Pregenerated sensors for LINC01208 (Homo sapiens)
Ensembl gene IDs: ENSG00000223715Ensembl transcript IDs: ENST00000421034.2, ENST00000428516.1, ENST00000434969.2, ENST00000652470.1, ENST00000657476.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CAGGAGCGGCCAGGCTCCTCCCCTCTGCAAATAACGCAAACTTCCTaGGCTCCACCCCAGTGTGCACTCCTCCCAGTGCACAGGCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: QERPGSSPLQITQTS*APPQCALLPVHRPV Trigger: GACTGGCCTGTGCACTGGGAGGAGTGCACACTGGGGTGGAGCTCAGGAAGTTTGCGTTATTTGCAGAGGGGAGGAGCCTGGCCGCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 90 bp | TGTCTCATTGGGTGCAGTGATCCAATCCATAAAGCCTCAGCTCCCTaGTGTCATACAGGAGGCCTGACCGTCAGTTTCCTGAGGATGATC | + |
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Preference number: 5 (lower is better) Translates to: CLIGCSDPIHKASAP*CHTGGLTVSFLRMI Trigger: GATCATCCTCAGGAAACTGACGGTCAGGCCTCCTGTATGACACCAGGGAGCTGAGGCTTTATGGATTGGATCACTGCACCCAATGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 90 bp | CCTGGTGACTCAGTCACTGTCTCTATTCTCCAGGTGGTGACGATCTaGGCCTCATCCGTACCCTCCATTTTGGTTCTTGTTAAGGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: PGDSVTVSILQVVTI*ASSVPSILVLVKGL Trigger: TAGCCCCTTAACAAGAACCAAAATGGAGGGTACGGATGAGGCTCAGATCGTCACCACCTGGAGAATAGAGACAGTGACTGAGTCACCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 90 bp | AAAAAGGAAAACAGGAACTCTCAGCAAAGTGAGAGCCCTGCTAGATaGTTTCCCACCTCACAGACTGAATCCCAGGTACCACCTGGAACA | + |
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Preference number: 5 (lower is better) Translates to: KKENRNSQQSESPAR*FPTSQTESQVPPGT Trigger: TGTTCCAGGTGGTACCTGGGATTCAGTCTGTGAGGTGGGAAACCATCTAGCAGGGCTCTCACTTTGCTGAGAGTTCCTGTTTTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 90 bp | ACAGATTTCCTGGTGACTCAGTCACTGTCTCTATTCTCCAGGTGGTaGCGATCTGAGCCTCATCCGTACCCTCCATTTTGGTTCTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: TDFLVTQSLSLFSRW*RSEPHPYPPFWFLL Trigger: TAACAAGAACCAAAATGGAGGGTACGGATGAGGCTCAGATCGTCACCACCTGGAGAATAGAGACAGTGACTGAGTCACCAGGAAATCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 90 bp | AGTTTTGGGAGGTCACAGGTTTGCCCATTTCCATTCATAGACTACTaGGTCTACTGCCAACAGGTAAGCCCTCGAACCTTAGATATAGTC | + |
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Preference number: 5 (lower is better) Translates to: SFGRSQVCPFPFIDY*VYCQQVSPRTLDIV Trigger: GACTATATCTAAGGTTCGAGGGCTTACCTGTTGGCAGTAGACCCAGTAGTCTATGAATGGAAATGGGCAAACCTGTGACCTCCCAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 90 bp | AGCAGACCACCAAACAGTGACCATGACCTTTCTTTGGTGCAAATTTaGCTTTGGGAAATGCTTTGGAGCCTCTTCTTGATTCAGCTACTG | + |
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Preference number: 5 (lower is better) Translates to: SRPPNSDHDLSLVQI*LWEMLWSLFLIQLL Trigger: CAGTAGCTGAATCAAGAAGAGGCTCCAAAGCATTTCCCAAAGCCAAATTTGCACCAAAGAAAGGTCATGGTCACTGTTTGGTGGTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS GCA 90 bp | AGGTCACAGGTTTGCCCATTTCCATTCATAGACTACTGGGTCTACTaGCAACAGGTAAGCCCTCGAACCTTAGATATAGTCATGCAAATT | + |
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Preference number: 5 (lower is better) Translates to: RSQVCPFPFIDYWVY*QQVSPRTLDIVMQI Trigger: AATTTGCATGACTATATCTAAGGTTCGAGGGCTTACCTGTTGGCAGTAGACCCAGTAGTCTATGAATGGAAATGGGCAAACCTGTGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 90 bp | CATTGGTTATGTGATGTGCAGTCAGACCTTGTCATAAAGAAAAACTaGACCCTTCTGTTGACCAATGCCAGCTGCAGGCATTGCAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: HWLCDVQSDLVIKKN*TLLLTNASCRHCSF Trigger: AAAACTGCAATGCCTGCAGCTGGCATTGGTCAACAGAAGGGTCCAGTTTTTCTTTATGACAAGGTCTGACTGCACATCACATAACCAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 90 bp | ATGCACTGCCAATCCACACTCAGCCAGGCTGTTTCTGAAAAATGCTaGTGTGAATACACCCTTCAATATTTCTTCCACGCTGACTATACA | + |
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Preference number: 5 (lower is better) Translates to: MHCQSTLSQAVSEKC*CEYTLQYFFHADYT Trigger: TGTATAGTCAGCGTGGAAGAAATATTGAAGGGTGTATTCACACCAGCATTTTTCAGAAACAGCCTGGCTGAGTGTGGATTGGCAGTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS GCA 90 bp | TTCCCTTGGCCCAAAACTGTATCTTCTTCCCGGCTGTTGTTACTCTaGCTCTTCCTCGATCTGTTTCTTGTTCTGGTTTTAACATCATAT | + |
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Preference number: 5 (lower is better) Translates to: FPWPKTVSSSRLLLL*LFLDLFLVLVLTSY Trigger: ATATGATGTTAAAACCAGAACAAGAAACAGATCGAGGAAGAGGCAGAGTAACAACAGCCGGGAAGAAGATACAGTTTTGGGCCAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS GCA 90 bp | ATTATGCACTGCCAATCCACACTCAGCCAGGCTGTTTCTGAAAAATaGTGGTGTGAATACACCCTTCAATATTTCTTCCACGCTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: IMHCQSTLSQAVSEK*WCEYTLQYFFHADY Trigger: ATAGTCAGCGTGGAAGAAATATTGAAGGGTGTATTCACACCAGCATTTTTCAGAAACAGCCTGGCTGAGTGTGGATTGGCAGTGCATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 90 bp | AACATTTATTTCCATCACGTTTATTTCCCTCTTATACTGAGAATGTaGTCAGAGTCCTACTCAGCCTTGTACCTGCAGAGCTTAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: NIYFHHVYFPLILRM*SESYSALYLQSLAP Trigger: TGGGGCTAAGCTCTGCAGGTACAAGGCTGAGTAGGACTCTGACCACATTCTCAGTATAAGAGGGAAATAAACGTGATGGAAATAAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS CCA 90 bp | ATTTCACATCTGCTTGACAAATATGCTAATGAAGCTCTTTTCCCTTaGCCCAAAACTGTATCTTCTTCCCGGCTGTTGTTACTCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: ISHLLDKYANEALFP*PKTVSSSRLLLLCL Trigger: GAGGCAGAGTAACAACAGCCGGGAAGAAGATACAGTTTTGGGCCAAGGGAAAAGAGCTTCATTAGCATATTTGTCAAGCAGATGTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS CCA 90 bp | GCATTTCTTTCTCTGCGGGTACAGACCAGTGTATATGTGTCCATTTaGCTGGTTTTCCATTATGGCCGACTAGTGAATGCTAAGATTTCA | + |
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Preference number: 5 (lower is better) Translates to: AFLSLRVQTSVYVSI*LVFHYGRLVNAKIS Trigger: TGAAATCTTAGCATTCACTAGTCGGCCATAATGGAAAACCAGCCAAATGGACACATATACACTGGTCTGTACCCGCAGAGAAAGAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS GCA 90 bp | GGCACCCACTTACTGAGCTTTTTCACCTTTCCAATTTGCTTCAAATaGCAAATGATCATAGAACAGTCGACATTGAGTTCTTCCCCAACT | + |
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Preference number: 5 (lower is better) Translates to: GTHLLSFFTFPICFK*QMIIEQSTLSSSPT Trigger: AGTTGGGGAAGAACTCAATGTCGACTGTTCTATGATCATTTGGCATTTGAAGCAAATTGGAAAGGTGAAAAAGCTCAGTAAGTGGGTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 90 bp | CAAATGTGGTTATGTTCAGATGCCCTGAAGGATTATTTTCCAATTTaGGGATATGCTCTTCTCGAGGACACATTGATGACTGAGTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: QMWLCSDALKDYFPI*GYALLEDTLMTELP Trigger: AGGCAACTCAGTCATCAATGTGTCCTCGAGAAGAGCATATCCCCAAATTGGAAAATAATCCTTCAGGGCATCTGAACATAACCACATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421034.2 ENST00000657476.1 |
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| CDS CCA 90 bp | CCTGACCGTCAGTTTCCTGAGGATGATCTACAAAGCCAGTTCAGCTaGCTCTTCAGCACTGTATTAAAAATACTCTTAGTTAGTAGTTGT | + |
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Preference number: 5 (lower is better) Translates to: PDRQFPEDDLQSQFS*LFSTVLKILLVSSC Trigger: ACAACTACTAACTAAGAGTATTTTTAATACAGTGCTGAAGAGCCAGCTGAACTGGCTTTGTAGATCATCCTCAGGAAACTGACGGTCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 90 bp | CATTCCATAACATTTATTTCCATCACGTTTATTTCCCTCTTATACTaGGAATGTGGTCAGAGTCCTACTCAGCCTTGTACCTGCAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: HSITFISITFISLLY*ECGQSPTQPCTCRA Trigger: AGCTCTGCAGGTACAAGGCTGAGTAGGACTCTGACCACATTCTCAGTATAAGAGGGAAATAAACGTGATGGAAATAAATGTTATGGAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS CCA 90 bp | GGCAGTCATCATGATCAAGTCAGCTTCATCTGTGAGATGCAGGGCTaGTCCAACATACACAAATCAATAAATGTAATCCATCACATAAAC | + |
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Preference number: 5 (lower is better) Translates to: GSHHDQVSFICEMQG*SNIHKSINVIHHIN Trigger: GTTTATGTGATGGATTACATTTATTGATTTGTGTATGTTGGACCAGCCCTGCATCTCACAGATGAAGCTGACTTGATCATGATGACTGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000652470.1 |
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| CDS CCA 90 bp | GGATGTACGAGTGAATTGAATGCTGGAACATGTTTTAAAACATGTTaGGACTGTGATGCTGAATTAAACTACAGCTGGGTTCTTTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: GCTSELNAGTCFKTC*DCDAELNYSWVLCV Trigger: CACACAAAGAACCCAGCTGTAGTTTAATTCAGCATCACAGTCCCAACATGTTTTAAAACATGTTCCAGCATTCAATTCACTCGTACATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS TCA 90 bp | TTTCTCCTTAGTTCAGCTAAAAGTCATGTTCTTGTCACATGGCCATaGAATACTAGGCTCACAGACACTTTGAAGGGTGAGAAAAATAGA | + |
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Preference number: 5 (lower is better) Translates to: FLLSSAKSHVLVTWP*NTRLTDTLKGEKNR Trigger: TCTATTTTTCTCACCCTTCAAAGTGTCTGTGAGCCTAGTATTTCATGGCCATGTGACAAGAACATGACTTTTAGCTGAACTAAGGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 90 bp | AGTCTTATTCTATTCAGACAACTGCTTCACAAAGTAAGCCAAATGTaGTTATGTTCAGATGCCCTGAAGGATTATTTTCCAATTTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SLILFRQLLHKVSQM*LCSDALKDYFPIWG Trigger: TCCCCAAATTGGAAAATAATCCTTCAGGGCATCTGAACATAACCACATTTGGCTTACTTTGTGAAGCAGTTGTCTGAATAGAATAAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421034.2 ENST00000657476.1 |
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| CDS TCA 90 bp | TTGTGTATCAGTTTAGTATTGCTTCACGAGTCCCACCTTTCTCTTTaGATGCACTTTACTGACTTCTTATTGGTTTTCTTGCAATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LCISLVLLHESHLSL*MHFTDFLLVFLQFE Trigger: TTCAAATTGCAAGAAAACCAATAAGAAGTCAGTAAAGTGCATTCAAAGAGAAAGGTGGGACTCGTGAAGCAATACTAAACTGATACACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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| CDS GCA 90 bp | ACCTTTCTCTTTGAATGCACTTTACTGACTTCTTATTGGTTTTCTTaGAATTTGAATGGTGAACATAACCATCAGTCCTCTACAGACTTT | + |
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Preference number: 5 (lower is better) Translates to: TFLFECTLLTSYWFS*NLNGEHNHQSSTDF Trigger: AAAGTCTGTAGAGGACTGATGGTTATGTTCACCATTCAAATTGCAAGAAAACCAATAAGAAGTCAGTAAAGTGCATTCAAAGAGAAAGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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| CDS GCA 72 bp | CTTCCTGAGCTCCACCCCAGTGTGCACTCCTCCCAGTaGACAGGCCAGTCAGAGGTTCTGCCAGGGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LPELHPSVHSSQ*TGQSEVLPGGP Trigger: AGGGCCCCCTGGCAGAACCTCTGACTGGCCTGTGCACTGGGAGGAGTGCACACTGGGGTGGAGCTCAGGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | GGAGCTAGGAAGAGGGTTGGTTCGACAGGCAGCAGGTGTGTCTCATaGGGTGCAGTGATCCAATCCATAAAGCCTCAGCTCCCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GARKRVGSTGSRCVS*GAVIQSIKPQLPGV Trigger: GACACCAGGGAGCTGAGGCTTTATGGATTGGATCACTGCACCCAATGAGACACACCTGCTGCCTGTCGAACCAACCCTCTTCCTAGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 72 bp | TCCTACTCAGCCTTGTACCTGCAGAGCTTAGCCCCATaGCTGGCACCCAGCAGACAATCAAATAGTGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SYSALYLQSLAP*LAPSRQSNSVG Trigger: TCCAACACTATTTGATTGTCTGCTGGGTGCCAGTCATGGGGCTAAGCTCTGCAGGTACAAGGCTGAGTAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS CCA 72 bp | AACAGGAACTCTCAGCAAAGTGAGAGCCCTGCTAGATaGTTTCCCACCTCACAGACTGAATCCCAGGTACCA | + |
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Preference number: 6 (lower is better) Translates to: NRNSQQSESPAR*FPTSQTESQVP Trigger: TGGTACCTGGGATTCAGTCTGTGAGGTGGGAAACCATCTAGCAGGGCTCTCACTTTGCTGAGAGTTCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | CGATCTGAGCCTCATCCGTACCCTCCATTTTGGTTCTaGTTAAGGGGCTACTCACTCTATGCTACAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSEPHPYPPFWF*LRGYSLYATEA Trigger: AGCCTCTGTAGCATAGAGTGAGTAGCCCCTTAACAAGAACCAAAATGGAGGGTACGGATGAGGCTCAGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 72 bp | AGGTCACAGGTTTGCCCATTTCCATTCATAGACTACTaGGTCTACTGCCAACAGGTAAGCCCTCGAACCTTA | + |
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Preference number: 6 (lower is better) Translates to: RSQVCPFPFIDY*VYCQQVSPRTL Trigger: TAAGGTTCGAGGGCTTACCTGTTGGCAGTAGACCCAGTAGTCTATGAATGGAAATGGGCAAACCTGTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS CCA 72 bp | GCAGCAGACCACCAAACAGTGACCATGACCTTTCTTTaGTGCAAATTTGGCTTTGGGAAATGCTTTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: AADHQTVTMTFL*CKFGFGKCFGA Trigger: GGCTCCAAAGCATTTCCCAAAGCCAAATTTGCACCAAAGAAAGGTCATGGTCACTGTTTGGTGGTCTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | GGCAGCAGACCACCAAACAGTGACCATGACCTTTCTTaGGTGCAAATTTGGCTTTGGGAAATGCTTTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GSRPPNSDHDLS*VQIWLWEMLWS Trigger: GCTCCAAAGCATTTCCCAAAGCCAAATTTGCACCAAAGAAAGGTCATGGTCACTGTTTGGTGGTCTGCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | CTGGACCCTTCTGTTGACCAATGCCAGCTGCAGGCATaGCAGTTTTTGGTGCATTTCATCAATATGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LDPSVDQCQLQA*QFLVHFINMLS Trigger: GCTCAGCATATTGATGAAATGCACCAAAAACTGCAATGCCTGCAGCTGGCATTGGTCAACAGAAGGGTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | GATCAGACTGGCAGCAGACCACCAAACAGTGACCATGACCTTTCTTaGGTGCAAATTTGGCTTTGGGAAATGCTTTGGAGCCTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: DQTGSRPPNSDHDLS*VQIWLWEMLWSLFL Trigger: CAAGAAGAGGCTCCAAAGCATTTCCCAAAGCCAAATTTGCACCAAAGAAAGGTCATGGTCACTGTTTGGTGGTCTGCTGCCAGTCTGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | TTCCCTTGGCCCAAAACTGTATCTTCTTCCCGGCTGTaGTTACTCTGCCTCTTCCTCGATCTGTTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: FPWPKTVSSSRL*LLCLFLDLFLV Trigger: AACAAGAAACAGATCGAGGAAGAGGCAGAGTAACAACAGCCGGGAAGAAGATACAGTTTTGGGCCAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS CAA 72 bp | TTCTCTGCGGGTACAGACCAGTGTATATGTGTCCATTaGGCTGGTTTTCCATTATGGCCGACTAGTGAATGC | + |
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Preference number: 6 (lower is better) Translates to: FSAGTDQCICVH*AGFPLWPTSEC Trigger: GCATTCACTAGTCGGCCATAATGGAAAACCAGCCAAATGGACACATATACACTGGTCTGTACCCGCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS CAA 72 bp | GTGCATTCGTTAGCAGTTCCTGGGCCAAATGCATTGTaGATGTTGCGAGTTGTCTCTGCTGCTTTTAAACTC | + |
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Preference number: 6 (lower is better) Translates to: VHSLAVPGPNAL*MLRVVSAAFKL Trigger: GAGTTTAAAAGCAGCAGAGACAACTCGCAACATCAACAATGCATTTGGCCCAGGAACTGCTAACGAATGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | TCGGTGCATTCGTTAGCAGTTCCTGGGCCAAATGCATaGTTGATGTTGCGAGTTGTCTCTGCTGCTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: SVHSLAVPGPNA*LMLRVVSAAFK Trigger: TTTAAAAGCAGCAGAGACAACTCGCAACATCAACAATGCATTTGGCCCAGGAACTGCTAACGAATGCACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | TCAGACCTTGTCATAAAGAAAAACTGGACCCTTCTGTaGACCAATGCCAGCTGCAGGCATTGCAGTTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: SDLVIKKNWTLL*TNASCRHCSFW Trigger: CCAAAAACTGCAATGCCTGCAGCTGGCATTGGTCAACAGAAGGGTCCAGTTTTTCTTTATGACAAGGTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | GCGTCTCTATCCTGCAACCAGTACAGAGTGGGATTATaGCAATTGAAAATGAGACTGGCTCTCCTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ASLSCNQYRVGL*QLKMRLALLLL Trigger: AAGAAGCAGGAGAGCCAGTCTCATTTTCAATTGCAATAATCCCACTCTGTACTGGTTGCAGGATAGAGACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 72 bp | GCTGGTGAAGAAGGCTTTATTATATTATGGGCAATGTaGGCCAGAGAGACATTAGCCAAACCTCAAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGEEGFIILWAM*ARETLAKPQVL Trigger: GAGGACTTGAGGTTTGGCTAATGTCTCTCTGGCTCACATTGCCCATAATATAATAAAGCCTTCTTCACCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS GCA 72 bp | CCCAAAACTGTATCTTCTTCCCGGCTGTTGTTACTCTaGCTCTTCCTCGATCTGTTTCTTGTTCTGGTTTTA | + |
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Preference number: 6 (lower is better) Translates to: PKTVSSSRLLLL*LFLDLFLVLVL Trigger: TAAAACCAGAACAAGAAACAGATCGAGGAAGAGGCAGAGTAACAACAGCCGGGAAGAAGATACAGTTTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS GCA 72 bp | TGTCATAAAGAAAAACTGGACCCTTCTGTTGACCAATaGCAGCTGCAGGCATTGCAGTTTTTGGTGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: CHKEKLDPSVDQ*QLQALQFLVHF Trigger: GAAATGCACCAAAAACTGCAATGCCTGCAGCTGGCATTGGTCAACAGAAGGGTCCAGTTTTTCTTTATGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | TTTCCAATTTGGGGATATGCTCTTCTCGAGGACACATaGATGACTGAGTTGCCTAAGCTTCTCAGATGGCAT | + |
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Preference number: 6 (lower is better) Translates to: FPIWGYALLEDT*MTELPKLLRWH Trigger: ATGCCATCTGAGAAGCTTAGGCAACTCAGTCATCAATGTGTCCTCGAGAAGAGCATATCCCCAAATTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421034.2 ENST00000657476.1 |
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| CDS TCA 72 bp | CTTTTCTCCTCTCTTCCATATGAGGACACAGTTAAGTaGAAAGGCAGTCATCTAGTGTGTGGATTTGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LFSSLPYEDTVK*KGSHLVCGFAR Trigger: TCTGGCAAATCCACACACTAGATGACTGCCTTTTCACTTAACTGTGTCCTCATATGGAAGAGAGGAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS TCA 72 bp | AGTTCAGCTAAAAGTCATGTTCTTGTCACATGGCCATaGAATACTAGGCTCACAGACACTTTGAAGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SSAKSHVLVTWP*NTRLTDTLKGE Trigger: CTCACCCTTCAAAGTGTCTGTGAGCCTAGTATTTCATGGCCATGTGACAAGAACATGACTTTTAGCTGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS GCA 72 bp | AAGAAAAACTGGACCCTTCTGTTGACCAATGCCAGCTaGAGGCATTGCAGTTTTTGGTGCATTTCATCAATA | + |
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Preference number: 6 (lower is better) Translates to: KKNWTLLLTNAS*RHCSFWCISSI Trigger: TATTGATGAAATGCACCAAAAACTGCAATGCCTGCAGCTGGCATTGGTCAACAGAAGGGTCCAGTTTTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 72 bp | CTGCTTGACAAATATGCTAATGAAGCTCTTTTCCCTTaGCCCAAAACTGTATCTTCTTCCCGGCTGTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LLDKYANEALFP*PKTVSSSRLLL Trigger: TAACAACAGCCGGGAAGAAGATACAGTTTTGGGCCAAGGGAAAAGAGCTTCATTAGCATATTTGTCAAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428516.1 |
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| CDS CCA 72 bp | AGTGACCATGACCTTTCTTTGGTGCAAATTTGGCTTTaGGAAATGCTTTGGAGCCTCTTCTTGATTCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: SDHDLSLVQIWL*EMLWSLFLIQL Trigger: TAGCTGAATCAAGAAGAGGCTCCAAAGCATTTCCCAAAGCCAAATTTGCACCAAAGAAAGGTCATGGTCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | TTCTTGTTTAGTTGTAAGATGATCAGCTTCAATGATTGCTCTCAATaGCTCATTGTCAACTTCCAATTGCCGGCCACTACGCTCCTCATC | + |
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Preference number: 6 (lower is better) Translates to: FLFSCKMISFNDCSQ*LIVNFQLPATTLLI Trigger: GATGAGGAGCGTAGTGGCCGGCAATTGGAAGTTGACAATGAGCAATTGAGAGCAATCATTGAAGCTGATCATCTTACAACTAAACAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 72 bp | CTTTTCTCCTCTCTTCCATATGAGGACACAGTTAAGTaGAAAGGCAGTCATCATGATCAAGTCAGCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LFSSLPYEDTVK*KGSHHDQVSFI Trigger: GATGAAGCTGACTTGATCATGATGACTGCCTTTTCACTTAACTGTGTCCTCATATGGAAGAGAGGAGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000652470.1 |
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| CDS CAA 72 bp | AGGACTTTCTCCTTAGTTCAGCTAAAAGTCATGTTCTaGTCACATGGCCATGAAATACTAGGCTCACAGACA | + |
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Preference number: 6 (lower is better) Translates to: RTFSLVQLKVMF*SHGHEILGSQT Trigger: TGTCTGTGAGCCTAGTATTTCATGGCCATGTGACAAGAACATGACTTTTAGCTGAACTAAGGAGAAAGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | AAGGATTATTTTCCAATTTGGGGATATGCTCTTCTCGAGGACACATaGATGACTGAGTTGCCTAAGCTTCTCAGATGGCATTATCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: KDYFPIWGYALLEDT*MTELPKLLRWHYLS Trigger: TGACAGATAATGCCATCTGAGAAGCTTAGGCAACTCAGTCATCAATGTGTCCTCGAGAAGAGCATATCCCCAAATTGGAAAATAATCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421034.2 ENST00000657476.1 |
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| CDS CAA 90 bp | TACACAAACAAAACTTTCATATTAAAGTTTTGGGAGGTCACAGGTTaGCCCATTTCCATTCATAGACTACTGGGTCTACTGCCAACAGGT | + |
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Preference number: 6 (lower is better) Translates to: YTNKTFILKFWEVTG*PISIHRLLGLLPTG Trigger: ACCTGTTGGCAGTAGACCCAGTAGTCTATGAATGGAAATGGGCAAACCTGTGACCTCCCAAAACTTTAATATGAAAGTTTTGTTTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000657476.1 |
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| CDS CAA 90 bp | TGTGTCATGGACAACATTGATATTTTGATGAAGTACGGGGATCCTTaGTGTATCAGTTTAGTATTGCTTCACGAGTCCCACCTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CVMDNIDILMKYGDP*CISLVLLHESHLSL Trigger: AAGAGAAAGGTGGGACTCGTGAAGCAATACTAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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| CDS TCA 72 bp | ACTACAGCTGGGTTCTTTGTGTGTCATGGACAACATTaGTATTTTGATGAAGTACGGGGATCCTTTGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: TTAGFFVCHGQH*YFDEVRGSFVY Trigger: ATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACACAAAGAACCCAGCTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS TCA 72 bp | AGGCATTGCAGTTTTTGGTGCATTTCATCAATATGCTaGGCATACTTCTCAGATGTAATGGTTTTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RHCSFWCISSIC*AYFSDVMVLLG Trigger: TCCCAGCAAAACCATTACATCTGAGAAGTATGCTCAGCATATTGATGAAATGCACCAAAAACTGCAATGCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS TCA 72 bp | GTTCCCCCTCTCACAGAAAGCCAATCACTGAGACACTaGATATTGCTGGTGAAGAAGGCTTTATTATATTAT | + |
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Preference number: 6 (lower is better) Translates to: VPPLTESQSLRH*ILLVKKALLYY Trigger: ATAATATAATAAAGCCTTCTTCACCAGCAATATTCAGTGTCTCAGTGATTGGCTTTCTGTGAGAGGGGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 72 bp | TTATGTTCAGATGCCCTGAAGGATTATTTTCCAATTTaGGGATATGCTCTTCTCGAGGACACATTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: LCSDALKDYFPI*GYALLEDTLMT Trigger: AGTCATCAATGTGTCCTCGAGAAGAGCATATCCCCAAATTGGAAAATAATCCTTCAGGGCATCTGAACATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421034.2 ENST00000657476.1 |
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| CDS CCA 72 bp | CATGATCAAGTCAGCTTCATCTGTGAGATGCAGGGCTaGTCCAACATACACAAATCAATAAATGTAATCCAT | + |
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Preference number: 6 (lower is better) Translates to: HDQVSFICEMQG*SNIHKSINVIH Trigger: ATGGATTACATTTATTGATTTGTGTATGTTGGACCAGCCCTGCATCTCACAGATGAAGCTGACTTGATCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434969.2 ENST00000652470.1 |
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| CDS CAA 72 bp | GACAACATTGATATTTTGATGAAGTACGGGGATCCTTaGTGTATCAGTTTAGTATTGCTTCACGAGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: DNIDILMKYGDP*CISLVLLHESH Trigger: GTGGGACTCGTGAAGCAATACTAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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| CDS CAA 90 bp | AAACTACAGCTGGGTTCTTTGTGTGTCATGGACAACATTGATATTTaGATGAAGTACGGGGATCCTTTGTGTATCAGTTTAGTATTGCTG | + |
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Preference number: 6 (lower is better) Translates to: KLQLGSLCVMDNIDI*MKYGDPLCISLVLL Trigger: CAGCAATACTAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACACAAAGAACCCAGCTGTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS CAA 90 bp | AAACTACAGCTGGGTTCTTTGTGTGTCATGGACAACATTGATATTTaGATGAAGTACGGGGATCCTTTGTGTATCAGTTTAGTATTGCTC | + |
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Preference number: 6 (lower is better) Translates to: KLQLGSLCVMDNIDI*MKYGDPLCISLVLL Trigger: GAGCAATACTAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACACAAAGAACCCAGCTGTAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434969.2 |
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| CDS GCA 72 bp | AGCAAGCCAAATCAAATAAGAACAAGTTTTTCTGAATaGCTACTACTGTTCCAAGGAGCTAAGCTAGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SKPNQIRTSFSE*LLLFQGAKLDA Trigger: AGCATCTAGCTTAGCTCCTTGGAACAGTAGTAGGCATTCAGAAAAACTTGTTCTTATTTGATTTGGCTTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CCA 72 bp | ACATGTTGGGACTGTGATGCTGAATTAAACTACAGCTaGGTTCTTTGTGTGTCATGGACAACATTGATATTT | + |
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Preference number: 6 (lower is better) Translates to: TCWDCDAELNYS*VLCVSWTTLIF Trigger: AAATATCAATGTTGTCCATGACACACAAAGAACCCAGCTGTAGTTTAATTCAGCATCACAGTCCCAACATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS CAA 72 bp | CTGGGTTCTTTGTGTGTCATGGACAACATTGATATTTaGATGAAGTACGGGGATCCTTTGTGTATCAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LGSLCVMDNIDI*MKYGDPLCISL Trigger: TAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACACAAAGAACCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421034.2 ENST00000434969.2 ENST00000657476.1 |
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| CDS CAA 72 bp | CATAGAACAGTCGACATTGAGTTCTTCCCCAACTTCTaGTTTAGTTGTAAGATGATCAGCTTCAATGATTGC | + |
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Preference number: 6 (lower is better) Translates to: HRTVDIEFFPNF*FSCKMISFNDC Trigger: GCAATCATTGAAGCTGATCATCTTACAACTAAACAAGAAGTTGGGGAAGAACTCAATGTCGACTGTTCTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 72 bp | ATTTTAGTTGTAATGATACCAATTATCAGAAAGGCCTaGAAGGCACTACCCAGTTCGTGCCCACATAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ILVVMIPIIRKA*KALPSSCPHKD Trigger: ATCTTTATGTGGGCACGAACTGGGTAGTGCCTTCAAGGCCTTTCTGATAATTGGTATCATTACAACTAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | CCAAATGATCATAGAACAGTCGACATTGAGTTCTTCCCCAACTTCTaGTTTAGTTGTAAGATGATCAGCTTCAATGATTGCTCTCAATTG | + |
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Preference number: 6 (lower is better) Translates to: PNDHRTVDIEFFPNF*FSCKMISFNDCSQL Trigger: CAATTGAGAGCAATCATTGAAGCTGATCATCTTACAACTAAACAAGAAGTTGGGGAAGAACTCAATGTCGACTGTTCTATGATCATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS CAA 90 bp | AAACTACAGCTGGGTTCTTTGTGTGTCATGGACAACATTGATATTTaGATGAAGTACGGGGATCCTTTGTGTATCAGTTTAGTATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: KLQLGSLCVMDNIDI*MKYGDPLCISLVLL Trigger: AAGCAATACTAAACTGATACACAAAGGATCCCCGTACTTCATCAAAATATCAATGTTGTCCATGACACACAAAGAACCCAGCTGTAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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| CDS TCA 72 bp | GCAGACAATCAAATAGTGTTGGATGTACGAGTGAATTaGATGCTGGAACATGTTTTAAAACATGTTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: ADNQIVLDVRVN*MLEHVLKHVGT Trigger: AGTCCCAACATGTTTTAAAACATGTTCCAGCATTCAATTCACTCGTACATCCAACACTATTTGATTGTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000421034.2 |
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| CDS TCA 72 bp | AGCCCAATTTGTTCAATTTTTGAAGCATTGGTTATGTaGTGTGCAGTCAGACCTTGTCATAAAGAAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: SPICSIFEALVM*CAVRPCHKEKL Trigger: CAGTTTTTCTTTATGACAAGGTCTGACTGCACATCACATAACCAATGCTTCAAAAATTGAACAAATTGGGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000652470.1 |
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| CDS GCA 72 bp | TTTGAATGCACTTTACTGACTTCTTATTGGTTTTCTTaGAATTTGAATGGTGAACATAACCATCAGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: FECTLLTSYWFS*NLNGEHNHQSS Trigger: AGAGGACTGATGGTTATGTTCACCATTCAAATTGCAAGAAAACCAATAAGAAGTCAGTAAAGTGCATTCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657476.1 |
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