Pregenerated sensors for LINC00928 (Homo sapiens)
Ensembl gene IDs: ENSG00000259218Ensembl transcript IDs: ENST00000559227.1, ENST00000559967.2, ENST00000561108.6, ENST00000561201.5, ENST00000660770.1, ENST00000661183.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCTCTTGGGGAACCCTGCTGCTGAGTGAAGAGCCCATGCTAGCCTaGTGGCGGCCCCTGGCTCAGCCAACAGCCAACATCAACAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSWGTLLLSEEPMLA*WRPLAQPTANINSQ Trigger: CTGGCTGTTGATGTTGGCTGTTGGCTGAGCCAGGGGCCGCCAGCAGGCTAGCATGGGCTCTTCACTCAGCAGCAGGGTTCCCCAAGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CCA 90 bp | TCTTGGGGAACCCTGCTGCTGAGTGAAGAGCCCATGCTAGCCTGCTaGCGGCCCCTGGCTCAGCCAACAGCCAACATCAACAGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SWGTLLLSEEPMLAC*RPLAQPTANINSQT Trigger: GGTCTGGCTGTTGATGTTGGCTGTTGGCTGAGCCAGGGGCCGCCAGCAGGCTAGCATGGGCTCTTCACTCAGCAGCAGGGTTCCCCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS TCA 90 bp | CAGTTCAAACCCTGTGGGGCTTTCTGTGTGTTGTACAGCATAGGGTaGGCACATACCAGGCGCTCAGCACCTACCCCATCCCTGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QFKPCGAFCVLYSIG*AHTRRSAPTPSLAL Trigger: CAGTGCCAGGGATGGGGTAGGTGCTGAGCGCCTGGTATGTGCTCACCCTATGCTGTACAACACACAGAAAGCCCCACAGGGTTTGAACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS GCA 90 bp | AGGGCATGCCACGAGCAGCTGTCACAAGCCAGGTCTTATGCTAGGTaGTCCTCTCAACAGGTTCTTGAGCTGCCACCAGACCATTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RACHEQLSQARSYAR*SSQQVLELPPDHSG Trigger: ACCTGAATGGTCTGGTGGCAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGCTGCTCGTGGCATGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660770.1 |
||
| CDS GCA 90 bp | AGGGCATGCCACGAGCAGCTGTCACAAGCCAGGTCTTATGCTAGGTaGTCCTCTCAACAGGTTCTTGAGCTTACACACACATCTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RACHEQLSQARSYAR*SSQQVLELTHTSAG Trigger: CCCAGCAGATGTGTGTGTAAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGCTGCTCGTGGCATGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561108.6 |
||
| CDS CCA 90 bp | CAGTCCAAAGGCTCACAGATAAACCTCAGGATTCCCAGGGGAAGATaGAAACAGATTAGTGACAGCAGCAGCCTCCATGAACTGGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSKGSQINLRIPRGR*KQISDSSSLHELGA Trigger: AGCGCCCAGTTCATGGAGGCTGCTGCTGTCACTAATCTGTTTCCATCTTCCCCTGGGAATCCTGAGGTTTATCTGTGAGCCTTTGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS CCA 90 bp | CTCAGAGAGGTCGATCACTTGTCTAAAAGTCACCCAGCTAGAGGGTaGCAGATCTGTCACAAGCCAGGTCTTATGCTAGGTGCTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LREVDHLSKSHPARG*QICHKPGLMLGAPL Trigger: GAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGATCTGCCACCCTCTAGCTGGGTGACTTTTAGACAAGTGATCGACCTCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000559967.2 |
||
| CDS CCA 90 bp | GGGGAAGATGGAAACAGATTAGTGACAGCAGCAGCCTCCATGAACTaGGCGCTCCTAGGAGTCAAACACGAAGCTAAGCCTTGTCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GEDGNRLVTAAASMN*ALLGVKHEAKPCLC Trigger: ACAAAGACAAGGCTTAGCTTCGTGTTTGACTCCTAGGAGCGCCCAGTTCATGGAGGCTGCTGCTGTCACTAATCTGTTTCCATCTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS CCA 90 bp | GATACTGTTAAGCACACCAGGATGCTGGAATCTCCTGCCTCTTACTaGCAGATAACCTGCCCCTCCCAGAACTTAGAGAATACTAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DTVKHTRMLESPASY*QITCPSQNLENTKC Trigger: GCACTTAGTATTCTCTAAGTTCTGGGAGGGGCAGGTTATCTGCCAGTAAGAGGCAGGAGATTCCAGCATCCTGGTGTGCTTAACAGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661183.1 |
||
| CDS CCA 90 bp | TTCAATTATAGCCCCCAAATGGCAAATGGATCTGAGTGCCCAGGGTaGTCCATGGTCGAAGCGAGAGTAATGAGAAAGATCCCAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: FNYSPQMANGSECPG*SMVEARVMRKIPNT Trigger: AGTATTTGGGATCTTTCTCATTACTCTCGCTTCGACCATGGACCACCCTGGGCACTCAGATCCATTTGCCATTTGGGGGCTATAATTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS GCA 90 bp | TGCCCCTCCCAGAACTTAGAGAATACTAAGTGCACAGGACATACCTaGCACCAGACCATTCAGGTACATGGTGTTTTTACTACCATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CPSQNLENTKCTGHT*HQTIQVHGVFTTIS Trigger: AGAAATGGTAGTAAAAACACCATGTACCTGAATGGTCTGGTGGCAGGTATGTCCTGTGCACTTAGTATTCTCTAAGTTCTGGGAGGGGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000661183.1 |
||
| CDS GCA 90 bp | AGCATCCTGCTCACTCCCTCCAGAGCAGTAATCATAACTTGTCATTaGTTTCTTATGTGGTTGTTACTGATTGCAGCAGATGTTGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SILLTPSRAVIITCH*FLMWLLLIAADVAV Trigger: TACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACTGCTCTGGAGGGAGTGAGCAGGATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS TCA 90 bp | CTGCCACCAGACCATTCAGGTACATGGTGTTTTTACTACCATTTCTaGGATCAGGCAAGTTTCAGATCTGTTTTCATGAAGCTAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPDHSGTWCFYYHF*DQASFRSVFMKLEE Trigger: CTCTTCTAGCTTCATGAAAACAGATCTGAAACTTGCCTGATCTCAGAAATGGTAGTAAAAACACCATGTACCTGAATGGTCTGGTGGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000559227.1 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 90 bp | AGTAATCATAACTTGTCATTGCTTTCTTATGTGGTTGTTACTGATTaGAGCAGATGTTGCAGTATTTCAAGCCTGATAATCACAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNHNLSLLSYVVVTD*SRCCSISSLIITGL Trigger: CAAGCCTGTGATTATCAGGCTTGAAATACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS TCA 72 bp | GTTGGGCTTGTCCTCTTGGGGAACCCTGCTGCTGAGTaGAGAGCCCATGCTAGCCTGCTGGCGGCCCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VGLVLLGNPAAE*RAHASLLAAPG Trigger: GCCAGGGGCCGCCAGCAGGCTAGCATGGGCTCTTCACTCAGCAGCAGGGTTCCCCAAGAGGACAAGCCCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | GGAACCCTGCTGCTGAGTGAAGAGCCCATGCTAGCCTaGTGGCGGCCCCTGGCTCAGCCAACAGCCAACATC | + |
|
Preference number: 6 (lower is better) Translates to: GTLLLSEEPMLA*WRPLAQPTANI Trigger: GATGTTGGCTGTTGGCTGAGCCAGGGGCCGCCAGCAGGCTAGCATGGGCTCTTCACTCAGCAGCAGGGTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CCA 72 bp | ACCCTGCTGCTGAGTGAAGAGCCCATGCTAGCCTGCTaGCGGCCCCTGGCTCAGCCAACAGCCAACATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TLLLSEEPMLAC*RPLAQPTANIN Trigger: GTTGATGTTGGCTGTTGGCTGAGCCAGGGGCCGCCAGCAGGCTAGCATGGGCTCTTCACTCAGCAGCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | CACGAGCAGCTGTCACAAGCCAGGTCTTATGCTAGGTaGTCCTCTCAACAGGTTCTTGAGCTGCCACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HEQLSQARSYAR*SSQQVLELPPD Trigger: GTCTGGTGGCAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGCTGCTCGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660770.1 |
||
| CDS CCA 72 bp | GGCTTGAAAAGCACATGTGTGTTGGGCTTGTCCTCTTaGGGAACCCTGCTGCTGAGTGAAGAGCCCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GLKSTCVLGLSS*GTLLLSEEPML Trigger: TAGCATGGGCTCTTCACTCAGCAGCAGGGTTCCCCAAGAGGACAAGCCCAACACACATGTGCTTTTCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CCA 72 bp | AGCCCCCAAATGGCAAATGGATCTGAGTGCCCAGGGTaGTCCATGGTCGAAGCGAGAGTAATGAGAAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: SPQMANGSECPG*SMVEARVMRKI Trigger: GATCTTTCTCATTACTCTCGCTTCGACCATGGACCACCCTGGGCACTCAGATCCATTTGCCATTTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS CAA 90 bp | TCAAGCCTGATAATCACAGGCTTGAAAAGCACATGTGTGTTGGGCTaGTCCTCTTGGGGAACCCTGCTGCTGAGTGAAGAGCCCATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLIITGLKSTCVLG*SSWGTLLLSEEPML Trigger: TAGCATGGGCTCTTCACTCAGCAGCAGGGTTCCCCAAGAGGACAAGCCCAACACACATGTGCTTTTCAAGCCTGTGATTATCAGGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | CACGAGCAGCTGTCACAAGCCAGGTCTTATGCTAGGTaGTCCTCTCAACAGGTTCTTGAGCTTACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: HEQLSQARSYAR*SSQQVLELTHT Trigger: TGTGTGTGTAAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGCTGCTCGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000561108.6 |
||
| CDS CAA 72 bp | AGCCTGATAATCACAGGCTTGAAAAGCACATGTGTGTaGGGCTTGTCCTCTTGGGGAACCCTGCTGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLIITGLKSTCV*GLSSWGTLLLS Trigger: ACTCAGCAGCAGGGTTCCCCAAGAGGACAAGCCCAACACACATGTGCTTTTCAAGCCTGTGATTATCAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | GATTCTGATTTAGGAGACCTGCAGTGGAGCCTGAGATaGTGGATTTCTCACAAGTCCCAGGTGATGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: DSDLGDLQWSLR*WISHKSQVMPM Trigger: CATTGGCATCACCTGGGACTTGTGAGAAATCCAGCATCTCAGGCTCCACTGCAGGTCTCCTAAATCAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | GTGGCAGATCTGTCACAAGCCAGGTCTTATGCTAGGTaGTCCTCTCAACAGGTTCTTGAGCTTACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: VADLSQARSYAR*SSQQVLELTHT Trigger: TGTGTGTGTAAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACAGATCTGCCAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559967.2 |
||
| CDS CAA 72 bp | ATAATCACAGGCTTGAAAAGCACATGTGTGTTGGGCTaGTCCTCTTGGGGAACCCTGCTGCTGAGTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IITGLKSTCVLG*SSWGTLLLSEE Trigger: CTCTTCACTCAGCAGCAGGGTTCCCCAAGAGGACAAGCCCAACACACATGTGCTTTTCAAGCCTGTGATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CAA 72 bp | CCAGGTCTTATGCTAGGTGCTCCTCTCAACAGGTTCTaGAGCTTACACACACATCTGCTGGGGATCTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PGLMLGAPLNRF*SLHTHLLGILL Trigger: TAACAAGATCCCCAGCAGATGTGTGTGTAAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559967.2 ENST00000561108.6 |
||
| CDS CAA 90 bp | GATTGCAGCAGATGTTGCAGTATTTCAAGCCTGATAATCACAGGCTaGAAAAGCACATGTGTGTTGGGCTTGTCCTCTTGGGGAACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DCSRCCSISSLIITG*KSTCVLGLSSWGTL Trigger: CAGGGTTCCCCAAGAGGACAAGCCCAACACACATGTGCTTTTCAAGCCTGTGATTATCAGGCTTGAAATACTGCAACATCTGCTGCAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CAA 90 bp | TGTCACAAGCCAGGTCTTATGCTAGGTGCTCCTCTCAACAGGTTCTaGAGCTTACACACACATCTGCTGGGGATCTTGTTAAACTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: CHKPGLMLGAPLNRF*SLHTHLLGILLNCR Trigger: TCTACAGTTTAACAAGATCCCCAGCAGATGTGTGTGTAAGCTCAAGAACCTGTTGAGAGGAGCACCTAGCATAAGACCTGGCTTGTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000559967.2 ENST00000561108.6 |
||
| CDS CAA 90 bp | CAAGGGAGGGTCTTCACTCACTTCTTCATGCTACTGCAGAGTATGTaGTCCATACAGCAGTCCAAAGGCTCACAGATAAACCTCAGGATT | + |
|
Preference number: 6 (lower is better) Translates to: QGRVFTHFFMLLQSM*SIQQSKGSQINLRI Trigger: AATCCTGAGGTTTATCTGTGAGCCTTTGGACTGCTGTATGGACAACATACTCTGCAGTAGCATGAAGAAGTGAGTGAAGACCCTCCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS GCA 72 bp | TTCAAGGGAGGGTCTTCACTCACTTCTTCATGCTACTaGAGAGTATGTTGTCCATACAGCAGTCCAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: FKGGSSLTSSCY*RVCCPYSSPKA Trigger: AGCCTTTGGACTGCTGTATGGACAACATACTCTGCAGTAGCATGAAGAAGTGAGTGAAGACCCTCCCTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS CCA 72 bp | TCTGAATTGGTCTTTAATTCAATTATAGCCCCCAAATaGCAAATGGATCTGAGTGCCCAGGGTGGTCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SELVFNSIIAPK*QMDLSAQGGPW Trigger: CCATGGACCACCCTGGGCACTCAGATCCATTTGCCATTTGGGGGCTATAATTGAATTAAAGACCAATTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS CAA 90 bp | CAGCATCCTGCTCACTCCCTCCAGAGCAGTAATCATAACTTGTCATaGCTTTCTTATGTGGTTGTTACTGATTGCAGCAGATGTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QHPAHSLQSSNHNLS*LSYVVVTDCSRCCS Trigger: ACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACTGCTCTGGAGGGAGTGAGCAGGATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CAA 72 bp | GTCTTCACTCACTTCTTCATGCTACTGCAGAGTATGTaGTCCATACAGCAGTCCAAAGGCTCACAGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VFTHFFMLLQSM*SIQQSKGSQIN Trigger: GTTTATCTGTGAGCCTTTGGACTGCTGTATGGACAACATACTCTGCAGTAGCATGAAGAAGTGAGTGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 |
||
| CDS CAA 90 bp | TCCATGGTCGAAGCGAGAGTAATGAGAAAGATCCCAAATACTTTCTaGCTTAAAGCACACCTCACATCTTTGCTTAAAGCCCAAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SMVEARVMRKIPNTF*LKAHLTSLLKAQGL Trigger: AAGCCCTTGGGCTTTAAGCAAAGATGTGAGGTGTGCTTTAAGCAAGAAAGTATTTGGGATCTTTCTCATTACTCTCGCTTCGACCATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS GCA 72 bp | CAGAACTTAGAGAATACTAAGTGCACAGGACATACCTaGCACCAGACCATTCAGGTACATGGTGTTTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: QNLENTKCTGHT*HQTIQVHGVFT Trigger: AGTAAAAACACCATGTACCTGAATGGTCTGGTGGCAGGTATGTCCTGTGCACTTAGTATTCTCTAAGTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661183.1 |
||
| CDS CCA 72 bp | TTATATGGGAGGCTGCTCTTTTTCCTAGGAGATGCCTaGTTTCGAGGTAAAATGTCATATGTCTCCAACACA | + |
|
Preference number: 6 (lower is better) Translates to: LYGRLLFFLGDA*FRGKMSYVSNT Trigger: TGTGTTGGAGACATATGACATTTTACCTCGAAACCAGGCATCTCCTAGGAAAAAGAGCAGCCTCCCATATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000559967.2 ENST00000561108.6 ENST00000660770.1 |
||
| CDS CAA 72 bp | GCTCACTCCCTCCAGAGCAGTAATCATAACTTGTCATaGCTTTCTTATGTGGTTGTTACTGATTGCAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AHSLQSSNHNLS*LSYVVVTDCSR Trigger: TCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACTGCTCTGGAGGGAGTGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CAA 72 bp | CCAAATACTTTCTTGCTTAAAGCACACCTCACATCTTaGCTTAAAGCCCAAGGGCTTAACAATGAAGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PNTFLLKAHLTS*LKAQGLNNEGG Trigger: CCCTCCTTCATTGTTAAGCCCTTGGGCTTTAAGCAAAGATGTGAGGTGTGCTTTAAGCAAGAAAGTATTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS CAA 72 bp | GAAGCGAGAGTAATGAGAAAGATCCCAAATACTTTCTaGCTTAAAGCACACCTCACATCTTTGCTTAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: EARVMRKIPNTF*LKAHLTSLLKA Trigger: GGCTTTAAGCAAAGATGTGAGGTGTGCTTTAAGCAAGAAAGTATTTGGGATCTTTCTCATTACTCTCGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000559227.1 |
||
| CDS TCA 72 bp | GACCATTCAGGTACATGGTGTTTTTACTACCATTTCTaGGATCAGGCAAGTTTCAGATCTGTTTTCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: DHSGTWCFYYHF*DQASFRSVFMK Trigger: CTTCATGAAAACAGATCTGAAACTTGCCTGATCTCAGAAATGGTAGTAAAAACACCATGTACCTGAATGGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000559227.1 ENST00000660770.1 ENST00000661183.1 |
||
| CDS GCA 72 bp | AACTTGTCATTGCTTTCTTATGTGGTTGTTACTGATTaGAGCAGATGTTGCAGTATTTCAAGCCTGATAATC | + |
|
Preference number: 6 (lower is better) Translates to: NLSLLSYVVVTD*SRCCSISSLII Trigger: GATTATCAGGCTTGAAATACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CCA 72 bp | AGAGCAGTAATCATAACTTGTCATTGCTTTCTTATGTaGTTGTTACTGATTGCAGCAGATGTTGCAGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: RAVIITCHCFLM*LLLIAADVAVF Trigger: AAATACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACTGCTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||
| CDS CAA 72 bp | GCAGTAATCATAACTTGTCATTGCTTTCTTATGTGGTaGTTACTGATTGCAGCAGATGTTGCAGTATTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: AVIITCHCFLMW*LLIAADVAVFQ Trigger: TTGAAATACTGCAACATCTGCTGCAATCAGTAACAACCACATAAGAAAGCAATGACAAGTTATGATTACTGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000559227.1 ENST00000559967.2 ENST00000561108.6 ENST00000561201.5 ENST00000660770.1 ENST00000661183.1 |
||