Pregenerated sensors for LINC01010 (Homo sapiens)
Ensembl gene IDs: ENSG00000236700Ensembl transcript IDs: ENST00000431422.2, ENST00000440090.5, ENST00000456749.1, ENST00000653261.1, ENST00000655247.1, ENST00000655975.1, ENST00000656596.1, ENST00000656789.1, ENST00000658387.1, ENST00000660399.1, ENST00000661139.1, ENST00000664108.1, ENST00000666623.1, ENST00000667755.1, ENST00000669104.1, ENST00000669308.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | CCCAACACCCCACGTGCAGGACCACACCTCCACCTTTGCCCCTGCTaGACTTTGACTTCTGGGCACACCCGGAGCAGCCAGACAGCTTGC | + |
Preference number: 5 (lower is better) Translates to: PNTPRAGPHLHLCPC*TLTSGHTRSSQTAC Trigger: GCAAGCTGTCTGGCTGCTCCGGGTGTGCCCAGAAGTCAAAGTCCAGCAGGGGCAAAGGTGGAGGTGTGGTCCTGCACGTGGGGTGTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 90 bp | CAGGCACGAGTCACCAGAAGAGGGAGGCTCTTGGTGGGGCACTCTTaGTGGTCCGAGGACTCAATCAGGGTCCTAGAGGGTGAGCCCATC | + |
Preference number: 5 (lower is better) Translates to: QARVTRRGRLLVGHS*WSEDSIRVLEGEPI Trigger: GATGGGCTCACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAAGAGTGCCCCACCAAGAGCCTCCCTCTTCTGGTGACTCGTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 90 bp | CTCTGGGCTCTCCCGCTGTGTCACAGTGTGAGGCGTGTGCACCACTaGACTCCAGCCTTTCTCTCCCAGCTCGTCTTCCTCCATAGTCTG | + |
Preference number: 5 (lower is better) Translates to: LWALPLCHSVRRVHH*TPAFLSQLVFLHSL Trigger: CAGACTATGGAGGAAGACGAGCTGGGAGAGAAAGGCTGGAGTGCAGTGGTGCACACGCCTCACACTGTGACACAGCGGGAGAGCCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660399.1 |
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CDS CCA 90 bp | GCACGAGTCACCAGAAGAGGGAGGCTCTTGGTGGGGCACTCTTGGTaGTCCGAGGACTCAATCAGGGTCCTAGAGGGTGAGCCCATCTTA | + |
Preference number: 5 (lower is better) Translates to: ARVTRRGRLLVGHSW*SEDSIRVLEGEPIL Trigger: TAAGATGGGCTCACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAAGAGTGCCCCACCAAGAGCCTCCCTCTTCTGGTGACTCGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 90 bp | AGGGTCCTAGAGGGTGAGCCCATCTTAACCAGAGATGGCAGAACTTaGCCCAAGAAGGCCTTGTGGTCATCGGGGCTGTACGCAGCACAC | + |
Preference number: 5 (lower is better) Translates to: RVLEGEPILTRDGRT*PKKALWSSGLYAAH Trigger: GTGTGCTGCGTACAGCCCCGATGACCACAAGGCCTTCTTGGGTCAAGTTCTGCCATCTCTGGTTAAGATGGGCTCACCCTCTAGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 90 bp | GGGGCACTCTTGGTGGTCCGAGGACTCAATCAGGGTCCTAGAGGGTaGGCCCATCTTAACCAGAGATGGCAGAACTTGACCCAAGAAGGC | + |
Preference number: 5 (lower is better) Translates to: GALLVVRGLNQGPRG*AHLNQRWQNLTQEG Trigger: GCCTTCTTGGGTCAAGTTCTGCCATCTCTGGTTAAGATGGGCTCACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAAGAGTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 90 bp | GACATAGGACAAAGGCTTGGAAAGGTCAGACTTGAGCAGGAAGAGTaGAGTCATTCCAACAGCTGTCGCTCTGGGCTCTCCCGCTGTGTC | + |
Preference number: 5 (lower is better) Translates to: DIGQRLGKVRLEQEE*SHSNSCRSGLSRCV Trigger: GACACAGCGGGAGAGCCCAGAGCGACAGCTGTTGGAATGACTGCACTCTTCCTGCTCAAGTCTGACCTTTCCAAGCCTTTGTCCTATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431422.2 ENST00000660399.1 |
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CDS GCA 90 bp | GGCCACACGGCCAAGCTGGCAGGTTCCCCGAAGCCAGTCTATTCATaGCCATTCCTCAAGTTTGCTGTAGCTATTTGTGTGCTCCAGCTT | + |
Preference number: 5 (lower is better) Translates to: GHTAKLAGSPKPVYS*PFLKFAVAICVLQL Trigger: AAGCTGGAGCACACAAATAGCTACAGCAAACTTGAGGAATGGGCATGAATAGACTGGCTTCGGGGAACCTGCCAGCTTGGCCGTGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 90 bp | GGCAGGTTCCCCGAAGCCAGTCTATTCATGCCCATTCCTCAAGTTTaGTGTAGCTATTTGTGTGCTCCAGCTTCCAAGAAGTCTCCAGAC | + |
Preference number: 5 (lower is better) Translates to: GRFPEASLFMPIPQV*CSYLCAPASKKSPD Trigger: GTCTGGAGACTTCTTGGAAGCTGGAGCACACAAATAGCTACAGCAAACTTGAGGAATGGGCATGAATAGACTGGCTTCGGGGAACCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 90 bp | TCCAGACATAGGACAAAGGCTTGTGTAGAGTCCAGAGGATGGCTTTaGTGCTCTTTCTGCTACAGGCTGGTTTGGGTGCCTGAGTTAGAA | + |
Preference number: 5 (lower is better) Translates to: SRHRTKACVESRGWL*CSFCYRLVWVPELE Trigger: TTCTAACTCAGGCACCCAAACCAGCCTGTAGCAGAAAGAGCATCAAAGCCATCCTCTGGACTCTACACAAGCCTTTGTCCTATGTCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440090.5 |
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CDS CCA 90 bp | AGTCAGGAACAGGAGGTTATGACTTCCTGGGCCACTTCTTCTCTCTaGTCTCACTCTATCTGGTTAGCTTCATCCAGTAAGCCCTTTGGT | + |
Preference number: 5 (lower is better) Translates to: SQEQEVMTSWATSSL*SHSIWLASSSKPFG Trigger: ACCAAAGGGCTTACTGGATGAAGCTAACCAGATAGAGTGAGACCAGAGAGAAGAAGTGGCCCAGGAAGTCATAACCTCCTGTTCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655975.1 ENST00000656596.1 |
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CDS CCA 90 bp | GTTATGACTTCCTGGGCCACTTCTTCTCTCTGGTCTCACTCTATCTaGTTAGCTTCATCCAGTAAGCCCTTTGGTCAGTTTGTTCCCATT | + |
Preference number: 5 (lower is better) Translates to: VMTSWATSSLWSHSI*LASSSKPFGQFVPI Trigger: AATGGGAACAAACTGACCAAAGGGCTTACTGGATGAAGCTAACCAGATAGAGTGAGACCAGAGAGAAGAAGTGGCCCAGGAAGTCATAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655975.1 ENST00000656596.1 |
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CDS TCA 90 bp | AGGATGGCTTTGATGCTCTTTCTGCTACAGGCTGGTTTGGGTGCCTaGGTTAGAAGTGTTAAAAGGGCACAGAAAACAGATCTCCTGATT | + |
Preference number: 5 (lower is better) Translates to: RMALMLFLLQAGLGA*VRSVKRAQKTDLLI Trigger: AATCAGGAGATCTGTTTTCTGTGCCCTTTTAACACTTCTAACTCAGGCACCCAAACCAGCCTGTAGCAGAAAGAGCATCAAAGCCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440090.5 |
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CDS TCA 90 bp | CTCTTCAAAGTAAGGACCATACTATGGCATCTTCTTGAGGAAGCTTaGTTAAATCCAGCAAAGTGCCCTGCAGTTAACTGTCTTCTGCTT | + |
Preference number: 5 (lower is better) Translates to: LFKVRTILWHLLEEA*LNPAKCPAVNCLLL Trigger: AAGCAGAAGACAGTTAACTGCAGGGCACTTTGCTGGATTTAATCAAGCTTCCTCAAGAAGATGCCATAGTATGGTCCTTACTTTGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664108.1 |
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CDS TCA 90 bp | GTTAGACACTCATTAGGTTTTGACAGTATTATAGCGACAGCGGCTTaGTTCTTCCTTTCTAATCCTGCTAGGGTGATCTTCCCAAAACAC | + |
Preference number: 5 (lower is better) Translates to: VRHSLGFDSIIATAA*FFLSNPARVIFPKH Trigger: GTGTTTTGGGAAGATCACCCTAGCAGGATTAGAAAGGAAGAATCAAGCCGCTGTCGCTATAATACTGTCAAAACCTAATGAGTGTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666623.1 |
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CDS TCA 90 bp | TCTCCAGACATAGGACAAAGGCTAGGTTTTGGTCCTGCTGTATCCTaGCATATCTTTTCTAATGTTCCTTGTATGATTCTGATGAGTAAC | + |
Preference number: 5 (lower is better) Translates to: SPDIGQRLGFGPAVS*HIFSNVPCMILMSN Trigger: GTTACTCATCAGAATCATACAAGGAACATTAGAAAAGATATGTCAGGATACAGCAGGACCAAAACCTAGCCTTTGTCCTATGTCTGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669308.1 |
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CDS GCA 90 bp | TGTGTGGAACTGGAAATTGATCTGCATTCATTTTTCAGACACCTCTaGATATATAACAGTGTTGGTACAGAAAGTCCAAGTCAGGAACAG | + |
Preference number: 5 (lower is better) Translates to: CVELEIDLHSFFRHL*IYNSVGTESPSQEQ Trigger: CTGTTCCTGACTTGGACTTTCTGTACCAACACTGTTATATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAATTTCCAGTTCCACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661139.1 |
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CDS GCA 90 bp | GGTCATATTTTACAGATGTGCTCTGTGTGGAACTGGAAATTGATCTaGATTCATTTTTCAGACACCTCTGCATATATAACAGTGTTGGTA | + |
Preference number: 5 (lower is better) Translates to: GHILQMCSVWNWKLI*IHFSDTSAYITVLV Trigger: TACCAACACTGTTATATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAATTTCCAGTTCCACACAGAGCACATCTGTAAAATATGACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456749.1 ENST00000661139.1 |
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CDS CCA 90 bp | TGTTCTAATTTACTAAGAAGAGTCACCAATTTTGTTTCTGTGGTTTaGTATGAAATAAGGTGGCAGAAACAGCACTCTCCAAATATCCAT | + |
Preference number: 5 (lower is better) Translates to: CSNLLRRVTNFVSVV*YEIRWQKQHSPNIH Trigger: ATGGATATTTGGAGAGTGCTGTTTCTGCCACCTTATTTCATACCAAACCACAGAAACAAAATTGGTGACTCTTCTTAGTAAATTAGAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655975.1 |
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CDS GCA 72 bp | CCCAACACCCCACGTGCAGGACCACACCTCCACCTTTaGCCCTGCTGGACTTTGACTTCTGGGCACACCCGG | + |
Preference number: 6 (lower is better) Translates to: PNTPRAGPHLHL*PCWTLTSGHTR Trigger: CCGGGTGTGCCCAGAAGTCAAAGTCCAGCAGGGGCAAAGGTGGAGGTGTGGTCCTGCACGTGGGGTGTTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 72 bp | CCACGTGCAGGACCACACCTCCACCTTTGCCCCTGCTaGACTTTGACTTCTGGGCACACCCGGAGCAGCCAG | + |
Preference number: 6 (lower is better) Translates to: PRAGPHLHLCPC*TLTSGHTRSSQ Trigger: CTGGCTGCTCCGGGTGTGCCCAGAAGTCAAAGTCCAGCAGGGGCAAAGGTGGAGGTGTGGTCCTGCACGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CAA 90 bp | ACCCCACGTGCAGGACCACACCTCCACCTTTGCCCCTGCTGGACTTaGACTTCTGGGCACACCCGGAGCAGCCAGACAGCTTGCAGTCTG | + |
Preference number: 6 (lower is better) Translates to: TPRAGPHLHLCPCWT*TSGHTRSSQTACSL Trigger: CAGACTGCAAGCTGTCTGGCTGCTCCGGGTGTGCCCAGAAGTCAAAGTCCAGCAGGGGCAAAGGTGGAGGTGTGGTCCTGCACGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 72 bp | CTCCCGCTGTGTCACAGTGTGAGGCGTGTGCACCACTaGACTCCAGCCTTTCTCTCCCAGCTCGTCTTCCTC | + |
Preference number: 6 (lower is better) Translates to: LPLCHSVRRVHH*TPAFLSQLVFL Trigger: GAGGAAGACGAGCTGGGAGAGAAAGGCTGGAGTGCAGTGGTGCACACGCCTCACACTGTGACACAGCGGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660399.1 |
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CDS CCA 72 bp | CTGAGCTCTAGCTCTGCCTTGGCTTGCCTATTACCTTaGCCACACGGCCAAGCTGGCAGGTTCCCCGAAGCC | + |
Preference number: 6 (lower is better) Translates to: LSSSSALACLLP*PHGQAGRFPEA Trigger: GGCTTCGGGGAACCTGCCAGCTTGGCCGTGTGGCCAAGGTAATAGGCAAGCCAAGGCAGAGCTAGAGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 72 bp | GCCACGTTCTCCACCTCCTCACAGTTTCCTCCCTTCTaGAGCTCTCCACGGGAAGCAGGCACGAGTCACCAG | + |
Preference number: 6 (lower is better) Translates to: ATFSTSSQFPPF*SSPREAGTSHQ Trigger: CTGGTGACTCGTGCCTGCTTCCCGTGGAGAGCTCCAGAAGGGAGGAAACTGTGAGGAGGTGGAGAACGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 72 bp | GCAGGAAGAGTGCAGTCATTCCAACAGCTGTCGCTCTaGGCTCTCCCGCTGTGTCACAGTGTGAGGCGTGTG | + |
Preference number: 6 (lower is better) Translates to: AGRVQSFQQLSL*ALPLCHSVRRV Trigger: CACACGCCTCACACTGTGACACAGCGGGAGAGCCCAGAGCGACAGCTGTTGGAATGACTGCACTCTTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000431422.2 ENST00000653261.1 ENST00000660399.1 |
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CDS CCA 72 bp | ACCAGAAGAGGGAGGCTCTTGGTGGGGCACTCTTGGTaGTCCGAGGACTCAATCAGGGTCCTAGAGGGTGAG | + |
Preference number: 6 (lower is better) Translates to: TRRGRLLVGHSW*SEDSIRVLEGE Trigger: CTCACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAAGAGTGCCCCACCAAGAGCCTCCCTCTTCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 72 bp | GTCACCAGAAGAGGGAGGCTCTTGGTGGGGCACTCTTaGTGGTCCGAGGACTCAATCAGGGTCCTAGAGGGT | + |
Preference number: 6 (lower is better) Translates to: VTRRGRLLVGHS*WSEDSIRVLEG Trigger: ACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAAGAGTGCCCCACCAAGAGCCTCCCTCTTCTGGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CAA 90 bp | GGTGCTGCAGGCTGCCCTTACCAGAGTCAGGGGCCACCGCCAGCTTaGCTGCTATCCTGGATTTTTAAATACTGCCCTGACCTCCCACTC | + |
Preference number: 6 (lower is better) Translates to: GAAGCPYQSQGPPPA*LLSWIFKYCPDLPL Trigger: GAGTGGGAGGTCAGGGCAGTATTTAAAAATCCAGGATAGCAGCAAAGCTGGCGGTGGCCCCTGACTCTGGTAAGGGCAGCCTGCAGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CCA 72 bp | CTTGGCTTGCCTATTACCTTGGCCACACGGCCAAGCTaGCAGGTTCCCCGAAGCCAGTCTATTCATGCCCAT | + |
Preference number: 6 (lower is better) Translates to: LGLPITLATRPS*QVPRSQSIHAH Trigger: ATGGGCATGAATAGACTGGCTTCGGGGAACCTGCCAGCTTGGCCGTGTGGCCAAGGTAATAGGCAAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 72 bp | GAGGGTGAGCCCATCTTAACCAGAGATGGCAGAACTTaGCCCAAGAAGGCCTTGTGGTCATCGGGGCTGTAC | + |
Preference number: 6 (lower is better) Translates to: EGEPILTRDGRT*PKKALWSSGLY Trigger: GTACAGCCCCGATGACCACAAGGCCTTCTTGGGTCAAGTTCTGCCATCTCTGGTTAAGATGGGCTCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 72 bp | GAGACCCTTGGAAAGGTCAGACTTGAGCAGGAAGAGTaGAGTCATTCCAACAGCTGTCGCTCTGGGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: ETLGKVRLEQEE*SHSNSCRSGLS Trigger: GGAGAGCCCAGAGCGACAGCTGTTGGAATGACTGCACTCTTCCTGCTCAAGTCTGACCTTTCCAAGGGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653261.1 |
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CDS CAA 72 bp | GGCTGCCCTTACCAGAGTCAGGGGCCACCGCCAGCTTaGCTGCTATCCTGGATTTTTAAATACTGCCCTGAC | + |
Preference number: 6 (lower is better) Translates to: GCPYQSQGPPPA*LLSWIFKYCPD Trigger: GTCAGGGCAGTATTTAAAAATCCAGGATAGCAGCAAAGCTGGCGGTGGCCCCTGACTCTGGTAAGGGCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 72 bp | TTGGTGGTCCGAGGACTCAATCAGGGTCCTAGAGGGTaGGCCCATCTTAACCAGAGATGGCAGAACTTGACC | + |
Preference number: 6 (lower is better) Translates to: LVVRGLNQGPRG*AHLNQRWQNLT Trigger: GGTCAAGTTCTGCCATCTCTGGTTAAGATGGGCTCACCCTCTAGGACCCTGATTGAGTCCTCGGACCACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS GCA 72 bp | CAAAGGCTTGGAAAGGTCAGACTTGAGCAGGAAGAGTaGAGTCATTCCAACAGCTGTCGCTCTGGGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: QRLGKVRLEQEE*SHSNSCRSGLS Trigger: GGAGAGCCCAGAGCGACAGCTGTTGGAATGACTGCACTCTTCCTGCTCAAGTCTGACCTTTCCAAGCCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000431422.2 ENST00000660399.1 |
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CDS CAA 90 bp | GGCTGTACGCAGCACACCCCTGGCACATTCTGTGCCTCTCTTCTTTaGACTCTATTTGTTGCCAGCAAACAGCGACGTCAGGACTTTGGG | + |
Preference number: 6 (lower is better) Translates to: GCTQHTPGTFCASLL*TLFVASKQRRQDFG Trigger: CCCAAAGTCCTGACGTCGCTGTTTGCTGGCAACAAATAGAGTCAAAAGAAGAGAGGCACAGAATGTGCCAGGGGTGTGCTGCGTACAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CAA 72 bp | TTGGGGTCCACACACTTTAGGTTTTGTCTAGCTGGCTaGGTGCAGGCCTCATCCCTTTCAGGAAGTCTTGCC | + |
Preference number: 6 (lower is better) Translates to: LGSTHFRFCLAG*VQASSLSGSLA Trigger: GGCAAGACTTCCTGAAAGGGATGAGGCCTGCACCAAGCCAGCTAGACAAAACCTAAAGTGTGTGGACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658387.1 |
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CDS CAA 90 bp | ACCTCCCACTCTGAGCTCCATTCTTTCCCCGATTCCTCAGGCAGCTaGGACTCGAGCCTGACTTGTCCAGTTCCTAGCCTTTTATTCTTC | + |
Preference number: 6 (lower is better) Translates to: TSHSELHSFPDSSGS*DSSLTCPVPSLLFF Trigger: GAAGAATAAAAGGCTAGGAACTGGACAAGTCAGGCTCGAGTCCAAGCTGCCTGAGGAATCGGGGAAAGAATGGAGCTCAGAGTGGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS TCA 72 bp | AGGACAAAGGCTTGTGTAGAGTCCAGAGGATGGCTTTaGTGCTCTTTCTGCTACAGGCTGGTTTGGGTGCCT | + |
Preference number: 6 (lower is better) Translates to: RTKACVESRGWL*CSFCYRLVWVP Trigger: AGGCACCCAAACCAGCCTGTAGCAGAAAGAGCATCAAAGCCATCCTCTGGACTCTACACAAGCCTTTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440090.5 |
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CDS GCA 72 bp | GCCAAGCTGGCAGGTTCCCCGAAGCCAGTCTATTCATaGCCATTCCTCAAGTTTGCTGTAGCTATTTGTGTG | + |
Preference number: 6 (lower is better) Translates to: AKLAGSPKPVYS*PFLKFAVAICV Trigger: CACACAAATAGCTACAGCAAACTTGAGGAATGGGCATGAATAGACTGGCTTCGGGGAACCTGCCAGCTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000431422.2 ENST00000440090.5 ENST00000456749.1 ENST00000653261.1 ENST00000655247.1 ENST00000655975.1 ENST00000656596.1 ENST00000656789.1 ENST00000658387.1 ENST00000660399.1 ENST00000661139.1 ENST00000664108.1 ENST00000666623.1 ENST00000667755.1 ENST00000669104.1 ENST00000669308.1 |
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CDS CAA 72 bp | GTGCACCACTGCACTCCAGCCAGATCACTGTCAGAATaGGCAGTACTAGGCAGTCCTCCTGATTTTCATTCC | + |
Preference number: 6 (lower is better) Translates to: VHHCTPARSLSE*AVLGSPPDFHS Trigger: GGAATGAAAATCAGGAGGACTGCCTAGTACTGCCAATTCTGACAGTGATCTGGCTGGAGTGCAGTGGTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653261.1 |
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CDS CAA 90 bp | GTGAGGCGTGTGCACCACTGCACTCCAGCCAGATCACTGTCAGAATaGGCAGTACTAGGCAGTCCTCCTGATTTTCATTCCAGAATTATA | + |
Preference number: 6 (lower is better) Translates to: VRRVHHCTPARSLSE*AVLGSPPDFHSRII Trigger: TATAATTCTGGAATGAAAATCAGGAGGACTGCCTAGTACTGCCAATTCTGACAGTGATCTGGCTGGAGTGCAGTGGTGCACACGCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653261.1 |
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CDS CCA 72 bp | CAGGAGGTTATGACTTCCTGGGCCACTTCTTCTCTCTaGTCTCACTCTATCTGGTTAGCTTCATCCAGTAAG | + |
Preference number: 6 (lower is better) Translates to: QEVMTSWATSSL*SHSIWLASSSK Trigger: CTTACTGGATGAAGCTAACCAGATAGAGTGAGACCAGAGAGAAGAAGTGGCCCAGGAAGTCATAACCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000655975.1 ENST00000656596.1 |
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CDS CAA 72 bp | TTTCAGCAGCCCACATTACTAATTCTGGCTGAGGGATaGGGAGCAGAAGAGACACGTGTCATCTCTGAGTTG | + |
Preference number: 6 (lower is better) Translates to: FQQPTLLILAEG*GAEETRVISEL Trigger: CAACTCAGAGATGACACGTGTCTCTTCTGCTCCCAATCCCTCAGCCAGAATTAGTAATGTGGGCTGCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655975.1 |
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CDS CAA 90 bp | CCTGACATTTTTCAGCAGCCCACATTACTAATTCTGGCTGAGGGATaGGGAGCAGAAGAGACACGTGTCATCTCTGAGTTGAGGCTGTTA | + |
Preference number: 6 (lower is better) Translates to: PDIFQQPTLLILAEG*GAEETRVISELRLL Trigger: TAACAGCCTCAACTCAGAGATGACACGTGTCTCTTCTGCTCCCAATCCCTCAGCCAGAATTAGTAATGTGGGCTGCTGAAAAATGTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655975.1 |
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CDS CAA 72 bp | TGTTTAAGGAGCTTAAACTCCTCGGATGCCCTGCCCTaGCCTCAGAATAAAATTGAAACCCAGCATACGGAG | + |
Preference number: 6 (lower is better) Translates to: CLRSLNSSDALP*PQNKIETQHTE Trigger: CTCCGTATGCTGGGTTTCAATTTTATTCTGAGGCAAGGGCAGGGCATCCGAGGAGTTTAAGCTCCTTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666623.1 |
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CDS TCA 72 bp | TTGTTCAGCCGCATCATTTGCCTACTTCTCATAGCTTaGAAGGGGAATAAAAGGCAGATTGCCTCACCACCT | + |
Preference number: 6 (lower is better) Translates to: LFSRIICLLLIA*KGNKRQIASPP Trigger: AGGTGGTGAGGCAATCTGCCTTTTATTCCCCTTTCAAGCTATGAGAAGTAGGCAAATGATGCGGCTGAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656789.1 |
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CDS TCA 72 bp | CAGCGGCTTGATTCTTCCTTTCTAATCCTGCTAGGGTaGTCTTCCCAAAACACAAGCACATTCAATTCCCTG | + |
Preference number: 6 (lower is better) Translates to: QRLDSSFLILLG*SSQNTSTFNSL Trigger: CAGGGAATTGAATGTGCTTGTGTTTTGGGAAGATCACCCTAGCAGGATTAGAAAGGAAGAATCAAGCCGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666623.1 |
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CDS CAA 90 bp | AATTCCCTGTGTTTAAGGAGCTTAAACTCCTCGGATGCCCTGCCCTaGCCTCAGAATAAAATTGAAACCCAGCATACGGAGACTTTAATG | + |
Preference number: 6 (lower is better) Translates to: NSLCLRSLNSSDALP*PQNKIETQHTETLM Trigger: CATTAAAGTCTCCGTATGCTGGGTTTCAATTTTATTCTGAGGCAAGGGCAGGGCATCCGAGGAGTTTAAGCTCCTTAAACACAGGGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666623.1 |
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CDS TCA 72 bp | TTGATGCTCTTTCTGCTACAGGCTGGTTTGGGTGCCTaGGTTAGAAGTGTTAAAAGGGCACAGAAAACAGAT | + |
Preference number: 6 (lower is better) Translates to: LMLFLLQAGLGA*VRSVKRAQKTD Trigger: ATCTGTTTTCTGTGCCCTTTTAACACTTCTAACTCAGGCACCCAAACCAGCCTGTAGCAGAAAGAGCATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000440090.5 |
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CDS TCA 72 bp | ATAGGACAAAGGCTAGGTTTTGGTCCTGCTGTATCCTaGCATATAGAAAGTCCAAGTCAGGAACAGGAGGTT | + |
Preference number: 6 (lower is better) Translates to: IGQRLGFGPAVS*HIESPSQEQEV Trigger: AACCTCCTGTTCCTGACTTGGACTTTCTATATGTCAGGATACAGCAGGACCAAAACCTAGCCTTTGTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655247.1 |
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CDS TCA 72 bp | GCTCTTCAAAGTAAGGACCATACTATGGCATCTTCTTaGGGAAGCTTGATTAAATCCAGCAAAGTGCCCTGC | + |
Preference number: 6 (lower is better) Translates to: ALQSKDHTMASS*GSLIKSSKVPC Trigger: GCAGGGCACTTTGCTGGATTTAATCAAGCTTCCTCAAGAAGATGCCATAGTATGGTCCTTACTTTGAAGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664108.1 |
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CDS TCA 72 bp | GTAAGGACCATACTATGGCATCTTCTTGAGGAAGCTTaGTTAAATCCAGCAAAGTGCCCTGCAGTTAACTGT | + |
Preference number: 6 (lower is better) Translates to: VRTILWHLLEEA*LNPAKCPAVNC Trigger: ACAGTTAACTGCAGGGCACTTTGCTGGATTTAATCAAGCTTCCTCAAGAAGATGCCATAGTATGGTCCTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664108.1 |
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CDS TCA 72 bp | TCATTAGGTTTTGACAGTATTATAGCGACAGCGGCTTaGTTCTTCCTTTCTAATCCTGCTAGGGTGATCTTC | + |
Preference number: 6 (lower is better) Translates to: SLGFDSIIATAA*FFLSNPARVIF Trigger: GAAGATCACCCTAGCAGGATTAGAAAGGAAGAATCAAGCCGCTGTCGCTATAATACTGTCAAAACCTAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666623.1 |
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CDS TCA 72 bp | ATAGGACAAAGGCTAGGTTTTGGTCCTGCTGTATCCTaGCATATCTTTTCTAATGTTCCTTGTATGATTCTG | + |
Preference number: 6 (lower is better) Translates to: IGQRLGFGPAVS*HIFSNVPCMIL Trigger: CAGAATCATACAAGGAACATTAGAAAAGATATGTCAGGATACAGCAGGACCAAAACCTAGCCTTTGTCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669308.1 |
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CDS CAA 72 bp | ATTCATTTTTCAGACACCTCTGCATATATAACAGTGTaGGTACAGAAAGTCCAAGTCAGGAACAGGAGGTTA | + |
Preference number: 6 (lower is better) Translates to: IHFSDTSAYITV*VQKVQVRNRRL Trigger: TAACCTCCTGTTCCTGACTTGGACTTTCTGTACCAACACTGTTATATATGCAGAGGTGTCTGAAAAATGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661139.1 |
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CDS CAA 72 bp | TGGTTCTGTTCTAATTCTCCTGACTTAATGGACTCATaGGTCATTCCAGATGCTCTGATCCTAATAATCCTT | + |
Preference number: 6 (lower is better) Translates to: WFCSNSPDLMDS*VIPDALILIIL Trigger: AAGGATTATTAGGATCAGAGCATCTGGAATGACCAATGAGTCCATTAAGTCAGGAGAATTAGAACAGAACCA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655975.1 |
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CDS CAA 90 bp | TTGATCTGCATTCATTTTTCAGACACCTCTGCATATATAACAGTGTaGGTACCTAGTAATTTCCCGAGCAAGAGACAGCTGATAATCAAA | + |
Preference number: 6 (lower is better) Translates to: LICIHFSDTSAYITV*VPSNFPSKRQLIIK Trigger: TTTGATTATCAGCTGTCTCTTGCTCGGGAAATTACTAGGTACCAACACTGTTATATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000456749.1 |
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CDS CAA 90 bp | TCCAAAGGTCATATTTTACAGATGTGCTCTGTGTGGAACTGGAAATaGATCTGCATTCATTTTTCAGACACCTCTGCATATATAACAGTG | + |
Preference number: 6 (lower is better) Translates to: SKGHILQMCSVWNWK*ICIHFSDTSAYITV Trigger: CACTGTTATATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAATTTCCAGTTCCACACAGAGCACATCTGTAAAATATGACCTTTGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456749.1 ENST00000661139.1 |
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CDS GCA 72 bp | TTACAGATGTGCTCTGTGTGGAACTGGAAATTGATCTaGATTCATTTTTCAGACACCTCTGCATATATAACA | + |
Preference number: 6 (lower is better) Translates to: LQMCSVWNWKLI*IHFSDTSAYIT Trigger: TGTTATATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAATTTCCAGTTCCACACAGAGCACATCTGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000456749.1 ENST00000661139.1 |
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CDS TCA 72 bp | ATATTTTACAGATGTGCTCTGTGTGGAACTGGAAATTaGTCTGCATTCATTTTTCAGACACCTCTGCATATA | + |
Preference number: 6 (lower is better) Translates to: IFYRCALCGTGN*SAFIFQTPLHI Trigger: TATATGCAGAGGTGTCTGAAAAATGAATGCAGATCAATTTCCAGTTCCACACAGAGCACATCTGTAAAATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000456749.1 ENST00000661139.1 |