Pregenerated sensors for LINC01093 (Homo sapiens)
Ensembl gene IDs: ENSG00000249173Ensembl transcript IDs: ENST00000506479.6, ENST00000507183.2, ENST00000515864.2, ENST00000653105.1, ENST00000653828.1, ENST00000654928.1, ENST00000656892.1, ENST00000657719.1, ENST00000657860.1, ENST00000659755.1, ENST00000661671.1, ENST00000662297.1, ENST00000663526.1, ENST00000663695.1, ENST00000664938.1, ENST00000665575.1, ENST00000666149.1, ENST00000667903.1, ENST00000668530.1, ENST00000668573.1, ENST00000670177.1, ENST00000671675.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCCAGGCACCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTCCTGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQAPVLPLKSAGPHP*AEELLVSDVVLLRL Trigger: GAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGGTGCCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507183.2 |
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| CDS CCA 90 bp | AGCCAGGCACCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTCCTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SQAPVLPLKSAGPHP*AEELLVSDVVLLRL Trigger: CAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGGTGCCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS TCA 90 bp | AGGCCTGGACAGAGGCAGGGATTGAGCACGAGGTTGGCGAATGTCTaGCTCCCCACAGGCGAAGAAGGAAGAAGGCTGAAGGAGCCACGC | + |
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Preference number: 5 (lower is better) Translates to: RPGQRQGLSTRLANV*LPTGEEGRRLKEPR Trigger: GCGTGGCTCCTTCAGCCTTCTTCCTTCTTCGCCTGTGGGGAGTCAGACATTCGCCAACCTCGTGCTCAATCCCTGCCTCTGTCCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | TGCTGTCCTCCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTCCTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CCPPVLPLKSAGPHP*AEELLVSDVVLLRL Trigger: CAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGGAGGACAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659755.1 |
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| CDS TCA 90 bp | GAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTTGGTTTCTaGCGTTGTCCTCCTGAGGCTGCTCAGTGTCACAAGGTGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: EVGGSPSLGRGAFGF*RCPPEAAQCHKVWL Trigger: AAGCCACACCTTGTGACACTGAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000653828.1 ENST00000659755.1 |
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| CDS GCA 90 bp | CCACAGGAAGCAGCTGGGTTATTTGCAGACAGCTCCCACCTGGGCTaGATCCATCACCCACGCACTATCTTATCCTCAGAGACGCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: PQEAAGLFADSSHLG*IHHPRTILSSETQA Trigger: GGCCTGCGTCTCTGAGGATAAGATAGTGCGTGGGTGATGGATGCAGCCCAGGTGGGAGCTGTCTGCAAATAACCCAGCTGCTTCCTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | CAGGGCCACAGGAAGCAGCTGGGTTATTTGCAGACAGCTCCCACCTaGGCTGCATCCATCACCCACGCACTATCTTATCCTCAGAGACGC | + |
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Preference number: 5 (lower is better) Translates to: QGHRKQLGYLQTAPT*AASITHALSYPQRR Trigger: GCGTCTCTGAGGATAAGATAGTGCGTGGGTGATGGATGCAGCCCAGGTGGGAGCTGTCTGCAAATAACCCAGCTGCTTCCTGTGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | AACACATCTCCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTCCTGAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NTSPVLPLKSAGPHP*AEELLVSDVVLLRL Trigger: CAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGGAGATGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657719.1 |
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| CDS TCA 90 bp | GAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTTGGTTTCTaGCGTTGTCCTCCTGAGGCTGCTGGAATCACAGAAAGACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: EVGGSPSLGRGAFGF*RCPPEAAGITERPH Trigger: ATGAGGTCTTTCTGTGATTCCAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 90 bp | TTCCAGGGCTTCCATTCTTATCCCGAGTTTCCAGCTTCAGCCAGGTaGCCAGGGATGCTTGCTATGGCCGGATCCAAAGGCCAAGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: FQGFHSYPEFPASAR*PGMLAMAGSKGQGK Trigger: CTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCGGGATAAGAATGGAAGCCCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CCA 90 bp | GATATGCTGGAATGTGGAGACAGAGACAGTCCTGGTGTGCTGGTGTaGGGGAGCTTAAGGGACATCAGACCAGCTGCTGAACCACACCCT | + |
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Preference number: 5 (lower is better) Translates to: DMLECGDRDSPGVLV*GSLRDIRPAAEPHP Trigger: AGGGTGTGGTTCAGCAGCTGGTCTGATGTCCCTTAAGCTCCCCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 90 bp | TCCATTCTTATCCCGAGTTTCCAGCTTCAGCCAGGTGCCCAGGGATaGTTGCTATGGCCGGATCCAAAGGCCAAGGCAAGAGGAAACAAC | + |
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Preference number: 5 (lower is better) Translates to: SILIPSFQLQPGAQG*LLWPDPKAKARGNN Trigger: GTTGTTTCCTCTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCGGGATAAGAATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS TCA 90 bp | CCCATCCCTGGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTCCTaGGGCTGCTGGAATCACAGAAAGACCTCATTCCCCTTTAATGTC | + |
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Preference number: 5 (lower is better) Translates to: PIPGQRSFWFLTLSS*GCWNHRKTSFPFNV Trigger: GACATTAAAGGGGAATGAGGTCTTTCTGTGATTCCAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | CAGTGTCTGATTGTGTCAAAGCTGAGACCCAGATATGCTGGAATGTaGAGACAGAGACAGTCCTGGTGTGCTGGTGTGGGGGAGCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: QCLIVSKLRPRYAGM*RQRQSWCAGVGELK Trigger: CTTAAGCTCCCCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAATCAGACACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | TCAGCAACAGTGTCTGATTGTGTCAAAGCTGAGACCCAGATATGCTaGAATGTGGAGACAGAGACAGTCCTGGTGTGCTGGTGTGGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SATVSDCVKAETQIC*NVETETVLVCWCGG Trigger: TCCCCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAATCAGACACTGTTGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 90 bp | ACTTCAGCAACAGTGTCTGATTGTGTCAAAGCTGAGACCCAGATATaGTGGAATGTGGAGACAGAGACAGTCCTGGTGTGCTGGTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: TSATVSDCVKAETQI*WNVETETVLVCWCG Trigger: CCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAATCAGACACTGTTGCTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | TCAGACCAGCTGCTGAACCACACCCTTCATTTGCCAAAAGCTCCATaGGGAGAAACGGGGATCCTGTCGAAAGCTTGCACATATTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: SDQLLNHTLHLPKAP*GETGILSKACTYSD Trigger: GTCAGAATATGTGCAAGCTTTCGACAGGATCCCCGTTTCTCCCCATGGAGCTTTTGGCAAATGAAGGGTGTGGTTCAGCAGCTGGTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 90 bp | AAGACCTCATTCCCCTTTAATGTCAGCTTTCCCATCCCCTGCGTGTaGTCTCAAGACCTTGGAGCTCTTTCTTATAACAGGTGGGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: KTSFPFNVSFPIPCV*SQDLGALSYNRWVG Trigger: CCCCACCCACCTGTTATAAGAAAGAGCTCCAAGGTCTTGAGACCACACGCAGGGGATGGGAAAGCTGACATTAAAGGGGAATGAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS TCA 90 bp | CAAGGGTGCCCATGGTTTGCAAGAGAGGAAAGAACAGAGAGAGCCTaGACATTCCCAGAATTGCATTGCTCACTAGCCAAGCTGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: QGCPWFAREERTERA*TFPELHCSLAKLWL Trigger: AAGCCACAGCTTGGCTAGTGAGCAATGCAATTCTGGGAATGTTCAGGCTCTCTCTGTTCTTTCCTCTCTTGCAAACCATGGGCACCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654928.1 ENST00000657860.1 |
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| CDS TCA 90 bp | TCCATGGGGAGAAACGGGGATCCTGTCGAAAGCTTGCACATATTCTaGCACATGCAGATATGTCTTATGGGCTTAGCAGGCCTGGACAGA | + |
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Preference number: 5 (lower is better) Translates to: SMGRNGDPVESLHIF*HMQICLMGLAGLDR Trigger: TCTGTCCAGGCCTGCTAAGCCCATAAGACATATCTGCATGTGTCAGAATATGTGCAAGCTTTCGACAGGATCCCCGTTTCTCCCCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 90 bp | AGGTGTAACATAGTGACCCCAAGGGACCCAAGGGTGCCCATGGTTTaGAAGAGAGGAAAGAACAGAGAGAGCCTGAACATTCCCAGAATT | + |
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Preference number: 5 (lower is better) Translates to: RCNIVTPRDPRVPMV*KRGKNRESLNIPRI Trigger: AATTCTGGGAATGTTCAGGCTCTCTCTGTTCTTTCCTCTCTTGCAAACCATGGGCACCCTTGGGTCCCTTGGGGTCACTATGTTACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000515864.2 ENST00000654928.1 ENST00000657860.1 ENST00000659755.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000670177.1 |
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| CDS GCA 90 bp | CACAGAAAGACCTCATTCCCCTTTAATGTCAGCTTTCCCATCCCCTaGGTGTGGTCTCAAGACCTTGGAGCTCTTTCTTATAACAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: HRKTSFPFNVSFPIP*VWSQDLGALSYNRW Trigger: CCACCTGTTATAAGAAAGAGCTCCAAGGTCTTGAGACCACACGCAGGGGATGGGAAAGCTGACATTAAAGGGGAATGAGGTCTTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS TCA 90 bp | AAGACACAGTTTCATCCATTAGGAGCTTATTTACTCAGCATTTACTaGAGGCTCACTCTGTGCATACTCTCTGCTAGGCCCTCTGGGGAT | + |
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Preference number: 5 (lower is better) Translates to: KTQFHPLGAYLLSIY*RLTLCILSARPSGD Trigger: ATCCCCAGAGGGCCTAGCAGAGAGTATGCACAGAGTGAGCCTTCAGTAAATGCTGAGTAAATAAGCTCCTAATGGATGAAACTGTGTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000656892.1 ENST00000657860.1 ENST00000661671.1 ENST00000662297.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000667903.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS TCA 90 bp | CTCAAACAAACACATCTCCTAAAGACAAATGTTGGTTATGTTCTCTaGAGACACTACAGTTTAAATCCACATTGGGGAACTCCCCCACTA | + |
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Preference number: 5 (lower is better) Translates to: LKQTHLLKTNVGYVL*RHYSLNPHWGTPPL Trigger: TAGTGGGGGAGTTCCCCAATGTGGATTTAAACTGTAGTGTCTTCAGAGAACATAACCAACATTTGTCTTTAGGAGATGTGTTTGTTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS CAA 72 bp | GGGAACTCCCCCACTAGCCAGGCACCTGTTCTGCCCTaGAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GNSPTSQAPVLP*KSAGPHPWAEE Trigger: CTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGGTGCCTGGCTAGTGGGGGAGTTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS CAA 72 bp | AAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSAGPHPWAEEL*VSDVVLLRLGC Trigger: GCAGCCCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657719.1 ENST00000663526.1 |
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| CDS CAA 90 bp | CTGCCCTTGAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTGGGCTGCATCCATCAC | + |
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Preference number: 6 (lower is better) Translates to: LPLKSAGPHPWAEEL*VSDVVLLRLGCIHH Trigger: GTGATGGATGCAGCCCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657719.1 ENST00000663526.1 |
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| CDS GCA 72 bp | GGCGGCATCTCCCAGTCGGGTTTCCTTTTCAGCATCTaGCGGGAGGGCTGCAGGCCGGCTGGGTATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GGISQSGFLFSI*REGCRPAGYFH Trigger: ATGAAAATACCCAGCCGGCCTGCAGCCCTCCCGGCAGATGCTGAAAAGGAAACCCGACTGGGAGATGCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CAA 90 bp | CTGCCCTTGAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTGCTCAGTGTCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPLKSAGPHPWAEEL*VSDVVLLRLLSVTR Trigger: CCTTGTGACACTGAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000653828.1 ENST00000659755.1 |
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| CDS TCA 72 bp | GGGTCCCCATCCCTGGGCAGAGGAGCTTTTGGTTTCTaGCGTTGTCCTCCTGAGGCTGGGCTGCATCCATCA | + |
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Preference number: 6 (lower is better) Translates to: GSPSLGRGAFGF*RCPPEAGLHPS Trigger: TGATGGATGCAGCCCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657719.1 ENST00000663526.1 |
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| CDS CCA 72 bp | CCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVLPLKSAGPHP*AEELLVSDVVL Trigger: GAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000657719.1 ENST00000659755.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS CAA 72 bp | CCGAGTTTCCAGCTTCAGCCAGGTGCCCAGGGATGCTaGCTATGGCCGGATCCAAAGGCCAAGGCAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PSFQLQPGAQGC*LWPDPKAKARG Trigger: TCCTCTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CAA 72 bp | AAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: KSAGPHPWAEEL*VSDVVLLRLSV Trigger: GACACTGAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507183.2 ENST00000654928.1 |
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| CDS CAA 72 bp | AAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTGCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: KSAGPHPWAEEL*VSDVVLLRLLE Trigger: TTCCAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 90 bp | CTGCCCTTGAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTCAGTGTCACAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LPLKSAGPHPWAEEL*VSDVVLLRLSVTRC Trigger: ACACCTTGTGACACTGAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507183.2 ENST00000654928.1 |
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| CDS CAA 90 bp | CTGCCCTTGAAGTCGGCGGGTCCCCATCCCTGGGCAGAGGAGCTTTaGGTTTCTGACGTTGTCCTCCTGAGGCTGCTGGAATCACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LPLKSAGPHPWAEEL*VSDVVLLRLLESQK Trigger: TTTCTGTGATTCCAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 72 bp | CGAGTTTCCAGCTTCAGCCAGGTGCCCAGGGATGCTTaGTATGGCCGGATCCAAAGGCCAAGGCAAGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: RVSSFSQVPRDA*YGRIQRPRQEE Trigger: TTCCTCTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS GCA 72 bp | ATCCCGAGTTTCCAGCTTCAGCCAGGTGCCCAGGGATaGTTGCTATGGCCGGATCCAAAGGCCAAGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IPSFQLQPGAQG*LLWPDPKAKAR Trigger: TCTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CCA 72 bp | TCTGTTCTGCCCTTGAAGTCGGCGGGTCCCCATCCCTaGGCAGAGGAGCTTTTGGTTTCTGACGTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SVLPLKSAGPHP*AEELLVSDVVL Trigger: GAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCCGCCGACTTCAAGGGCAGAACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000654928.1 |
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| CDS TCA 72 bp | CAGAGGCAGGGATTGAGCACGAGGTTGGCGAATGTCTaGCTCCCCACAGGCGAAGAAGGAAGAAGGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: QRQGLSTRLANV*LPTGEEGRRLK Trigger: CTTCAGCCTTCTTCCTTCTTCGCCTGTGGGGAGTCAGACATTCGCCAACCTCGTGCTCAATCCCTGCCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS TCA 72 bp | GGGTCCCCATCCCTGGGCAGAGGAGCTTTTGGTTTCTaGCGTTGTCCTCCTGAGGCTGCTGGAATCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: GSPSLGRGAFGF*RCPPEAAGITE Trigger: TTCTGTGATTCCAGCAGCCTCAGGAGGACAACGTCAGAAACCAAAAGCTCCTCTGCCCAGGGATGGGGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 72 bp | TTCCAGCTTCAGCCAGGTGCCCAGGGATGCTTGCTATaGCCGGATCCAAAGGCCAAGGCAAGAGGAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: FQLQPGAQGCLL*PDPKAKARGNN Trigger: GTTGTTTCCTCTTGCCTTGGCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CAA 72 bp | TCAGCTTTCCCATCCCCTGCGTGTGGTCTCAAGACCTaGGAGCTCTTTCTTATAACAGGTGGGTGGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: SAFPSPACGLKT*ELFLITGGWGR Trigger: CCGCCCCCACCCACCTGTTATAAGAAAGAGCTCCAAGGTCTTGAGACCACACGCAGGGGATGGGAAAGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 90 bp | AACATTCCCAGAATTGCATTGCTCACTAGCCAAGCTGTGGCTTCCTaGACACATGTAGCTGGCATGGGCTCCGCCCACAAGCAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: NIPRIALLTSQAVAS*THVAGMGSAHKQAW Trigger: CCAGGCCTGCTTGTGGGCGGAGCCCATGCCAGCTACATGTGTCAAGGAAGCCACAGCTTGGCTAGTGAGCAATGCAATTCTGGGAATGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654928.1 |
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| CDS GCA 72 bp | TTCCATTCTTATCCCGAGTTTCCAGCTTCAGCCAGGTaGCCAGGGATGCTTGCTATGGCCGGATCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FHSYPEFPASAR*PGMLAMAGSKG Trigger: GCCTTTGGATCCGGCCATAGCAAGCATCCCTGGGCACCTGGCTGAAGCTGGAAACTCGGGATAAGAATGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 18 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000657719.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CCA 72 bp | CCCAGATATGCTGGAATGTGGAGACAGAGACAGTCCTaGTGTGCTGGTGTGGGGGAGCTTAAGGGACATCAG | + |
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Preference number: 6 (lower is better) Translates to: PRYAGMWRQRQS*CAGVGELKGHQ Trigger: CTGATGTCCCTTAAGCTCCCCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 72 bp | AGGAAGCAGCTGGGTTATTTGCAGACAGCTCCCACCTaGGCTGCATCCATCACCCACGCACTATCTTATCCT | + |
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Preference number: 6 (lower is better) Translates to: RKQLGYLQTAPT*AASITHALSYP Trigger: AGGATAAGATAGTGCGTGGGTGATGGATGCAGCCCAGGTGGGAGCTGTCTGCAAATAACCCAGCTGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 72 bp | AGAATTGCATTGCTCACTAGCCAAGCTGTGGCTTCCTaGACACATGTAGCTGGCATGGGCTCCGCCCACAAG | + |
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Preference number: 6 (lower is better) Translates to: RIALLTSQAVAS*THVAGMGSAHK Trigger: CTTGTGGGCGGAGCCCATGCCAGCTACATGTGTCAAGGAAGCCACAGCTTGGCTAGTGAGCAATGCAATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000654928.1 |
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| CDS CAA 90 bp | CCTCCTGAGGCTGCTCAGTGTCACAAGGTGTGGCTTGAGCAGCTCTaGCCCAGACAGATAAAAAGCAGGTGTAACATAGTGACCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PPEAAQCHKVWLEQL*PRQIKSRCNIVTPR Trigger: CCTTGGGGTCACTATGTTACACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGCAGCCTCAGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659755.1 |
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| CDS CCA 72 bp | ACCCGACCTGCCTTTTCACCTCAGTGTCACAAGGTGTaGCTTGAGCAGCTCTTGCCCAGACAGATAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TRPAFSPQCHKV*LEQLLPRQIKS Trigger: GCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGTGAAAAGGCAGGTCGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000653105.1 ENST00000662297.1 ENST00000664938.1 ENST00000666149.1 ENST00000667903.1 ENST00000668573.1 |
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| CDS CCA 72 bp | ATTGTGTCAAAGCTGAGACCCAGATATGCTGGAATGTaGAGACAGAGACAGTCCTGGTGTGCTGGTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IVSKLRPRYAGM*RQRQSWCAGVG Trigger: CCCCACACCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 90 bp | TGTCCTCCTGAGGCTCAGTGTCACAAGGTGTGGCTTGAGCAGCTCTaGCCCAGACAGATAAAAAGCAGGTGTAACATAGTGACCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: CPPEAQCHKVWLEQL*PRQIKSRCNIVTPR Trigger: CCTTGGGGTCACTATGTTACACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGCCTCAGGAGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000654928.1 |
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| CDS CAA 90 bp | ATGTGCTGTCCTCCTCAGTGTCACAAGGTGTGGCTTGAGCAGCTCTaGCCCAGACAGATAAAAAGCAGGTGTAACATAGTGACCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: MCCPPQCHKVWLEQL*PRQIKSRCNIVTPR Trigger: CCTTGGGGTCACTATGTTACACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGGACAGCACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657860.1 |
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| CDS TCA 72 bp | ACCTGCCTTTTCACCTCAGTGTCACAAGGTGTGGCTTaGGCAGCTCTTGCCCAGACAGATAAAAAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TCLFTSVSQGVA*AALAQTDKKQV Trigger: CACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGTGAAAAGGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000653105.1 ENST00000662297.1 ENST00000664938.1 ENST00000666149.1 ENST00000667903.1 ENST00000668573.1 |
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| CDS TCA 72 bp | AATGTGCTGTCCTCCTCAGTGTCACAAGGTGTGGCTTaGGCAGCTCTTGCCCAGACAGATAAAAAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: NVLSSSVSQGVA*AALAQTDKKQV Trigger: CACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGGACAGCACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657860.1 |
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| CDS GCA 72 bp | ATAGTGACCCCAAGGGACCCAAGGGTGCCCATGGTTTaGAAGAGAGGAAAGAACAGAGAGAGCCTGAACATT | + |
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Preference number: 6 (lower is better) Translates to: IVTPRDPRVPMV*KRGKNRESLNI Trigger: AATGTTCAGGCTCTCTCTGTTCTTTCCTCTCTTGCAAACCATGGGCACCCTTGGGTCCCTTGGGGTCACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000515864.2 ENST00000654928.1 ENST00000657860.1 ENST00000659755.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000668530.1 ENST00000670177.1 |
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| CDS CCA 72 bp | AGTGCAATGTGCTGTCCTCCTCAGTGTCACAAGGTGTaGCTTGAGCAGCTCTTGCCCAGACAGATAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SAMCCPPQCHKV*LEQLLPRQIKS Trigger: GCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGGACAGCACATTGCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657860.1 |
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| CDS CCA 72 bp | GTGTCTGATTGTGTCAAAGCTGAGACCCAGATATGCTaGAATGTGGAGACAGAGACAGTCCTGGTGTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSDCVKAETQIC*NVETETVLVCW Trigger: CCAGCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAATCAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS GCA 72 bp | ACAGTGTCTGATTGTGTCAAAGCTGAGACCCAGATATaGTGGAATGTGGAGACAGAGACAGTCCTGGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TVSDCVKAETQI*WNVETETVLVC Trigger: GCACACCAGGACTGTCTCTGTCTCCACATTCCAGCATATCTGGGTCTCAGCTTTGACACAATCAGACACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 72 bp | GCAGGGAAGTTGAAGGTAACACAATTTGTGGCAGAGTaGGCCAAGAGACCCCAAATCTCCTCCCAGCTTACA | + |
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Preference number: 6 (lower is better) Translates to: AGKLKVTQFVAE*AKRPQISSQLT Trigger: TGTAAGCTGGGAGGAGATTTGGGGTCTCTTGGCCAACTCTGCCACAAATTGTGTTACCTTCAACTTCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 17 transcripts: ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000656892.1 ENST00000657860.1 ENST00000661671.1 ENST00000662297.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000667903.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS CAA 90 bp | ACAAACACATCTCCTCAGTGTCACAAGGTGTGGCTTGAGCAGCTCTaGCCCAGACAGATAAAAAGCAGGTGTAACATAGTGACCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: TNTSPQCHKVWLEQL*PRQIKSRCNIVTPR Trigger: CCTTGGGGTCACTATGTTACACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGATGTGTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000668530.1 ENST00000670177.1 |
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| CDS TCA 72 bp | AACAAACACATCTCCTCAGTGTCACAAGGTGTGGCTTaGGCAGCTCTTGCCCAGACAGATAAAAAGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: NKHISSVSQGVA*AALAQTDKKQV Trigger: CACCTGCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGATGTGTTTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000668530.1 ENST00000670177.1 |
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| CDS GCA 72 bp | ACCTCATTCCCCTTTAATGTCAGCTTTCCCATCCCCTaGGTGTGGTCTCAAGACCTTGGAGCTCTTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: TSFPFNVSFPIP*VWSQDLGALSY Trigger: ATAAGAAAGAGCTCCAAGGTCTTGAGACCACACGCAGGGGATGGGAAAGCTGACATTAAAGGGGAATGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 72 bp | TTCCCCTTTAATGTCAGCTTTCCCATCCCCTGCGTGTaGTCTCAAGACCTTGGAGCTCTTTCTTATAACAGG | + |
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Preference number: 6 (lower is better) Translates to: FPFNVSFPIPCV*SQDLGALSYNR Trigger: CCTGTTATAAGAAAGAGCTCCAAGGTCTTGAGACCACACGCAGGGGATGGGAAAGCTGACATTAAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CAA 90 bp | AAATGTTGGTTATGTTCTCTGAAGACACTACAGTTTAAATCCACATaGGGGAACTCCCCCACTAGCCAGGCACCTGTTCTGCCCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KCWLCSLKTLQFKST*GNSPTSQAPVLPLK Trigger: CTTCAAGGGCAGAACAGGTGCCTGGCTAGTGGGGGAGTTCCCCAATGTGGATTTAAACTGTAGTGTCTTCAGAGAACATAACCAACATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS CAA 90 bp | ATTTTACAGGCAGGGAAGTTGAAGGTAACACAATTTGTGGCAGAGTaGGCCAAGAGACCCCAAATCTCCTCCCAGCTTACAGTCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ILQAGKLKVTQFVAE*AKRPQISSQLTVLF Trigger: AAACAGGACTGTAAGCTGGGAGGAGATTTGGGGTCTCTTGGCCAACTCTGCCACAAATTGTGTTACCTTCAACTTCCCTGCCTGTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 17 transcripts: ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000656892.1 ENST00000657860.1 ENST00000661671.1 ENST00000662297.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000667903.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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| CDS TCA 72 bp | AGAAACGGGGATCCTGTCGAAAGCTTGCACATATTCTaGCACATGCAGATATGTCTTATGGGCTTAGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RNGDPVESLHIF*HMQICLMGLAG Trigger: GCCTGCTAAGCCCATAAGACATATCTGCATGTGTCAGAATATGTGCAAGCTTTCGACAGGATCCCCGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666149.1 |
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| CDS CCA 72 bp | ACTCAAACAAACACATCTCCTCAGTGTCACAAGGTGTaGCTTGAGCAGCTCTTGCCCAGACAGATAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: TQTNTSPQCHKV*LEQLLPRQIKS Trigger: GCTTTTTATCTGTCTGGGCAAGAGCTGCTCAAGCCACACCTTGTGACACTGAGGAGATGTGTTTGTTTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000668530.1 ENST00000670177.1 |
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| CDS CAA 72 bp | TTATGTTCTCTGAAGACACTACAGTTTAAATCCACATaGGGGAACTCCCCCACTAGCCAGGCACCTGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LCSLKTLQFKST*GNSPTSQAPVL Trigger: CAGAACAGGTGCCTGGCTAGTGGGGGAGTTCCCCAATGTGGATTTAAACTGTAGTGTCTTCAGAGAACATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS TCA 72 bp | ACACATCTCCTAAAGACAAATGTTGGTTATGTTCTCTaGAGACACTACAGTTTAAATCCACATTGGGGAACT | + |
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Preference number: 6 (lower is better) Translates to: THLLKTNVGYVL*RHYSLNPHWGT Trigger: AGTTCCCCAATGTGGATTTAAACTGTAGTGTCTTCAGAGAACATAACCAACATTTGTCTTTAGGAGATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000507183.2 ENST00000653828.1 ENST00000663526.1 ENST00000666149.1 |
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| CDS GCA 72 bp | GACCCAAACATACAAAAAGGTAACTTAACCAATTTGTaGAGTAATAGCTCTTGTCTCTGGGTGTTTTCGTTA | + |
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Preference number: 6 (lower is better) Translates to: DPNIQKGNLTNL*SNSSCLWVFSL Trigger: TAACGAAAACACCCAGAGACAAGAGCTATTACTGCACAAATTGGTTAAGTTACCTTTTTGTATGTTTGGGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 21 transcripts: ENST00000506479.6 ENST00000507183.2 ENST00000515864.2 ENST00000653105.1 ENST00000653828.1 ENST00000654928.1 ENST00000656892.1 ENST00000657860.1 ENST00000659755.1 ENST00000661671.1 ENST00000662297.1 ENST00000663526.1 ENST00000663695.1 ENST00000664938.1 ENST00000665575.1 ENST00000666149.1 ENST00000667903.1 ENST00000668530.1 ENST00000668573.1 ENST00000670177.1 ENST00000671675.1 |
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