Pregenerated sensors for LINC01230 (Homo sapiens)
Ensembl gene IDs: ENSG00000281769Ensembl transcript IDs: ENST00000625222.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTCCGCCCGGACTCTGCGCGGACGGCCCGGCTTAGAGGCCCAGCCTaGCAGAGGCGGGTTGGAGTGCGGATCCGCCCCTCCCTGGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LRPDSARTARLRGPA*QRRVGVRIRPSLAG Trigger: CCCGGCCAGGGAGGGGCGGATCCGCACTCCAACCCGCCTCTGTCAGGCTGGGCCTCTAAGCCGGGCCGTCCGCGCAGAGTCCGGGCGGAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | GGCCGGCGGGAATCCTCGCCTTCCACCTGCAGCCTAAGTCGCCTGTaGCTAAGTCAACCTGCCGCCAGCGCCCAGGGTGGCGACCGGCAT | + |
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Preference number: 5 (lower is better) Translates to: GRRESSPSTCSLSRL*LSQPAASAQGGDRH Trigger: ATGCCGGTCGCCACCCTGGGCGCTGGCGGCAGGTTGACTTAGCCACAGGCGACTTAGGCTGCAGGTGGAAGGCGAGGATTCCCGCCGGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | AGAGGCGGGTTGGAGTGCGGATCCGCCCCTCCCTGGCCGGGACAGTaGGGAGGTCCCTTAACCCTCCTCTGCGCCTCGCTTTCCCCAACT | + |
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Preference number: 5 (lower is better) Translates to: RGGLECGSAPPWPGQ*GGPLTLLCASLSPT Trigger: AGTTGGGGAAAGCGAGGCGCAGAGGAGGGTTAAGGGACCTCCTCACTGTCCCGGCCAGGGAGGGGCGGATCCGCACTCCAACCCGCCTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CGCGTAGCCACACGGGCTCGGATCCCATTCGAGGGTCCCGACTTCTaGAGCCCCGCCCTGCCCCTTCCCACTTCGCTCCCAGAGCTAATC | + |
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Preference number: 5 (lower is better) Translates to: RVATRARIPFEGPDF*SPALPLPTSLPELI Trigger: GATTAGCTCTGGGAGCGAAGTGGGAAGGGGCAGGGCGGGGCTGCAGAAGTCGGGACCCTCGAATGGGATCCGAGCCCGTGTGGCTACGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | TCCCCAACTGCAGAATGGAGGCCACCTAAGAGGAGGCGACGCGCGTaGACGCCCCGGCACGGTGACCCGCCCACACTGAGCATTCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: SPTAEWRPPKRRRRA*TPRHGDPPTLSIQC Trigger: GCACTGAATGCTCAGTGTGGGCGGGTCACCGTGCCGGGGCGTCCACGCGCGTCGCCTCCTCTTAGGTGGCCTCCATTCTGCAGTTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CTTGGCTGTGGCTCCTCCAGAGCCGGCCTCGAAGGCACCTCCTTCTaGGGAAAGCCGCTCAGCGTTGCACCGTCTCACGACTTCCACCGG | + |
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Preference number: 5 (lower is better) Translates to: LGCGSSRAGLEGTSF*GKPLSVAPSHDFHR Trigger: CCGGTGGAAGTCGTGAGACGGTGCAACGCTGAGCGGCTTTCCGCAGAAGGAGGTGCCTTCGAGGCCGGCTCTGGAGGAGCCACAGCCAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | ACCTGCCGCCAGCGCCCAGGGTGGCGACCGGCATTTGAAAACGTCTaGGCATCCCGAGAGAAGTGCTTTGCTGTGGCCGGCTTGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: TCRQRPGWRPAFENV*ASREKCFAVAGLAV Trigger: CACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTTCAAATGCCGGTCGCCACCCTGGGCGCTGGCGGCAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | CCCCAGTGCTTCCTGGAGGACCTCAGCCCGTGGGTCCCAGCGGGGTaGGCTCGGAATTGTTTCCTCCCTAGCTCTCAACCCTCACCTCTA | + |
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Preference number: 5 (lower is better) Translates to: PQCFLEDLSPWVPAG*ARNCFLPSSQPSPL Trigger: TAGAGGTGAGGGTTGAGAGCTAGGGAGGAAACAATTCCGAGCCCACCCCGCTGGGACCCACGGGCTGAGGTCCTCCAGGAAGCACTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | TCTGAGCATCCCGAGAGAAGTGCTTTGCTGTGGCCGGCTTGGCTGTaGCTCCTCCAGAGCCGGCCTCGAAGGCACCTCCTTCTGCGGAAA | + |
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Preference number: 5 (lower is better) Translates to: SEHPERSALLWPAWL*LLQSRPRRHLLLRK Trigger: TTTCCGCAGAAGGAGGTGCCTTCGAGGCCGGCTCTGGAGGAGCCACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | ATAGGGAAAGCTGAGCCCCAGTGCTTCCTGGAGGACCTCAGCCCGTaGGTCCCAGCGGGGTGGGCTCGGAATTGTTTCCTCCCTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: IGKAEPQCFLEDLSP*VPAGWARNCFLPSS Trigger: AGAGCTAGGGAGGAAACAATTCCGAGCCCACCCCGCTGGGACCCACGGGCTGAGGTCCTCCAGGAAGCACTGGGGCTCAGCTTTCCCTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | AAAACGTCTGAGCATCCCGAGAGAAGTGCTTTGCTGTGGCCGGCTTaGCTGTGGCTCCTCCAGAGCCGGCCTCGAAGGCACCTCCTTCTG | + |
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Preference number: 5 (lower is better) Translates to: KTSEHPERSALLWPA*LWLLQSRPRRHLLL Trigger: CAGAAGGAGGTGCCTTCGAGGCCGGCTCTGGAGGAGCCACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | CGGCATTTGAAAACGTCTGAGCATCCCGAGAGAAGTGCTTTGCTGTaGCCGGCTTGGCTGTGGCTCCTCCAGAGCCGGCCTCGAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: RHLKTSEHPERSALL*PAWLWLLQSRPRRH Trigger: GTGCCTTCGAGGCCGGCTCTGGAGGAGCCACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTTCAAATGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | CACAGCCAGTCCGGGAGGGCCCGGCCAAAGCGTGCCTTGAAAACTTaGTTGAAAGGCGAGGGCTCAAGGAATTCAGCTCCCCTCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: HSQSGRARPKRALKT*LKGEGSRNSAPLLR Trigger: CCTCAAGAGGGGAGCTGAATTCCTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGACTGGCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CTGGAGGTAGCAGCACAGCCAGTCCGGGAGGGCCCGGCCAAAGCGTaGCTTGAAAACTTGATTGAAAGGCGAGGGCTCAAGGAATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LEVAAQPVREGPAKA*LENLIERRGLKEFS Trigger: GCTGAATTCCTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGACTGGCTGTGCTGCTACCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | ATGAGGACAGCAGGTCTTCACAGGTTAGGAGTTCGGTACAGACGTTaGTTTCCTCTGGAGGTAGCAGCACAGCCAGTCCGGGAGGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: MRTAGLHRLGVRYRR*FPLEVAAQPVREGP Trigger: CGGGCCCTCCCGGACTGGCTGTGCTGCTACCTCCAGAGGAAATCAACGTCTGTACCGAACTCCTAACCTGTGAAGACCTGCTGTCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CTACATTTCAGCCTTTGCAAACAGGCTTCTGCCCCGCGACGTGTATaGAAACTACAAACCCCCACCACCGCTGGCCGTGTGTGCATGCGG | + |
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Preference number: 5 (lower is better) Translates to: LHFSLCKQASAPRRV*KLQTPTTAGRVCMR Trigger: CCGCATGCACACACGGCCAGCGGTGGTGGGGGTTTGTAGTTTGCATACACGTCGCGGGGCAGAAGCCTGTTTGCAAAGGCTGAAATGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | CACCCTGTATCCCTTCCCTTTCTGGCGCTGCTCAGACCCACCCGGTaGGAATCTCTCTTTGGGCGAGTCACGTATGGGAACCTCAACAAG | + |
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Preference number: 5 (lower is better) Translates to: HPVSLPFLALLRPTR*ESLFGRVTYGNLNK Trigger: CTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGAAGGGATACAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CATCTTGCCCATCTCCACGTGCCCCACCCTCCCTACACACCCGTCTaGGGCACAGGGGAACCAGCAGCTGTAATCATAACTCAGTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: HLAHLHVPHPPYTPV*GTGEPAAVIITQLN Trigger: ATTCAACTGAGTTATGATTACAGCTGCTGGTTCCCCTGTGCCGCAGACGGGTGTGTAGGGAGGGTGGGGCACGTGGAGATGGGCAAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | GGGTACAATAAACCACGCTGGCTGAGGCCAAATGGGAGATGGGACTaGAGGTCCCAGCGTAGGCAGAGAACAAGGCCCTCAGAATGTTCC | + |
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Preference number: 5 (lower is better) Translates to: GYNKPRWLRPNGRWD*RSQRRQRTRPSECS Trigger: GGAACATTCTGAGGGCCTTGTTCTCTGCCTACGCTGGGACCTGCAGTCCCATCTCCCATTTGGCCTCAGCCAGCGTGGTTTATTGTACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | CGTCTTCCCCTGCTAGCTACATTTCAGCCTTTGCAAACAGGCTTCTaGCCCGCGACGTGTATGCAAACTACAAACCCCCACCACCGCTGG | + |
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Preference number: 5 (lower is better) Translates to: RLPLLATFQPLQTGF*PATCMQTTNPHHRW Trigger: CCAGCGGTGGTGGGGGTTTGTAGTTTGCATACACGTCGCGGGGCAGAAGCCTGTTTGCAAAGGCTGAAATGTAGCTAGCAGGGGAAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | TTACAAAGTACCATTCGGAGTCCCTCTTGTAAATTACAAAGCAACTaGGCCGCTGTTGACTCAGCCCGTGGAGCTCGGCCGGCGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: LQSTIRSPSCKLQSN*AAVDSARGARPAGL Trigger: GAGCCCCGCCGGCCGAGCTCCACGGGCTGAGTCAACAGCGGCCCAGTTGCTTTGTAATTTACAAGAGGGACTCCGAATGGTACTTTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | GCGTGGACGCCCCGGCACGGTGACCCGCCCACACTGAGCATTCAGTaGTTGCGCGTAATTTGTATCATTTTTGTGGTTGTTTCAACTCCG | + |
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Preference number: 5 (lower is better) Translates to: AWTPRHGDPPTLSIQ*LRVICIIFVVVSTP Trigger: CGGAGTTGAAACAACCACAAAAATGATACAAATTACGCGCAAGCACTGAATGCTCAGTGTGGGCGGGTCACCGTGCCGGGGCGTCCACGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | GCTCAGACCCACCCGGTGAGAATCTCTCTTTGGGCGAGTCACGTATaGGAACCTCAACAAGAAAAGAAGGAGGCCCAGCACTTTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: AQTHPVRISLWASHV*EPQQEKKEAQHFGR Trigger: CCTCCCAAAGTGCTGGGCCTCCTTCTTTTCTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | TCCCTTTCTGGCGCTGCTCAGACCCACCCGGTGAGAATCTCTCTTTaGGCGAGTCACGTATGGGAACCTCAACAAGAAAAGAAGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: SLSGAAQTHPVRISL*ASHVWEPQQEKKEA Trigger: GGCCTCCTTCTTTTCTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | GGATTTGGGTACAATAAACCACGCTGGCTGAGGCCAAATGGGAGATaGGACTGCAGGTCCCAGCGTAGGCAGAGAACAAGGCCCTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: GFGYNKPRWLRPNGR*DCRSQRRQRTRPSE Trigger: TTCTGAGGGCCTTGTTCTCTGCCTACGCTGGGACCTGCAGTCCCATCTCCCATTTGGCCTCAGCCAGCGTGGTTTATTGTACCCAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 90 bp | TGCATAAGGAGGAAACAAGCGGGATTTGGGTACAATAAACCACGCTaGCTGAGGCCAAATGGGAGATGGGACTGCAGGTCCCAGCGTAGG | + |
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Preference number: 5 (lower is better) Translates to: CIRRKQAGFGYNKPR*LRPNGRWDCRSQRR Trigger: CCTACGCTGGGACCTGCAGTCCCATCTCCCATTTGGCCTCAGCCAGCGTGGTTTATTGTACCCAAATCCCGCTTGTTTCCTCCTTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 90 bp | CCCTCTCTTAAAAGGGGTCAGGCCGTGACTGAGGACCTGGTGAGGTaGGGAAACAGAAGTCCTTTGCCTTGTAAACCGACACCAAATTAC | + |
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Preference number: 5 (lower is better) Translates to: PSLKRGQAVTEDLVR*GNRSPLPCKPTPNY Trigger: GTAATTTGGTGTCGGTTTACAAGGCAAAGGACTTCTGTTTCCTCACCTCACCAGGTCCTCAGTCACGGCCTGACCCCTTTTAAGAGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | AGCTGTTTGTTCCACTGGCTGGGTGATCTTGGTCAGTTAGTTTTCTaGGGCTCAGTTGCCTCAGTTGCCTCATCTGCAAAGGGGAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SCLFHWLGDLGQLVF*GSVASVASSAKGKE Trigger: CTCTTTCCCCTTTGCAGATGAGGCAACTGAGGCAACTGAGCCGCAGAAAACTAACTGACCAAGATCACCCAGCCAGTGGAACAAACAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 90 bp | GTAATCATAACTCAGTTGAATTACACTCAATCAATCCGCCCGGAATaGCTCCAGAGAATCGGGATCCCAGCAATTACTGGGAAGCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: VIITQLNYTQSIRPE*LQRIGIPAITGKRG Trigger: ACCTCGCTTCCCAGTAATTGCTGGGATCCCGATTCTCTGGAGGCATTCCGGGCGGATTGATTGAGTGTAATTCAACTGAGTTATGATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | GACTCTGCGCGGACGGCCCGGCTTAGAGGCCCAGCCTaGCAGAGGCGGGTTGGAGTGCGGATCCGCCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: DSARTARLRGPA*QRRVGVRIRPS Trigger: GGAGGGGCGGATCCGCACTCCAACCCGCCTCTGTCAGGCTGGGCCTCTAAGCCGGGCCGTCCGCGCAGAGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | TTGGAGTGCGGATCCGCCCCTCCCTGGCCGGGACAGTaGGGAGGTCCCTTAACCCTCCTCTGCGCCTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: LECGSAPPWPGQ*GGPLTLLCASL Trigger: AAGCGAGGCGCAGAGGAGGGTTAAGGGACCTCCTCACTGTCCCGGCCAGGGAGGGGCGGATCCGCACTCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | GGCTCCTCCAGAGCCGGCCTCGAAGGCACCTCCTTCTaGGGAAAGCCGCTCAGCGTTGCACCGTCTCACGAC | + |
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Preference number: 6 (lower is better) Translates to: GSSRAGLEGTSF*GKPLSVAPSHD Trigger: GTCGTGAGACGGTGCAACGCTGAGCGGCTTTCCGCAGAAGGAGGTGCCTTCGAGGCCGGCTCTGGAGGAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | GAGCATCCCGAGAGAAGTGCTTTGCTGTGGCCGGCTTaGCTGTGGCTCCTCCAGAGCCGGCCTCGAAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: EHPERSALLWPA*LWLLQSRPRRH Trigger: GTGCCTTCGAGGCCGGCTCTGGAGGAGCCACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | GAATCCTCGCCTTCCACCTGCAGCCTAAGTCGCCTGTaGCTAAGTCAACCTGCCGCCAGCGCCCAGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ESSPSTCSLSRL*LSQPAASAQGG Trigger: GCCACCCTGGGCGCTGGCGGCAGGTTGACTTAGCCACAGGCGACTTAGGCTGCAGGTGGAAGGCGAGGATTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | CACCTGCAGCCTAAGTCGCCTGTGGCTAAGTCAACCTaGCGCCAGCGCCCAGGGTGGCGACCGGCATTTGAA | + |
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Preference number: 6 (lower is better) Translates to: HLQPKSPVAKST*RQRPGWRPAFE Trigger: TTCAAATGCCGGTCGCCACCCTGGGCGCTGGCGGCAGGTTGACTTAGCCACAGGCGACTTAGGCTGCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | CAGCGCCCAGGGTGGCGACCGGCATTTGAAAACGTCTaGGCATCCCGAGAGAAGTGCTTTGCTGTGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: QRPGWRPAFENV*ASREKCFAVAG Trigger: GCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTTCAAATGCCGGTCGCCACCCTGGGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | GAGGATCGCTTGAGCCTGAGAAGTCGAGGCCGCAGGTaGGCCGAGATCGCGGCACTACACTCTAGCCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: EDRLSLRSRGRR*AEIAALHSSLR Trigger: CCTAAGGCTAGAGTGTAGTGCCGCGATCTCGGCGCACCTGCGGCCTCGACTTCTCAGGCTCAAGCGATCCTC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | CGTGCACAACAGCCCCACTGCTCTCTCCAGACATCTTaGCCATCTCCACGTGCCCCACCCTCCCTACACACC | + |
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Preference number: 6 (lower is better) Translates to: RAQQPHCSLQTS*PSPRAPPSLHT Trigger: GGTGTGTAGGGAGGGTGGGGCACGTGGAGATGGGCAAGATGTCTGGAGAGAGCAGTGGGGCTGTTGTGCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 90 bp | TGGCTAAGTCAACCTGCCGCCAGCGCCCAGGGTGGCGACCGGCATTaGAAAACGTCTGAGCATCCCGAGAGAAGTGCTTTGCTGTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: WLSQPAASAQGGDRH*KTSEHPERSALLWP Trigger: CGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTTCAAATGCCGGTCGCCACCCTGGGCGCTGGCGGCAGGTTGACTTAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | AACCTGCCGCCAGCGCCCAGGGTGGCGACCGGCATTTaGAAACGTCTGAGCATCCCGAGAGAAGTGCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: NLPPAPRVATGI*KRLSIPREVLC Trigger: GCAAAGCACTTCTCTCGGGATGCTCAGACGTTTTCAAATGCCGGTCGCCACCCTGGGCGCTGGCGGCAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | GCAGCACAGCCAGTCCGGGAGGGCCCGGCCAAAGCGTaGCTTGAAAACTTGATTGAAAGGCGAGGGCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: AAQPVREGPAKA*LENLIERRGLK Trigger: CTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGACTGGCTGTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | AAAACGTCTGAGCATCCCGAGAGAAGTGCTTTGCTGTaGCCGGCTTGGCTGTGGCTCCTCCAGAGCCGGCCT | + |
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Preference number: 6 (lower is better) Translates to: KTSEHPERSALL*PAWLWLLQSRP Trigger: AGGCCGGCTCTGGAGGAGCCACAGCCAAGCCGGCCACAGCAAAGCACTTCTCTCGGGATGCTCAGACGTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | GCGACGTGTATGCAAACTACAAACCCCCACCACCGCTaGCCGTGTGTGCATGCGGTTGGCAGGCTGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ATCMQTTNPHHR*PCVHAVGRLGF Trigger: AAAGCCCAGCCTGCCAACCGCATGCACACACGGCCAGCGGTGGTGGGGGTTTGTAGTTTGCATACACGTCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 90 bp | GCACAGCCAGTCCGGGAGGGCCCGGCCAAAGCGTGCCTTGAAAACTaGATTGAAAGGCGAGGGCTCAAGGAATTCAGCTCCCCTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: AQPVREGPAKACLEN*IERRGLKEFSSPLE Trigger: CTCAAGAGGGGAGCTGAATTCCTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGACTGGCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | TCCCTTCCCTTTCTGGCGCTGCTCAGACCCACCCGGTaGGAATCTCTCTTTGGGCGAGTCACGTATGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SLPFLALLRPTR*ESLFGRVTYGN Trigger: GTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | TCCGGGAGGGCCCGGCCAAAGCGTGCCTTGAAAACTTaGTTGAAAGGCGAGGGCTCAAGGAATTCAGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SGRARPKRALKT*LKGEGSRNSAP Trigger: GGGAGCTGAATTCCTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 72 bp | GTCCGGGAGGGCCCGGCCAAAGCGTGCCTTGAAAACTaGATTGAAAGGCGAGGGCTCAAGGAATTCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: VREGPAKACLEN*IERRGLKEFSS Trigger: GGAGCTGAATTCCTTGAGCCCTCGCCTTTCAATCAAGTTTTCAAGGCACGCTTTGGCCGGGCCCTCCCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | ATCTCTCTCACCCTGTATCCCTTCCCTTTCTGGCGCTaGTCAGACCCACCCGGTGAGAATCTCTCTTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: ISLTLYPFPFWR*SDPPGENLSLG Trigger: GCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGAAGGGATACAGGGTGAGAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | CCCCAAATCTCTCTCACCCTGTATCCCTTCCCTTTCTaGCGCTGCTCAGACCCACCCGGTGAGAATCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: PQISLTLYPFPF*RCSDPPGENLS Trigger: AGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGAAGGGATACAGGGTGAGAGAGATTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | ACCATTCGGAGTCCCTCTTGTAAATTACAAAGCAACTaGGCCGCTGTTGACTCAGCCCGTGGAGCTCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TIRSPSCKLQSN*AAVDSARGARP Trigger: CGGCCGAGCTCCACGGGCTGAGTCAACAGCGGCCCAGTTGCTTTGTAATTTACAAGAGGGACTCCGAATGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | GCAGGTCTTCACAGGTTAGGAGTTCGGTACAGACGTTaGTTTCCTCTGGAGGTAGCAGCACAGCCAGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AGLHRLGVRYRR*FPLEVAAQPVR Trigger: CCGGACTGGCTGTGCTGCTACCTCCAGAGGAAATCAACGTCTGTACCGAACTCCTAACCTGTGAAGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS TCA 72 bp | GAGCCTGGGCTCGAGCTGTTTGTTCCACTGGCTGGGTaGTCTTGGTCAGTTAGTTTTCTGCGGCTCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: EPGLELFVPLAG*SWSVSFLRLSC Trigger: GCAACTGAGCCGCAGAAAACTAACTGACCAAGATCACCCAGCCAGTGGAACAAACAGCTCGAGCCCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | GGCGCTGCTCAGACCCACCCGGTGAGAATCTCTCTTTaGGCGAGTCACGTATGGGAACCTCAACAAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: GAAQTHPVRISL*ASHVWEPQQEK Trigger: CTTTTCTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CCA 72 bp | TACAATAAACCACGCTGGCTGAGGCCAAATGGGAGATaGGACTGCAGGTCCCAGCGTAGGCAGAGAACAAGG | + |
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Preference number: 6 (lower is better) Translates to: YNKPRWLRPNGR*DCRSQRRQRTR Trigger: CCTTGTTCTCTGCCTACGCTGGGACCTGCAGTCCCATCTCCCATTTGGCCTCAGCCAGCGTGGTTTATTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 90 bp | TTCCCTTTCTGGCGCTGCTCAGACCCACCCGGTGAGAATCTCTCTTaGGGCGAGTCACGTATGGGAACCTCAACAAGAAAAGAAGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: FPFWRCSDPPGENLS*GESRMGTSTRKEGG Trigger: GCCTCCTTCTTTTCTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCAGAAAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | CTCCCTAGCTCTCAACCCTCACCTCTAGCAAAAACGTaGACAACAGCCCCACTGCTCTCTCCAGACATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPSSQPSPLAKT*TTAPLLSPDIL Trigger: CAAGATGTCTGGAGAGAGCAGTGGGGCTGTTGTGCACGTTTTTGCTAGAGGTGAGGGTTGAGAGCTAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 72 bp | TGGCGCTGCTCAGACCCACCCGGTGAGAATCTCTCTTaGGGCGAGTCACGTATGGGAACCTCAACAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: WRCSDPPGENLS*GESRMGTSTRK Trigger: TTTTCTTGTTGAGGTTCCCATACGTGACTCGCCCAAAGAGAGATTCTCACCGGGTGGGTCTGAGCAGCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 72 bp | AGCAGGTCTTCACAGGTTAGGAGTTCGGTACAGACGTaGATTTCCTCTGGAGGTAGCAGCACAGCCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SRSSQVRSSVQT*ISSGGSSTASP Trigger: CGGACTGGCTGTGCTGCTACCTCCAGAGGAAATCAACGTCTGTACCGAACTCCTAACCTGTGAAGACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | CCCCGGCACGGTGACCCGCCCACACTGAGCATTCAGTaGTTGCGCGTAATTTGTATCATTTTTGTGGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: PRHGDPPTLSIQ*LRVICIIFVVV Trigger: AACAACCACAAAAATGATACAAATTACGCGCAAGCACTGAATGCTCAGTGTGGGCGGGTCACCGTGCCGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | CTGCTAGCTACATTTCAGCCTTTGCAAACAGGCTTCTaGCCCGCGACGTGTATGCAAACTACAAACCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LLATFQPLQTGF*PATCMQTTNPH Trigger: GTGGGGGTTTGTAGTTTGCATACACGTCGCGGGGCAGAAGCCTGTTTGCAAAGGCTGAAATGTAGCTAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 72 bp | TTTCAGCGTCTTCCCCTGCTAGCTACATTTCAGCCTTaGCAAACAGGCTTCTGCCCCGCGACGTGTATGCAA | + |
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Preference number: 6 (lower is better) Translates to: FQRLPLLATFQP*QTGFCPATCMQ Trigger: TTGCATACACGTCGCGGGGCAGAAGCCTGTTTGCAAAGGCTGAAATGTAGCTAGCAGGGGAAGACGCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 90 bp | CCCGTCTGCGGCACAGGGGAACCAGCAGCTGTAATCATAACTCAGTaGAATTACACTCAATCAATCCGCCCGGAATGCCTCCAGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: PVCGTGEPAAVIITQ*NYTQSIRPECLQRI Trigger: GATTCTCTGGAGGCATTCCGGGCGGATTGATTGAGTGTAATTCAACTGAGTTATGATTACAGCTGCTGGTTCCCCTGTGCCGCAGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | TTCCACTGGCTGGGTGATCTTGGTCAGTTAGTTTTCTaGGGCTCAGTTGCCTCAGTTGCCTCATCTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: FHWLGDLGQLVF*GSVASVASSAK Trigger: CTTTGCAGATGAGGCAACTGAGGCAACTGAGCCGCAGAAAACTAACTGACCAAGATCACCCAGCCAGTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | TGGTCAGTTAGTTTTCTGCGGCTCAGTTGCCTCAGTTaGCTCATCTGCAAAGGGGAAAGAGTAGCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WSVSFLRLSCLS*LICKGERVAFL Trigger: AAGGAAGGCTACTCTTTCCCCTTTGCAGATGAGGCAACTGAGGCAACTGAGCCGCAGAAAACTAACTGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS GCA 72 bp | ACTCAGTTGAATTACACTCAATCAATCCGCCCGGAATaGCTCCAGAGAATCGGGATCCCAGCAATTACTGGG | + |
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Preference number: 6 (lower is better) Translates to: TQLNYTQSIRPE*LQRIGIPAITG Trigger: CCCAGTAATTGCTGGGATCCCGATTCTCTGGAGGCATTCCGGGCGGATTGATTGAGTGTAATTCAACTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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| CDS CAA 72 bp | CGGCACGGTGACCCGCCCACACTGAGCATTCAGTGCTaGCGCGTAATTTGTATCATTTTTGTGGTTGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RHGDPPTLSIQC*RVICIIFVVVS Trigger: TGAAACAACCACAAAAATGATACAAATTACGCGCAAGCACTGAATGCTCAGTGTGGGCGGGTCACCGTGCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000625222.1 |
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