Pregenerated sensors for LINC01194 (Homo sapiens)
Ensembl gene IDs: ENSG00000248131Ensembl transcript IDs: ENST00000505196.1, ENST00000505877.5, ENST00000513051.6, ENST00000658959.1, ENST00000664069.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGCTCCCACTTTGGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTaGACTGTGGGAGCCCCTTCCTGGGCTGGCAGAGGCCGGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GLPLWWHLRSPSARR*TVGAPSWAGRGRSR Trigger: CCGGCTCCGGCCTCTGCCAGCCCAGGAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CCA 90 bp | CCTCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGTaGCACTTGAGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PRSLSAPPLPGLPLW*HLRSPSARRCTVGA Trigger: GGCTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS TCA 90 bp | CGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGTGGCACTTaGGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGAGCCCCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: RSRRLLCLGSHFGGT*GVLQPAAALWEPLP Trigger: AGGAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CCA 90 bp | AGCCCTCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTaGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SPRSLSAPPLPGLPL*WHLRSPSARRCTVG Trigger: TCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAGGGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS TCA 90 bp | AACAACATTGCACTCCAGCCTCAAGAGCAGTCTATTGCTGAGACGTaGCAGCGTGCTGGCAGGCAGCCCTCGCTCGCTCTCGGCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: NNIALQPQEQSIAET*QRAGRQPSLALGAS Trigger: GGAGGCGCCGAGAGCGAGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGCTGGAGTGCAATGTTGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 |
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| CDS TCA 90 bp | GTAACAAAAATAGCCATCCCTCAAGAGCAGTCTATTGCTGAGACGTaGCAGCGTGCTGGCAGGCAGCCCTCGCTCGCTCTCGGCGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VTKIAIPQEQSIAET*QRAGRQPSLALGAS Trigger: GGAGGCGCCGAGAGCGAGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGGATGGCTATTTTTGTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664069.1 |
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| CDS CAA 90 bp | GAGCCCCTTCCTGGGCTGGCAGAGGCCGGAGCCGGCTCCCTCAGCTaGCAAGGCGGTGTGGAGGGAGAGGCGCAGGCGGGAACCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: EPLPGLAEAGAGSLS*QGGVEGEAQAGTRA Trigger: AGCCCTGGTTCCCGCCTGCGCCTCTCCCTCCACACCGCCTTGCAAGCTGAGGGAGCCGGCTCCGGCCTCTGCCAGCCCAGGAAGGGGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513051.6 |
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| CDS GCA 72 bp | CTGGGCTGGCAGAGGCCGGAGCCGGCTCCCTCAGCTTaGAAGGCGGTGTGGAGGGAGAGGCGCAGGCGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGWQRPEPAPSA*KAVWRERRRRE Trigger: TTCCCGCCTGCGCCTCTCCCTCCACACCGCCTTGCAAGCTGAGGGAGCCGGCTCCGGCCTCTGCCAGCCCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000513051.6 ENST00000664069.1 |
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| CDS CCA 72 bp | AGCCCGCCGCTGCACTGTGGGAGCCCCTTCCTGGGCTaGCAGAGGCCGGAGCCGGCTCCCTCAGCTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPPLHCGSPFLG*QRPEPAPSACK Trigger: CTTGCAAGCTGAGGGAGCCGGCTCCGGCCTCTGCCAGCCCAGGAAGGGGCTCCCACAGTGCAGCGGCGGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CAA 90 bp | CAGCCCTCGCTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTaGGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTGCACTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QPSLALGASSAWAPT*VALEESFSPPLHCG Trigger: CCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAGCGAGGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CAA 90 bp | TCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGTGGCACTaGAGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGAGCCCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLSAPPLPGLPLWWH*RSPSARRCTVGAPS Trigger: GGAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CCA 72 bp | TCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTaGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLSAPPLPGLPL*WHLRSPSARRC Trigger: GCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CAA 72 bp | CTCGCTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTaGGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LALGASSAWAPT*VALEESFSPPL Trigger: CAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAGCGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS TCA 72 bp | CGCCTCCTCTGCCTGGGCTCCCACTTTGGTGGCACTTaGGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RLLCLGSHFGGT*GVLQPAAALWE Trigger: CTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS GCA 72 bp | CTTTGGTGGCACTTGAGGAGTCCTTCAGCCCGCCGCTaGACTGTGGGAGCCCCTTCCTGGGCTGGCAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWWHLRSPSARR*TVGAPSWAGRG Trigger: GCCTCTGCCAGCCCAGGAAGGGGCTCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CCA 72 bp | CTCTCGGCGCCTCCTCTGCCTGGGCTCCCACTTTGGTaGCACTTGAGGAGTCCTTCAGCCCGCCGCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: LSAPPLPGLPLW*HLRSPSARRCT Trigger: AGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGCCGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS CAA 72 bp | GCGCCTCCTCTGCCTGGGCTCCCACTTTGGTGGCACTaGAGGAGTCCTTCAGCCCGCCGCTGCACTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: APPLPGLPLWWH*RSPSARRCTVG Trigger: TCCCACAGTGCAGCGGCGGGCTGAAGGACTCCTCAAGTGCCACCAAAGTGGGAGCCCAGGCAGAGGAGGCGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 ENST00000664069.1 |
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| CDS TCA 72 bp | GCACTCCAGCCTCAAGAGCAGTCTATTGCTGAGACGTaGCAGCGTGCTGGCAGGCAGCCCTCGCTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: ALQPQEQSIAET*QRAGRQPSLAL Trigger: GAGAGCGAGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGCTGGAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 |
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| CDS TCA 72 bp | ATAGCCATCCCTCAAGAGCAGTCTATTGCTGAGACGTaGCAGCGTGCTGGCAGGCAGCCCTCGCTCGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: IAIPQEQSIAET*QRAGRQPSLAL Trigger: GAGAGCGAGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGGATGGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664069.1 |
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| CDS TCA 72 bp | CAACATTGCACTCCAGCCTCAAGAGCAGTCTATTGCTaGGACGTGACAGCGTGCTGGCAGGCAGCCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: QHCTPASRAVYC*DVTACWQAALA Trigger: AGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGCTGGAGTGCAATGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 |
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| CDS TCA 72 bp | AACAAAAATAGCCATCCCTCAAGAGCAGTCTATTGCTaGGACGTGACAGCGTGCTGGCAGGCAGCCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: NKNSHPSRAVYC*DVTACWQAALA Trigger: AGCGAGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGGATGGCTATTTTTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664069.1 |
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| CDS CAA 72 bp | ATAACAACATTGCACTCCAGCCTCAAGAGCAGTCTATaGCTGAGACGTGACAGCGTGCTGGCAGGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: ITTLHSSLKSSL*LRRDSVLAGSP Trigger: AGGGCTGCCTGCCAGCACGCTGTCACGTCTCAGCAATAGACTGCTCTTGAGGCTGGAGTGCAATGTTGTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505196.1 ENST00000505877.5 ENST00000513051.6 |
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| CDS CAA 72 bp | GAAAACAATTTGCTGACTCAGAGGGTAGGGTGGTCATaGTGTCATTTTTCTACCTCTCTGCGCATTTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: ENNLLTQRVGWS*CHFSTSLRICD Trigger: ATCACAAATGCGCAGAGAGGTAGAAAAATGACACAATGACCACCCTACCCTCTGAGTCAGCAAATTGTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513051.6 |
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| CDS CAA 72 bp | CTACCTCTCTGCGCATTTGTGATCAGCTATCTTCTGTaGACAAATATCCATAGAACCTGTTTGCAACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPLCAFVISYLL*TNIHRTCLQLQ Trigger: TTGAAGTTGCAAACAGGTTCTATGGATATTTGTCAACAGAAGATAGCTGATCACAAATGCGCAGAGAGGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513051.6 |
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| CDS TCA 72 bp | AGACAATACTATCACAGAAGGTTAGGTGCCTGCAAATaGAATTGTGCTAGTGAAATGTTTTTACCTACTGCA | + |
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Preference number: 6 (lower is better) Translates to: RQYYHRRLGACK*NCASEMFLPTA Trigger: TGCAGTAGGTAAAAACATTTCACTAGCACAATTTCATTTGCAGGCACCTAACCTTCTGTGATAGTATTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000505877.5 ENST00000658959.1 ENST00000664069.1 |
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| CDS CAA 90 bp | GTCATTTTTCTACCTCTCTGCGCATTTGTGATCAGCTATCTTCTGTaGACAAATATCCATAGAACCTGTTTGCAACTTCAATACTTATTG | + |
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Preference number: 6 (lower is better) Translates to: VIFLPLCAFVISYLL*TNIHRTCLQLQYLL Trigger: CAATAAGTATTGAAGTTGCAAACAGGTTCTATGGATATTTGTCAACAGAAGATAGCTGATCACAAATGCGCAGAGAGGTAGAAAAATGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513051.6 |
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