Pregenerated sensors for LINC01020 (Homo sapiens)
Ensembl gene IDs: ENSG00000215231Ensembl transcript IDs: ENST00000507599.2, ENST00000508201.5, ENST00000509382.5, ENST00000514474.1, ENST00000654932.1, ENST00000656049.1, ENST00000656591.1, ENST00000657166.1, ENST00000658399.1, ENST00000659550.1, ENST00000660582.1, ENST00000662011.1, ENST00000666520.1, ENST00000666689.1, ENST00000668023.1, ENST00000670808.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCTTGGCAGAGAGAGAGATTAAATGTGTGAGACCTGGAGTGTGTTaGGGTGGTCGGGGGATGGCCAGCACTGGCTCTGCCTCCGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PLAEREIKCVRPGVC*GGRGMASTGSASAV Trigger: CACTGCGGAGGCAGAGCCAGTGCTGGCCATCCCCCGACCACCCCAACACACTCCAGGTCTCACACATTTAATCTCTCTCTCTGCCAAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659550.1 |
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| CDS CCA 90 bp | ATATGTGTTGGATCTCTAACGGGAGGCGGGAAACTCGCTGTACTCTaGGGATGCAGCGCAGAGTCCACTGGGATGCGTCTGCAGGAGTGC | + |
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Preference number: 5 (lower is better) Translates to: ICVGSLTGGGKLAVL*GCSAESTGMRLQEC Trigger: GCACTCCTGCAGACGCATCCCAGTGGACTCTGCGCTGCATCCCCAGAGTACAGCGAGTTTCCCGCCTCCCGTTAGAGATCCAACACATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000660582.1 ENST00000670808.1 |
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| CDS CCA 90 bp | CAGCTCATCTTTGGTCCTCAGACACCTGGATCCAAGACCTTCTCATaGGCCCTGGAAATTCGGGGGCTGAGAGGCACTGCCCCTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: QLIFGPQTPGSKTFS*ALEIRGLRGTAPLS Trigger: AGAAAGAGGGGCAGTGCCTCTCAGCCCCCGAATTTCCAGGGCCCATGAGAAGGTCTTGGATCCAGGTGTCTGAGGACCAAAGATGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | TGGGACCAAGGATGGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTaGTGGTGTGTCTGGCCCACTGATCAAGTATCTGTCCACCCAACT | + |
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Preference number: 5 (lower is better) Translates to: WDQGWSDVCRFAVVM*WCVWPTDQVSVHPT Trigger: AGTTGGGTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | GACCAAGGATGGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTGGTaGTGTGTCTGGCCCACTGATCAAGTATCTGTCCACCCAACTATG | + |
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Preference number: 5 (lower is better) Translates to: DQGWSDVCRFAVVMW*CVWPTDQVSVHPTM Trigger: CATAGTTGGGTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | TGGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTGGTGGTGTGTCTaGCCCACTGATCAAGTATCTGTCCACCCAACTATGATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: WSDVCRFAVVMWWCV*PTDQVSVHPTMMTS Trigger: TGAAGTCATCATAGTTGGGTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | TTAAAATGTGGGACCAAGGATGGAGTGATGTCTGCCGCTTTGCCGTaGTCATGTGGTGGTGTGTCTGGCCCACTGATCAAGTATCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: LKCGTKDGVMSAALP*SCGGVSGPLIKYLS Trigger: GGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTCCCACATTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | AGAAGAATTTCTGCTCACTCAGCTCATCTTTGGTCCTCAGACACCTaGATCCAAGACCTTCTCATGGGCCCTGGAAATTCGGGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RRISAHSAHLWSSDT*IQDLLMGPGNSGAE Trigger: CTCAGCCCCCGAATTTCCAGGGCCCATGAGAAGGTCTTGGATCCAGGTGTCTGAGGACCAAAGATGAGCTGAGTGAGCAGAAATTCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS TCA 90 bp | CTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTCACTTTaGAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTGCAGGTTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LPTPGISPYGFHPSL*SESVLVAAGHCRLR Trigger: TCTCAACCTGCAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000670808.1 |
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| CDS CCA 90 bp | ACTCTGTCTTCCAACTGGCCTACCCACCCCAGGAATATCTCCATATaGGTTTCATCCGTCACTTTGAAGCGAGTCAGTTCTGGTAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TLSSNWPTHPRNISI*VSSVTLKRVSSGSS Trigger: GCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS TCA 90 bp | GTGTCTATGCTTCTCTGCCAGGCAGCAAACCCTGCAATTTGCTTTTaGATCCTACAACGGAGTACTTGGATGGATGGGGTGGTTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VSMLLCQAANPAICF*ILQRSTWMDGVVAG Trigger: TCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGGTTTGCTGCCTGGCAGAGAAGCATAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS TCA 90 bp | CCCTTGAGTTCCATGATGGCTTTCACAGATAGACATAGGAGATATTaGGCTCGAATTCTGCGGTGGACGGGGGTTTCTTTGCCTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PLSSMMAFTDRHRRY*ARILRWTGVSLPLV Trigger: CACCAGAGGCAAAGAAACCCCCGTCCACCGCAGAATTCGAGCTCAATATCTCCTATGTCTATCTGTGAAAGCCATCATGGAACTCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660582.1 |
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| CDS GCA 90 bp | TGTACCCTCCCCCAAACCTGGGTGAACATGACCAAGAAGAATTTCTaGTCACTCAGCTCATCTTTGGTCCTCAGACACCTGGATCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: CTLPQTWVNMTKKNF*SLSSSLVLRHLDPR Trigger: TCTTGGATCCAGGTGTCTGAGGACCAAAGATGAGCTGAGTGAGCAGAAATTCTTCTTGGTCATGTTCACCCAGGTTTGGGGGAGGGTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | TGTCACTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: CHSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507599.2 |
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| CDS CCA 90 bp | AGGATGCCTTTGAAGGATACTTGTGAAGGTGGAACCACCGTGGCTTaGAAGCTTCGCAGATGTCGCTGTCTCCAAGGATCAATTGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: RMPLKDTCEGGTTVA*KLRRCRCLQGSIAN Trigger: GTTTGCAATTGATCCTTGGAGACAGCGACATCTGCGAAGCTTCCAAGCCACGGTGGTTCCACCTTCACAAGTATCCTTCAAAGGCATCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 90 bp | CAATCCTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: QSSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668023.1 |
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| CDS TCA 90 bp | CTTCTAAAGCAAACTCATGGAGGTTGTCTGCAGGCAGAAGGTGGCTaGAGAAGCTCTTCTCGCAGTCCACTTCCAGGAAAGACACTAAAG | + |
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Preference number: 5 (lower is better) Translates to: LLKQTHGGCLQAEGG*RSSSRSPLPGKTLK Trigger: CTTTAGTGTCTTTCCTGGAAGTGGACTGCGAGAAGAGCTTCTTCAGCCACCTTCTGCCTGCAGACAACCTCCATGAGTTTGCTTTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS GCA 90 bp | TTGCTTTTGAATCCTACAACGGAGTACTTGGATGGATGGGGTGGTTaGAGGATGCCTTTGAAGGATACTTGTGAAGGTGGAACCACCGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLNPTTEYLDGWGG*RMPLKDTCEGGTTV Trigger: CACGGTGGTTCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 90 bp | ATATGCTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: ICSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000508201.5 ENST00000657166.1 ENST00000666520.1 |
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| CDS CCA 90 bp | TTTTCCTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: FSSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656591.1 ENST00000662011.1 ENST00000666689.1 |
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| CDS CCA 90 bp | TATTCCTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: YSSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656049.1 ENST00000658399.1 |
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| CDS GCA 90 bp | ATAGGAGATATTGAGCTCGAATTCTGCGGTGGACGGGGGTTTCTTTaGCTCTGGTGGAATTCCTTTCCCTCTGAAATGCCCTTATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: IGDIELEFCGGRGFL*LWWNSFPSEMPLFS Trigger: TGAGAATAAGGGCATTTCAGAGGGAAAGGAATTCCACCAGAGGCAAAGAAACCCCCGTCCACCGCAGAATTCGAGCTCAATATCTCCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660582.1 |
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| CDS CCA 90 bp | GAGAATGAAAATAAGTCTGAGTTGTGGCTCAAGGCTGCTCCAACTTaGTCACAATTGGAGTCCTCCTGTCCTGTAAGGGGCAGCAATTCT | + |
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Preference number: 5 (lower is better) Translates to: ENENKSELWLKAAPT*SQLESSCPVRGSNS Trigger: AGAATTGCTGCCCCTTACAGGACAGGAGGACTCCAATTGTGACCAAGTTGGAGCAGCCTTGAGCCACAACTCAGACTTATTTTCATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 13 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CCA 90 bp | CCCTGCAATTTGCTTTTGAATCCTACAACGGAGTACTTGGATGGATaGGGTGGTTGCAGGATGCCTTTGAAGGATACTTGTGAAGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: PCNLLLNPTTEYLDG*GGCRMPLKDTCEGG Trigger: TCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 90 bp | AAATTCTCAAGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTC | + |
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Preference number: 5 (lower is better) Translates to: KFSSPLSGVNTLSSN*PTHPRNISIWVSSV Trigger: GACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACTTGAGAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000509382.5 ENST00000654932.1 ENST00000660582.1 ENST00000670808.1 |
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| CDS CCA 90 bp | TGGAACAGTTATTGCTATTTCTCTCTTAAAATGTGGGACCAAGGATaGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTGGTGGTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: WNSYCYFSLKMWDQG*SDVCRFAVVMWWCV Trigger: GACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTCCCACATTTTAAGAGAGAAATAGCAATAACTGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 90 bp | GCTCTGCCTCCGCAGTGGGATGATCACGACTCGACTTTATCTGTCTaGGTTGCCATTCATTTTAATTCTAAAATGAGGCCTTCTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: ALPPQWDDHDSTLSV*VAIHFNSKMRPSSS Trigger: AGAGCTAGAAGGCCTCATTTTAGAATTAAAATGAATGGCAACCCAGACAGATAAAGTCGAGTCGTGATCATCCCACTGCGGAGGCAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000659550.1 |
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| CDS TCA 90 bp | TGTAATGGCCTTTTCCTCCCTCACATTCACTTCGACCCAGATTTCTaGCTTAGCTCTAACAGGACACAAAACTGTCATCTCTACCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: CNGLFLPHIHFDPDF*LSSNRTQNCHLYPA Trigger: TGCTGGGTAGAGATGACAGTTTTGTGTCCTGTTAGAGCTAAGTCAGAAATCTGGGTCGAAGTGAATGTGAGGGAGGAAAAGGCCATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS GCA 90 bp | CAGGCTAATTTTTATATTGTTTGTAGAGATAGCGTTTTGTCATGTTaGTCACGGTGGTCTCAAACTCTGAGTTCAAGCCGTCCACCCACC | + |
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Preference number: 5 (lower is better) Translates to: QANFYIVCRDSVLSC*SRWSQTLSSSRPPT Trigger: GGTGGGTGGACGGCTTGAACTCAGAGTTTGAGACCACCGTGAGCAACATGACAAAACGCTATCTCTACAAACAATATAAAAATTAGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000654932.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000670808.1 |
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| CDS GCA 90 bp | GACGGGGGTTTCTTTGCCTCTGGTGGAATTCCTTTCCCTCTGAAATaGCCTTATTCTCAAGGACAATTTTCTTTCTCCGTGGTTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: DGGFFASGGIPFPLK*PYSQGQFSFSVVYC Trigger: ACAATAAACCACGGAGAAAGAAAATTGTCCTTGAGAATAAGGGCATTTCAGAGGGAAAGGAATTCCACCAGAGGCAAAGAAACCCCCGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660582.1 |
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| CDS CCA 90 bp | TATTTGACTTTCTTCAAATTGAAGCCTTCTTCTAAAGCAAACTCATaGAGGTTGTCTGCAGGCAGAAGGTGGCTGAAGAAGCTCTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: YLTFFKLKPSSKANS*RLSAGRRWLKKLFS Trigger: CGAGAAGAGCTTCTTCAGCCACCTTCTGCCTGCAGACAACCTCCATGAGTTTGCTTTAGAAGAAGGCTTCAATTTGAAGAAAGTCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS TCA 90 bp | AAAGAAGTGATGTTTCCTCCTCAGGGTGTCATAACTGTAGGCAGATaGTATCAGTTTGTCCTATTATTGAGGATATTAAGTTGGATCACT | + |
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Preference number: 5 (lower is better) Translates to: KEVMFPPQGVITVGR*YQFVLLLRILSWIT Trigger: AGTGATCCAACTTAATATCCTCAATAATAGGACAAACTGATATCATCTGCCTACAGTTATGACACCCTGAGGAGGAAACATCACTTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656049.1 ENST00000658399.1 |
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| CDS CCA 72 bp | TGGAGTGTGTTGGGGTGGTCGGGGGATGGCCAGCACTaGCTCTGCCTCCGCAGTGGGATGATCACGACTCGA | + |
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Preference number: 6 (lower is better) Translates to: WSVLGWSGDGQH*LCLRSGMITTR Trigger: TCGAGTCGTGATCATCCCACTGCGGAGGCAGAGCCAGTGCTGGCCATCCCCCGACCACCCCAACACACTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659550.1 |
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| CDS GCA 72 bp | GTGTTGGGGTGGTCGGGGGATGGCCAGCACTGGCTCTaGCTCCGCAGTGGGATGATCACGACTCGACTTTAT | + |
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Preference number: 6 (lower is better) Translates to: VLGWSGDGQHWL*LRSGMITTRLY Trigger: ATAAAGTCGAGTCGTGATCATCCCACTGCGGAGGCAGAGCCAGTGCTGGCCATCCCCCGACCACCCCAACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000659550.1 |
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| CDS CCA 72 bp | ACTCGCTGTACTCTGGGGATGCAGCGCAGAGTCCACTaGGATGCGTCTGCAGGAGTGCGCAGCAGTGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TRCTLGMQRRVH*DASAGVRSSEQ Trigger: TTGCTCACTGCTGCGCACTCCTGCAGACGCATCCCAGTGGACTCTGCGCTGCATCCCCAGAGTACAGCGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000660582.1 ENST00000670808.1 |
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| CDS CCA 72 bp | GGATCTCTAACGGGAGGCGGGAAACTCGCTGTACTCTaGGGATGCAGCGCAGAGTCCACTGGGATGCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSLTGGGKLAVL*GCSAESTGMRL Trigger: CAGACGCATCCCAGTGGACTCTGCGCTGCATCCCCAGAGTACAGCGAGTTTCCCGCCTCCCGTTAGAGATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000660582.1 ENST00000670808.1 |
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| CDS CCA 72 bp | GTCGGGGGATGGCCAGCACTGGCTCTGCCTCCGCAGTaGGATGATCACGACTCGACTTTATCTGTCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: VGGWPALALPPQ*DDHDSTLSVWV Trigger: AACCCAGACAGATAAAGTCGAGTCGTGATCATCCCACTGCGGAGGCAGAGCCAGTGCTGGCCATCCCCCGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000659550.1 |
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| CDS CCA 72 bp | GGGACCAAGGATGGAGTGATGTCTGCCGCTTTGCCGTaGTCATGTGGTGGTGTGTCTGGCCCACTGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: GTKDGVMSAALP*SCGGVSGPLIK Trigger: CTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 72 bp | TTTGGTCCTCAGACACCTGGATCCAAGACCTTCTCATaGGCCCTGGAAATTCGGGGGCTGAGAGGCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: FGPQTPGSKTFS*ALEIRGLRGTA Trigger: GGCAGTGCCTCTCAGCCCCCGAATTTCCAGGGCCCATGAGAAGGTCTTGGATCCAGGTGTCTGAGGACCAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 72 bp | GTCTGCCGCTTTGCCGTGGTCATGTGGTGGTGTGTCTaGCCCACTGATCAAGTATCTGTCCACCCAACTATG | + |
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Preference number: 6 (lower is better) Translates to: VCRFAVVMWWCV*PTDQVSVHPTM Trigger: CATAGTTGGGTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 72 bp | TGGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTGGTaGTGTGTCTGGCCCACTGATCAAGTATCTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: WSDVCRFAVVMW*CVWPTDQVSVH Trigger: GTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 72 bp | GGATGGAGTGATGTCTGCCGCTTTGCCGTGGTCATGTaGTGGTGTGTCTGGCCCACTGATCAAGTATCTGTC | + |
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Preference number: 6 (lower is better) Translates to: GWSDVCRFAVVM*WCVWPTDQVSV Trigger: GACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS TCA 72 bp | ATGGGGTGGTTGCAGGATGCCTTTGAAGGATACTTGTaGAGGTGGAACCACCGTGGCTTGGAAGCTTCGCAG | + |
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Preference number: 6 (lower is better) Translates to: MGWLQDAFEGYL*RWNHRGLEASQ Trigger: CTGCGAAGCTTCCAAGCCACGGTGGTTCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS TCA 72 bp | CAAACTCATGGAGGTTGTCTGCAGGCAGAAGGTGGCTaGAGAAGCTCTTCTCGCAGTCCACTTCCAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: QTHGGCLQAEGG*RSSSRSPLPGK Trigger: CTTTCCTGGAAGTGGACTGCGAGAAGAGCTTCTTCAGCCACCTTCTGCCTGCAGACAACCTCCATGAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CAA 72 bp | GAGTTGTGGCTCAAGGCTGCTCCAACTTGGTCACAATaGGAGTCCTCCTGTCCTGTAAGGGGCAGCAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: ELWLKAAPTWSQ*ESSCPVRGSNS Trigger: AGAATTGCTGCCCCTTACAGGACAGGAGGACTCCAATTGTGACCAAGTTGGAGCAGCCTTGAGCCACAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS CAA 90 bp | CCTACAACGGAGTACTTGGATGGATGGGGTGGTTGCAGGATGCCTTaGAAGGATACTTGTGAAGGTGGAACCACCGTGGCTTGGAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTTEYLDGWGGCRMP*KDTCEGGTTVAWKL Trigger: AAGCTTCCAAGCCACGGTGGTTCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
||
| CDS CAA 90 bp | CCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTCACTTaGAAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTGCAGGTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTHPRNISIWVSSVT*KRVSSGSSRSLQVE Trigger: CTCAACCTGCAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000670808.1 |
||
| CDS CAA 90 bp | CCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTCACTTaGAAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTGCAGGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: PTHPRNISIWVSSVT*KRVSSGSSRSLQVI Trigger: TATGACCTGCAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000656049.1 ENST00000668023.1 |
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| CDS CAA 90 bp | CCTACCCACCCCAGGAATATCTCCATATGGGTTTCATCCGTCACTTaGAAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTGCAGGTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PTHPRNISIWVSSVT*KRVSSGSSRSLQVL Trigger: TAAGACCTGCAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654932.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000666689.1 |
||
| CDS CAA 90 bp | TCTCTCTTAAAATGTGGGACCAAGGATGGAGTGATGTCTGCCGCTTaGCCGTGGTCATGTGGTGGTGTGTCTGGCCCACTGATCAAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SLLKCGTKDGVMSAA*PWSCGGVSGPLIKY Trigger: ATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAGCGGCAGACATCACTCCATCCTTGGTCCCACATTTTAAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670808.1 |
||
| CDS CAA 90 bp | TGGGTGAACATGACCAAGAAGAATTTCTGCTCACTCAGCTCATCTTaGGTCCTCAGACACCTGGATCCAAGACCTTCTCATGGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WVNMTKKNFCSLSSS*VLRHLDPRPSHGPW Trigger: CCAGGGCCCATGAGAAGGTCTTGGATCCAGGTGTCTGAGGACCAAAGATGAGCTGAGTGAGCAGAAATTCTTCTTGGTCATGTTCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
||
| CDS TCA 72 bp | CTTTGCCGTGGTCATGTGGTGGTGTGTCTGGCCCACTaGTCAAGTATCTGTCCACCCAACTATGATGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCRGHVVVCLAH*SSICPPNYDDF Trigger: GAAGTCATCATAGTTGGGTGGACAGATACTTGATCAGTGGGCCAGACACACCACCACATGACCACGGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
||
| CDS CCA 72 bp | AATAAGTCTGAGTTGTGGCTCAAGGCTGCTCCAACTTaGTCACAATTGGAGTCCTCCTGTCCTGTAAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NKSELWLKAAPT*SQLESSCPVRG Trigger: GCCCCTTACAGGACAGGAGGACTCCAATTGTGACCAAGTTGGAGCAGCCTTGAGCCACAACTCAGACTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS CCA 72 bp | TTGAAGGATACTTGTGAAGGTGGAACCACCGTGGCTTaGAAGCTTCGCAGATGTCGCTGTCTCCAAGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LKDTCEGGTTVA*KLRRCRCLQGS Trigger: TGATCCTTGGAGACAGCGACATCTGCGAAGCTTCCAAGCCACGGTGGTTCCACCTTCACAAGTATCCTTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
||
| CDS CAA 72 bp | GGAGAGAAGGTTGAGGAGGAGAGGGACATCTGTGCTTaGGAAGCATCATCCACTGTTCATCTCTTGGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: GEKVEEERDICA*EASSTVHLLET Trigger: CGTCTCCAAGAGATGAACAGTGGATGATGCTTCCAAAGCACAGATGTCCCTCTCCTCCTCAACCTTCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000508201.5 ENST00000514474.1 ENST00000656591.1 ENST00000657166.1 ENST00000659550.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS CAA 90 bp | TGTGTCTATGCTTCTCTGCCAGGCAGCAAACCCTGCAATTTGCTTTaGAATCCTACAACGGAGTACTTGGATGGATGGGGTGGTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CVYASLPGSKPCNLL*NPTTEYLDGWGGCR Trigger: CCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGGTTTGCTGCCTGGCAGAGAAGCATAGACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS TCA 72 bp | CCAGGAATATCTCCATATGGGTTTCATCCGTCACTTTaGAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGISPYGFHPSL*SESVLVAAGHC Trigger: GCAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS GCA 72 bp | CGAGTAGGTTGTGACTGCTCAGTCTTCTGCCAAAGCTaGTCCACGTTTCAGGCACATAACTACACCCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RVGCDCSVFCQS*STFQAHNYTLF Trigger: AAAGAGGGTGTAGTTATGTGCCTGAAACGTGGAGCAGCTTTGGCAGAAGACTGAGCAGTCACAACCTACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CCA 72 bp | TCCAACTGGCCTACCCACCCCAGGAATATCTCCATATaGGTTTCATCCGTCACTTTGAAGCGAGTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SNWPTHPRNISI*VSSVTLKRVSS Trigger: AGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CCA 72 bp | AGTCCTCTCTCAGGTGTAAACACTCTGTCTTCCAACTaGCCTACCCACCCCAGGAATATCTCCATATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SPLSGVNTLSSN*PTHPRNISIWV Trigger: AACCCATATGGAGATATTCCTGGGGTGGGTAGGCCAGTTGGAAGACAGAGTGTTTACACCTGAGAGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CCA 72 bp | GTTTGTAGAGATAGCGTTTTGTCATGTTGCTCACGGTaGTCTCAAACTCTGAGTTCAAGCCGTCCACCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VCRDSVLSCCSR*SQTLSSSRPPT Trigger: GGTGGGTGGACGGCTTGAACTCAGAGTTTGAGACCACCGTGAGCAACATGACAAAACGCTATCTCTACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000654932.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000670808.1 |
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| CDS CCA 72 bp | GAATTCTGCGGTGGACGGGGGTTTCTTTGCCTCTGGTaGAATTCCTTTCCCTCTGAAATGCCCTTATTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EFCGGRGFLCLW*NSFPSEMPLFS Trigger: TGAGAATAAGGGCATTTCAGAGGGAAAGGAATTCCACCAGAGGCAAAGAAACCCCCGTCCACCGCAGAATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660582.1 |
||
| CDS CAA 72 bp | CCCAGGAATATCTCCATATGGGTTTCATCCGTCACTTaGAAGCGAGTCAGTTCTGGTAGCAGCAGGTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PRNISIWVSSVT*KRVSSGSSRSL Trigger: CAGTGACCTGCTGCTACCAGAACTGACTCGCTTCAAAGTGACGGATGAAACCCATATGGAGATATTCCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000507599.2 ENST00000508201.5 ENST00000509382.5 ENST00000654932.1 ENST00000656049.1 ENST00000656591.1 ENST00000657166.1 ENST00000658399.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS GCA 72 bp | AATCCTACAACGGAGTACTTGGATGGATGGGGTGGTTaGAGGATGCCTTTGAAGGATACTTGTGAAGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NPTTEYLDGWGG*RMPLKDTCEGG Trigger: TCCACCTTCACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CAA 90 bp | GGCAGCAAACCCTGCAATTTGCTTTTGAATCCTACAACGGAGTACTaGGATGGATGGGGTGGTTGCAGGATGCCTTTGAAGGATACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GSKPCNLLLNPTTEY*DGWGGCRMPLKDTC Trigger: ACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGGTTTGCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CAA 90 bp | ATGCTTTGTGTCTATGCTTCTCTGCCAGGCAGCAAACCCTGCAATTaGCTTTTGAATCCTACAACGGAGTACTTGGATGGATGGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: MLCVYASLPGSKPCN*LLNPTTEYLDGWGG Trigger: ACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGGTTTGCTGCCTGGCAGAGAAGCATAGACACAAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS TCA 72 bp | TCCATGATGGCTTTCACAGATAGACATAGGAGATATTaGGCTCGAATTCTGCGGTGGACGGGGGTTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMMAFTDRHRRY*ARILRWTGVSL Trigger: CAAAGAAACCCCCGTCCACCGCAGAATTCGAGCTCAATATCTCCTATGTCTATCTGTGAAAGCCATCATGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660582.1 |
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| CDS CAA 72 bp | GTCTATGCTTCTCTGCCAGGCAGCAAACCCTGCAATTaGCTTTTGAATCCTACAACGGAGTACTTGGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: VYASLPGSKPCN*LLNPTTEYLDG Trigger: TCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTGCAGGGTTTGCTGCCTGGCAGAGAAGCATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CAA 72 bp | ACAATACAAACCATTGTGTACCACCCCCTCCTGCCCTaGAGTTCCATGATGGCTTTCACAGATAGACATAGG | + |
|
Preference number: 6 (lower is better) Translates to: TIQTIVYHPLLP*SSMMAFTDRHR Trigger: CCTATGTCTATCTGTGAAAGCCATCATGGAACTCAAGGGCAGGAGGGGGTGGTACACAATGGTTTGTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660582.1 |
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| CDS CCA 72 bp | CCCCTTTTTATTACTCTCATATCCTCAGCAAAGGCTTaGTGTGAAATCCGGAACTGGGTGCAGGTATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLFITLISSAKA*CEIRNWVQVSS Trigger: TGAAGATACCTGCACCCAGTTCCGGATTTCACACCAAGCCTTTGCTGAGGATATGAGAGTAATAAAAAGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 72 bp | TTGCTTTTGAATCCTACAACGGAGTACTTGGATGGATaGGGTGGTTGCAGGATGCCTTTGAAGGATACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLLNPTTEYLDG*GGCRMPLKDTC Trigger: ACAAGTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 72 bp | CAATTTGCTTTTGAATCCTACAACGGAGTACTTGGATaGATGGGGTGGTTGCAGGATGCCTTTGAAGGATAC | + |
|
Preference number: 6 (lower is better) Translates to: QFAFESYNGVLG*MGWLQDAFEGY Trigger: GTATCCTTCAAAGGCATCCTGCAACCACCCCATCCATCCAAGTACTCCGTTGTAGGATTCAAAAGCAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CCA 72 bp | CAACTTTCTCTCCTTCTCCACCCAATTTTAGCCTTTTaGGCTTCTGTGTACACATACACTGCCTTCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLSLLLHPILAF*ASVYTYTAFTA Trigger: TGCTGTGAAGGCAGTGTATGTGTACACAGAAGCCCAAAAGGCTAAAATTGGGTGGAGAAGGAGAGAAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670808.1 |
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| CDS CAA 72 bp | TTGTCTGAGCAAGACTTTCTTGTAGGCAAGGAATCTTaGGCTACACTGAGCAGTGCCAAGAACAGTCAACAA | + |
|
Preference number: 6 (lower is better) Translates to: LSEQDFLVGKES*ATLSSAKNSQQ Trigger: TTGTTGACTGTTCTTGGCACTGCTCAGTGTAGCCAAAGATTCCTTGCCTACAAGAAAGTCTTGCTCAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
||
| CDS TCA 72 bp | TTTTATTACTCTCATATCCTCAGCAAAGGCTTGGTGTaGAATCCGGAACTGGGTGCAGGTATCTTCATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FYYSHILSKGLV*NPELGAGIFIA Trigger: TGCTATGAAGATACCTGCACCCAGTTCCGGATTTCACACCAAGCCTTTGCTGAGGATATGAGAGTAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
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| CDS CAA 90 bp | ATCATCCACTGTTCATCTCTTGGAGACGCTGTGATAGTGAGTAACTaGTTATCACAGTTGTCATCGACTTCATTGGGCAATCTGTTAACT | + |
|
Preference number: 6 (lower is better) Translates to: IIHCSSLGDAVIVSN*LSQLSSTSLGNLLT Trigger: AGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGCGTCTCCAAGAGATGAACAGTGGATGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000508201.5 ENST00000514474.1 ENST00000656591.1 ENST00000657166.1 ENST00000659550.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CAA 72 bp | GGAGACGCTGTGATAGTGAGTAACTTGTTATCACAGTaGTCATCGACTTCATTGGGCAATCTGTTAACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GDAVIVSNLLSQ*SSTSLGNLLTN Trigger: ATTAGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGCGTCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000508201.5 ENST00000514474.1 ENST00000656591.1 ENST00000657166.1 ENST00000659550.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CAA 90 bp | GCTGTGATAGTGAGTAACTTGTTATCACAGTTGTCATCGACTTCATaGGGCAATCTGTTAACTAATGGTATTTCAACTGCTTTTCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVIVSNLLSQLSSTS*GNLLTNGISTAFHC Trigger: GCAGTGAAAAGCAGTTGAAATACCATTAGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000508201.5 ENST00000514474.1 ENST00000660582.1 ENST00000668023.1 |
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| CDS CAA 90 bp | TCATCTCTTGGAGACGCTGTGATAGTGAGTAACTTGTTATCACAGTaGTCATCGACTTCATTGGGCAATCTGTTAACTAATGGTATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLGDAVIVSNLLSQ*SSTSLGNLLTNGIS Trigger: TGAAATACCATTAGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGCGTCTCCAAGAGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000508201.5 ENST00000514474.1 ENST00000656591.1 ENST00000657166.1 ENST00000659550.1 ENST00000660582.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS CAA 90 bp | GACTTAGCTCTAACAGGACACAAAACTGTCATCTCTACCCAGCACTaGCTATGTCTACTCATAGTCCTATTGTTTAAGTTTATTGCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: DLALTGHKTVISTQH*LCLLIVLLFKFIAY Trigger: ATAGGCAATAAACTTAAACAATAGGACTATGAGTAGACATAGCAAGTGCTGGGTAGAGATGACAGTTTTGTGTCCTGTTAGAGCTAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
||
| CDS CAA 72 bp | CTAACAGGACACAAAACTGTCATCTCTACCCAGCACTaGCTATGTCTACTCATAGTCCTATTGTTTAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTGHKTVISTQH*LCLLIVLLFKF Trigger: AAACTTAAACAATAGGACTATGAGTAGACATAGCAAGTGCTGGGTAGAGATGACAGTTTTGTGTCCTGTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000508201.5 ENST00000660582.1 |
||
| CDS CAA 90 bp | GCTGTGATAGTGAGTAACTTGTTATCACAGTTGTCATCGACTTCATaGGGCAATCTGTTAACTAATGGTATTTCAACTGCTTTTCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AVIVSNLLSQLSSTS*GNLLTNGISTAFPQ Trigger: TTGAGGAAAAGCAGTTGAAATACCATTAGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000656591.1 ENST00000662011.1 ENST00000666689.1 |
||
| CDS TCA 72 bp | ATGTTTCCTCCTCAGGGTGTCATAACTGTAGGCAGATaGTATCAGTTTGTCCTATTATTGAGGATATTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: MFPPQGVITVGR*YQFVLLLRILS Trigger: ACTTAATATCCTCAATAATAGGACAAACTGATATCATCTGCCTACAGTTATGACACCCTGAGGAGGAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656049.1 ENST00000658399.1 |
||
| CDS TCA 72 bp | ATGTTCCTCAATTTGGGTTTGTTGCATGTTTCCTCCTaGTTGAATTCAGGTTATGAGGTCATGCTTTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MFLNLGLLHVSS*LNSGYEVMLFF Trigger: AAAGAAAAGCATGACCTCATAACCTGAATTCAATCAGGAGGAAACATGCAACAAACCCAAATTGAGGAACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656049.1 ENST00000658399.1 |
||
| CDS CAA 72 bp | TTCACAGCACTCTTAAATGACTACATCCCATTGTGTTaGGCTACATGTGAAGATCATGGTAGATTTCAGATT | + |
|
Preference number: 6 (lower is better) Translates to: FTALLNDYIPLC*ATCEDHGRFQI Trigger: AATCTGAAATCTACCATGATCTTCACATGTAGCCAAACACAATGGGATGTAGTCATTTAAGAGTGCTGTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000508201.5 ENST00000509382.5 ENST00000514474.1 ENST00000660582.1 ENST00000668023.1 ENST00000670808.1 |
||
| CDS CAA 90 bp | GCTGTGATAGTGAGTAACTTGTTATCACAGTTGTCATCGACTTCATaGGGCAATCTGTTAACTAATGGTATTTCAACTGCTTTTCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVIVSNLLSQLSSTS*GNLLTNGISTAFHS Trigger: TGAATGAAAAGCAGTTGAAATACCATTAGTTAACAGATTGCCCAATGAAGTCGATGACAACTGTGATAACAAGTTACTCACTATCACAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670808.1 |
||
| CDS CAA 90 bp | CATTGTGTTTGGCTACATGTGAAGATCATGGTAGATTTCAGATTCTaGAAGATGAAGGATCTTCAATTCTCTAAAACAGCAATCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: HCVWLHVKIMVDFRF*KMKDLQFSKTAILK Trigger: CTTGAGGATTGCTGTTTTAGAGAATTGAAGATCCTTCATCTTCAAGAATCTGAAATCTACCATGATCTTCACATGTAGCCAAACACAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668023.1 |
||
| CDS CAA 72 bp | TGGCTACATGTGAAGATCATGGTAGATTTCAGATTCTaGAAGATGAAGGATCTTCAATTCTCTAAAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: WLHVKIMVDFRF*KMKDLQFSKTA Trigger: TGCTGTTTTAGAGAATTGAAGATCCTTCATCTTCAAGAATCTGAAATCTACCATGATCTTCACATGTAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000508201.5 ENST00000509382.5 ENST00000514474.1 ENST00000660582.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS CAA 72 bp | CAGAAAATTGTTGAATTGCCCTTAATATTTCATCTATaGCAATGCCACACCAGGTATCTTCATAGCACAATC | + |
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Preference number: 6 (lower is better) Translates to: QKIVELPLIFHL*QCHTRYLHSTI Trigger: GATTGTGCTATGAAGATACCTGGTGTGGCATTGCAATAGATGAAATATTAAGGGCAATTCAACAATTTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000514474.1 ENST00000656591.1 ENST00000657166.1 ENST00000659550.1 ENST00000662011.1 ENST00000666520.1 ENST00000666689.1 ENST00000668023.1 ENST00000670808.1 |
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| CDS TCA 72 bp | TATCTGTCTGGGTTGCCATTCATTTTAATTCTAAAATaGGGCCTTCTAGCTCTAAAGGTAACAATTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: YLSGLPFILILK*GLLALKVTIVS Trigger: AGATACAATTGTTACCTTTAGAGCTAGAAGGCCTCATTTTAGAATTAAAATGAATGGCAACCCAGACAGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000514474.1 ENST00000657166.1 ENST00000659550.1 ENST00000662011.1 ENST00000666520.1 ENST00000668023.1 |
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