaGGCTCCACTGTTTTGCCTATACCTTGGTCAAATT | + |
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Preference number: 6 (lower is better) Translates to: IYGHFRQTRVQI*APLFCLYLGQI Trigger: AATTTGACCAAGGTATAGGCAAAACAGTGGAGCCAATATTTGAACACGAGTCTGTCTAAAGTGGCCGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CAA 90 bp | GACAGACTCGTGTTCAAATATTGGCTCCACTGTTTTGCCTATACCTaGGTCAAATTACTTCACCTTTTTAAGGCTGTTTCTCATCTTATA | + |
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Preference number: 6 (lower is better) Translates to: DRLVFKYWLHCFAYT*VKLLHLFKAVSHLI Trigger: TATAAGATGAGAAACAGCCTTAAAAAGGTGAAGTAATTTGACCAAGGTATAGGCAAAACAGTGGAGCCAATATTTGAACACGAGTCTGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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| CDS CCA 72 bp | TGTTCAAATATTGGCTCCACTGTTTTGCCTATACCTTaGTCAAATTACTTCACCTTTTTAAGGCTGTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CSNIGSTVLPIP*SNYFTFLRLFL Trigger: GAGAAACAGCCTTAAAAAGGTGAAGTAATTTGACCAAGGTATAGGCAAAACAGTGGAGCCAATATTTGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507056.1 |
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