Pregenerated sensors for LINC01043 (Homo sapiens)
Ensembl gene IDs: ENSG00000260343Ensembl transcript IDs: ENST00000565936.1, ENST00000633482.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCTGCCCGGTGTGTGCTCTCGCTTCCCTGGAGCACTCGGTATGTTaGTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTGGTGGGTTAC | + |
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Preference number: 5 (lower is better) Translates to: SCPVCALASLEHSVC*SWAFFEAAHIVVGY Trigger: GTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACCGGGCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | CAGGCACCGATGTTGCTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTaGCAAGTTCAGCTCACAGGAACACTGGACTCGGGCTGCACAGGC | + |
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Preference number: 5 (lower is better) Translates to: QAPMLLWCPPQSSLP*QVQLTGTLDSGCTG Trigger: GCCTGTGCAGCCCGAGTCCAGTGTTCCTGTGAGCTGAACTTGGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CGCCTCAGAGCAGCCTTCCCTGCCAAGTTCAGCTCACAGGAACACTaGACTCGGGCTGCACAGGCACACGCCCTGGCAGAAGCTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: RLRAAFPAKFSSQEH*TRAAQAHALAEADV Trigger: CACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCCGAGTCCAGTGTTCCTGTGAGCTGAACTTGGCAGGGAAGGCTGCTCTGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CCGGTGTGTGCTCTCGCTTCCCTGGAGCACTCGGTATGTTGCTCGTaGGCCTTCTTCGAGGCCGCCCACATCGTGGTGGGTTACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: PVCALASLEHSVCCS*AFFEAAHIVVGYRR Trigger: TCTCCTGTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | ACTGGACTCGGGCTGCACAGGCACACGCCCTGGCAGAAGCTGATGTaGGAGAAGAACTCCAACCACGAAGGGAGGCTGACCAATGGCACC | + |
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Preference number: 5 (lower is better) Translates to: TGLGLHRHTPWQKLM*EKNSNHEGRLTNGT Trigger: GGTGCCATTGGTCAGCCTCCCTTCGTGGTTGGAGTTCTTCTCCCACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCCGAGTCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | GGTCTTCAGGTGCCCTTGGATCTGAAGTTCCCCAGGCACCGATGTTaGTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTGCCAAGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: GLQVPLDLKFPRHRC*CGVRLRAAFPAKFS Trigger: GCTGAACTTGGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCACCTGAAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | TCAGCTCACAGGAACACTGGACTCGGGCTGCACAGGCACACGCCCTaGCAGAAGCTGATGTGGGAGAAGAACTCCAACCACGAAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: SAHRNTGLGLHRHTP*QKLMWEKNSNHEGR Trigger: CCTCCCTTCGTGGTTGGAGTTCTTCTCCCACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCCGAGTCCAGTGTTCCTGTGAGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CGAGGCCGCCCACATCGTGGTGGGTTACAGGAGAAGGGAGCCGTGTaGATACTAGGTCTTCAGGTGCCCTTGGATCTGAAGTTCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RGRPHRGGLQEKGAV*ILGLQVPLDLKFPR Trigger: CCTGGGGAACTTCAGATCCAAGGGCACCTGAAGACCTAGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGGGCGGCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CTTGTCTTGATTGTGAATCCTGCCCGGTGTGTGCTCTCGCTTCCCTaGAGCACTCGGTATGTTGCTCGTGGGCCTTCTTCGAGGCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: LVLIVNPARCVLSLP*STRYVARGPSSRPP Trigger: GGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACCGGGCAGGATTCACAATCAAGACAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | TCAGGTGCCCTTGGATCTGAAGTTCCCCAGGCACCGATGTTGCTGTaGTGTCCGCCTCAGAGCAGCCTTCCCTGCCAAGTTCAGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: SGALGSEVPQAPMLL*CPPQSSLPCQVQLT Trigger: TGTGAGCTGAACTTGGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCACCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CGGTATGTTGCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTGGTaGGTTACAGGAGAAGGGAGCCGTGTGGATACTAGGTCTTCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RYVARGPSSRPPTSW*VTGEGSRVDTRSSG Trigger: ACCTGAAGACCTAGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | CCTCTGGATGTACCATCAGCCTGGGTGATAAAAGGGCCAGGCACCTaGGGACGCCGCTCATCCTGGGCAATGGAGAGCTGCAAACATGGT | + |
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Preference number: 5 (lower is better) Translates to: PLDVPSAWVIKGPGT*GRRSSWAMESCKHG Trigger: ACCATGTTTGCAGCTCTCCATTGCCCAGGATGAGCGGCGTCCCCAGGTGCCTGGCCCTTTTATCACCCAGGCTGATGGTACATCCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | AAGCTTCTTCCCGGCCATTGCTGGCCTTGCTTGGGGGCTGAGCCATaGCTGCCTCTGGATGTACCATCAGCCTGGGTGATAAAAGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: KLLPGHCWPCLGAEP*LPLDVPSAWVIKGP Trigger: TGGCCCTTTTATCACCCAGGCTGATGGTACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | ACTCGGTATGTTGCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTaGTGGGTTACAGGAGAAGGGAGCCGTGTGGATACTAGGTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TRYVARGPSSRPPTS*WVTGEGSRVDTRSS Trigger: TGAAGACCTAGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | GCCTGGGTGATAAAAGGGCCAGGCACCTGGGGACGCCGCTCATCCTaGGCAATGGAGAGCTGCAAACATGGTTCATTCTGGAAACATTCT | + |
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Preference number: 5 (lower is better) Translates to: AWVIKGPGTWGRRSS*AMESCKHGSFWKHS Trigger: AGAATGTTTCCAGAATGAACCATGTTTGCAGCTCTCCATTGCCCAGGATGAGCGGCGTCCCCAGGTGCCTGGCCCTTTTATCACCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | ACTCTGCAGAGAATCCCATTGAATAAGCTTCTTCCCGGCCATTGCTaGCCTTGCTTGGGGGCTGAGCCATGGCTGCCTCTGGATGTACCA | + |
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Preference number: 5 (lower is better) Translates to: TLQRIPLNKLLPGHC*PCLGAEPWLPLDVP Trigger: TGGTACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCTCTGCAGAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | ACAACTCTGCAGAGAATCCCATTGAATAAGCTTCTTCCCGGCCATTaGTGGCCTTGCTTGGGGGCTGAGCCATGGCTGCCTCTGGATGTA | + |
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Preference number: 5 (lower is better) Translates to: TTLQRIPLNKLLPGH*WPCLGAEPWLPLDV Trigger: TACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCTCTGCAGAGTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | GCAGGGCTTCTCTGCATTCACCTGCTGAAAACTGGATTCTTCTCCTaGAGCCAAACACACTGTGTGCTCCACGTGCTCATGTGTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: AGLLCIHLLKTGFFS*SQTHCVLHVLMCAC Trigger: GCATGCACACATGAGCACGTGGAGCACACAGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTTTCAGCAGGTGAATGCAGAGAAGCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | CTTCTCCTGCAGCCAAACACACTGTGTGCTCCACGTGCTCATGTGTaGATGCCTGTCCATCATCACCTTGTCTTGATTGTGAATCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLLQPNTLCAPRAHV*MPVHHHLVLIVNPA Trigger: GGCAGGATTCACAATCAAGACAAGGTGATGATGGACAGGCATGCACACATGAGCACGTGGAGCACACAGTGTGTTTGGCTGCAGGAGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 90 bp | TTTGTCCTGAGCAGCAGGGCTTCTCTGCATTCACCTGCTGAAAACTaGATTCTTCTCCTGCAGCCAAACACACTGTGTGCTCCACGTGCT | + |
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Preference number: 5 (lower is better) Translates to: FVLSSRASLHSPAEN*ILLLQPNTLCAPRA Trigger: AGCACGTGGAGCACACAGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTTTCAGCAGGTGAATGCAGAGAAGCCCTGCTGCTCAGGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS TCA 90 bp | AACATTCTTTGTCCTGAGCAGCAGGGCTTCTCTGCATTCACCTGCTaGAAACTGGATTCTTCTCCTGCAGCCAAACACACTGTGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: NILCPEQQGFSAFTC*KLDSSPAAKHTVCS Trigger: GGAGCACACAGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTTTCAGCAGGTGAATGCAGAGAAGCCCTGCTGCTCAGGACAAAGAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | AAACTGGATTCTTCTCCTGCAGCCAAACACACTGTGTGCTCCACGTaGTCATGTGTGCATGCCTGTCCATCATCACCTTGTCTTGATTGT | + |
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Preference number: 5 (lower is better) Translates to: KLDSSPAAKHTVCST*SCVHACPSSPCLDC Trigger: ACAATCAAGACAAGGTGATGATGGACAGGCATGCACACATGAGCACGTGGAGCACACAGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS TCA 90 bp | ATGAAAGAAAGGGCTTCCACTGGCTCTGCATCCTTAAGTGACGATTaGTTGAGAAGTCAGCCTCTTGTTTTCTATGCCCACATCCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: MKERASTGSASLSDD*LRSQPLVFYAHIPA Trigger: TGCAGGGATGTGGGCATAGAAAACAAGAGGCTGACTTCTCAATCAATCGTCACTTAAGGATGCAGAGCCAGTGGAAGCCCTTTCTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 90 bp | CGATTGATTGAGAAGTCAGCCTCTTGTTTTCTATGCCCACATCCCTaGAAGCTGAAAGTCAGAACAACTCTGCAGAGAATCCCATTGAAT | + |
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Preference number: 5 (lower is better) Translates to: RLIEKSASCFLCPHP*KLKVRTTLQRIPLN Trigger: ATTCAATGGGATTCTCTGCAGAGTTGTTCTGACTTTCAGCTTGCAGGGATGTGGGCATAGAAAACAAGAGGCTGACTTCTCAATCAATCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GCTCTCGCTTCCCTGGAGCACTCGGTATGTTGCTCGTaGGCCTTCTTCGAGGCCGCCCACATCGTGGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: ALASLEHSVCCS*AFFEAAHIVVG Trigger: ACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GCTGAGCCATGGCTGCCTCTGGATGTACCATCAGCCTaGGTGATAAAAGGGCCAGGCACCTGGGGACGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AEPWLPLDVPSA*VIKGPGTWGRR Trigger: GCGGCGTCCCCAGGTGCCTGGCCCTTTTATCACCCAGGCTGATGGTACATCCAGAGGCAGCCATGGCTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 90 bp | ATCCTGCCCGGTGTGTGCTCTCGCTTCCCTGGAGCACTCGGTATGTaGCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTGGTGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: ILPGVCSRFPGALGM*LVGLLRGRPHRGGL Trigger: TAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACCGGGCAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS TCA 72 bp | GACTCGGGCTGCACAGGCACACGCCCTGGCAGAAGCTaGTGTGGGAGAAGAACTCCAACCACGAAGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: DSGCTGTRPGRS*CGRRTPTTKGG Trigger: GCCTCCCTTCGTGGTTGGAGTTCTTCTCCCACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCCGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | GTGCCCTTGGATCTGAAGTTCCCCAGGCACCGATGTTaGTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VPLDLKFPRHRC*CGVRLRAAFPA Trigger: GGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | GTGTGTGCTCTCGCTTCCCTGGAGCACTCGGTATGTTaGTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTG | + |
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Preference number: 6 (lower is better) Translates to: VCALASLEHSVC*SWAFFEAAHIV Trigger: CACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GGGCTGCACAGGCACACGCCCTGGCAGAAGCTGATGTaGGAGAAGAACTCCAACCACGAAGGGAGGCTGACC | + |
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Preference number: 6 (lower is better) Translates to: GLHRHTPWQKLM*EKNSNHEGRLT Trigger: GGTCAGCCTCCCTTCGTGGTTGGAGTTCTTCTCCCACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTGGTaGGTTACAGGAGAAGGGAGCCGTGTGGATACTAGG | + |
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Preference number: 6 (lower is better) Translates to: ARGPSSRPPTSW*VTGEGSRVDTR Trigger: CCTAGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GTACCATCAGCCTGGGTGATAAAAGGGCCAGGCACCTaGGGACGCCGCTCATCCTGGGCAATGGAGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VPSAWVIKGPGT*GRRSSWAMESC Trigger: GCAGCTCTCCATTGCCCAGGATGAGCGGCGTCCCCAGGTGCCTGGCCCTTTTATCACCCAGGCTGATGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | CCCGGCCATTGCTGGCCTTGCTTGGGGGCTGAGCCATaGCTGCCTCTGGATGTACCATCAGCCTGGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: PGHCWPCLGAEP*LPLDVPSAWVI Trigger: TATCACCCAGGCTGATGGTACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 72 bp | GGTGCCCTTGGATCTGAAGTTCCCCAGGCACCGATGTaGCTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: GALGSEVPQAPM*LWCPPQSSLPC Trigger: GCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 72 bp | GGTGTGTGCTCTCGCTTCCCTGGAGCACTCGGTATGTaGCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGT | + |
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Preference number: 6 (lower is better) Translates to: GVCSRFPGALGM*LVGLLRGRPHR Trigger: ACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | GTTGCTCGTGGGCCTTCTTCGAGGCCGCCCACATCGTaGTGGGTTACAGGAGAAGGGAGCCGTGTGGATACT | + |
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Preference number: 6 (lower is better) Translates to: VARGPSSRPPTS*WVTGEGSRVDT Trigger: AGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGGGCGGCCTCGAAGAAGGCCCACGAGCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | ATGTTGCTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTaGCAAGTTCAGCTCACAGGAACACTGGACTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: MLLWCPPQSSLP*QVQLTGTLDSG Trigger: GCCCGAGTCCAGTGTTCCTGTGAGCTGAACTTGGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | AGGAACACTGGACTCGGGCTGCACAGGCACACGCCCTaGCAGAAGCTGATGTGGGAGAAGAACTCCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: RNTGLGLHRHTP*QKLMWEKNSNH Trigger: GTGGTTGGAGTTCTTCTCCCACATCAGCTTCTGCCAGGGCGTGTGCCTGTGCAGCCCGAGTCCAGTGTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 90 bp | AGGTCTTCAGGTGCCCTTGGATCTGAAGTTCCCCAGGCACCGATGTaGCTGTGGTGTCCGCCTCAGAGCAGCCTTCCCTGCCAAGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSSGALGSEVPQAPM*LWCPPQSSLPCQVQ Trigger: CTGAACTTGGCAGGGAAGGCTGCTCTGAGGCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCACCTGAAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | ATTGTGAATCCTGCCCGGTGTGTGCTCTCGCTTCCCTaGAGCACTCGGTATGTTGCTCGTGGGCCTTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: IVNPARCVLSLP*STRYVARGPSS Trigger: CGAAGAAGGCCCACGAGCAACATACCGAGTGCTCCAGGGAAGCGAGAGCACACACCGGGCAGGATTCACAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 90 bp | TTACAGGAGAAGGGAGCCGTGTGGATACTAGGTCTTCAGGTGCCCTaGGATCTGAAGTTCCCCAGGCACCGATGTTGCTGTGGTGTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LQEKGAVWILGLQVP*DLKFPRHRCCCGVR Trigger: GCGGACACCACAGCAACATCGGTGCCTGGGGAACTTCAGATCCAAGGGCACCTGAAGACCTAGTATCCACACGGCTCCCTTCTCCTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 90 bp | AGAATCCCATTGAATAAGCTTCTTCCCGGCCATTGCTGGCCTTGCTaGGGGGCTGAGCCATGGCTGCCTCTGGATGTACCATCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RIPLNKLLPGHCWPC*GAEPWLPLDVPSAW Trigger: CCAGGCTGATGGTACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | CAGAGAATCCCATTGAATAAGCTTCTTCCCGGCCATTaGTGGCCTTGCTTGGGGGCTGAGCCATGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: QRIPLNKLLPGH*WPCLGAEPWLP Trigger: AGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | AGAATCCCATTGAATAAGCTTCTTCCCGGCCATTGCTaGCCTTGCTTGGGGGCTGAGCCATGGCTGCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RIPLNKLLPGHC*PCLGAEPWLPL Trigger: CAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 72 bp | TTGAATAAGCTTCTTCCCGGCCATTGCTGGCCTTGCTaGGGGGCTGAGCCATGGCTGCCTCTGGATGTACCA | + |
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Preference number: 6 (lower is better) Translates to: LNKLLPGHCWPC*GAEPWLPLDVP Trigger: TGGTACATCCAGAGGCAGCCATGGCTCAGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | CCCAGTCAACTGGAGCAAGGGTGCTGTGGGGTGATCTaGATGTTTGATGGCTCCATCTTGAAGGAACGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSQLEQGCCGVI*MFDGSILKERS Trigger: GGACCGTTCCTTCAAGATGGAGCCATCAAACATGCAGATCACCCCACAGCACCCTTGCTCCAGTTGACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | CCACATCGTGGTGGGTTACAGGAGAAGGGAGCCGTGTaGATACTAGGTCTTCAGGTGCCCTTGGATCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PHRGGLQEKGAV*ILGLQVPLDLK Trigger: CTTCAGATCCAAGGGCACCTGAAGACCTAGTATCCACACGGCTCCCTTCTCCTGTAACCCACCACGATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | CACCATGTTACCAAACCCAGTCAACTGGAGCAAGGGTaGTGTGGGGTGATCTGCATGTTTGATGGCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: HHVTKPSQLEQG*CGVICMFDGSI Trigger: GATGGAGCCATCAAACATGCAGATCACCCCACAGCACCCTTGCTCCAGTTGACTGGGTTTGGTAACATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | TCTTCTCCTGCAGCCAAACACACTGTGTGCTCCACGTaGTCATGTGTGCATGCCTGTCCATCATCACCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SSPAAKHTVCST*SCVHACPSSPC Trigger: ACAAGGTGATGATGGACAGGCATGCACACATGAGCACGTGGAGCACACAGTGTGTTTGGCTGCAGGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | ACCTGGGGACGCCGCTCATCCTGGGCAATGGAGAGCTaGAAACATGGTTCATTCTGGAAACATTCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TWGRRSSWAMES*KHGSFWKHSLS Trigger: GGACAAAGAATGTTTCCAGAATGAACCATGTTTGCAGCTCTCCATTGCCCAGGATGAGCGGCGTCCCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 72 bp | GCTCATGTGTGCATGCCTGTCCATCATCACCTTGTCTaGATTGTGAATCCTGCCCGGTGTGTGCTCTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: AHVCMPVHHHLV*IVNPARCVLSL Trigger: AAGCGAGAGCACACACCGGGCAGGATTCACAATCAAGACAAGGTGATGATGGACAGGCATGCACACATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CAA 90 bp | CATCCCTGCAAGCTGAAAGTCAGAACAACTCTGCAGAGAATCCCATaGAATAAGCTTCTTCCCGGCCATTGCTGGCCTTGCTTGGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: HPCKLKVRTTLQRIP*NKLLPGHCWPCLGA Trigger: AGCCCCCAAGCAAGGCCAGCAATGGCCGGGAAGAAGCTTATTCAATGGGATTCTCTGCAGAGTTGTTCTGACTTTCAGCTTGCAGGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS TCA 72 bp | TGTCCTGAGCAGCAGGGCTTCTCTGCATTCACCTGCTaGAAACTGGATTCTTCTCCTGCAGCCAAACACACT | + |
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Preference number: 6 (lower is better) Translates to: CPEQQGFSAFTC*KLDSSPAAKHT Trigger: AGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTTTCAGCAGGTGAATGCAGAGAAGCCCTGCTGCTCAGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | CAGCCAAACACACTGTGTGCTCCACGTGCTCATGTGTaGATGCCTGTCCATCATCACCTTGTCTTGATTGTG | + |
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Preference number: 6 (lower is better) Translates to: QPNTLCAPRAHV*MPVHHHLVLIV Trigger: CACAATCAAGACAAGGTGATGATGGACAGGCATGCACACATGAGCACGTGGAGCACACAGTGTGTTTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS CCA 72 bp | AGCAGCAGGGCTTCTCTGCATTCACCTGCTGAAAACTaGATTCTTCTCCTGCAGCCAAACACACTGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRASLHSPAEN*ILLLQPNTLCA Trigger: AGCACACAGTGTGTTTGGCTGCAGGAGAAGAATCCAGTTTTCAGCAGGTGAATGCAGAGAAGCCCTGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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| CDS GCA 72 bp | GAGAAGTCAGCCTCTTGTTTTCTATGCCCACATCCCTaGAAGCTGAAAGTCAGAACAACTCTGCAGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: EKSASCFLCPHP*KLKVRTTLQRI Trigger: GATTCTCTGCAGAGTTGTTCTGACTTTCAGCTTGCAGGGATGTGGGCATAGAAAACAAGAGGCTGACTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000565936.1 ENST00000633482.1 |
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