Pregenerated sensors for LINC01014 (Homo sapiens)
Ensembl gene IDs: ENSG00000223941Ensembl transcript IDs: ENST00000436432.1, ENST00000441018.1, ENST00000455307.5
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATTCGGTTGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCTGGCAGGAGACAAGTC | + |
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Preference number: 5 (lower is better) Translates to: IRLWSELSIGAGNKQ*LQHLSDTIPGRRQV Trigger: GACTTGTCTCCTGCCAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436432.1 |
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| CDS GCA 90 bp | ATTCGGTTGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCAGGTCTGCATATCAGC | + |
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Preference number: 5 (lower is better) Translates to: IRLWSELSIGAGNKQ*LQHLSDTIPGLHIS Trigger: GCTGATATGCAGACCTGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455307.5 |
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| CDS TCA 90 bp | ACGTGGTCAAGTGATAAATGGCAGGCTCTGGATTCGGTTGTGGTCTaGGCTCAGCATTGGGGCAGGAAACAAACAGTGCCTTCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: TWSSDKWQALDSVVV*AQHWGRKQTVPSAL Trigger: AAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS TCA 90 bp | AGAACCAGTGGCAGGAGAAGGAAACTGTCAGTTTTCACACCTCAGTaGAGGCTGTGCGAGGGTCTTGCAGGTTCAGATGTACGTGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: RTSGRRRKLSVFTPQ*RLCEGLAGSDVRGQ Trigger: TTGACCACGTACATCTGAACCTGCAAGACCCTCGCACAGCCTTCACTGAGGTGTGAAAACTGACAGTTTCCTTCTCCTGCCACTGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS GCA 90 bp | ATTCGGTTGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCTCAGTATGTCTGTGTG | + |
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Preference number: 5 (lower is better) Translates to: IRLWSELSIGAGNKQ*LQHLSDTIPQYVCV Trigger: CACACAGACATACTGAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441018.1 |
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| CDS CCA 90 bp | GATGTACGTGGTCAAGTGATAAATGGCAGGCTCTGGATTCGGTTGTaGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTGCCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DVRGQVINGRLWIRL*SELSIGAGNKQCLQ Trigger: CTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGTACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS GCA 90 bp | GAAACTGTCAGTTTTCACACCTCAGTGAAGGCTGTGCGAGGGTCTTaGAGGTTCAGATGTACGTGGTCAAGTGATAAATGGCAGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ETVSFHTSVKAVRGS*RFRCTWSSDKWQAL Trigger: CAGAGCCTGCCATTTATCACTTGACCACGTACATCTGAACCTGCAAGACCCTCGCACAGCCTTCACTGAGGTGTGAAAACTGACAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CCA 90 bp | CTTGCAGGTTCAGATGTACGTGGTCAAGTGATAAATGGCAGGCTCTaGATTCGGTTGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAA | + |
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Preference number: 5 (lower is better) Translates to: LAGSDVRGQVINGRL*IRLWSELSIGAGNK Trigger: TTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGTACATCTGAACCTGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CCA 90 bp | TTTCTTTTTCCAGGTTGTAGGGAGGCTTCTGTGCTGACTATCTTCTaGCTTATTCATGAAAATGTCGTAAGCAGAGGAACGAGAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: FLFPGCREASVLTIF*LIHENVVSRGTRGS Trigger: ACTGCCTCTCGTTCCTCTGCTTACGACATTTTCATGAATAAGCCAGAAGATAGTCAGCACAGAAGCCTCCCTACAACCTGGAAAAAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000436432.1 ENST00000455307.5 |
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| CDS CCA 90 bp | CTGCATATCAGCTTAATATGTCCACCACATGCACTCTCTCTTTCATaGCCTCCCTTATGGACTGTGATTCCATTTGTGTTGTATGATTTT | + |
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Preference number: 5 (lower is better) Translates to: LHISLICPPHALSLS*PPLWTVIPFVLYDF Trigger: AAAATCATACAACACAAATGGAATCACAGTCCATAAGGGAGGCCATGAAAGAGAGAGTGCATGTGGTGGACATATTAAGCTGATATGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436432.1 ENST00000455307.5 |
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| CDS CCA 90 bp | TTAATATGTCCACCACATGCACTCTCTCTTTCATGGCCTCCCTTATaGACTGTGATTCCATTTGTGTTGTATGATTTTGCAATTGTGATT | + |
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Preference number: 5 (lower is better) Translates to: LICPPHALSLSWPPL*TVIPFVLYDFAIVI Trigger: AATCACAATTGCAAAATCATACAACACAAATGGAATCACAGTCCATAAGGGAGGCCATGAAAGAGAGAGTGCATGTGGTGGACATATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000436432.1 ENST00000455307.5 |
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| CDS GCA 72 bp | TGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: WSELSIGAGNKQ*LQHLSDTIPGR Trigger: CCTGCCAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436432.1 |
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| CDS GCA 72 bp | TGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: WSELSIGAGNKQ*LQHLSDTIPGL Trigger: CAGACCTGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000455307.5 |
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| CDS CAA 90 bp | TCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTGCCTTCAGCACTaGTCTGACACCATCCCTGGCAGGAGACAAGTCCAGAAAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SELSIGAGNKQCLQH*SDTIPGRRQVQKEQ Trigger: CTGCTCTTTCTGGACTTGTCTCCTGCCAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000436432.1 |
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| CDS TCA 72 bp | GGCAGGAGAAGGAAACTGTCAGTTTTCACACCTCAGTaGAGGCTGTGCGAGGGTCTTGCAGGTTCAGATGTA | + |
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Preference number: 6 (lower is better) Translates to: GRRRKLSVFTPQ*RLCEGLAGSDV Trigger: TACATCTGAACCTGCAAGACCCTCGCACAGCCTTCACTGAGGTGTGAAAACTGACAGTTTCCTTCTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS GCA 72 bp | TGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTaGCTTCAGCACTTGTCTGACACCATCCCTCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: WSELSIGAGNKQ*LQHLSDTIPQY Trigger: ATACTGAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441018.1 |
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| CDS CCA 72 bp | TCAGATGTACGTGGTCAAGTGATAAATGGCAGGCTCTaGATTCGGTTGTGGTCTGAGCTCAGCATTGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SDVRGQVINGRL*IRLWSELSIGA Trigger: TGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGTACATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CCA 72 bp | AAGGCTGTGCGAGGGTCTTGCAGGTTCAGATGTACGTaGTCAAGTGATAAATGGCAGGCTCTGGATTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: KAVRGSCRFRCT*SSDKWQALDSV Trigger: AACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGTACATCTGAACCTGCAAGACCCTCGCACAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CAA 72 bp | CGTGGTCAAGTGATAAATGGCAGGCTCTGGATTCGGTaGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: RGQVINGRLWIR*WSELSIGAGNK Trigger: TTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CAA 90 bp | TCAGATGTACGTGGTCAAGTGATAAATGGCAGGCTCTGGATTCGGTaGTGGTCTGAGCTCAGCATTGGGGCAGGAAACAAACAGTGCCTT | + |
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Preference number: 6 (lower is better) Translates to: SDVRGQVINGRLWIR*WSELSIGAGNKQCL Trigger: AAGGCACTGTTTGTTTCCTGCCCCAATGCTGAGCTCAGACCACAACCGAATCCAGAGCCTGCCATTTATCACTTGACCACGTACATCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS GCA 72 bp | AGTTTTCACACCTCAGTGAAGGCTGTGCGAGGGTCTTaGAGGTTCAGATGTACGTGGTCAAGTGATAAATGG | + |
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Preference number: 6 (lower is better) Translates to: SFHTSVKAVRGS*RFRCTWSSDKW Trigger: CCATTTATCACTTGACCACGTACATCTGAACCTGCAAGACCCTCGCACAGCCTTCACTGAGGTGTGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CAA 72 bp | AGCATTGGGGCAGGAAACAAACAGTGCCTTCAGCACTaGTCTGACACCATCCCTCAGTATGTCTGTGTGATA | + |
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Preference number: 6 (lower is better) Translates to: SIGAGNKQCLQH*SDTIPQYVCVI Trigger: TATCACACAGACATACTGAGGGATGGTGTCAGACAAGTGCTGAAGGCACTGTTTGTTTCCTGCCCCAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000441018.1 |
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| CDS CCA 72 bp | CCAGGTTGTAGGGAGGCTTCTGTGCTGACTATCTTCTaGCTTATTCATGAAAATGTCGTAAGCAGAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: PGCREASVLTIF*LIHENVVSRGT Trigger: CGTTCCTCTGCTTACGACATTTTCATGAATAAGCCAGAAGATAGTCAGCACAGAAGCCTCCCTACAACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000436432.1 ENST00000441018.1 ENST00000455307.5 |
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| CDS CCA 72 bp | AGCTTAATATGTCCACCACATGCACTCTCTCTTTCATaGCCTCCCTTATGGACTGTGATTCCATTTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: SLICPPHALSLS*PPLWTVIPFVL Trigger: CAACACAAATGGAATCACAGTCCATAAGGGAGGCCATGAAAGAGAGAGTGCATGTGGTGGACATATTAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000436432.1 ENST00000455307.5 |
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