Pregenerated sensors for LINC01198 (Homo sapiens)
Ensembl gene IDs: ENSG00000231817Ensembl transcript IDs: ENST00000416521.7, ENST00000458282.2, ENST00000593640.7, ENST00000594153.2, ENST00000594428.6, ENST00000598084.6, ENST00000599175.1, ENST00000647588.1, ENST00000647744.2, ENST00000647756.2, ENST00000647866.2, ENST00000647922.2, ENST00000648041.2, ENST00000648133.1, ENST00000648245.2, ENST00000648255.1, ENST00000648333.1, ENST00000648348.1, ENST00000648471.2, ENST00000648492.1, ENST00000648986.2, ENST00000649546.1, ENST00000649910.2, ENST00000650240.2, ENST00000650383.1, ENST00000650465.2, ENST00000653039.1, ENST00000653919.1, ENST00000655282.1, ENST00000655939.1, ENST00000656994.1, ENST00000657077.1, ENST00000658378.1, ENST00000658922.1, ENST00000659419.1, ENST00000659597.1, ENST00000660764.1, ENST00000661606.1, ENST00000661995.1, ENST00000663219.1, ENST00000663664.1, ENST00000663741.1, ENST00000664096.1, ENST00000664325.1, ENST00000665124.1, ENST00000666107.1, ENST00000667460.1, ENST00000667917.1, ENST00000668563.1, ENST00000669385.1, ENST00000670134.1, ENST00000670209.1, ENST00000671320.1, ENST00000671405.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACAGGGGTCCGACGCCACCTGGGAACAGAAAGAAAGCAGGTTATTTaGAATCTCCCGGAGCCTAAGGGCCGAAGGCAGGCGAGAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: TGVRRHLGTERKQVI*NLPEPKGRRQAREF Trigger: GAATTCTCTCGCCTGCCTTCGGCCCTTAGGCTCCGGGAGATTGCAAATAACCTGCTTTCTTTCTGTTCCCAGGTGGCGTCGGACCCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000416521.7 ENST00000648041.2 ENST00000655939.1 ENST00000659419.1 ENST00000659597.1 ENST00000661995.1 ENST00000663664.1 ENST00000671405.1 |
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| CDS GCA 90 bp | CAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTTaGAGTCTACCGGAGCCTGGGGGACTGTGGGTATTAGGTGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QGSKRSPGTERKQVI*SLPEPGGLWVLGVQ Trigger: TTGGACACCTAATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS GCA 90 bp | CAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTTaGAGTCTACCGGAGCCTAAGGGCAGAAGGCAGGTGAGGGAATTC | + |
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Preference number: 5 (lower is better) Translates to: QGSKRSPGTERKQVI*SLPEPKGRRQVREF Trigger: GAATTCCCTCACCTGCCTTCTGCCCTTAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649910.2 ENST00000650240.2 ENST00000670134.1 |
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| CDS CCA 90 bp | CCGGTGGCCTACGTCTCTGAACAACTAGACAGGGTTTCTAAAGGATaGCCTCCCTGTTTGAGGGCCTTGGCAGCAACTGCCCTGCTAGTA | + |
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Preference number: 5 (lower is better) Translates to: PVAYVSEQLDRVSKG*PPCLRALAATALLV Trigger: TACTAGCAGGGCAGTTGCTGCCAAGGCCCTCAAACAGGGAGGCCATCCTTTAGAAACCCTGTCTAGTTGTTCAGAGACGTAGGCCACCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS TCA 90 bp | GCTCAAATCTGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACCTTAGGACCCACTTGGAGGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: AQICRWQVPYLRFTL*QGSDATLGPTWRTV Trigger: CACAGTCCTCCAAGTGGGTCCTAAGGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCAGATTTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648133.1 |
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| CDS GCA 90 bp | CAGGAGTCCGAACGCAGCCCGGGAACAGAAAGAAAGCAGGTTATTTaGAATCTCCCGGAGCCTAAGTGCCTAAGGCAGGCGAGAGAATTC | + |
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Preference number: 5 (lower is better) Translates to: QESERSPGTERKQVI*NLPEPKCLRQAREF Trigger: GAATTCTCTCGCCTGCCTTAGGCACTTAGGCTCCGGGAGATTGCAAATAACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTCGGACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 17 transcripts: ENST00000593640.7 ENST00000647756.2 ENST00000647866.2 ENST00000648133.1 ENST00000648245.2 ENST00000648986.2 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000663219.1 ENST00000664096.1 ENST00000665124.1 ENST00000669385.1 ENST00000670209.1 |
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| CDS GCA 90 bp | CAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTTaGAGTCTACCGGAGCTTGGGATTTACTATCCGACAGGGGTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QGSKRSPGTERKQVI*SLPELGIYYPTGVQ Trigger: TTGGACCCCTGTCGGATAGTAAATCCCAAGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000594153.2 ENST00000647866.2 ENST00000655282.1 ENST00000659597.1 ENST00000670134.1 |
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| CDS GCA 90 bp | ACCTTACTTGAGATTTACTCTCTGACAGGGGTCCGACGCCACAGATaGAACGCCTTCAGTGCTAAAGCTGGGACAGGTGCTCACCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TLLEIYSLTGVRRHR*NAFSAKAGTGAHPL Trigger: GAGAGGGTGAGCACCTGTCCCAGCTTTAGCACTGAAGGCGTTGCATCTGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647744.2 |
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| CDS GCA 90 bp | CAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTTaGAGTCTACCGGAGCCTTACTTGGGATTTACTATCCGACAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QGSKRSPGTERKQVI*SLPEPYLGFTIRQG Trigger: CCCCTGTCGGATAGTAAATCCCAAGTAAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000648041.2 ENST00000658922.1 ENST00000663219.1 ENST00000666107.1 |
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| CDS TCA 90 bp | GCTCAAATCTGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACCCTCTCGGTTTCTCACTCTTACTTC | + |
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Preference number: 5 (lower is better) Translates to: AQICRWQVPYLRFTL*QGSDATLSVSHSYF Trigger: GAAGTAAGAGTGAGAAACCGAGAGGGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCAGATTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598084.6 |
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| CDS TCA 90 bp | GCTCAAATCTGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACAGATGCAACGCCTTCAGTGCTAAAG | + |
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Preference number: 5 (lower is better) Translates to: AQICRWQVPYLRFTL*QGSDATDATPSVLK Trigger: CTTTAGCACTGAAGGCGTTGCATCTGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCAGATTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647744.2 |
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| CDS TCA 90 bp | GCTCAAATCTGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACATGTTCCCAGCAGATCCTAAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: AQICRWQVPYLRFTL*QGSDATCSQQILRG Trigger: ACCTCTTAGGATCTGCTGGGAACATGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCAGATTTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648255.1 |
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| CDS GCA 90 bp | GCACCGCGTTTCACTGCTTTGCTCAGGTCAGAGCTATTCGGCAACTaGTGGACGATAACAATGGCAGAAAGCAATTCTCCACGGCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: APRFTALLRSELFGN*WTITMAESNSPRHR Trigger: CCTATGCCGTGGAGAATTGCTTTCTGCCATTGTTATCGTCCAGCAGTTGCCGAATAGCTCTGACCTGAGCAAAGCAGTGAAACGCGGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 52 transcripts: ENST00000416521.7 ENST00000458282.2 ENST00000593640.7 ENST00000598084.6 ENST00000599175.1 ENST00000647588.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648333.1 ENST00000648348.1 ENST00000648471.2 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650240.2 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000653919.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658378.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661606.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000667917.1 ENST00000668563.1 ENST00000669385.1 ENST00000670134.1 ENST00000670209.1 ENST00000671320.1 ENST00000671405.1 |
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| CDS GCA 90 bp | CAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTTaGAGTCTACCGGAGCTTAGGATTTACTATCTGACAGGAGTCCGA | + |
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Preference number: 5 (lower is better) Translates to: QGSKRSPGTERKQVI*SLPELRIYYLTGVR Trigger: TCGGACTCCTGTCAGATAGTAAATCCTAAGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000593640.7 |
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| CDS CCA 90 bp | GAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTGGGGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTGCCGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ERKQVICSLPEPGGL*VLGVQEESSNLPRA Trigger: TGCCCTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 90 bp | ATCTGCCGAGGGCAGGTACCTTACTTGGGATTTACTGGGGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTGCCGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: ICRGQVPYLGFTGGL*VLGVQEESSNLPRA Trigger: TGCCCTCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657077.1 ENST00000661606.1 |
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| CDS CCA 90 bp | CCGCGTTTCACTGCTTTGCTCAGGTCAGAGCTATTCGGCAACTGCTaGACGATAACAATGGCAGAAAGCAATTCTCCACGGCATAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: PRFTALLRSELFGNC*TITMAESNSPRHRF Trigger: GAACCTATGCCGTGGAGAATTGCTTTCTGCCATTGTTATCGTCCAGCAGTTGCCGAATAGCTCTGACCTGAGCAAAGCAGTGAAACGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 52 transcripts: ENST00000416521.7 ENST00000458282.2 ENST00000593640.7 ENST00000598084.6 ENST00000599175.1 ENST00000647588.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648333.1 ENST00000648348.1 ENST00000648471.2 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650240.2 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000653919.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658378.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661606.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000667917.1 ENST00000668563.1 ENST00000669385.1 ENST00000670134.1 ENST00000670209.1 ENST00000671320.1 ENST00000671405.1 |
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| CDS CCA 90 bp | CCCGGGAACAGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTaGGGGACTGTGGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: PGNRKKAGHLQSTGA*GTVGIRCPRRKLKS Trigger: AGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 90 bp | ATCTGCCGAGGGCAGGTACCTTACTTGGGATTTACTGGAGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTGCCGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ICRGQVPYLGFTGGL*VLGVQEESSNLPMA Trigger: TGCCATCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416521.7 |
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| CDS CCA 90 bp | GAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTGGAGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTGCCGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: ERKQVICSLPEPGGL*VLGVQEESSNLPMA Trigger: TGCCATCGGCAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 36 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 90 bp | CCCGGGAACAGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTaGAGGACTGTGGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: PGNRKKAGHLQSTGA*RTVGIRCPRRKLKS Trigger: AGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 36 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 90 bp | GAAAGCTCAAATCTGCCGAGGGCAGGTACCTTACTTGGGATTTACTaGGGGACTGTGGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: ESSNLPRAGTLLGIY*GTVGIRCPRRKLKS Trigger: AGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGATTTGAGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657077.1 ENST00000661606.1 |
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| CDS CCA 90 bp | GAAAGCTCAAATCTGCCGAGGGCAGGTACCTTACTTGGGATTTACTaGAGGACTGTGGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: ESSNLPRAGTLLGIY*RTVGIRCPRRKLKS Trigger: AGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGATTTGAGCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416521.7 |
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| CDS CCA 90 bp | TTCACTTATACCGTGAGAATTAATACCCACTTCCTGAAGTTATCCTaGAGGACTGTGGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCT | + |
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Preference number: 5 (lower is better) Translates to: FTYTVRINTHFLKLS*RTVGIRCPRRKLKS Trigger: AGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGATAACTTCAGGAAGTGGGTATTAATTCTCACGGTATAAGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000416521.7 ENST00000598084.6 ENST00000655939.1 ENST00000656994.1 ENST00000664325.1 ENST00000665124.1 |
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| CDS TCA 90 bp | ACATGTTCCCAGCAGATCCTAAGAGGTAGCAGCCTTGTTGGTGAATaGGTTATTTGTTCATTCAATAGACTAAGTTCTCTGTGTTGCTAT | + |
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Preference number: 5 (lower is better) Translates to: TCSQQILRGSSLVGE*VICSFNRLSSLCCY Trigger: ATAGCAACACAGAGAACTTAGTCTATTGAATGAACAAATAACTCATTCACCAACAAGGCTGCTACCTCTTAGGATCTGCTGGGAACATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648255.1 |
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| CDS CAA 72 bp | GTGGCAACCCACTCAACAGCACCGCGTTTCACTGCTTaGCTCAGGTCAGAGCTATTCGGCAACTGCTGGACG | + |
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Preference number: 6 (lower is better) Translates to: VATHSTAPRFTA*LRSELFGNCWT Trigger: CGTCCAGCAGTTGCCGAATAGCTCTGACCTGAGCAAAGCAGTGAAACGCGGTGCTGTTGAGTGGGTTGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 52 transcripts: ENST00000416521.7 ENST00000458282.2 ENST00000593640.7 ENST00000598084.6 ENST00000599175.1 ENST00000647588.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648333.1 ENST00000648348.1 ENST00000648471.2 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650240.2 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000653919.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658378.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661606.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000667917.1 ENST00000668563.1 ENST00000669385.1 ENST00000670134.1 ENST00000670209.1 ENST00000671320.1 ENST00000671405.1 |
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| CDS CAA 90 bp | ACAGGGGTCCAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTaGCAGTCTACCGGAGCCTGGAGGACTGTGGGTATTAGGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TGVQTQPGNRKKAGH*QSTGAWRTVGIRCP Trigger: TGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTGGACCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 37 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS TCA 72 bp | TGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACCCTCTCGGTTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: CRWQVPYLRFTL*QGSDATLSVSH Trigger: GTGAGAAACCGAGAGGGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598084.6 |
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| CDS GCA 72 bp | TGGCAACCCACTCAACAGCACCGCGTTTCACTGCTTTaGTCAGGTCAGAGCTATTCGGCAACTGCTGGACGA | + |
|
Preference number: 6 (lower is better) Translates to: WQPTQQHRVSLL*SGQSYSATAGR Trigger: TCGTCCAGCAGTTGCCGAATAGCTCTGACCTGAGCAAAGCAGTGAAACGCGGTGCTGTTGAGTGGGTTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 52 transcripts: ENST00000416521.7 ENST00000458282.2 ENST00000593640.7 ENST00000598084.6 ENST00000599175.1 ENST00000647588.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648333.1 ENST00000648348.1 ENST00000648471.2 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650240.2 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000653919.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658378.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661606.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000667917.1 ENST00000668563.1 ENST00000669385.1 ENST00000670134.1 ENST00000670209.1 ENST00000671320.1 ENST00000671405.1 |
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| CDS GCA 72 bp | GAGATTTACTCTCTGACAGGGGTCCGACGCCACAGATaGAACGCCTTCAGTGCTAAAGCTGGGACAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EIYSLTGVRRHR*NAFSAKAGTGA Trigger: AGCACCTGTCCCAGCTTTAGCACTGAAGGCGTTGCATCTGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647744.2 |
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| CDS CCA 72 bp | GATTTACTCTCTGACAGGGGTCCGACGCCACCTATATaGAACCATGGATTGCTGGACCGGCATGGTGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DLLSDRGPTPPI*NHGLLDRHGGS Trigger: TGAGCCACCATGCCGGTCCAGCAATCCATGGTTCCATATAGGTGGCGTCGGACCCCTGTCAGAGAGTAAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000647922.2 ENST00000667460.1 |
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| CDS CAA 72 bp | CAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTaGCAGTCTACCGGAGCCTGGGGGACTGTGGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: QTQPGNRKKAGH*QSTGAWGTVGI Trigger: AATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS TCA 72 bp | TGCCGATGGCAGGTACCTTACTTGAGATTTACTCTCTaGCAGGGGTCCGACGCCACAGATGCAACGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRWQVPYLRFTL*QGSDATDATPS Trigger: TGAAGGCGTTGCATCTGTGGCGTCGGACCCCTGTCAGAGAGTAAATCTCAAGTAAGGTACCTGCCATCGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647744.2 |
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| CDS CCA 72 bp | TACGTCTCTGAACAACTAGACAGGGTTTCTGAAGGATaGCTCCCCTGTTTGAGGCCTTGGCAGCAACTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: YVSEQLDRVSEG*LPCLRPWQQLP Trigger: GGGCAGTTGCTGCCAAGGCCTCAAACAGGGGAGCCATCCTTCAGAAACCCTGTCTAGTTGTTCAGAGACGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000647756.2 |
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| CDS CCA 72 bp | TATGAGGTCACAAAGGGGGCGGGCACCGGGAACCTTTaGAATGGGGATCCCAAGAACAGCAAGTCTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: YEVTKGAGTGNL*NGDPKNSKSFM Trigger: CATGAAAGACTTGCTGTTCTTGGGATCCCCATTCCAAAGGTTCCCGGTGCCCGCCCCCTTTGTGACCTCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CAA 72 bp | CAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTaGCAGTCTACCGGAGCCTGGAGGACTGTGGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: QTQPGNRKKAGH*QSTGAWRTVGI Trigger: AATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 37 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 72 bp | TACGTCTCTGAACAACTAGACAGGGTTTCTAAAGGATaGCCTCCCTGTTTGAGGGCCTTGGCAGCAACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: YVSEQLDRVSKG*PPCLRALAATA Trigger: GGCAGTTGCTGCCAAGGCCCTCAAACAGGGAGGCCATCCTTTAGAAACCCTGTCTAGTTGTTCAGAGACGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CCA 72 bp | CTCTCTGACAGGGGTCCGACGCCACTTGGAGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSDRGPTPLGGL*VLGVQEESSNL Trigger: CAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAAGTGGCGTCGGACCCCTGTCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648986.2 |
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| CDS CAA 72 bp | CAACTAGACAGGGTTTCTAAAGGATGGCCTCCCTGTTaGAGGGCCTTGGCAGCAACTGCCCTGCTAGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: QLDRVSKGWPPC*RALAATALLVQ Trigger: TTGTACTAGCAGGGCAGTTGCTGCCAAGGCCCTCAAACAGGGAGGCCATCCTTTAGAAACCCTGTCTAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CAA 72 bp | GCCCTGGGGCTACCCGATCTGACAAAGCCTTTGCCATaGTATGCGTTAGAGAGAGAAAAGATGGCAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALGLPDLTKPLP*YALEREKMAAG Trigger: TCCAGCTGCCATCTTTTCTCTCTCTAACGCATACAATGGCAAAGGCTTTGTCAGATCGGGTAGCCCCAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CCA 72 bp | AGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCTTaGGATTTACTATCCGACAGGGGTCCAAACGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKKAGHLQSTGA*DLLSDRGPNAA Trigger: GGCTGCGTTTGGACCCCTGTCGGATAGTAAATCCCAAGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000594153.2 ENST00000647866.2 ENST00000655282.1 ENST00000659597.1 ENST00000670134.1 |
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| CDS CCA 72 bp | CAGGTCATTTGCAGTCTACCGGAGCCTGGGGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QVICSLPEPGGL*VLGVQEESSNL Trigger: CAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CAA 72 bp | CAGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCTaGGGATTTACTATCCGACAGGGGTCCAAACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QKESRSFAVYRS*GFTIRQGSKRS Trigger: GCTGCGTTTGGACCCCTGTCGGATAGTAAATCCCAAGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000594153.2 ENST00000647866.2 ENST00000655282.1 ENST00000659597.1 ENST00000670134.1 |
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| CDS CAA 72 bp | AGGGTTTCTAAAGGATGGCCTCCCTGTTTGAGGGCCTaGGCAGCAACTGCCCTGCTAGTACAAGAAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: RVSKGWPPCLRA*AATALLVQEAN Trigger: ATTTGCTTCTTGTACTAGCAGGGCAGTTGCTGCCAAGGCCCTCAAACAGGGAGGCCATCCTTTAGAAACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CAA 90 bp | GTCTCTGAACAACTAGACAGGGTTTCTAAAGGATGGCCTCCCTGTTaGAGGGCCTTGGCAGCAACTGCCCTGCTAGTACAAGAAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VSEQLDRVSKGWPPC*RALAATALLVQEAN Trigger: ATTTGCTTCTTGTACTAGCAGGGCAGTTGCTGCCAAGGCCCTCAAACAGGGAGGCCATCCTTTAGAAACCCTGTCTAGTTGTTCAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CCA 72 bp | CAGGTCATTTGCAGTCTACCGGAGCCTGGAGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: QVICSLPEPGGL*VLGVQEESSNL Trigger: CAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 36 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 72 bp | AGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTaGGGGACTGTGGGTATTAGGTGTCCAAGAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKKAGHLQSTGA*GTVGIRCPRRK Trigger: CTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 26 transcripts: ENST00000594428.6 ENST00000647744.2 ENST00000647756.2 ENST00000647922.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000649910.2 ENST00000650465.2 ENST00000653919.1 ENST00000655939.1 ENST00000656994.1 ENST00000658378.1 ENST00000659419.1 ENST00000661995.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000665124.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 72 bp | AATCTGCCGAGGGCAGGTACCTTACTTGGGATTTACTaGGGGACTGTGGGTATTAGGTGTCCAAGAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NLPRAGTLLGIY*GTVGIRCPRRK Trigger: CTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657077.1 ENST00000661606.1 |
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| CDS CCA 72 bp | AGAAAGAAAGCAGGTCATTTGCAGTCTACCGGAGCCTaGAGGACTGTGGGTATTAGGTGTCCAAGAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKKAGHLQSTGA*RTVGIRCPRRK Trigger: CTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 37 transcripts: ENST00000594153.2 ENST00000598084.6 ENST00000599175.1 ENST00000647744.2 ENST00000647756.2 ENST00000647866.2 ENST00000647922.2 ENST00000648041.2 ENST00000648133.1 ENST00000648245.2 ENST00000648255.1 ENST00000648492.1 ENST00000648986.2 ENST00000649546.1 ENST00000650383.1 ENST00000650465.2 ENST00000653039.1 ENST00000655282.1 ENST00000655939.1 ENST00000656994.1 ENST00000657077.1 ENST00000658922.1 ENST00000659419.1 ENST00000659597.1 ENST00000660764.1 ENST00000661995.1 ENST00000663219.1 ENST00000663664.1 ENST00000663741.1 ENST00000664096.1 ENST00000664325.1 ENST00000665124.1 ENST00000666107.1 ENST00000667460.1 ENST00000669385.1 ENST00000670209.1 ENST00000671405.1 |
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| CDS CCA 72 bp | GGGCAGGTACCTTACTTGGGATTTACTGGGGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQVPYLGFTGGL*VLGVQEESSNL Trigger: CAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCCCCAGTAAATCCCAAGTAAGGTACCTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000657077.1 ENST00000661606.1 |
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| CDS CAA 72 bp | AAGAAAGCTCAAATCTGCCGAGGGCAGGTACCTTACTaGGGATTTACTGGAGGACTGTGGGTATTAGGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KKAQICRGQVPY*GFTGGLWVLGV Trigger: GACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGATTTGAGCTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416521.7 |
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| CDS CAA 72 bp | CAAACGCAGCCCGGGAACAGAAAGAAAGCAGGTCATTaGCAGTCTACCGGAGCCTTACTTGGGATTTACTAT | + |
|
Preference number: 6 (lower is better) Translates to: QTQPGNRKKAGH*QSTGALLGIYY Trigger: ATAGTAAATCCCAAGTAAGGCTCCGGTAGACTGCAAATGACCTGCTTTCTTTCTGTTCCCGGGCTGCGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000648041.2 ENST00000658922.1 ENST00000663219.1 ENST00000666107.1 |
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| CDS CAA 72 bp | CTCTGCATCCCAAACTTTGCAGTATTAGCCAAGCCTTaGTATGAGGTCACAAAGGGGGCAGGTGAGGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: LCIPNFAVLAKP*YEVTKGAGEGI Trigger: AATTCCCTCACCTGCCCCCTTTGTGACCTCATACAAAGGCTTGGCTAATACTGCAAAGTTTGGGATGCAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000650240.2 |
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| CDS CAA 90 bp | GTGTCCAAGAAGAAAGCTCAAATCTGCCGAGGGCAGGTACCTTACTaGGGATTTACTGGAGGACTGTGGGTATTAGGTGTCCAAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSKKKAQICRGQVPY*GFTGGLWVLGVQEE Trigger: TTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGTAAGGTACCTGCCCTCGGCAGATTTGAGCTTTCTTCTTGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416521.7 |
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| CDS CCA 72 bp | GGGCAGGTACCTTACTTGGGATTTACTGGAGGACTGTaGGTATTAGGTGTCCAAGAAGAAAGCTCAAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GQVPYLGFTGGL*VLGVQEESSNL Trigger: CAGATTTGAGCTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGTAAATCCCAAGTAAGGTACCTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000416521.7 |
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| CDS CAA 72 bp | CTCTGCATCCCAAATTTTGCATTATTAGCCAAGCCTTaGTATGAGGTCACAAAGGGGGCAGGTGAGGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: LCIPNFALLAKP*YEVTKGAGEGI Trigger: AATTCCCTCACCTGCCCCCTTTGTGACCTCATACAAAGGCTTGGCTAATAATGCAAAATTTGGGATGCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649910.2 |
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| CDS CCA 72 bp | ACCGTGAGAATTAATACCCACTTCCTGAAGTTATCCTaGAGGACTGTGGGTATTAGGTGTCCAAGAAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: TVRINTHFLKLS*RTVGIRCPRRK Trigger: CTTTCTTCTTGGACACCTAATACCCACAGTCCTCCAGGATAACTTCAGGAAGTGGGTATTAATTCTCACGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000416521.7 ENST00000598084.6 ENST00000655939.1 ENST00000656994.1 ENST00000664325.1 ENST00000665124.1 |
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| CDS TCA 72 bp | CAGCAGATCCTAAGAGGTAGCAGCCTTGTTGGTGAATaGGTTATTTGTTCATTCAATAGACTAAGTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QQILRGSSLVGE*VICSFNRLSSL Trigger: CAGAGAACTTAGTCTATTGAATGAACAAATAACTCATTCACCAACAAGGCTGCTACCTCTTAGGATCTGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648255.1 |
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| CDS TCA 72 bp | AAGGCAGCAAGGTCAAATAAGAATGATATCACAGGGTaGACACACAATGTGATATTAGGAGTAATACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KAARSNKNDITG*THNVILGVIPP Trigger: GGGAGGTATTACTCCTAATATCACATTGTGTGTTCACCCTGTGATATCATTCTTATTTGACCTTGCTGCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648333.1 |
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| CDS TCA 72 bp | ATATTAGGAACCATATCACAGGAGGTACAGCCCCTGTaGTTTACAAGTAACATGTCTATAGAATGTTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: ILGTISQEVQPL*FTSNMSIECYN Trigger: GTTGTAACATTCTATAGACATGTTACTTGTAAATCACAGGGGCTGTACCTCCTGTGATATGGTTCCTAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648471.2 |
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