Pregenerated sensors for LINC01120 (Homo sapiens)
Ensembl gene IDs: ENSG00000223631Ensembl transcript IDs: ENST00000437751.2, ENST00000653180.1, ENST00000661362.1, ENST00000662267.1, ENST00000663072.1, ENST00000664380.1, ENST00000666196.1, ENST00000668661.1, ENST00000669881.1, ENST00000670748.1, ENST00000671078.1, ENST00000671275.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCTCTGGAACCAGGGATAAGGGTCCCAGCCTGGGGAATCCAGCCTaGCGTCTTCAAGACTATCACCAAGCTGGACTTGTGGGACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGTRDKGPSLGNPA*RLQDYHQAGLVGQA Trigger: TGCTTGTCCCACAAGTCCAGCTTGGTGATAGTCTTGAAGACGGCAGGCTGGATTCCCCAGGCTGGGACCCTTATCCCTGGTTCCAGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 90 bp | TCAGATCTGCTCTCCTCTCTGGAACCAGGGATAAGGGTCCCAGCCTaGGGAATCCAGCCTGCCGTCTTCAAGACTATCACCAAGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SDLLSSLEPGIRVPA*GIQPAVFKTITKLD Trigger: GTCCAGCTTGGTGATAGTCTTGAAGACGGCAGGCTGGATTCCCCAGGCTGGGACCCTTATCCCTGGTTCCAGAGAGGAGAGCAGATCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS TCA 90 bp | CGGAGCACCACGTCTCTGAAACTGAGCTGGCGGACCGTCGATTTGTaGCGGACAGTGGATTCTTTGGAGCCCTCAGGATCTTGCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSTTSLKLSWRTVDL*RTVDSLEPSGSCIL Trigger: CAAGATGCAAGATCCTGAGGGCTCCAAAGAATCCACTGTCCGTCACAAATCGACGGTCCGCCAGCTCAGTTTCAGAGACGTGGTGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS GCA 90 bp | AAAGGAGACCATCAGGAGAGCCCTTCAGATGGCTCCCTGCCAGGGTaGACACAGGAATGGTCTGGAATCCTTCTGCTCCCAAGAGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGDHQESPSDGSLPG*TQEWSGILLLPRVS Trigger: ACTCACTCTTGGGAGCAGAAGGATTCCAGACCATTCCTGTGTGCACCCTGGCAGGGAGCCATCTGAAGGGCTCTCCTGATGGTCTCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670748.1 |
||
| CDS CCA 90 bp | CCAGCAGTCTCCCAGGTGGCAGTTGAAACCCAGTGGCAGTTGGGATaGAGGGCAGGATATACATCATCACATGACCTCCGTGACAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAVSQVAVETQWQLG*RAGYTSSHDLRDRS Trigger: TGACCTGTCACGGAGGTCATGTGATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS CCA 90 bp | AAAGCGGCAAAGGCCACCTCCCATCTTTACCAGCAGTCTCCCAGGTaGCAGTTGAAACCCAGTGGCAGTTGGGATGGAGGGCAGGATATA | + |
|
Preference number: 5 (lower is better) Translates to: KAAKATSHLYQQSPR*QLKPSGSWDGGQDI Trigger: TATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAGGTGGCCTTTGCCGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS TCA 90 bp | CAAAGGCCACCTCCCATCTTTACCAGCAGTCTCCCAGGTGGCAGTTaGAACCCAGTGGCAGTTGGGATGGAGGGCAGGATATACATCATC | + |
|
Preference number: 5 (lower is better) Translates to: QRPPPIFTSSLPGGS*NPVAVGMEGRIYII Trigger: GATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAGGTGGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS CCA 90 bp | CTCCCATCTTTACCAGCAGTCTCCCAGGTGGCAGTTGAAACCCAGTaGCAGTTGGGATGGAGGGCAGGATATACATCATCACATGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSLPAVSQVAVETQ*QLGWRAGYTSSHDL Trigger: GAGGTCATGTGATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS GCA 90 bp | CCCCAGGCTTCTCTCATAGTTCACTTTGATTACTGCAATGCCTCCTaGCTGGATAGTTTGTATCTCATTCTCCCTCTCCCCACTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PQASLIVHFDYCNAS*LDSLYLILPLPTSC Trigger: ACAGGAAGTGGGGAGAGGGAGAATGAGATACAAACTATCCAGGCAGGAGGCATTGCAGTAATCAAAGTGAACTATGAGAGAAGCCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS CCA 90 bp | GTGGTATTTCCTTCTAACCTGCTTCTCTCTTGTGGGCCGCCTGTCTaGGAATGGTTAGATCCTTTACTCAGGTACTCAAGCCAAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VVFPSNLLLSCGPPV*EWLDPLLRYSSQEE Trigger: CTCTTCTTGGCTTGAGTACCTGAGTAAAGGATCTAACCATTCCCAGACAGGCGGCCCACAAGAGAGAAGCAGGTTAGAAGGAAATACCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 90 bp | TTTCCTTCTAACCTGCTTCTCTCTTGTGGGCCGCCTGTCTGGGAATaGTTAGATCCTTTACTCAGGTACTCAAGCCAAGAAGAGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPSNLLLSCGPPVWE*LDPLLRYSSQEEFS Trigger: TGAGAACTCTTCTTGGCTTGAGTACCTGAGTAAAGGATCTAACCATTCCCAGACAGGCGGCCCACAAGAGAGAAGCAGGTTAGAAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 90 bp | TGTGACGGACAGTGGATTCTTTGGAGCCCTCAGGATCTTGCATCTTaGAGGCAACACTCGTATTTGGTATCAAGATCTCCTGATATGATG | + |
|
Preference number: 5 (lower is better) Translates to: CDGQWILWSPQDLAS*RQHSYLVSRSPDMM Trigger: CATCATATCAGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGGGCTCCAAAGAATCCACTGTCCGTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CCA 90 bp | ACATGTTCATATTCTATCCCTTGCTCTTGGAGTCATAAGCTGCTTTaGGACAAGGACTGCATATATCCATCCCTGCAACAGTTTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TCSYSIPCSWSHKLL*DKDCIYPSLQQFPA Trigger: TGCTGGAAACTGTTGCAGGGATGGATATATGCAGTCCTTGTCCCAAAGCAGCTTATGACTCCAAGAGCAAGGGATAGAATATGAACATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS GCA 90 bp | GACCAGCCTGCCAGTAATTCATCACTGACATGCTTCATAATGTACTaGCTCATGGTGGCTATGATGAAATACTGTTACTGTGAGTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: DQPASNSSLTCFIMY*LMVAMMKYCYCEFC Trigger: ACAAAACTCACAGTAACAGTATTTCATCATAGCCACCATGAGGCAGTACATTATGAAGCATGTCAGTGATGAATTACTGGCAGGCTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 ENST00000671078.1 |
||
| CDS CCA 90 bp | CATGGAATATATTCCTGCCAATTCTGCACTGAATTATACACTCACTaGAAATCCCCTATATCAGCCCTAATGCTTCCTCCACCACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HGIYSCQFCTELYTH*KSPISALMLPPPQS Trigger: ACTTTGTGGTGGAGGAAGCATTAGGGCTGATATAGGGGATTTCCAGTGAGTGTATAATTCAGTGCAGAATTGGCAGGAATATATTCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 ENST00000671078.1 |
||
| CDS GCA 90 bp | ATTGTTGGATCAAATAGTGATTCTACGTTTGACCTTTTGAGAAACTaGCAAACGATGATCCAGAAGAGGCGCCATTTTACATTCCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IVGSNSDSTFDLLRN*QTMIQKRRHFTFPP Trigger: TGGTGGGAATGTAAAATGGCGCCTCTTCTGGATCATCGTTTGGCAGTTTCTCAAAAGGTCAAACGTAGAATCACTATTTGATCCAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664380.1 ENST00000671078.1 |
||
| CDS TCA 90 bp | TCTTGCATCTTGGAGGCAACACTCGTATTTGGTATCAAGATCTCCTaGTATGATGAAGGCAGTATTGTTGTGTTTCTTCTGGATCTATTC | + |
|
Preference number: 5 (lower is better) Translates to: SCILEATLVFGIKIS*YDEGSIVVFLLDLF Trigger: GAATAGATCCAGAAGAAACACAACAATACTGCCTTCATCATATCAGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS GCA 90 bp | GTCTTCAAGACTATCACCAAGCTGGACTTGTGGGACAAGCAAAAATaGCACACAGCTTTCATATCATTTTTAAGTTTCCTTTGTGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VFKTITKLDLWDKQK*HTAFISFLSFLCVD Trigger: ATCAACACAAAGGAAACTTAAAAATGATATGAAAGCTGTGTGGCATTTTTGCTTGTCCCACAAGTCCAGCTTGGTGATAGTCTTGAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS GCA 72 bp | CTGGGCCACCCTCCTTCAGATGGCTCCCTGCCAGGGTaGACACAGGAATGGTCTGGAATCCTTCTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGHPPSDGSLPG*TQEWSGILLLP Trigger: TGGGAGCAGAAGGATTCCAGACCATTCCTGTGTGCACCCTGGCAGGGAGCCATCTGAAGGAGGGTGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663072.1 |
||
| CDS CCA 72 bp | TGTGAAGAGCCACAGCCTATTCCGAGGAAGTCTCTCTaGTCCGCTCCCCTCCAGGTGGTCCCTTCAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: CEEPQPIPRKSL*SAPLQVVPSDG Trigger: GCCATCTGAAGGGACCACCTGGAGGGGAGCGGACCAGAGAGACTTCCTCGGAATAGGCTGTGGCTCTTCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS GCA 72 bp | CATCAGGAGAGCCCTTCAGATGGCTCCCTGCCAGGGTaGACACAGGAATGGTCTGGAATCCTTCTGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HQESPSDGSLPG*TQEWSGILLLP Trigger: TGGGAGCAGAAGGATTCCAGACCATTCCTGTGTGCACCCTGGCAGGGAGCCATCTGAAGGGCTCTCCTGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670748.1 |
||
| CDS CCA 72 bp | AAGGCCACCTCCCATCTTTACCAGCAGTCTCCCAGGTaGCAGTTGAAACCCAGTGGCAGTTGGGATGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KATSHLYQQSPR*QLKPSGSWDGG Trigger: CCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAGGTGGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 |
||
| CDS CCA 72 bp | CTCTCCTCTCTGGAACCAGGGATAAGGGTCCCAGCCTaGGGAATCCAGCCTGCCGTCTTCAAGACTATCACC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLEPGIRVPA*GIQPAVFKTIT Trigger: GGTGATAGTCTTGAAGACGGCAGGCTGGATTCCCCAGGCTGGGACCCTTATCCCTGGTTCCAGAGAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS TCA 72 bp | CCTCCCATCTTTACCAGCAGTCTCCCAGGTGGCAGTTaGAACCCAGTGGCAGTTGGGATGGAGGGCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: PPIFTSSLPGGS*NPVAVGMEGRI Trigger: TATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS CCA 72 bp | TGTGAAGAGCCACAGCCTATTCCGAGGAAGTCTCTCTaGTCCGCTCCCCTCCAGGTGGTCCCTGAAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CEEPQPIPRKSL*SAPLQVVPEIF Trigger: GAAGATTTCAGGGACCACCTGGAGGGGAGCGGACCAGAGAGACTTCCTCGGAATAGGCTGTGGCTCTTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000437751.2 ENST00000664380.1 ENST00000668661.1 |
||
| CDS CCA 72 bp | TTCCGAGGAAGTCTCTCTGGTCCGCTCCCCTCCAGGTaGTCCCTGAAATCTAGGAAACGTAGAGTCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: FRGSLSGPLPSR*SLKSRKRRVTV Trigger: GACAGTGACTCTACGTTTCCTAGATTTCAGGGACCACCTGGAGGGGAGCGGACCAGAGAGACTTCCTCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000662267.1 ENST00000663072.1 ENST00000666196.1 ENST00000669881.1 ENST00000670748.1 ENST00000671275.1 |
||
| CDS CAA 90 bp | GCAAAGGCCACCTCCCATCTTTACCAGCAGTCTCCCAGGTGGCAGTaGAAACCCAGTGGCAGTTGGGATGGAGGGCAGGATATACATCAT | + |
|
Preference number: 6 (lower is better) Translates to: AKATSHLYQQSPRWQ*KPSGSWDGGQDIHH Trigger: ATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAAAGATGGGAGGTGGCCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS TCA 72 bp | ACGTCTCTGAAACTGAGCTGGCGGACCGTCGATTTGTaGCGGACAGTGGATTCTTTGGAGCCCTCAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: TSLKLSWRTVDL*RTVDSLEPSGS Trigger: AGATCCTGAGGGCTCCAAAGAATCCACTGTCCGTCACAAATCGACGGTCCGCCAGCTCAGTTTCAGAGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS TCA 72 bp | GATGGGAGCTTAGAGCTGCCTTCCCTGCCATTTTGCTaGCACCACTGCAATGGAGCATTCTTGACTCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DGSLELPSLPFC*HHCNGAFLTPL Trigger: CAGGGGAGTCAAGAATGCTCCATTGCAGTGGTGTCAGCAAAATGGCAGGGAAGGCAGCTCTAAGCTCCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 72 bp | TCCCAGGTGGCAGTTGAAACCCAGTGGCAGTTGGGATaGAGGGCAGGATATACATCATCACATGACCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: SQVAVETQWQLG*RAGYTSSHDLR Trigger: ACGGAGGTCATGTGATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS CCA 72 bp | TTACCAGCAGTCTCCCAGGTGGCAGTTGAAACCCAGTaGCAGTTGGGATGGAGGGCAGGATATACATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: LPAVSQVAVETQ*QLGWRAGYTSS Trigger: TGATGATGTATATCCTGCCCTCCATCCCAACTGCCACTGGGTTTCAACTGCCACCTGGGAGACTGCTGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000663072.1 |
||
| CDS CAA 72 bp | GAAGGATGGGAGCTTAGAGCTGCCTTCCCTGCCATTTaGCTGACACCACTGCAATGGAGCATTCTTGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGWELRAAFPAI*LTPLQWSILDS Trigger: GGAGTCAAGAATGCTCCATTGCAGTGGTGTCAGCAAAATGGCAGGGAAGGCAGCTCTAAGCTCCCATCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 90 bp | ATTCCTATGGAAGGATGGGAGCTTAGAGCTGCCTTCCCTGCCATTTaGCTGACACCACTGCAATGGAGCATTCTTGACTCCCCTGCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: IPMEGWELRAAFPAI*LTPLQWSILDSPAL Trigger: TAGGGCAGGGGAGTCAAGAATGCTCCATTGCAGTGGTGTCAGCAAAATGGCAGGGAAGGCAGCTCTAAGCTCCCATCCTTCCATAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 72 bp | CCTTCTAACCTGCTTCTCTCTTGTGGGCCGCCTGTCTaGGAATGGTTAGATCCTTTACTCAGGTACTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PSNLLLSCGPPV*EWLDPLLRYSS Trigger: GCTTGAGTACCTGAGTAAAGGATCTAACCATTCCCAGACAGGCGGCCCACAAGAGAGAAGCAGGTTAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 72 bp | AACCTGCTTCTCTCTTGTGGGCCGCCTGTCTGGGAATaGTTAGATCCTTTACTCAGGTACTCAAGCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NLLLSCGPPVWE*LDPLLRYSSQE Trigger: TTCTTGGCTTGAGTACCTGAGTAAAGGATCTAACCATTCCCAGACAGGCGGCCCACAAGAGAGAAGCAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 72 bp | GAATCCAGCCTGCCGTCTTCAAGACTATCACCAAGCTaGACTTGTGGGACAAGCAAAAATGCCACACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESSLPSSRLSPS*TCGTSKNATQL Trigger: AAGCTGTGTGGCATTTTTGCTTGTCCCACAAGTCCAGCTTGGTGATAGTCTTGAAGACGGCAGGCTGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 90 bp | CGTCGATTTGTGACGGACAGTGGATTCTTTGGAGCCCTCAGGATCTaGCATCTTGGAGGCAACACTCGTATTTGGTATCAAGATCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRFVTDSGFFGALRI*HLGGNTRIWYQDLL Trigger: CAGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGGGCTCCAAAGAATCCACTGTCCGTCACAAATCGACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS TCA 72 bp | ATGACCTCCGTGACAGGTCATCACAGAATATTCAAATaGACACAGGAACACGTGCCACACTCTGGGGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MTSVTGHHRIFK*TQEHVPHSGVQ Trigger: TTGGACCCCAGAGTGTGGCACGTGTTCCTGTGTTCATTTGAATATTCTGTGATGACCTGTCACGGAGGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437751.2 |
||
| CDS TCA 72 bp | TGCCATTTTGCTGACACCACTGCAATGGAGCATTCTTaGCTCCCCTGCCCTAAGAGTTTGACTTACTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CHFADTTAMEHS*LPCPKSLTYSA Trigger: TGCAGAGTAAGTCAAACTCTTAGGGCAGGGGAGTCAAGAATGCTCCATTGCAGTGGTGTCAGCAAAATGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 72 bp | ACAGAGATGATGAATACCTTCTTCAGACAGCCTCGCTaGCCAGAATCGCTGAGTCCGTTTTCAGAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TEMMNTFFRQPR*PESLSPFSERK Trigger: CTTCCTCTCTGAAAACGGACTCAGCGATTCTGGCAAGCGAGGCTGTCTGAAGAAGGTATTCATCATCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664380.1 |
||
| CDS CAA 90 bp | CTCATAGTTCACTTTGATTACTGCAATGCCTCCTGCCTGGATAGTTaGTATCTCATTCTCCCTCTCCCCACTTCCTGTATGCATCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LIVHFDYCNASCLDS*YLILPLPTSCMHLP Trigger: GGGCAGATGCATACAGGAAGTGGGGAGAGGGAGAATGAGATACAAACTATCCAGGCAGGAGGCATTGCAGTAATCAAAGTGAACTATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS CCA 72 bp | CAGTGGATTCTTTGGAGCCCTCAGGATCTTGCATCTTaGAGGCAACACTCGTATTTGGTATCAAGATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QWILWSPQDLAS*RQHSYLVSRSP Trigger: AGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGGGCTCCAAAGAATCCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CCA 72 bp | CCTGCCGTCTTCAAGACTATCACCAAGCTGGACTTGTaGGACAAGCAAAAATGCCACACAGCTTTCATATCA | + |
|
Preference number: 6 (lower is better) Translates to: PAVFKTITKLDL*DKQKCHTAFIS Trigger: TGATATGAAAGCTGTGTGGCATTTTTGCTTGTCCCACAAGTCCAGCTTGGTGATAGTCTTGAAGACGGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 72 bp | ACAGTGGATTCTTTGGAGCCCTCAGGATCTTGCATCTaGGAGGCAACACTCGTATTTGGTATCAAGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVDSLEPSGSCI*EATLVFGIKIS Trigger: GGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGGGCTCCAAAGAATCCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS GCA 72 bp | TGCTCTTGGAGTCATAAGCTGCTTTGGGACAAGGACTaGATATATCCATCCCTGCAACAGTTTCCAGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CSWSHKLLWDKD*IYPSLQQFPAY Trigger: ATATGCTGGAAACTGTTGCAGGGATGGATATATGCAGTCCTTGTCCCAAAGCAGCTTATGACTCCAAGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS GCA 72 bp | GTTCATATTCTATCCCTTGCTCTTGGAGTCATAAGCTaGTTTGGGACAAGGACTGCATATATCCATCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VHILSLALGVIS*FGTRTAYIHPC Trigger: GCAGGGATGGATATATGCAGTCCTTGTCCCAAAGCAGCTTATGACTCCAAGAGCAAGGGATAGAATATGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS CCA 72 bp | TATTCTATCCCTTGCTCTTGGAGTCATAAGCTGCTTTaGGACAAGGACTGCATATATCCATCCCTGCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: YSIPCSWSHKLL*DKDCIYPSLQQ Trigger: CTGTTGCAGGGATGGATATATGCAGTCCTTGTCCCAAAGCAGCTTATGACTCCAAGAGCAAGGGATAGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437751.2 ENST00000671078.1 |
||
| CDS CAA 72 bp | CCCGGTTCTCACAAAGTTGGTTCTGACAGTGTCTGGTaGTTTATTCAACATTCCTATGGAAGGATGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSHKVGSDSVW*FIQHSYGRMGA Trigger: AGCTCCCATCCTTCCATAGGAATGTTGAATAAACAACCAGACACTGTCAGAACCAACTTTGTGAGAACCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 90 bp | CTTTGGAGCCCTCAGGATCTTGCATCTTGGAGGCAACACTCGTATTaGGTATCAAGATCTCCTGATATGATGAAGGCAGTATTGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LWSPQDLASWRQHSY*VSRSPDMMKAVLLC Trigger: ACACAACAATACTGCCTTCATCATATCAGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGGGCTCCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS TCA 72 bp | CAATGGAGCATTCTTGACTCCCCTGCCCTAAGAGTTTaGCTTACTCTGCATTCAAATGTCCTCTACCTAACA | + |
|
Preference number: 6 (lower is better) Translates to: QWSILDSPALRV*LTLHSNVLYLT Trigger: TGTTAGGTAGAGGACATTTGAATGCAGAGTAAGTCAAACTCTTAGGGCAGGGGAGTCAAGAATGCTCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 72 bp | CCTCAGGATCTTGCATCTTGGAGGCAACACTCGTATTaGGTATCAAGATCTCCTGATATGATGAAGGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: PQDLASWRQHSY*VSRSPDMMKAV Trigger: TACTGCCTTCATCATATCAGGAGATCTTGATACCAAATACGAGTGTTGCCTCCAAGATGCAAGATCCTGAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CCA 72 bp | TATTCCTGCCAATTCTGCACTGAATTATACACTCACTaGAAATCCCCTATATCAGCCCTAATGCTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: YSCQFCTELYTH*KSPISALMLPP Trigger: TGGAGGAAGCATTAGGGCTGATATAGGGGATTTCCAGTGAGTGTATAATTCAGTGCAGAATTGGCAGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 ENST00000671078.1 |
||
| CDS CCA 72 bp | TTTCCCGGTTCTCACAAAGTTGGTTCTGACAGTGTCTaGTTGTTTATTCAACATTCCTATGGAAGGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FPGSHKVGSDSV*LFIQHSYGRMG Trigger: TCCCATCCTTCCATAGGAATGTTGAATAAACAACCAGACACTGTCAGAACCAACTTTGTGAGAACCGGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CCA 72 bp | CTATTCAGAAGACTTTGGCCTGTAATCCCCCTTTCATaGAATGTCTCTTACCGTATTTGGTATCAAGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LFRRLWPVIPLS*NVSYRIWYQDL Trigger: GAGATCTTGATACCAAATACGGTAAGAGACATTCCATGAAAGGGGGATTACAGGCCAAAGTCTTCTGAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653180.1 |
||
| CDS CAA 90 bp | GTTTCCTTTGTGTTGATCCAGCATTCTTTTAGTTGCCGTACACCTTaGATTATTTTCCCGGTTCTCACAAAGTTGGTTCTGACAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VSFVLIQHSFSCRTP*IIFPVLTKLVLTVS Trigger: AGACACTGTCAGAACCAACTTTGTGAGAACCGGGAAAATAATCAAAGGTGTACGGCAACTAAAAGAATGCTGGATCAACACAAAGGAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS TCA 72 bp | TCTGGAAAGATTAAAACAGACAAGCATAATCATTTGTaGATCAGATCTGCTCTCCTCTCTGGAACCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGKIKTDKHNHL*IRSALLSGTRD Trigger: ATCCCTGGTTCCAGAGAGGAGAGCAGATCTGATTCACAAATGATTATGCTTGTCTGTTTTAATCTTTCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS GCA 72 bp | GCCAGTAATTCATCACTGACATGCTTCATAATGTACTaGCTCATGGTGGCTATGATGAAATACTGTTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASNSSLTCFIMY*LMVAMMKYCYC Trigger: ACAGTAACAGTATTTCATCATAGCCACCATGAGGCAGTACATTATGAAGCATGTCAGTGATGAATTACTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 ENST00000671078.1 |
||
| CDS GCA 72 bp | TCAAATAGTGATTCTACGTTTGACCTTTTGAGAAACTaGCAAACGATGATCCAGAAGAGGCGCCATTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: SNSDSTFDLLRN*QTMIQKRRHFT Trigger: TGTAAAATGGCGCCTCTTCTGGATCATCGTTTGGCAGTTTCTCAAAAGGTCAAACGTAGAATCACTATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664380.1 ENST00000671078.1 |
||
| CDS CCA 72 bp | CCTGATATGATGAAGGCAGTATTGTTGTGTTTCTTCTaGATCTATTCTATGGAAGAGTGTGTACAAAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PDMMKAVLLCFF*IYSMEECVQNW Trigger: CCAGTTTTGTACACACTCTTCCATAGAATAGATCCAGAAGAAACACAACAATACTGCCTTCATCATATCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000653180.1 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CAA 72 bp | AATACTGTTACTGTGAGTTTTGTCCCTCCACTAGATTaGCATTTTCCTGAAGGTAACAACCTTCATCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: NTVTVSFVPPLD*HFPEGNNLHQP Trigger: TGGTTGATGAAGGTTGTTACCTTCAGGAAAATGCAAATCTAGTGGAGGGACAAAACTCACAGTAACAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000437751.2 ENST00000663072.1 ENST00000668661.1 ENST00000671078.1 |
||
| CDS CAA 72 bp | CGTACACCTTTGATTATTTTCCCGGTTCTCACAAAGTaGGTTCTGACAGTGTCTGGTTGTTTATTCAACATT | + |
|
Preference number: 6 (lower is better) Translates to: RTPLIIFPVLTK*VLTVSGCLFNI Trigger: AATGTTGAATAAACAACCAGACACTGTCAGAACCAACTTTGTGAGAACCGGGAAAATAATCAAAGGTGTACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671078.1 |
||
| CDS CAA 90 bp | CACTCGTATTTGGTATCAAGATCTCCTGATATGATGAAGGCAGTATaGTTGTGTTTCTTCTGGATCTATTCTATGGAAGAGTGTGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: HSYLVSRSPDMMKAV*LCFFWIYSMEECVQ Trigger: TTGTACACACTCTTCCATAGAATAGATCCAGAAGAAACACAACAATACTGCCTTCATCATATCAGGAGATCTTGATACCAAATACGAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000437751.2 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CCA 72 bp | TTCATGTGTTGTTCATGCCTTGGTCTGCTATTGAGCTaGACTTCTGAAATAAACTGTGTTATGCTAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: FMCCSCLGLLLS*TSEINCVMLEI Trigger: TATTTCTAGCATAACACAGTTTATTTCAGAAGTCCAGCTCAATAGCAGACCAAGGCATGAACAACACATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000437751.2 ENST00000662267.1 ENST00000663072.1 ENST00000666196.1 ENST00000668661.1 ENST00000669881.1 ENST00000670748.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CAA 72 bp | GTATCAAGATCTCCTGATATGATGAAGGCAGTATTGTaGTGTTTCTTCTGGATCTATTCTATGGAAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VSRSPDMMKAVL*CFFWIYSMEEC Trigger: ACACTCTTCCATAGAATAGATCCAGAAGAAACACAACAATACTGCCTTCATCATATCAGGAGATCTTGATAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000437751.2 ENST00000653180.1 ENST00000661362.1 ENST00000662267.1 ENST00000663072.1 ENST00000664380.1 ENST00000668661.1 ENST00000669881.1 ENST00000671078.1 ENST00000671275.1 |
||
| CDS CAA 90 bp | TTACCGTATTTGGTATCAAGATCTCCTGATATGATGAAGGCAGTATaGTTGTGTTTCTTCTGGATCTATTCTATGGAAGAGTGTGTACAA | + |
|
Preference number: 6 (lower is better) Translates to: LPYLVSRSPDMMKAV*LCFFWIYSMEECVQ Trigger: TTGTACACACTCTTCCATAGAATAGATCCAGAAGAAACACAACAATACTGCCTTCATCATATCAGGAGATCTTGATACCAAATACGGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653180.1 |
||
| CDS CAA 72 bp | TACACGCATATGTTTGCATCCTTGTTTTCAATTCTTTaGGGGATATACCTAGGAGTAGAATTGTTGGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: YTHMFASLFSIL*GIYLGVELLDQ Trigger: TTGATCCAACAATTCTACTCCTAGGTATATCCCCAAAAGAATTGAAAACAAGGATGCAAACATATGCGTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000664380.1 ENST00000671078.1 |
||