Pregenerated sensors for LINC01163 (Homo sapiens)
Ensembl gene IDs: ENSG00000280953Ensembl transcript IDs: ENST00000626518.2, ENST00000630252.1
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGTAGCCACAGGCTGTCCTTGTTCCTGCCTGCCGAAGCCGCCGGCTaGTGGCTGCCGCTGATCAGCCGGCCCCCAAGGCGATGGCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: SSHRLSLFLPAEAAG*WLPLISRPPRRWPN Trigger: GTTAGGCCATCGCCTTGGGGGCCGGCTGATCAGCGGCAGCCAGCAGCCGGCGGCTTCGGCAGGCAGGAACAAGGACAGCCTGTGGCTACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS CCA 90 bp | AGCCACAGGCTGTCCTTGTTCCTGCCTGCCGAAGCCGCCGGCTGCTaGCTGCCGCTGATCAGCCGGCCCCCAAGGCGATGGCCTAACAAG | + |
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Preference number: 5 (lower is better) Translates to: SHRLSLFLPAEAAGC*LPLISRPPRRWPNK Trigger: CTTGTTAGGCCATCGCCTTGGGGGCCGGCTGATCAGCGGCAGCCAGCAGCCGGCGGCTTCGGCAGGCAGGAACAAGGACAGCCTGTGGCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS TCA 90 bp | TGTCCTTGTTCCTGCCTGCCGAAGCCGCCGGCTGCTGGCTGCCGCTaGTCAGCCGGCCCCCAAGGCGATGGCCTAACAAGCCCCAGTAGA | + |
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Preference number: 5 (lower is better) Translates to: CPCSCLPKPPAAGCR*SAGPQGDGLTSPSR Trigger: TCTACTGGGGCTTGTTAGGCCATCGCCTTGGGGGCCGGCTGATCAGCGGCAGCCAGCAGCCGGCGGCTTCGGCAGGCAGGAACAAGGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS GCA 90 bp | TGTCATTCTAGATCCCACTTCCCAGAGCCGGCTCCATACCTGTCGTaGCTGGCTAAGAAAAGGGCTCCACATGGGCATCACATAGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: CHSRSHFPEPAPYLS*LAKKRAPHGHHIGA Trigger: GGCACCTATGTGATGCCCATGTGGAGCCCTTTTCTTAGCCAGGCACGACAGGTATGGAGCCGGCTCTGGGAAGTGGGATCTAGAATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 90 bp | GATTGTCTCAGCCTCAGTTCCACAAAGCCACATTCCAGAAGGCGATaGTATGTGGGGTGGGGGAAGGTCTGCACCACCGCCTTAGGTCTA | + |
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Preference number: 5 (lower is better) Translates to: DCLSLSSTKPHSRRR*YVGWGKVCTTALGL Trigger: TAGACCTAAGGCGGTGGTGCAGACCTTCCCCCACCCCACATACCATCGCCTTCTGGAATGTGGCTTTGTGGAACTGAGGCTGAGACAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 90 bp | CCTCAGGACAGATCGAGGGCCTCTGGGCATCCAGGCTACAGGCGTTaGTTACCATGCTACGCAGCATCTAAGATGAATCTCAGAGACACT | + |
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Preference number: 5 (lower is better) Translates to: PQDRSRASGHPGYRR*LPCYAASKMNLRDT Trigger: AGTGTCTCTGAGATTCATCTTAGATGCTGCGTAGCATGGTAACCAACGCCTGTAGCCTGGATGCCCAGAGGCCCTCGATCTGTCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS GCA 90 bp | AGATCGAGGGCCTCTGGGCATCCAGGCTACAGGCGTTGGTTACCATaGTACGCAGCATCTAAGATGAATCTCAGAGACACTGTGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: RSRASGHPGYRRWLP*YAASKMNLRDTVLS Trigger: ACTCAGCACAGTGTCTCTGAGATTCATCTTAGATGCTGCGTAGCATGGTAACCAACGCCTGTAGCCTGGATGCCCAGAGGCCCTCGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS CCA 90 bp | GGAAAATCTGAAGGAGACCTGTGGGTTGCAATTATCCATTCTTTGTaGCCTCCGGAGGCCCTGGGTACCTTGGTGATCACAGTGAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GKSEGDLWVAIIHSL*PPEALGTLVITVRE Trigger: CTCTCTCACTGTGATCACCAAGGTACCCAGGGCCTCCGGAGGCCACAAAGAATGGATAATTGCAACCCACAGGTCTCCTTCAGATTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 90 bp | GTTTGCTCCTGCCTAGGAGGCGACCTAATCCTTCCCAGGCAGGGATaGAGCTTCTGTTTGCAGTGGTACAATGAGATTTCATCACTCCTA | + |
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Preference number: 5 (lower is better) Translates to: VCSCLGGDLILPRQG*SFCLQWYNEISSLL Trigger: TAGGAGTGATGAAATCTCATTGTACCACTGCAAACAGAAGCTGCATCCCTGCCTGGGAAGGATTAGGTCGCCTCCTAGGCAGGAGCAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 90 bp | ACTGGCATTAAAACCTTGCCATGCACACTGGTCCCTGCCCAGCTTTaGGTCCAACACCAATTCGTCCTCGATTTCTTCCCCAAATACCAA | + |
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Preference number: 5 (lower is better) Translates to: TGIKTLPCTLVPAQL*VQHQFVLDFFPKYQ Trigger: TTGGTATTTGGGGAAGAAATCGAGGACGAATTGGTGTTGGACCCAAAGCTGGGCAGGGACCAGTGTGCATGGCAAGGTTTTAATGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 90 bp | CTCACACCACTCCCCACCATAGAGCATTTGCTGACCAGAAGGGCTTaGGGAAAATCTGAAGGAGACCTGTGGGTTGCAATTATCCATTCT | + |
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Preference number: 5 (lower is better) Translates to: LTPLPTIEHLLTRRA*GKSEGDLWVAIIHS Trigger: AGAATGGATAATTGCAACCCACAGGTCTCCTTCAGATTTTCCCCAAGCCCTTCTGGTCAGCAAATGCTCTATGGTGGGGAGTGGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 90 bp | CCAACCCATACGGAATTAAGTGGGCTCTGTGATGCTAACATGATTTaGCTGTATATTCCTCCCAAGGCACTCTCCCCCATCATGAAGCAT | + |
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Preference number: 5 (lower is better) Translates to: PTHTELSGLCDANMI*LYIPPKALSPIMKH Trigger: ATGCTTCATGATGGGGGAGAGTGCCTTGGGAGGAATATACAGGCAAATCATGTTAGCATCACAGAGCCCACTTAATTCCGTATGGGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS TCA 90 bp | TTCAAATATCCAACAGAAAGAGGCAACTGCAGGCTAATCTTGGGGTaGTTAAAGGAAGAAACGTTCTCCCGCTGGTGCAGGGCTAATGTC | + |
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Preference number: 5 (lower is better) Translates to: FKYPTERGNCRLILG*LKEETFSRWCRANV Trigger: GACATTAGCCCTGCACCAGCGGGAGAACGTTTCTTCCTTTAATCACCCCAAGATTAGCCTGCAGTTGCCTCTTTCTGTTGGATATTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 90 bp | CTTGAGCTTCTTTATGAGGGCAGGACCATGTGTTCTGGAAGCTTCTaGGCTCATATTCCAGCTCCACAACAAGAGAGAAAAGATTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LELLYEGRTMCSGSF*AHIPAPQQERKDLL Trigger: AAGCAAATCTTTTCTCTCTTGTTGTGGAGCTGGAATATGAGCCCAGAAGCTTCCAGAACACATGGTCCTGCCCTCATAAAGAAGCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 90 bp | AGAGACACTGTGCTGAGTGAAGCCGGTCTTAAAGATGTTACACACTaGTTCGTTCAATTTACTTGTCATTCTCCAAAACATAAAGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: RDTVLSEAGLKDVTH*FVQFTCHSPKHKAV Trigger: TACAGCTTTATGTTTTGGAGAATGACAAGTAAATTGAACGAAGCAGTGTGTAACATCTTTAAGACCGGCTTCACTCAGCACAGTGTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS CCA 72 bp | CTGTCCTTGTTCCTGCCTGCCGAAGCCGCCGGCTGCTaGCTGCCGCTGATCAGCCGGCCCCCAAGGCGATGG | + |
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Preference number: 6 (lower is better) Translates to: LSLFLPAEAAGC*LPLISRPPRRW Trigger: CCATCGCCTTGGGGGCCGGCTGATCAGCGGCAGCCAGCAGCCGGCGGCTTCGGCAGGCAGGAACAAGGACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS GCA 72 bp | AGATCCCACTTCCCAGAGCCGGCTCCATACCTGTCGTaGCTGGCTAAGAAAAGGGCTCCACATGGGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RSHFPEPAPYLS*LAKKRAPHGHH Trigger: GTGATGCCCATGTGGAGCCCTTTTCTTAGCCAGGCACGACAGGTATGGAGCCGGCTCTGGGAAGTGGGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | CAAGGCGATGGCCTAACAAGCCCCAGTAGAAGCGAATaGGAGGGGCTTCTCTCTTCCCTAGTCCAGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: QGDGLTSPSRSE*EGLLSSLVQRS Trigger: ACTTCTCTGGACTAGGGAAGAGAGAAGCCCCTCCCATTCGCTTCTACTGGGGCTTGTTAGGCCATCGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS CAA 90 bp | AGAGAAGAGCAAGCAGCCAACCTCCTAGTCCTTTCCACCAAATGTTaGCTCCTGCCTAGGAGGCGACCTAATCCTTCCCAGGCAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: REEQAANLLVLSTKC*LLPRRRPNPSQAGM Trigger: CATCCCTGCCTGGGAAGGATTAGGTCGCCTCCTAGGCAGGAGCAAACATTTGGTGGAAAGGACTAGGAGGTTGGCTGCTTGCTCTTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 90 bp | ATGGGGAGATGGCATGGGGAGAAGCTTTGGGAGCCTCTAGTCCACTaGAGCTTTAGTACCCAGACCTACCTTTCTGGAGAGGTGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: MGRWHGEKLWEPLVH*SFSTQTYLSGEVGQ Trigger: CTGTCCCACCTCTCCAGAAAGGTAGGTCTGGGTACTAAAGCTCAAGTGGACTAGAGGCTCCCAAAGCTTCTCCCCATGCCATCTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS TCA 72 bp | CGACTTTGCCACATGACCAGGTCCAGACCTGTCACATaGCCAGAAGAATGGGGCACTGTGATTGTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLCHMTRSRPVT*PEEWGTVIVSA Trigger: GGCTGAGACAATCACAGTGCCCCATTCTTCTGGTCATGTGACAGGTCTGGACCTGGTCATGTGGCAAAGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | AAAACCTTGCCATGCACACTGGTCCCTGCCCAGCTTTaGGTCCAACACCAATTCGTCCTCGATTTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: KTLPCTLVPAQL*VQHQFVLDFFP Trigger: GGGGAAGAAATCGAGGACGAATTGGTGTTGGACCCAAAGCTGGGCAGGGACCAGTGTGCATGGCAAGGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | AGATCGAGGGCCTCTGGGCATCCAGGCTACAGGCGTTaGTTACCATGCTACGCAGCATCTAAGATGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: RSRASGHPGYRR*LPCYAASKMNL Trigger: GAGATTCATCTTAGATGCTGCGTAGCATGGTAACCAACGCCTGTAGCCTGGATGCCCAGAGGCCCTCGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS CAA 72 bp | CAAGCAGCCAACCTCCTAGTCCTTTCCACCAAATGTTaGCTCCTGCCTAGGAGGCGACCTAATCCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QAANLLVLSTKC*LLPRRRPNPSQ Trigger: CTGGGAAGGATTAGGTCGCCTCCTAGGCAGGAGCAAACATTTGGTGGAAAGGACTAGGAGGTTGGCTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | TCTGAAGGAGACCTGTGGGTTGCAATTATCCATTCTTaGTGGCCTCCGGAGGCCCTGGGTACCTTGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: SEGDLWVAIIHS*WPPEALGTLVI Trigger: GATCACCAAGGTACCCAGGGCCTCCGGAGGCCACAAAGAATGGATAATTGCAACCCACAGGTCTCCTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | GAAGGGCTTGGGGAAAATCTGAAGGAGACCTGTGGGTaGCAATTATCCATTCTTTGTGGCCTCCGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: EGLGENLKETCG*QLSILCGLRRP Trigger: GGGCCTCCGGAGGCCACAAAGAATGGATAATTGCAACCCACAGGTCTCCTTCAGATTTTCCCCAAGCCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 72 bp | GCCTCTGGGCATCCAGGCTACAGGCGTTGGTTACCATaGTACGCAGCATCTAAGATGAATCTCAGAGACACT | + |
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Preference number: 6 (lower is better) Translates to: ASGHPGYRRWLP*YAASKMNLRDT Trigger: AGTGTCTCTGAGATTCATCTTAGATGCTGCGTAGCATGGTAACCAACGCCTGTAGCCTGGATGCCCAGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS CAA 72 bp | TGGCATGGGGAGAAGCTTTGGGAGCCTCTAGTCCACTaGAGCTTTAGTACCCAGACCTACCTTTCTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: WHGEKLWEPLVH*SFSTQTYLSGE Trigger: CTCTCCAGAAAGGTAGGTCTGGGTACTAAAGCTCAAGTGGACTAGAGGCTCCCAAAGCTTCTCCCCATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 90 bp | TGGGGAAAATCTGAAGGAGACCTGTGGGTTGCAATTATCCATTCTTaGTGGCCTCCGGAGGCCCTGGGTACCTTGGTGATCACAGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: WGKSEGDLWVAIIHS*WPPEALGTLVITVR Trigger: TCTCACTGTGATCACCAAGGTACCCAGGGCCTCCGGAGGCCACAAAGAATGGATAATTGCAACCCACAGGTCTCCTTCAGATTTTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS TCA 72 bp | CCAACAGAAAGAGGCAACTGCAGGCTAATCTTGGGGTaGTTAAAGGAAGAAACGTTCTCCCGCTGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PTERGNCRLILG*LKEETFSRWCR Trigger: CCTGCACCAGCGGGAGAACGTTTCTTCCTTTAATCACCCCAAGATTAGCCTGCAGTTGCCTCTTTCTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 72 bp | CACCCTGAAAAACTTACTGGCATTAAAACCTTGCCATaGACACTGGTCCCTGCCCAGCTTTGGGTCCAACAC | + |
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Preference number: 6 (lower is better) Translates to: HPEKLTGIKTLP*TLVPAQLWVQH Trigger: GTGTTGGACCCAAAGCTGGGCAGGGACCAGTGTGCATGGCAAGGTTTTAATGCCAGTAAGTTTTTCAGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | ACCAGAAGGGCTTGGGGAAAATCTGAAGGAGACCTGTaGGTTGCAATTATCCATTCTTTGTGGCCTCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: TRRAWGKSEGDL*VAIIHSLWPPE Trigger: CTCCGGAGGCCACAAAGAATGGATAATTGCAACCCACAGGTCTCCTTCAGATTTTCCCCAAGCCCTTCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | CTCCCCACCATAGAGCATTTGCTGACCAGAAGGGCTTaGGGAAAATCTGAAGGAGACCTGTGGGTTGCAATT | + |
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Preference number: 6 (lower is better) Translates to: LPTIEHLLTRRA*GKSEGDLWVAI Trigger: AATTGCAACCCACAGGTCTCCTTCAGATTTTCCCCAAGCCCTTCTGGTCAGCAAATGCTCTATGGTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | AGGGCTCCACATGGGCATCACATAGGTGCCTTTGAATaGCACGAGTCTCCTACTTCACACTTGGGCAACAGT | + |
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Preference number: 6 (lower is better) Translates to: RAPHGHHIGAFE*HESPTSHLGNS Trigger: ACTGTTGCCCAAGTGTGAAGTAGGAGACTCGTGCAATTCAAAGGCACCTATGTGATGCCCATGTGGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | AGGCCCCATCCATGCTCGCTGCTACCTAAGTCGATTTaGTTCCCTCACTTGAGCTTCTTTATGAGGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RPHPCSLLPKSI*FPHLSFFMRAG Trigger: TCCTGCCCTCATAAAGAAGCTCAAGTGAGGGAACAAAATCGACTTAGGTAGCAGCGAGCATGGATGGGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 90 bp | GCTAAGAAAAGGGCTCCACATGGGCATCACATAGGTGCCTTTGAATaGCACGAGTCTCCTACTTCACACTTGGGCAACAGTCCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: AKKRAPHGHHIGAFE*HESPTSHLGNSPQT Trigger: TGTCTGAGGACTGTTGCCCAAGTGTGAAGTAGGAGACTCGTGCAATTCAAAGGCACCTATGTGATGCCCATGTGGAGCCCTTTTCTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 90 bp | CCCCATCCATGCTCGCTGCTACCTAAGTCGATTTTGTTCCCTCACTaGAGCTTCTTTATGAGGGCAGGACCATGTGTTCTGGAAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PHPCSLLPKSILFPH*SFFMRAGPCVLEAS Trigger: AGAAGCTTCCAGAACACATGGTCCTGCCCTCATAAAGAAGCTCAAGTGAGGGAACAAAATCGACTTAGGTAGCAGCGAGCATGGATGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS TCA 72 bp | GAAAAGGGCTCCACATGGGCATCACATAGGTGCCTTTaGATTGCACGAGTCTCCTACTTCACACTTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: EKGSTWASHRCL*IARVSYFTLGQ Trigger: TTGCCCAAGTGTGAAGTAGGAGACTCGTGCAATTCAAAGGCACCTATGTGATGCCCATGTGGAGCCCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS TCA 72 bp | AGGAGCGGTGAGGTCCACATGCTGTTCTGTCAGTTATaGGTCCAAGACAAGGAGCTGCATCAGCATATAACA | + |
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Preference number: 6 (lower is better) Translates to: RSGEVHMLFCQL*VQDKELHQHIT Trigger: TGTTATATGCTGATGCAGCTCCTTGTCTTGGACTCATAACTGACAGAACAGCATGTGGACCTCACCGCTCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 72 bp | ATAGGCCTCTGGGAGTCCTGTAGAGACCAAACCACATaGATTATTGGAGGAGACAGCATAAGGGGGTTAACA | + |
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Preference number: 6 (lower is better) Translates to: IGLWESCRDQTT*IIGGDSIRGLT Trigger: TGTTAACCCCCTTATGCTGTCTCCTCCAATAATGCATGTGGTTTGGTCTCTACAGGACTCCCAGAGGCCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | GGTGCCTTTGAATTGCACGAGTCTCCTACTTCACACTaGGGCAACAGTCCTCAGACAGAGAATGCTTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: GAFELHESPTSH*GNSPQTENAFG Trigger: ACCAAAAGCATTCTCTGTCTGAGGACTGTTGCCCAAGTGTGAAGTAGGAGACTCGTGCAATTCAAAGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | GTGCCTTTGAATTGCACGAGTCTCCTACTTCACACTTaGGCAACAGTCCTCAGACAGAGAATGCTTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: VPLNCTSLLLHT*ATVLRQRMLLV Trigger: AACCAAAAGCATTCTCTGTCTGAGGACTGTTGCCCAAGTGTGAAGTAGGAGACTCGTGCAATTCAAAGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CCA 72 bp | CTTTATGAGGGCAGGACCATGTGTTCTGGAAGCTTCTaGGCTCATATTCCAGCTCCACAACAAGAGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LYEGRTMCSGSF*AHIPAPQQERK Trigger: TTTTCTCTCTTGTTGTGGAGCTGGAATATGAGCCCAGAAGCTTCCAGAACACATGGTCCTGCCCTCATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | TACAGTGACATCTTAAGATCATTGCCAAGGCAGGTCTaGCATGCACAAAAATGCCCAGCTGGTCTGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: YSDILRSLPRQV*HAQKCPAGLCS Trigger: GGAACACAGACCAGCTGGGCATTTTTGTGCATGCAAGACCTGCCTTGGCAATGATCTTAAGATGTCACTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS CAA 90 bp | TGTAAACGCTACAGTGACATCTTAAGATCATTGCCAAGGCAGGTCTaGCATGCACAAAAATGCCCAGCTGGTCTGTGTTCCAAAATCCTC | + |
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Preference number: 6 (lower is better) Translates to: CKRYSDILRSLPRQV*HAQKCPAGLCSKIL Trigger: GAGGATTTTGGAACACAGACCAGCTGGGCATTTTTGTGCATGCAAGACCTGCCTTGGCAATGATCTTAAGATGTCACTGTAGCGTTTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS CAA 90 bp | AAGACTCCCGTGGAATGTTGGGATTTCTTACTCATCAAAGCTCTCTaGGTGACAATGACAGAAACAGAACTCAGACAAGTTGGGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KTPVECWDFLLIKAL*VTMTETELRQVGRE Trigger: CTCTCTCCCAACTTGTCTGAGTTCTGTTTCTGTCATTGTCACCAAGAGAGCTTTGATGAGTAAGAAATCCCAACATTCCACGGGAGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 90 bp | TTTGCTAGTTTCCTTCCTTACGTTGACATAAAACAGCATTTGGTTTaGATCCAACACAGAAAAACCTCACATCAGTACTGGAGGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: FASFLPYVDIKQHLV*IQHRKTSHQYWRER Trigger: CCGCTCCCTCCAGTACTGATGTGAGGTTTTTCTGTGTTGGATCAAAACCAAATGCTGTTTTATGTCAACGTAAGGAAGGAAACTAGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS CAA 72 bp | AAAAGATGTAAACGCTACAGTGACATCTTAAGATCATaGCCAAGGCAGGTCTTGCATGCACAAAAATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KRCKRYSDILRS*PRQVLHAQKCP Trigger: TGGGCATTTTTGTGCATGCAAGACCTGCCTTGGCAATGATCTTAAGATGTCACTGTAGCGTTTACATCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000626518.2 ENST00000630252.1 |
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| CDS CAA 90 bp | GAGGACTCACTTAAAAATTTAAACCACCAAGACTCCCGTGGAATGTaGGGATTTCTTACTCATCAAAGCTCTCTTGGTGACAATGACAGA | + |
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Preference number: 6 (lower is better) Translates to: EDSLKNLNHQDSRGM*GFLTHQSSLGDNDR Trigger: TCTGTCATTGTCACCAAGAGAGCTTTGATGAGTAAGAAATCCCAACATTCCACGGGAGTCTTGGTGGTTTAAATTTTTAAGTGAGTCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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| CDS GCA 72 bp | GTGCTGAGTGAAGCCGGTCTTAAAGATGTTACACACTaGTTCGTTCAATTTACTTGTCATTCTCCAAAACAT | + |
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Preference number: 6 (lower is better) Translates to: VLSEAGLKDVTH*FVQFTCHSPKH Trigger: ATGTTTTGGAGAATGACAAGTAAATTGAACGAAGCAGTGTGTAACATCTTTAAGACCGGCTTCACTCAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626518.2 |
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| CDS CAA 72 bp | CTTAAAAATTTAAACCACCAAGACTCCCGTGGAATGTaGGGATTTCTTACTCATCAAAGCTCTCTTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LKNLNHQDSRGM*GFLTHQSSLGD Trigger: GTCACCAAGAGAGCTTTGATGAGTAAGAAATCCCAACATTCCACGGGAGTCTTGGTGGTTTAAATTTTTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000630252.1 |
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