Pregenerated sensors for LINC01205 (Homo sapiens)
Ensembl gene IDs: ENSG00000228980Ensembl transcript IDs: ENST00000489670.1, ENST00000497996.1, ENST00000652897.1, ENST00000658412.1, ENST00000659474.1, ENST00000661437.1, ENST00000663929.1, ENST00000670331.1
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGGGCAACAGAGCAAGACCCTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGTGCAGACCTG | + |
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Preference number: 5 (lower is better) Translates to: RATEQDPCAKHYPRF*GCGLEWVGCSGADL Trigger: CAGGTCTGCACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGGGTCTTGCTCTGTTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652897.1 |
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| CDS CCA 90 bp | CGACAGAGCGAGATTCCGTCTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGTGCAGACCTG | + |
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Preference number: 5 (lower is better) Translates to: RQSEIPSCAKHYPRF*GCGLEWVGCSGADL Trigger: CAGGTCTGCACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGACGGAATCTCGCTCTGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661437.1 |
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| CDS CCA 90 bp | AGTTGGAAGAATTCTTCTGCGTTGATCTCACTGGGAGCTGCAGGCTaGAGCTGTTCCTATTGGGCCATCTTGCCAGCCACTCAGCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: SWKNSSALISLGAAG*SCSYWAILPATQQK Trigger: TTTTTGCTGAGTGGCTGGCAAGATGGCCCAATAGGAACAGCTCCAGCCTGCAGCTCCCAGTGAGATCAACGCAGAAGAATTCTTCCAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658412.1 ENST00000659474.1 ENST00000663929.1 |
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| CDS GCA 90 bp | CACAGGCTAGTGGAGGATTGTGGAAGGGAACAGGATAATTCCTCCTaGAAGGAGGTTATATTCAACTGGAGTTACATAGAACTAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HRLVEDCGREQDNSS*KEVIFNWSYIELKK Trigger: CTTCTTTAGTTCTATGTAACTCCAGTTGAATATAACCTCCTTGCAGGAGGAATTATCCTGTTCCCTTCCACAATCCTCCACTAGCCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661437.1 |
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| CDS CCA 90 bp | TCCCCTCTGGAGTTTGTGACAAGTAGGAACACAGCAAAGACAGCTTaGGAGAGAATTCAAAATATGAATCACTTTAATCCACACTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SPLEFVTSRNTAKTA*ERIQNMNHFNPHCS Trigger: AGAACAGTGTGGATTAAAGTGATTCATATTTTGAATTCTCTCCCAAGCTGTCTTTGCTGTGTTCCTACTTGTCACAAACTCCAGAGGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS CCA 90 bp | ATATTTCTGACTGTCTCACTGACACCATTAGTATTGAGTCAGTTGTaGTTCATCAGGAAAACAGAGACCACCCTGTGTATCATGGATCTT | + |
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Preference number: 5 (lower is better) Translates to: IFLTVSLTPLVLSQL*FIRKTETTLCIMDL Trigger: AAGATCCATGATACACAGGGTGGTCTCTGTTTTCCTGATGAACCACAACTGACTCAATACTAATGGTGTCAGTGAGACAGTCAGAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS TCA 90 bp | TCAAAACCTCCTTCAGTAACTTCCAGTCACAGCACATTTATGTGGTaGAATTGTGAAGAAAACCAAGGGAATTATAAACACCTTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: SKPPSVTSSHSTFMW*NCEENQGNYKHLVP Trigger: TGGCACAAGGTGTTTATAATTCCCTTGGTTTTCTTCACAATTTCACCACATAAATGTGCTGTGACTGGAAGTTACTGAAGGAGGTTTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659474.1 |
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| CDS CCA 72 bp | GAGCAAGACCCTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: EQDPCAKHYPRF*GCGLEWVGCSG Trigger: ACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGGGTCTTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652897.1 |
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| CDS CCA 72 bp | AATTCTTCTGCGTTGATCTCACTGGGAGCTGCAGGCTaGAGCTGTTCCTATTGGGCCATCTTGCCAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: NSSALISLGAAG*SCSYWAILPAT Trigger: AGTGGCTGGCAAGATGGCCCAATAGGAACAGCTCCAGCCTGCAGCTCCCAGTGAGATCAACGCAGAAGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000658412.1 ENST00000659474.1 ENST00000663929.1 |
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| CDS CAA 72 bp | GTGCCAAGCATTATCCTCGTTTCTGGGGATGTGGACTaGAATGGGTGGGGTGCAGTGGTGCAGACCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: VPSIILVSGDVD*NGWGAVVQTCS Trigger: ACTACAGGTCTGCACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000489670.1 ENST00000497996.1 ENST00000652897.1 ENST00000658412.1 ENST00000659474.1 ENST00000661437.1 ENST00000663929.1 ENST00000670331.1 |
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| CDS CCA 72 bp | GAGATTCCGTCTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: EIPSCAKHYPRF*GCGLEWVGCSG Trigger: ACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGACGGAATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661437.1 |
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| CDS GCA 72 bp | AGAACAGCTCCTAAGCTGAAACACAGATTCACTGTGTaGACAGCATCCACCCGAGTCTTCCTCCGCATCATC | + |
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Preference number: 6 (lower is better) Translates to: RTAPKLKHRFTV*TASTRVFLRII Trigger: GATGATGCGGAGGAAGACTCGGGTGGATGCTGTGCACACAGTGAATCTGTGTTTCAGCTTAGGAGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS CCA 72 bp | AAATGCCTACCTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: KCLPCAKHYPRF*GCGLEWVGCSG Trigger: ACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGGTAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000489670.1 |
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| CDS CCA 72 bp | AGGAAAGCAACTTGTGCCAAGCATTATCCTCGTTTCTaGGGATGTGGACTTGAATGGGTGGGGTGCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RKATCAKHYPRF*GCGLEWVGCSG Trigger: ACCACTGCACCCCACCCATTCAAGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGTTGCTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670331.1 |
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| CDS CCA 72 bp | CTTTGGTTCCCATCTAAAAGAGTGTTGGGTGCACAATaGACCTCAGGTGATCCTGCGGAAGAGCTCCCAATT | + |
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Preference number: 6 (lower is better) Translates to: LWFPSKRVLGAQ*TSGDPAEELPI Trigger: AATTGGGAGCTCTTCCGCAGGATCACCTGAGGTCCATTGTGCACCCAACACTCTTTTAGATGGGAACCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS CCA 72 bp | TGTAGAGGAGACTTTGGTTCCCATCTAAAAGAGTGTTaGGTGCACAATGGACCTCAGGTGATCCTGCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CRGDFGSHLKEC*VHNGPQVILRK Trigger: CTTCCGCAGGATCACCTGAGGTCCATTGTGCACCCAACACTCTTTTAGATGGGAACCAAAGTCTCCTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS TCA 72 bp | TTGCTAGCAGCCTACTTTTTAGAACAGCTCCTAAGCTaGAACACAGATTCACTGTGTGCACAGCATCCACCC | + |
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Preference number: 6 (lower is better) Translates to: LLAAYFLEQLLS*NTDSLCAQHPP Trigger: GGGTGGATGCTGTGCACACAGTGAATCTGTGTTTCAGCTTAGGAGCTGTTCTAAAAAGTAGGCTGCTAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS TCA 72 bp | GGAGGACATGATGCTGAGAAGCAGTTAACATCTGGATaGTTCACAGGGATAAGGAGATCAATTCTTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GGHDAEKQLTSG*FTGIRRSILPW Trigger: CCAAGGAAGAATTGATCTCCTTATCCCTGTGAATCATCCAGATGTTAACTGCTTCTCAGCATCATGTCCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663929.1 |
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| CDS CCA 72 bp | CCTAAAGCACTGAAGTGGTTGGTTGAAGGTCTTATCTaGAAGTTGCTGCAATTCTCTGGTGTCTCTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: PKALKWLVEGLI*KLLQFSGVSRK Trigger: CTTTCTAGAGACACCAGAGAATTGCAGCAACTTCCAGATAAGACCTTCAACCAACCACTTCAGTGCTTTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS CCA 72 bp | ACTGTCTCACTGACACCATTAGTATTGAGTCAGTTGTaGTTCATCAGGAAAACAGAGACCACCCTGTGTATC | + |
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Preference number: 6 (lower is better) Translates to: TVSLTPLVLSQL*FIRKTETTLCI Trigger: GATACACAGGGTGGTCTCTGTTTTCCTGATGAACCACAACTGACTCAATACTAATGGTGTCAGTGAGACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS CAA 72 bp | GGAAGGGGATTCTGGGATATACAGTTCCCAGTTTCTTaGCTGAAATGTAGAGGAGACTTTGGTTCCCATCTA | + |
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Preference number: 6 (lower is better) Translates to: GRGFWDIQFPVS*LKCRGDFGSHL Trigger: TAGATGGGAACCAAAGTCTCCTCTACATTTCAGCAAAGAAACTGGGAACTGTATATCCCAGAATCCCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS CAA 72 bp | GCACTGAAGTGGTTGGTTGAAGGTCTTATCTGGAAGTaGCTGCAATTCTCTGGTGTCTCTAGAAAGGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: ALKWLVEGLIWK*LQFSGVSRKVL Trigger: TAAGACCTTTCTAGAGACACCAGAGAATTGCAGCAACTTCCAGATAAGACCTTCAACCAACCACTTCAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS TCA 72 bp | CTGACCCAGGGGTTTTGTGTCTTCTGGCAACATCTTTaGAACTGTGGCAGCTACATTGTTAGATTTCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: LTQGFCVFWQHL*NCGSYIVRFQV Trigger: TACTTGAAATCTAACAATGTAGCTGCCACAGTTTCAAAGATGTTGCCAGAAGACACAAAACCCCTGGGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS TCA 72 bp | TCTGAAAGTCAAAGAAGTCATCTCAGCCTAAAGCACTaGAGTGGTTGGTTGAAGGTCTTATCTGGAAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SESQRSHLSLKH*SGWLKVLSGSC Trigger: GCAACTTCCAGATAAGACCTTCAACCAACCACTTCAGTGCTTTAGGCTGAGATGACTTCTTTGACTTTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS GCA 72 bp | GGTTTGTTACATAGGTATAGACATGCCATGGTGGTTTaGTGCACCCATCAACCTGTCATCTACATTAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: GLLHRYRHAMVV*CTHQPVIYIRY Trigger: ATACCTAATGTAGATGACAGGTTGATGGGTGCAGCAAACCACCATGGCATGTCTATACCTATGTAACAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489670.1 |
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| CDS GCA 72 bp | GTGGAGGATTGTGGAAGGGAACAGGATAATTCCTCCTaGAAGGAGGTTATATTCAACTGGAGTTACATAGAA | + |
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Preference number: 6 (lower is better) Translates to: VEDCGREQDNSS*KEVIFNWSYIE Trigger: TTCTATGTAACTCCAGTTGAATATAACCTCCTTGCAGGAGGAATTATCCTGTTCCCTTCCACAATCCTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661437.1 |
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| CDS CAA 72 bp | TGCATAGTAATATTCTTTGTCTCTGACCCAGGGGTTTaGTGTCTTCTGGCAACATCTTTGAAACTGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: CIVIFFVSDPGV*CLLATSLKLWQ Trigger: CTGCCACAGTTTCAAAGATGTTGCCAGAAGACACAAAACCCCTGGGTCAGAGACAAAGAATATTACTATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS CAA 72 bp | TCAAAGAAGTCATCTCAGCCTAAAGCACTGAAGTGGTaGGTTGAAGGTCTTATCTGGAAGTTGCTGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: SKKSSQPKALKW*VEGLIWKLLQF Trigger: GAATTGCAGCAACTTCCAGATAAGACCTTCAACCAACCACTTCAGTGCTTTAGGCTGAGATGACTTCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658412.1 ENST00000659474.1 |
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| CDS GCA 72 bp | ATTGTGAAGAAAACCAAGGGAATTATAAACACCTTGTaGCAAGCATTATCCTCGTTTCTGGGGATGTGGACT | + |
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Preference number: 6 (lower is better) Translates to: IVKKTKGIINTL*QALSSFLGMWT Trigger: AGTCCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGGTGTTTATAATTCCCTTGGTTTTCTTCACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000497996.1 ENST00000658412.1 ENST00000659474.1 ENST00000663929.1 |
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| CDS GCA 72 bp | GAGAACCATGTGAACATTAATCTCCCTCTTGTACCATaGATAGTAATATTCTTTGTCTCTGACCCAGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: ENHVNINLPLVP*IVIFFVSDPGV Trigger: AACCCCTGGGTCAGAGACAAAGAATATTACTATGCATGGTACAAGAGGGAGATTAATGTTCACATGGTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS GCA 72 bp | CTTAGAAGATACATAGTTTCTCTCTGTGGGGCAAAGTaGAGATCTGTTTCCCTGCGCAGAACAATAAAGATA | + |
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Preference number: 6 (lower is better) Translates to: LRRYIVSLCGAK*RSVSLRRTIKI Trigger: TATCTTTATTGTTCTGCGCAGGGAAACAGATCTGCACTTTGCCCCACAGAGAGAAACTATGTATCTTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS CAA 72 bp | GAAATTGTGAAGAAAACCAAGGGAATTATAAACACCTaGTGCCAAGCATTATCCTCGTTTCTGGGGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: EIVKKTKGIINT*CQALSSFLGMW Trigger: CCACATCCCCAGAAACGAGGATAATGCTTGGCACAAGGTGTTTATAATTCCCTTGGTTTTCTTCACAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000497996.1 ENST00000658412.1 ENST00000659474.1 ENST00000663929.1 |
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| CDS CAA 72 bp | AGAACAATAAAGATAACATCTTCTCCAGGGCAAAGTTaGGACAAGTTTGCTAGCAGCCTACTTTTTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: RTIKITSSPGQS*DKFASSLLFRT Trigger: TGTTCTAAAAAGTAGGCTGCTAGCAAACTTGTCCAAACTTTGCCCTGGAGAAGATGTTATCTTTATTGTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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| CDS CAA 90 bp | GTTAACATCTGGATGATTCACAGGGATAAGGAGATCAATTCTTCCTaGGATTCCATGTACTATAGGATAATGAACCTTAAAAGGACACTT | + |
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Preference number: 6 (lower is better) Translates to: VNIWMIHRDKEINSS*DSMYYRIMNLKRTL Trigger: AAGTGTCCTTTTAAGGTTCATTATCCTATAGTACATGGAATCCAAGGAAGAATTGATCTCCTTATCCCTGTGAATCATCCAGATGTTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000663929.1 |
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| CDS TCA 72 bp | ATTCAAAATATGAATCACTTTAATCCACACTGTTCTTaGGGCTTTAGGAAAGCAACTTGTGCCAAGCATTAT | + |
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Preference number: 6 (lower is better) Translates to: IQNMNHFNPHCS*GFRKATCAKHY Trigger: ATAATGCTTGGCACAAGTTGCTTTCCTAAAGCCTCAAGAACAGTGTGGATTAAAGTGATTCATATTTTGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670331.1 |
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| CDS CAA 72 bp | GAGAGACATTTCTCCATAAGAGGTATTATGGATGACTaGAATCAACTCTTTTACTGGACTATCTTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: ERHFSIRGIMDD*NQLFYWTIFPK Trigger: TTTTGGAAAGATAGTCCAGTAAAAGAGTTGATTCAAGTCATCCATAATACCTCTTATGGAGAAATGTCTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000497996.1 ENST00000670331.1 |
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