Pregenerated sensors for LINC01088 (Homo sapiens)
Ensembl gene IDs: ENSG00000249307Ensembl transcript IDs: ENST00000437737.3, ENST00000505149.1, ENST00000507476.5, ENST00000507761.1, ENST00000509088.6, ENST00000510667.5, ENST00000511241.5, ENST00000511895.1, ENST00000512130.5, ENST00000513153.5, ENST00000515597.1, ENST00000651041.1, ENST00000653314.1, ENST00000658852.1, ENST00000669293.1, ENST00000670100.1, ENST00000671503.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGGTCTGGCCACTGTGCACAGTCAGACACACCAACTGCTGCAGTaGGGTGGGAACTCCAGGTGCTGGCACTGGGGCTGGCTCTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: WGLATVHSQTHQLLQ*GGNSRCWHWGWLSA Trigger: TGCAGAGAGCCAGCCCCAGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAGTTGGTGTGTCTGACTGTGCACAGTGGCCAGACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS TCA 90 bp | TTCCCAGACTGGGCAGCCAGGCAGAGGGGCTCCTCGCATCCCAGATaGTGGGCGGCCAGGCAGAGATGTTCCTCACTTCCTAGACGGGAT | + |
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Preference number: 5 (lower is better) Translates to: FPDWAARQRGSSHPR*WAARQRCSSLPRRD Trigger: ATCCCGTCTAGGAAGTGAGGAACATCTCTGCCTGGCCGCCCATCATCTGGGATGCGAGGAGCCCCTCTGCCTGGCTGCCCAGTCTGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CCA 90 bp | TCTGGCCACTGTGCACAGTCAGACACACCAACTGCTGCAGTGGGGTaGGAACTCCAGGTGCTGGCACTGGGGCTGGCTCTCTGCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: SGHCAQSDTPTAAVG*ELQVLALGLALCKA Trigger: AGCCTTGCAGAGAGCCAGCCCCAGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAGTTGGTGTGTCTGACTGTGCACAGTGGCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS GCA 90 bp | CATACCACTGGTCTGGGTCTCATGCTTGCCAAGGGCGTGTATCCATaGCTGCCAAGGGCGAGTCAGGCATGGAACAGTGAGGGGTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: HTTGLGLMLAKGVYP*LPRASQAWNSEGCV Trigger: CACACACCCCTCACTGTTCCATGCCTGACTCGCCCTTGGCAGGCATGGATACACGCCCTTGGCAAGCATGAGACCCAGACCAGTGGTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS TCA 90 bp | GAGACCTGCAGGGGGCAGCTCCTTTCTGCAGCCAGGGTGTCCAGATaGGTGTTCAGCTCCTTTTCTCTGCAGACAGGTTGTCCCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: ETCRGQLLSAARVSR*VFSSFSLQTGCPTV Trigger: GACAGTGGGACAACCTGTCTGCAGAGAAAAGGAGCTGAACACTCATCTGGACACCCTGGCTGCAGAAAGGAGCTGCCCCCTGCAGGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS TCA 90 bp | GATCTTCGGGATGTCCATTTCCTGGCTGGAAACCTCTGTGGCCGATaGCACCTTTGGCAGTTTTGCTTGGGCCCACTGGGCTCATTTCGC | + |
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Preference number: 5 (lower is better) Translates to: DLRDVHFLAGNLCGR*HLWQFCLGPLGSFR Trigger: GCGAAATGAGCCCAGTGGGCCCAAGCAAAACTGCCAAAGGTGTCATCGGCCACAGAGGTTTCCAGCCAGGAAATGGACATCCCGAAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS GCA 90 bp | TTCAGCAGGTCTACTCCTATTCCTTCAAGGGGAAGCCGGCAGCTCTaGCAGCACTTTACCACAGGTCTTCACCAGGCACAGAGGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: FSRSTPIPSRGSRQL*QHFTTGLHQAQRRT Trigger: AGTCCTCCTCTGTGCCTGGTGAAGACCTGTGGTAAAGTGCTGGCAGAGCTGCCGGCTTCCCCTTGAAGGAATAGGAGTAGACCTGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510667.5 ENST00000651041.1 ENST00000670100.1 |
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| CDS GCA 90 bp | CCACTTGTATTCGCCTGTAGCTCTGTGCTTTCGGCTCTTCTCATATaGAAACGAAGACCCCAGGCGCCGCCAAAACACAGCGTGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PLVFACSSVLSALLI*KRRPQAPPKHSVRD Trigger: GTCTCTCACGCTGTGTTTTGGCGGCGCCTGGGGTCTTCGTTTGCATATGAGAAGAGCCGAAAGCACAGAGCTACAGGCGAATACAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 90 bp | GTCATCCTGATGTCTGCTGCTCTCAGCAGAGAGGAGGCCCTGGAATaGGTAGCTCCTTTCTGCAGCTGGTCATCCAGATATCTGCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: VILMSAALSREEALE*VAPFCSWSSRYLLS Trigger: ACTAAGCAGATATCTGGATGACCAGCTGCAGAAAGGAGCTACTCATTCCAGGGCCTCCTCTCTGCTGAGAGCAGCAGACATCAGGATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511241.5 ENST00000651041.1 |
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| CDS CCA 90 bp | ATTCAGTTCAGCATGGCTGGCGAGGTCTCAGGAAACTTACAATCATaGAGGAAGGGGAAGCGAACACGTCCTTCTTCATATGGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: IQFSMAGEVSGNLQS*RKGKRTRPSSYGGS Trigger: GCTGCCGCCATATGAAGAAGGACGTGTTCGCTTCCCCTTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507476.5 ENST00000509088.6 |
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| CDS CCA 90 bp | ACCTTGAGCAGGAAATGTCCACTCTATTCCCTAGGAAACAAAGCATaGAAGGATTACTTCAGCCTCTCCCCCAGCTACCTCCTTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: TLSRKCPLYSLGNKA*KDYFSLSPSYLLSW Trigger: CCATGAAAGGAGGTAGCTGGGGGAGAGGCTGAAGTAATCCTTCCATGCTTTGTTTCCTAGGGAATAGAGTGGACATTTCCTGCTCAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS TCA 90 bp | TGCGGCAGTACAGTCCTGCCTTGGTTCTTCTGTTTTCCTGCAAAGTaGGCCATTCAGGCATTGCATCTTCTGAAATTTCCTCGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CGSTVLPWFFCFPAK*AIQALHLLKFPRLF Trigger: AAAGAGGCGAGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGAACCAAGGCAGGACTGTACTGCCGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS TCA 90 bp | CGGCAGCTTAGCTGTGAAACGCTGAGCTGTTTCTTAATTTTTACGTaGTTTAGCTTCCTCTCTGCCAGCACTTTACCACAGGTCTTCACC | + |
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Preference number: 5 (lower is better) Translates to: RQLSCETLSCFLIFT*FSFLSASTLPQVFT Trigger: GGTGAAGACCTGTGGTAAAGTGCTGGCAGAGAGGAAGCTAAATCACGTAAAAATTAAGAAACAGCTCAGCGTTTCACAGCTAAGCTGCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000509088.6 ENST00000658852.1 ENST00000671503.1 |
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| CDS CCA 90 bp | AGATGTTCTGTGGTCTTAAACATGTTGTATTCAGTTCAGCATGGCTaGCGAGGTCTCAGGAAACTTACAATCATGGAGGAAGGGGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: RCSVVLNMLYSVQHG*RGLRKLTIMEEGEA Trigger: CGCTTCCCCTTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGAATACAACATGTTTAAGACCACAGAACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507476.5 ENST00000509088.6 |
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| CDS CCA 90 bp | GATTTAGTCCTTGCTCTCAAGATGTTTATAACAGTTCAGCATGGCTaGCGAGGTCTCAGGAAACTTACAATCATGGAGGAAGGGGAAGCG | + |
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Preference number: 5 (lower is better) Translates to: DLVLALKMFITVQHG*RGLRKLTIMEEGEA Trigger: CGCTTCCCCTTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGTTATAAACATCTTGAGAGCAAGGACTAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515597.1 |
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| CDS CCA 90 bp | ATGCTGAACCAAACTTGCATCCCAGGGATGAAGCCAACTCTATCATaGTGGCTAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: MLNQTCIPGMKPTLS*WLSFLMCCWIWFAS Trigger: ACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCCTGGGATGCAAGTTTGGTTCAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 90 bp | TCTTCTGTTTTCCTGCAAAGTGAGCCATTCAGGCATTGCATCTTCTaGAATTTCCTCGCCTCTTTCAGGGAAGCATATTGGGACAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSVFLQSEPFRHCIF*NFLASFREAYWDRA Trigger: AGCTCTGTCCCAATATGCTTCCCTGAAAGAGGCGAGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000437737.3 ENST00000511895.1 ENST00000653314.1 |
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| CDS CCA 90 bp | CTGAACCAAACTTGCATCCCAGGGATGAAGCCAACTCTATCATGGTaGCTAAGCTTTTTGATGTGCTGCTGGATTTGGTTTGCCAGTATT | + |
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Preference number: 5 (lower is better) Translates to: LNQTCIPGMKPTLSW*LSFLMCCWIWFASI Trigger: AATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCCTGGGATGCAAGTTTGGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CCA 90 bp | CTTACAATCATGGAGGAAGGGGAAGCGAACACGTCCTTCTTCATATaGCGGCAGCAAGAAGCAGTTCTAATTGATGAATTTTGGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: LTIMEEGEANTSFFI*RQQEAVLIDEFWRS Trigger: ACTTCTCCAAAATTCATCAATTAGAACTGCTTCTTGCTGCCGCCATATGAAGAAGGACGTGTTCGCTTCCCCTTCCTCCATGATTGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000509088.6 ENST00000651041.1 |
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| CDS CCA 90 bp | GTAAGATTTAGTCCTTGCTCTCAAGATGTTTATAACAGTTCAGCATaGCTGGCGAGGTCTCAGGAAACTTACAATCATGGAGGAAGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VRFSPCSQDVYNSSA*LARSQETYNHGGRG Trigger: TCCCCTTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGTTATAAACATCTTGAGAGCAAGGACTAAATCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515597.1 |
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| CDS TCA 90 bp | TGTAGGTTTCCTGTTCACTCTTGGTTCTTCTGTTTTCCTGCAAAGTaGGCCATTCAGGCATTGCATCTTCTGAAATTTCCTCGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CRFPVHSWFFCFPAK*AIQALHLLKFPRLF Trigger: AAAGAGGCGAGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGAACCAAGAGTGAACAGGAAACCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511895.1 ENST00000653314.1 |
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| CDS TCA 90 bp | GCTGTAAGGACGAAAGTAATCTTCCGGGAATTATGCATACAGGCTTaGCATCATTTTTATTGGATGGCTGATGAACTGGAAAACTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AVRTKVIFRELCIQA*HHFYWMADELENSR Trigger: CCTGGAGTTTTCCAGTTCATCAGCCATCCAATAAAAATGATGTCAAGCCTGTATGCATAATTCCCGGAAGATTACTTTCGTCCTTACAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000505149.1 ENST00000507476.5 ENST00000509088.6 ENST00000511241.5 ENST00000512130.5 ENST00000513153.5 ENST00000658852.1 |
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| CDS CCA 90 bp | CAGTGTCCATCTCTATACCAGATTTTACTAGGGACACTGAAGAGTTaGACGGGGCATTTGGATAAATGTAACCAAAGTGAAACCATCATC | + |
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Preference number: 5 (lower is better) Translates to: QCPSLYQILLGTLKS*TGHLDKCNQSETII Trigger: GATGATGGTTTCACTTTGGTTACATTTATCCAAATGCCCCGTCCAACTCTTCAGTGTCCCTAGTAAAATCTGGTATAGAGATGGACACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000507761.1 ENST00000511895.1 ENST00000653314.1 ENST00000671503.1 |
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| CDS CCA 90 bp | ATTCTCATTGTTCAGCTCCCATTTATAAGTGAGAACATGCAGTGTTaGGTTTTCTGTTCCTGTGTTAGTTTGCTGAGGATAATGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: ILIVQLPFISENMQC*VFCSCVSLLRIMAS Trigger: GGAAGCCATTATCCTCAGCAAACTAACACAGGAACAGAAAACCCAACACTGCATGTTCTCACTTATAAATGGGAGCTGAACAATGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 90 bp | GCCTCTAGGTCTTTGAGGAATTGCTACACTGTCTTCCACAAAGGTTaGACTAATTTACACTCCCATCAACAGTGTAAAAGTGTCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: ASRSLRNCYTVFHKG*TNLHSHQQCKSVSF Trigger: AAAAGAGACACTTTTACACTGTTGATGGGAGTGTAAATTAGTTCAACCTTTGTGGAAGACAGTGTAGCAATTCCTCAAAGACCTAGAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CCA 90 bp | TCTAGTATTGCAGTCTGGATCTCTGCAGTGGTGGAATTTGCCCACTaGGTAATAGATGATAATTATGTATTGAGGACATTTATTACTACA | + |
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Preference number: 5 (lower is better) Translates to: SSIAVWISAVVEFAH*VIDDNYVLRTFITT Trigger: TGTAGTAATAAATGTCCTCAATACATAATTATCATCTATTACCCAGTGGGCAAATTCCACCACTGCAGAGATCCAGACTGCAATACTAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS CCA 72 bp | GGCCAGGTAGAGACGCTCCTCACCTCCCAGATGGGGTaGCGGCCGGGTAGAGACGCTCCTCACCTCCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GQVETLLTSQMG*RPGRDAPHLPD Trigger: GTCTGGGAGGTGAGGAGCGTCTCTACCCGGCCGCCACCCCATCTGGGAGGTGAGGAGCGTCTCTACCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CCA 72 bp | CCGGGCAGAGGCGCTCCCCACATCCCAGATGATGGGTaGCCAGGCAGAGACGTTCCTCACTTCCTAGACGGG | + |
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Preference number: 6 (lower is better) Translates to: PGRGAPHIPDDG*PGRDVPHFLDG Trigger: CCCGTCTAGGAAGTGAGGAACGTCTCTGCCTGGCCACCCATCATCTGGGATGTGGGGAGCGCCTCTGCCCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CCA 72 bp | CTGCTGCAGTGGGGTGGGAACTCCAGGTGCTGGCACTaGGGCTGGCTCTCTGCAAGGCTACAGCCAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: LLQWGGNSRCWH*GWLSARLQPDQ Trigger: CTGGTCTGGCTGTAGCCTTGCAGAGAGCCAGCCCCAGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | CAGAGGCGCTCCTCACTTCCCAGACTGGGTGGTGGCTaGGTAGAGATGCTCCTCATCTCCCAGACAGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: QRRSSLPRLGGG*VEMLLISQTGR Trigger: CCGCCCTGTCTGGGAGATGAGGAGCATCTCTACCCAGCCACCACCCAGTCTGGGAAGTGAGGAGCGCCTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CCA 72 bp | GCCACTGTGCACAGTCAGACACACCAACTGCTGCAGTaGGGTGGGAACTCCAGGTGCTGGCACTGGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ATVHSQTHQLLQ*GGNSRCWHWGW Trigger: CCAGCCCCAGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAGTTGGTGTGTCTGACTGTGCACAGTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS GCA 72 bp | GGGGTCTGGCCACTGTGCACAGTCAGACACACCAACTaGTGCAGTGGGGTGGGAACTCCAGGTGCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: GVWPLCTVRHTN*CSGVGTPGAGT Trigger: AGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAGTTGGTGTGTCTGACTGTGCACAGTGGCCAGACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | TGTGCACAGTCAGACACACCAACTGCTGCAGTGGGGTaGGAACTCCAGGTGCTGGCACTGGGGCTGGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: CAQSDTPTAAVG*ELQVLALGLAL Trigger: GAGAGCCAGCCCCAGTGCCAGCACCTGGAGTTCCCACCCCACTGCAGCAGTTGGTGTGTCTGACTGTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS TCA 72 bp | CTGGAGTGGGTAGCTCCTCTCTGCAGCTGGTCATCCTaGTGTCTGCTGCTCTCAGCAGAGAGGAGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LEWVAPLCSWSS*CLLLSAERRPW Trigger: CCAGGGCCTCCTCTCTGCTGAGAGCAGCAGACATCAGGATGACCAGCTGCAGAGAGGAGCTACCCACTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511241.5 ENST00000651041.1 |
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| CDS GCA 72 bp | CAGCTCAGGGGAGACCTGCAGGGGGCAGCTCCTTTCTaGAGCCAGGGTGTCCAGATGAGTGTTCAGCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QLRGDLQGAAPF*SQGVQMSVQLL Trigger: AAGGAGCTGAACACTCATCTGGACACCCTGGCTGCAGAAAGGAGCTGCCCCCTGCAGGTCTCCCCTGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | CCACAGGATCCCAAAGAGGGAGTCACAGCCCTGGCTTaGGGAACTCCTAGGTCTGGGATCCCCAAAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PQDPKEGVTALA*GTPRSGIPKGP Trigger: TGGCCCTTTGGGGATCCCAGACCTAGGAGTTCCCCAAGCCAGGGCTGTGACTCCCTCTTTGGGATCCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | GGCGTGTATCCATGCCTGCCAAGGGCGAGTCAGGCATaGAACAGTGAGGGGTGTGTGAGTGAGTGTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GVYPCLPRASQA*NSEGCVSECGV Trigger: GACCCCACACTCACTCACACACCCCTCACTGTTCCATGCCTGACTCGCCCTTGGCAGGCATGGATACACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | GTTTTGCTTGGGCCCACTGGGCTCATTTCGCCCACTTaGCCAGTAGGCTGCACTCGGCTCATACCACTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VLLGPTGLISPT*PVGCTRLIPLV Trigger: GACCAGTGGTATGAGCCGAGTGCAGCCTACTGGCCAAGTGGGCGAAATGAGCCCAGTGGGCCCAAGCAAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | AGGAACCACAGGATCCCAAAGAGGGAGTCACAGCCCTaGCTTGGGGAACTCCTAGGTCTGGGATCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: RNHRIPKRESQP*LGELLGLGSPK Trigger: CTTTGGGGATCCCAGACCTAGGAGTTCCCCAAGCCAGGGCTGTGACTCCCTCTTTGGGATCCTGTGGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | ACCTCTGTGGCCGATGACACCTTTGGCAGTTTTGCTTaGGCCCACTGGGCTCATTTCGCCCACTTGGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: TSVADDTFGSFA*AHWAHFAHLAS Trigger: ACTGGCCAAGTGGGCGAAATGAGCCCAGTGGGCCCAAGCAAAACTGCCAAAGGTGTCATCGGCCACAGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CAA 90 bp | GGATGTCCATTTCCTGGCTGGAAACCTCTGTGGCCGATGACACCTTaGGCAGTTTTGCTTGGGCCCACTGGGCTCATTTCGCCCACTTGG | + |
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Preference number: 6 (lower is better) Translates to: GCPFPGWKPLWPMTP*AVLLGPTGLISPTW Trigger: CCAAGTGGGCGAAATGAGCCCAGTGGGCCCAAGCAAAACTGCCAAAGGTGTCATCGGCCACAGAGGTTTCCAGCCAGGAAATGGACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS TCA 72 bp | AGGGGGCAGCTCCTTTCTGCAGCCAGGGTGTCCAGATaGGTGTTCAGCTCCTTTTCTCTGCAGACAGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RGQLLSAARVSR*VFSSFSLQTGC Trigger: ACAACCTGTCTGCAGAGAAAAGGAGCTGAACACTCATCTGGACACCCTGGCTGCAGAAAGGAGCTGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS GCA 72 bp | GGAGAATCAGGCAGGGAGGCTGCAGTGAGCCGAGATTaGGGCAGTACAGTCCTGCCTTGGTTCTTCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: GESGREAAVSRD*GSTVLPWFFCF Trigger: AAAACAGAAGAACCAAGGCAGGACTGTACTGCCGCAATCTCGGCTCACTGCAGCCTCCCTGCCTGATTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS GCA 72 bp | TTCGCCTGTAGCTCTGTGCTTTCGGCTCTTCTCATATaGAAACGAAGACCCCAGGCGCCGCCAAAACACAGC | + |
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Preference number: 6 (lower is better) Translates to: FACSSVLSALLI*KRRPQAPPKHS Trigger: GCTGTGTTTTGGCGGCGCCTGGGGTCTTCGTTTGCATATGAGAAGAGCCGAAAGCACAGAGCTACAGGCGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CCA 72 bp | AAAGTATGTGCTGATTGGTCCATGGGTAGCCGTGGGTaGCAGTTCAGCATGGCTGGCGAGGTCTCAGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: KVCADWSMGSRG*QFSMAGEVSGN Trigger: GTTTCCTGAGACCTCGCCAGCCATGCTGAACTGCCACCCACGGCTACCCATGGACCAATCAGCACATACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | CAAGTGAAGGGTGAGCAAGACGAAGAGGAGCGTTATTaGGCAATAGAACAGCTCAGGGGAGACCTGCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: QVKGEQDEEERY*AIEQLRGDLQG Trigger: CCCCTGCAGGTCTCCCCTGAGCTGTTCTATTGCCCAATAACGCTCCTCTTCGTCTTGCTCACCCTTCACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CAA 72 bp | AGGAGAATCAGGCAGGGAGGCTGCAGTGAGCCGAGATaGCGGCAGTACAGTCCTGCCTTGGTTCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RRIRQGGCSEPR*RQYSPALVLLF Trigger: AAACAGAAGAACCAAGGCAGGACTGTACTGCCGCAATCTCGGCTCACTGCAGCCTCCCTGCCTGATTCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CAA 72 bp | CAGCTGGCACTAAGGAATGTGGTGGCACCTGGAATCTaGGAGATGCCAGGAACCACAGGATCCCAAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QLALRNVVAPGI*EMPGTTGSQRG Trigger: CCCTCTTTGGGATCCTGTGGTTCCTGGCATCTCCAAGATTCCAGGTGCCACCACATTCCTTAGTGCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CAA 90 bp | CAGGGAGGCTGCAGTGAGCCGAGATTGCGGCAGTACAGTCCTGCCTaGGTTCTTCTGTTTTCCTGCAAAGTGAGCCATTCAGGCATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGGCSEPRLRQYSPA*VLLFSCKVSHSGIA Trigger: TGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGAACCAAGGCAGGACTGTACTGCCGCAATCTCGGCTCACTGCAGCCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437737.3 |
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| CDS CAA 90 bp | CAGGGTGTCCAGATGAGTGTTCAGCTCCTTTTCTCTGCAGACAGGTaGTCCCACTGTCTCTGCAGCTCTCATCAAAGAGGAGGCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGVQMSVQLLFSADR*SHCLCSSHQRGGPG Trigger: TCCAGGGCCTCCTCTTTGATGAGAGCTGCAGAGACAGTGGGACAACCTGTCTGCAGAGAAAAGGAGCTGAACACTCATCTGGACACCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS GCA 72 bp | CCAGGGTGTCCAGATGAGTGTTCAGCTCCTTTTCTCTaGAGACAGGTTGTCCCACTGTCTCTGCAGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGCPDECSAPFL*RQVVPLSLQLS Trigger: TGAGAGCTGCAGAGACAGTGGGACAACCTGTCTGCAGAGAAAAGGAGCTGAACACTCATCTGGACACCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CAA 72 bp | GCCAGCCAGCACCCCAGTGGACTCTATCAACAGGCATaGAGCAATAGGCACACAGTAAACGGCAGCTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASQHPSGLYQQA*SNRHTVNGSCC Trigger: ACAACAGCTGCCGTTTACTGTGTGCCTATTGCTCAATGCCTGTTGATAGAGTCCACTGGGGTGCTGGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671503.1 |
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| CDS TCA 72 bp | TGCAGCTGGTCATCCAGATATCTGCTTAGTTCTGGCTaGGCGCAGGGCTTTTATGGGCCTCAGAGGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSWSSRYLLSSG*AQGFYGPQRRE Trigger: TTCTCTCCTCTGAGGCCCATAAAAGCCCTGCGCTCAGCCAGAACTAAGCAGATATCTGGATGACCAGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511241.5 ENST00000651041.1 |
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| CDS CAA 72 bp | CTTCTGAAATTTCCTCGCCTCTTTCAGGGAAGCATATaGGGACAGAGCTTGCCAGCTGTCTGCTCCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKFPRLFQGSI*GQSLPAVCSLC Trigger: GCAAAGGGAGCAGACAGCTGGCAAGCTCTGTCCCAATATGCTTCCCTGAAAGAGGCGAGGAAATTTCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437737.3 ENST00000511895.1 ENST00000653314.1 |
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| CDS TCA 72 bp | TTGATGCTTGCCGGCCTTGTGGTAATAAGACAGCTCTaGAGCACAGGCAGCAGTACTAACTCATCCAGTATC | + |
|
Preference number: 6 (lower is better) Translates to: LMLAGLVVIRQL*STGSSTNSSSI Trigger: GATACTGGATGAGTTAGTACTGCTGCCTGTGCTTCAGAGCTGTCTTATTACCACAAGGCCGGCAAGCATCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000505149.1 ENST00000507476.5 ENST00000509088.6 ENST00000510667.5 ENST00000511241.5 ENST00000512130.5 ENST00000513153.5 ENST00000658852.1 |
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| CDS GCA 72 bp | GCTGAGGATAATGGCTTCCAGCTCCATCCATGTCCCTaGAAAGGACGTGATATCATTCCTTTTTATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEDNGFQLHPCP*KGRDIIPFYGC Trigger: GCAGCCATAAAAAGGAATGATATCACGTCCTTTGCAGGGACATGGATGGAGCTGGAAGCCATTATCCTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CCA 72 bp | TCAGGGTTGGGCATAAGCATCATGAAGACTAGGCACTaGTGTGTAGAAAGTCTCAACTTCTCTATGCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLGISIMKTRH*CVESLNFSMPR Trigger: CCGAGGCATAGAGAAGTTGAGACTTTCTACACACCAGTGCCTAGTCTTCATGATGCTTATGCCCAACCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515597.1 ENST00000651041.1 |
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| CDS CCA 72 bp | AGGAAATGTCCACTCTATTCCCTAGGAAACAAAGCATaGAAGGATTACTTCAGCCTCTCCCCCAGCTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKCPLYSLGNKA*KDYFSLSPSYL Trigger: GAGGTAGCTGGGGGAGAGGCTGAAGTAATCCTTCCATGCTTTGTTTCCTAGGGAATAGAGTGGACATTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS CAA 72 bp | TCTTTAAGGGCCAGCTTGACTGTAGTGTGCAAGCTTTaGGGCCTCTTCTCTCATGTGATAGTTCAGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLRASLTVVCKL*GLFSHVIVQQV Trigger: GACCTGCTGAACTATCACATGAGAGAAGAGGCCCAAAAGCTTGCACACTACAGTCAAGCTGGCCCTTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000509088.6 ENST00000510667.5 ENST00000513153.5 ENST00000651041.1 ENST00000658852.1 ENST00000670100.1 ENST00000671503.1 |
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| CDS CAA 90 bp | AGGTCCATCTCTTTAAGGGCCAGCTTGACTGTAGTGTGCAAGCTTTaGGGCCTCTTCTCTCATGTGATAGTTCAGCAGGTCTACTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RSISLRASLTVVCKL*GLFSHVIVQQVYSY Trigger: ATAGGAGTAGACCTGCTGAACTATCACATGAGAGAAGAGGCCCAAAAGCTTGCACACTACAGTCAAGCTGGCCCTTAAAGAGATGGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000509088.6 ENST00000510667.5 ENST00000513153.5 ENST00000651041.1 ENST00000658852.1 ENST00000670100.1 ENST00000671503.1 |
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| CDS CAA 90 bp | ACATCTGGCTCAGCATCTTCTAGGTCCATCTCTTTAAGGGCCAGCTaGACTGTAGTGTGCAAGCTTTTGGGCCTCTTCTCTCATGTGATA | + |
|
Preference number: 6 (lower is better) Translates to: TSGSASSRSISLRAS*TVVCKLLGLFSHVI Trigger: TATCACATGAGAGAAGAGGCCCAAAAGCTTGCACACTACAGTCAAGCTGGCCCTTAAAGAGATGGACCTAGAAGATGCTGAGCCAGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000509088.6 ENST00000510667.5 ENST00000513153.5 ENST00000651041.1 ENST00000658852.1 ENST00000670100.1 ENST00000671503.1 |
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| CDS TCA 72 bp | TCTTCACCAGGCACAGAGGAGGACTATACTGAAGACTaGGGGAAAGTCAAGAAATCTGAGAGAGAGAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPGTEEDYTED*GKVKKSERERS Trigger: GGATCTCTCTCTCTCAGATTTCTTGACTTTCCCTCAGTCTTCAGTATAGTCCTCCTCTGTGCCTGGTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000509088.6 ENST00000510667.5 ENST00000651041.1 ENST00000658852.1 ENST00000670100.1 ENST00000671503.1 |
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| CDS CCA 72 bp | TGTTCGTGTTACTGCTCTTTTAGCCTCACCATTCAGTaGGTCCCGACTTCTTGTCATGTGACCAGGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: CSCYCSFSLTIQ*VPTSCHVTRKN Trigger: ATTCTTCCTGGTCACATGACAAGAAGTCGGGACCCACTGAATGGTGAGGCTAAAAGAGCAGTAACACGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000651041.1 |
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| CDS CCA 72 bp | CAAACTTGCATCCCAGGGATGAAGCCAACTCTATCATaGTGGCTAAGCTTTTTGATGTGCTGCTGGATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: QTCIPGMKPTLS*WLSFLMCCWIW Trigger: CCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCCTGGGATGCAAGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
||
| CDS CCA 72 bp | GGCCCTTTTCTCTTCCTCAGAGAGTTGTGTAGATATTaGCTACCTCTAGTATTGCAGTCTGGATCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPFLFLRELCRY*LPLVLQSGSLQ Trigger: CTGCAGAGATCCAGACTGCAATACTAGAGGTAGCCAATATCTACACAACTCTCTGAGGAAGAGAAAAGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS TCA 72 bp | TTCCTGCAAAGTGAGCCATTCAGGCATTGCATCTTCTaGAATTTCCTCGCCTCTTTCAGGGAAGCATATTGG | + |
|
Preference number: 6 (lower is better) Translates to: FLQSEPFRHCIF*NFLASFREAYW Trigger: CCAATATGCTTCCCTGAAAGAGGCGAGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437737.3 ENST00000511895.1 ENST00000653314.1 |
||
| CDS CCA 72 bp | ATGGAGGAAGGGGAAGCGAACACGTCCTTCTTCATATaGCGGCAGCAAGAAGCAGTTCTAATTGATGAATTT | + |
|
Preference number: 6 (lower is better) Translates to: MEEGEANTSFFI*RQQEAVLIDEF Trigger: AAATTCATCAATTAGAACTGCTTCTTGCTGCCGCCATATGAAGAAGGACGTGTTCGCTTCCCCTTCCTCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509088.6 ENST00000651041.1 |
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| CDS CCA 72 bp | ACTTGCATCCCAGGGATGAAGCCAACTCTATCATGGTaGCTAAGCTTTTTGATGTGCTGCTGGATTTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: TCIPGMKPTLSW*LSFLMCCWIWF Trigger: AAACCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCCTGGGATGCAAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CAA 72 bp | AATGAGGCAGGATTATATAGAGGAAAGGACTCAGGGTaGGGCATAAGCATCATGAAGACTAGGCACTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: NEAGLYRGKDSG*GISIMKTRHWC Trigger: ACACCAGTGCCTAGTCTTCATGATGCTTATGCCCAACCCTGAGTCCTTTCCTCTATATAATCCTGCCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515597.1 ENST00000651041.1 |
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| CDS CAA 72 bp | CATGCTGTTTTGGTTAAAGTAGCCTTGCAATATGGTTaGAAGTTGGGTAGCGTGATGCCTCCAGCTTCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HAVLVKVALQYG*KLGSVMPPASY Trigger: GTACGAAGCTGGAGGCATCACGCTACCCAACTTCAAACCATATTGCAAGGCTACTTTAACCAAAACAGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 72 bp | CTTAAACATGTTGTATTCCTGGTCATATGTCAGAGGTaGTTCAGAAAAGACATGGGTCAGTCCCGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LKHVVFLVICQR*FRKDMGQSRQH Trigger: ATGCTGCCGGGACTGACCCATGTCTTTTCTGAATCACCTCTGACATATGACCAGGAATACAACATGTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505149.1 |
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| CDS CCA 72 bp | GTGGTCTTAAACATGTTGTATTCAGTTCAGCATGGCTaGCGAGGTCTCAGGAAACTTACAATCATGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VVLNMLYSVQHG*RGLRKLTIMEE Trigger: TTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGAATACAACATGTTTAAGACCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507476.5 ENST00000509088.6 |
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| CDS CCA 72 bp | CTTGCTCTCAAGATGTTTATAACAGTTCAGCATGGCTaGCGAGGTCTCAGGAAACTTACAATCATGGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LALKMFITVQHG*RGLRKLTIMEE Trigger: TTCCTCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGTTATAAACATCTTGAGAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515597.1 |
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| CDS CCA 72 bp | AGTCCTTGCTCTCAAGATGTTTATAACAGTTCAGCATaGCTGGCGAGGTCTCAGGAAACTTACAATCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPCSQDVYNSSA*LARSQETYNHG Trigger: TCCATGATTGTAAGTTTCCTGAGACCTCGCCAGCCATGCTGAACTGTTATAAACATCTTGAGAGCAAGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515597.1 |
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| CDS CAA 72 bp | CTTAAACATGTTGTATTCCTTTTCTCTGCAGACAGGTaGTCCCACTGTCTCTGCAGCTCTCATCAAAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LKHVVFLFSADR*SHCLCSSHQRG Trigger: TCCTCTTTGATGAGAGCTGCAGAGACAGTGGGACAACCTGTCTGCAGAGAAAAGGAATACAACATGTTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511241.5 |
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| CDS CAA 90 bp | CAGAAATGTAATGAGGCAGGATTATATAGAGGAAAGGACTCAGGGTaGGGCATAAGCATCATGAAGACTAGGCACTGGTGTGTAGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QKCNEAGLYRGKDSG*GISIMKTRHWCVES Trigger: ACTTTCTACACACCAGTGCCTAGTCTTCATGATGCTTATGCCCAACCCTGAGTCCTTTCCTCTATATAATCCTGCCTCATTACATTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000515597.1 ENST00000651041.1 |
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| CDS TCA 72 bp | AGCTGTGAAACGCTGAGCTGTTTCTTAATTTTTACGTaGTTTAGCTTCCTCTCTGCCAGCACTTTACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SCETLSCFLIFT*FSFLSASTLPQ Trigger: CTGTGGTAAAGTGCTGGCAGAGAGGAAGCTAAATCACGTAAAAATTAAGAAACAGCTCAGCGTTTCACAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000509088.6 ENST00000658852.1 ENST00000671503.1 |
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| CDS TCA 72 bp | CCTGTTCACTCTTGGTTCTTCTGTTTTCCTGCAAAGTaGGCCATTCAGGCATTGCATCTTCTGAAATTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVHSWFFCFPAK*AIQALHLLKFP Trigger: AGGAAATTTCAGAAGATGCAATGCCTGAATGGCTCACTTTGCAGGAAAACAGAAGAACCAAGAGTGAACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511895.1 ENST00000653314.1 |
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| CDS CAA 72 bp | GGGATGAAGCCAACTCTATCATGGTGGCTAAGCTTTTaGATGTGCTGCTGGATTTGGTTTGCCAGTATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GMKPTLSWWLSF*MCCWIWFASIL Trigger: TAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CAA 72 bp | GTTTTGGTTAAAGTAGCCTTGCAATATGGTTTGAAGTaGGGTAGCGTGATGCCTCCAGCTTCGTACTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLVKVALQYGLK*GSVMPPASYFL Trigger: CAAAAAGTACGAAGCTGGAGGCATCACGCTACCCAACTTCAAACCATATTGCAAGGCTACTTTAACCAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CAA 90 bp | TGCATCCCAGGGATGAAGCCAACTCTATCATGGTGGCTAAGCTTTTaGATGTGCTGCTGGATTTGGTTTGCCAGTATTTTATTAAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CIPGMKPTLSWWLSF*MCCWIWFASILLRI Trigger: TATCCTTAATAAAATACTGGCAAACCAAATCCAGCAGCACATCAAAAAGCTTAGCCACCATGATAGAGTTGGCTTCATCCCTGGGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CAA 72 bp | ATTTTACTAGGGACACTGAAGAGTTGGACGGGGCATTaGGATAAATGTAACCAAAGTGAAACCATCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILLGTLKSWTGH*DKCNQSETIIS Trigger: GGAGATGATGGTTTCACTTTGGTTACATTTATCCAAATGCCCCGTCCAACTCTTCAGTGTCCCTAGTAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000507761.1 ENST00000511895.1 ENST00000653314.1 ENST00000671503.1 |
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| CDS TCA 72 bp | TCAAGGGGAATGATTCCAGCTTTTGACCATTCAGTATaGTGTTGGCTGTGGGTTTGTAATATATGGCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SRGMIPAFDHSV*CWLWVCNIWLL Trigger: TAAGAGCCATATATTACAAACCCACAGCCAACATCATACTGAATGGTCAAAAGCTGGAATCATTCCCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 72 bp | TCCATGTATTCTCATTGTTCAGCTCCCATTTATAAGTaGGAACATGCAGTGTTGGGTTTTCTGTTCCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SMYSHCSAPIYK*EHAVLGFLFLC Trigger: ACACAGGAACAGAAAACCCAACACTGCATGTTCTCACTTATAAATGGGAGCTGAACAATGAGAATACATGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS GCA 72 bp | ATTACATTTATTGATTTGCATATGCTGAACCAAACTTaGATCCCAGGGATGAAGCCAACTCTATCATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ITFIDLHMLNQT*IPGMKPTLSWW Trigger: CCACCATGATAGAGTTGGCTTCATCCCTGGGATGCAAGTTTGGTTCAGCATATGCAAATCAATAAATGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS GCA 72 bp | CTTCATGATTTTCTTATATTGGCACTCTTTCGGGTCTaGTATATGAGTACCATAGGGGTTACAGGAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LHDFLILALFRV*YMSTIGVTGET Trigger: TGTTTCTCCTGTAACCCCTATGGTACTCATATAGCAGACCCGAAAGAGTGCCAATATAAGAAAATCATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS CCA 72 bp | TCTCTATACCAGATTTTACTAGGGACACTGAAGAGTTaGACGGGGCATTTGGATAAATGTAACCAAAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLYQILLGTLKS*TGHLDKCNQSE Trigger: TTCACTTTGGTTACATTTATCCAAATGCCCCGTCCAACTCTTCAGTGTCCCTAGTAAAATCTGGTATAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000507761.1 ENST00000511895.1 ENST00000653314.1 ENST00000671503.1 |
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| CDS TCA 72 bp | GAAGCAGTTCTAATTGATGAATTTTGGAGAAGTAATTaGGTACATCTGGCTCAGCATCTTCTAGGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: EAVLIDEFWRSN*VHLAQHLLGPS Trigger: AGATGGACCTAGAAGATGCTGAGCCAGATGTACTCAATTACTTCTCCAAAATTCATCAATTAGAACTGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000509088.6 ENST00000651041.1 |
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| CDS TCA 72 bp | GCTGAATGTGCTTATCAGCTTAAGAAGCATTTGGGCTaGGATTATGGGGTTTTTGTAGATATAGGATCATGT | + |
|
Preference number: 6 (lower is better) Translates to: AECAYQLKKHLG*DYGVFVDIGSC Trigger: ACATGATCCTATATCTACAAAAACCCCATAATCTCAGCCCAAATGCTTCTTAAGCTGATAAGCACATTCAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS TCA 72 bp | CTGTTCACTCTAATTGATGAATTTTGGAGAAGTAATTaGGTACATCTGGCTCAGCATCTTCTAGGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LFTLIDEFWRSN*VHLAQHLLGPS Trigger: AGATGGACCTAGAAGATGCTGAGCCAGATGTACTCAATTACTTCTCCAAAATTCATCAATTAGAGTGAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671503.1 |
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| CDS TCA 72 bp | GTGTCTTACCTAATTGATGAATTTTGGAGAAGTAATTaGGTACATCTGGCTCAGCATCTTCTAGGTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: VSYLIDEFWRSN*VHLAQHLLGPS Trigger: AGATGGACCTAGAAGATGCTGAGCCAGATGTACTCAATTACTTCTCCAAAATTCATCAATTAGGTAAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS CAA 90 bp | GCAGTGGTGGAATTTGCCCACTGGGTAATAGATGATAATTATGTATaGAGGACATTTATTACTACACAATTTTCCACCTTGAGCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: AVVEFAHWVIDDNYV*RTFITTQFSTLSRK Trigger: TTTCCTGCTCAAGGTGGAAAATTGTGTAGTAATAAATGTCCTCAATACATAATTATCATCTATTACCCAGTGGGCAAATTCCACCACTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670100.1 |
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| CDS TCA 72 bp | CACACAGAAACATGGGCAAATCTTAATGCATTACCCTaGATGAAACAATCCAGACACAAAAAGCTACATACA | + |
|
Preference number: 6 (lower is better) Translates to: HTETWANLNALP*MKQSRHKKLHT Trigger: TGTATGTAGCTTTTTGTGTCTGGATTGTTTCATTCAGGGTAATGCATTAAGATTTGCCCATGTTTCTGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000671503.1 |
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| CDS GCA 72 bp | AGCAAACATGATGATTACCAGGGAAATCCTGAGCATTaGAAATCCAGTTTTCAGTTGGAAAATACAGCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: SKHDDYQGNPEH*KSSFQLENTAK Trigger: TTTAGCTGTATTTTCCAACTGAAAACTGGATTTGCAATGCTCAGGATTTCCCTGGTAATCATCATGTTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658852.1 |
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| CDS CAA 72 bp | TGGATAGATTGCAAAATTTTTCTCCCATTCTATAAGTaGGCTATTCACCCTGATGATAGTTTCCTTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WIDCKIFLPFYK*AIHPDDSFLCC Trigger: ACAGCAAAGGAAACTATCATCAGGGTGAATAGCCAACTTATAGAATGGGAGAAAAATTTTGCAATCTATCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669293.1 |
||
| CDS TCA 72 bp | ATTTTCATCATGAAATCTTTACCTGTGCCTATGTCCTaGATGGTATTGCTTAGAGTTTCTTCTAGGGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: IFIMKSLPVPMS*MVLLRVSSRVF Trigger: AAAAACCCTAGAAGAAACTCTAAGCAATACCATTCAGGACATAGGCACAGGTAAAGATTTCATGATGAAAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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| CDS CAA 72 bp | CATTCATTCATAATTTGGCTCTATGCTTGCCTGTTGTaGGTATATAGGAATGGTAGAGAATTTTTCACATTG | + |
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Preference number: 6 (lower is better) Translates to: HSFIIWLYACLL*VYRNGREFFTL Trigger: CAATGTGAAAAATTCTCTACCATTCCTATATACCAACAACAGGCAAGCATAGAGCCAAATTATGAATGAATG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669293.1 |
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