Pregenerated sensors for LINC01099 (Homo sapiens)

Ensembl gene IDs: ENSG00000251504

Ensembl transcript IDs: ENST00000507011.1, ENST00000512527.1, ENST00000514736.1

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AAGGATGTCTGTGCACGCTGCCGCTGCCTCTGCTTCCCATTCTCATaGCGGTGGAGCTTCCTCCCCTCTGCTTTCTGGCTTTCTCAAATG	+
Preference number: 5 (lower is better) Translates to: KDVCARCRCLCFPFS*RWSFLPSAFWLSQM Trigger: CATTTGAGAAAGCCAGAAAGCAGAGGGGAGGAAGCTCCACCGTCATGAGAATGGGAAGCAGAGGCAGCGGCAGCGTGCACAGACATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512527.1 ENST00000514736.1
CDS CCA 90 bp	CTCATCTCACATCCACCCTGCACTTTGAGCTACATTGACTGTTGTTaGTTGAGAGAGTTGACATGGCTACTCAGCATCCTTCTGGGAGGC	+
Preference number: 5 (lower is better) Translates to: LISHPPCTLSYIDCC*LRELTWLLSILLGG Trigger: GCCTCCCAGAAGGATGCTGAGTAGCCATGTCAACTCTCTCAACCAACAACAGTCAATGTAGCTCAAAGTGCAGGGTGGATGTGAGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507011.1
CDS TCA 90 bp	TCTCAAATGTCTCATCTCACATCCACCCTGCACTTTGAGCTACATTaGCTGTTGTTGGTTGAGAGAGTTGACATGGCTACTCAGCATCCT	+
Preference number: 5 (lower is better) Translates to: SQMSHLTSTLHFELH*LLLVERVDMATQHP Trigger: AGGATGCTGAGTAGCCATGTCAACTCTCTCAACCAACAACAGTCAATGTAGCTCAAAGTGCAGGGTGGATGTGAGATGAGACATTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507011.1
CDS TCA 90 bp	ATCAGTGAGTCTCTGTTCATTCTCAATTTTAAGCAGGACAAACAATaGAACAAGAAGGATAACCCAACTGGCCCTTTTCCCAGACATCAG	+
Preference number: 5 (lower is better) Translates to: ISESLFILNFKQDKQ*NKKDNPTGPFPRHQ Trigger: CTGATGTCTGGGAAAAGGGCCAGTTGGGTTATCCTTCTTGTTTCATTGTTTGTCCTGCTTAAAATTGAGAATGAACAGAGACTCACTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512527.1
CDS TCA 72 bp	CCCAGCTACTCGGGAGACAAAGGCAGGAGAACTGCTTaGACCTGGGTGGCGGAGGTTGCGGTGAGCCGAGAT	+
Preference number: 6 (lower is better) Translates to: PSYSGDKGRRTA*TWVAEVAVSRD Trigger: ATCTCGGCTCACCGCAACCTCCGCCACCCAGGTTCAAGCAGTTCTCCTGCCTTTGTCTCCCGAGTAGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000514736.1
CDS TCA 72 bp	TGTGCACGCTGCCGCTGCCTCTGCTTCCCATTCTCATaGCGGTGGAGCTTCCTCCCCTCTGCTTTCTGGCTT	+
Preference number: 6 (lower is better) Translates to: CARCRCLCFPFS*RWSFLPSAFWL Trigger: AAGCCAGAAAGCAGAGGGGAGGAAGCTCCACCGTCATGAGAATGGGAAGCAGAGGCAGCGGCAGCGTGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000512527.1 ENST00000514736.1
CDS GCA 72 bp	GGTGGCGGAGGTTGCGGTGAGCCGAGATCGCGCCATTaGACTCCAGCCTTTTCCCAGACATCAGTTTCTGTG	+
Preference number: 6 (lower is better) Translates to: GGGGCGEPRSRH*TPAFSQTSVSV Trigger: CACAGAAACTGATGTCTGGGAAAAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCGCAACCTCCGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000514736.1
CDS CCA 72 bp	CATCCACCCTGCACTTTGAGCTACATTGACTGTTGTTaGTTGAGAGAGTTGACATGGCTACTCAGCATCCTT	+
Preference number: 6 (lower is better) Translates to: HPPCTLSYIDCC*LRELTWLLSIL Trigger: AAGGATGCTGAGTAGCCATGTCAACTCTCTCAACCAACAACAGTCAATGTAGCTCAAAGTGCAGGGTGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507011.1

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