Pregenerated sensors for LINC00887 (Homo sapiens)
Ensembl gene IDs: ENSG00000214145Ensembl transcript IDs: ENST00000397644.2, ENST00000414120.1, ENST00000429578.5, ENST00000456816.6, ENST00000654752.1, ENST00000659219.1, ENST00000660996.1, ENST00000669998.1, ENST00000670716.1, ENST00000670959.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AAAGGCCAGGAATGTGCCACAGCGGCATTCAGGAAAATTCGGCGATaGGTGCCACCGTTGGGTGCGCGCCCCGTCCCTCTAGTGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: KGQECATAAFRKIRR*VPPLGARPVPLVPG Trigger: ACCTGGCACTAGAGGGACGGGGCGCGCACCCAACGGTGGCACGCATCGCCGAATTTTCCTGAATGCCGCTGTGGCACATTCCTGGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS CCA 90 bp | GTAACCCTGAGATACAAGCCAGCCCGAGAAGAATGGGCATGTGTGTaGGAGCAGCGGGCCGACAGGAGCACAGGAACACCAGAGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: VTLRYKPAREEWACV*EQRADRSTGTPEEA Trigger: TGCTTCCTCTGGTGTTCCTGTGCTCCTGTCGGCCCGCTGCTCCCACACACATGCCCATTCTTCTCGGGCTGGCTTGTATCTCAGGGTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS CCA 90 bp | TCCCACACTTCAAGCAAGAGGATAAGTAAAGTTCTAACAGTGTGCTaGGGGACAGCCCTTACCACCACCACAGCCCGCCAGCCCACCCCC | + |
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Preference number: 5 (lower is better) Translates to: SHTSSKRISKVLTVC*GTALTTTTARQPTP Trigger: GGGGGTGGGCTGGCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGAAGTGTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS TCA 90 bp | TTTGAGAGAAGATCTAAGCTAAGCCGCCACAGCGAGGGACCACATTaGGAAGATCGGAGCCTGCCTGGCCGTTGTGAGCCTCCTCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: FERRSKLSRHSEGPH*EDRSLPGRCEPPLL Trigger: CAGGAGAGGAGGCTCACAACGGCCAGGCAGGCTCCGATCTTCTCAATGTGGTCCCTCGCTGTGGCGGCTTAGCTTAGATCTTCTCTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669998.1 |
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| CDS GCA 90 bp | AGCTCCCACACTTCAAGCAAGAGGATAAGTAAAGTTCTAACAGTGTaGTGGGGGACAGCCCTTACCACCACCACAGCCCGCCAGCCCACC | + |
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Preference number: 5 (lower is better) Translates to: SSHTSSKRISKVLTV*WGTALTTTTARQPT Trigger: GGTGGGCTGGCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGAAGTGTGGGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS TCA 90 bp | GAGGTGGGAAAGGGCTGGCTGGTCCTGTCAACTCCGATAAACAGGTaGAACACTGGCCAGGTGTTCCTGGAACTGGGATCTCCCCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: EVGKGWLVLSTPINR*NTGQVFLELGSPLF Trigger: GAAAAGGGGAGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGCCAGCCCTTTCCCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS TCA 90 bp | ACACCAGAGGAAGCAGCTGCGGAGAAGAGACCGTGCGTCCTGATCTaGAGATGGGAAGCGAGAGGTCCCTCCAGGAAGGAATGTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: TPEEAAAEKRPCVLI*RWEARGPSRKECLV Trigger: AACTAGACATTCCTTCCTGGAGGGACCTCTCGCTTCCCATCTTCAGATCAGGACGCACGGTCTCTTCTCCGCAGCTGCTTCCTCTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS CCA 90 bp | CCACGTTCTGTGCTTTCTGTTCGGACTCCAGCCAAGAGCCAAAGGTaGGTTGGACAAGGGGAGGGCAATAGTGGTGACGAGAAGTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: PRSVLSVRTPAKSQR*VGQGEGNSGDEKCL Trigger: CAGACACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGAACAGAAAGCACAGAACGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670959.1 |
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| CDS TCA 90 bp | TGTGTGCAGAAGAGTCTGAAGGCAGGGTTGGAACTTACTGGGAAATaGCGAGAACAGGGAGAGCCAGCTAGGAGACTCACCGGACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: CVQKSLKAGLELTGK*REQGEPARRLTGLQ Trigger: CTGGAGTCCGGTGAGTCTCCTAGCTGGCTCTCCCTGTTCTCGTCATTTCCCAGTAAGTTCCAACCCTGCCTTCAGACTCTTCTGCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CCA 90 bp | AGGAGGAAGCATTGGGAATGGCTCCTTGCTTTTAGGGACCCTGTCTaGGACTGTAACCACAGCTTCCTGAATGGTCTCCAGCTCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RRKHWEWLLAFRDPV*DCNHSFLNGLQLPH Trigger: GTGTGGGAGCTGGAGACCATTCAGGAAGCTGTGGTTACAGTCCCAGACAGGGTCCCTAAAAGCAAGGAGCCATTCCCAATGCTTCCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS CCA 90 bp | AAAGGGCTGGCTGGTCCTGTCAACTCCGATAAACAGGTGAAACACTaGCCAGGTGTTCCTGGAACTGGGATCTCCCCTTTTCTCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: KGLAGPVNSDKQVKH*PGVPGTGISPFLSH Trigger: ATGGGAGAGAAAAGGGGAGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGCCAGCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS CCA 90 bp | AGGAGAGCAGTGAGAGAACCAGAGAGAACAGGGACATGGACCACATaGTCCTTTGGAATGAATGTGGCTGACAGAGTGAGACGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: RRAVREPERTGTWTT*SFGMNVADRVRREG Trigger: TCCCTCCCGTCTCACTCTGTCAGCCACATTCATTCCAAAGGACCATGTGGTCCATGTCCCTGTTCTCTCTGGTTCTCTCACTGCTCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 90 bp | GGGGAGGGCAATAGTGGTGACGAGAAGTGTCTGATTTGGAAACGATaGCTCAGTCGAAGGGAGATAGGAACCTGCCAAGCAGGATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: GEGNSGDEKCLIWKR*LSRREIGTCQAGCL Trigger: AAGACATCCTGCTTGGCAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACACTTCTCGTCACCACTATTGCCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS GCA 90 bp | CCGCCCGGCCGGATTTGGCATTTTCAAAGCACACTATCGTTTTCTTaGTGGATTGATGTCTGGCAAGCTTGCCTGATAACTGGCCTGGGT | + |
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Preference number: 5 (lower is better) Translates to: PPGRIWHFQSTLSFS*WIDVWQACLITGLG Trigger: ACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTGAAAATGCCAAATCCGGCCGGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS CCA 90 bp | GTTGGACAAGGGGAGGGCAATAGTGGTGACGAGAAGTGTCTGATTTaGAAACGATGCCTCAGTCGAAGGGAGATAGGAACCTGCCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: VGQGEGNSGDEKCLI*KRCLSRREIGTCQA Trigger: TGCTTGGCAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS GCA 90 bp | GCAACACAAGGATCCAGTAATATAACCAGGCACAGAGCAGGACGCTaGAGCGATACTCCCTCCCTTATCTTCTGGGTGGAATTTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: ATQGSSNITRHRAGR*SDTPSLIFWVEFCK Trigger: CTTGCAAAATTCCACCCAGAAGATAAGGGAGGGAGTATCGCTGCAGCGTCCTGCTCTGTGCCTGGTTATATTACTGGATCCTTGTGTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS CCA 90 bp | CCCGGCCGGATTTGGCATTTTCAAAGCACACTATCGTTTTCTTGCTaGATTGATGTCTGGCAAGCTTGCCTGATAACTGGCCTGGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: PGRIWHFQSTLSFSC*IDVWQACLITGLGV Trigger: TACACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTGAAAATGCCAAATCCGGCCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS TCA 90 bp | GAGAACAGGGACATGGACCACATGGTCCTTTGGAATGAATGTGGCTaGCAGAGTGAGACGGGAGGGAAAAGATGGGATCTGACTTACTTT | + |
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Preference number: 5 (lower is better) Translates to: ENRDMDHMVLWNECG*QSETGGKRWDLTYF Trigger: AAAGTAAGTCAGATCCCATCTTTTCCCTCCCGTCTCACTCTGTCAGCCACATTCATTCCAAAGGACCATGTGGTCCATGTCCCTGTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS TCA 90 bp | TCCTTGCTTTTAGGGACCCTGTCTGGGACTGTAACCACAGCTTCCTaGATGGTCTCCAGCTCCCACACTTCAAGCAAGAGGATAAGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SLLLGTLSGTVTTAS*MVSSSHTSSKRISK Trigger: TTTACTTATCCTCTTGCTTGAAGTGTGGGAGCTGGAGACCATTCAGGAAGCTGTGGTTACAGTCCCAGACAGGGTCCCTAAAAGCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS TCA 90 bp | ATGCCCTCACCACTTCCATCCTCTCAGATAAGATCATTTCACTCCTaGGAGAGGATCTTCCTTCTCCTAAAGCCTCCTAAACCTCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: MPSPLPSSQIRSFHS*ERIFLLLKPPKPHG Trigger: GCCGTGAGGTTTAGGAGGCTTTAGGAGAAGGAAGATCCTCTCTCAGGAGTGAAATGATCTTATCTGAGAGGATGGAAGTGGTGAGGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS GCA 90 bp | CCCCAGCACAAGTCCTTGGATTCTTTGTCATGTTTAAGAGGAGGCTaGTGTGTGACTTCAGACAATTTCAGCCTCCTGCGCATCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PQHKSLDSLSCLRGG*CVTSDNFSLLRISS Trigger: AGAACTGATGCGCAGGAGGCTGAAATTGTCTGAAGTCACACAGCAGCCTCCTCTTAAACATGACAAAGAATCCAAGGACTTGTGCTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS GCA 90 bp | TGTCTGATTTGGAAACGATGCCTCAGTCGAAGGGAGATAGGAACCTaGCAAGCAGGATGTCTTAGAGGCAGTGGATTCTCAGCATACACA | + |
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Preference number: 5 (lower is better) Translates to: CLIWKRCLSRREIGT*QAGCLRGSGFSAYT Trigger: TGTGTATGCTGAGAATCCACTGCCTCTAAGACATCCTGCTTGGCAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS TCA 90 bp | CCGGATTTGGCATTTTCAAAGCACACTATCGTTTTCTTGCTGGATTaGTGTCTGGCAAGCTTGCCTGATAACTGGCCTGGGTGTACTTCC | + |
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Preference number: 5 (lower is better) Translates to: PDLAFSKHTIVFLLD*CLASLPDNWPGCTS Trigger: GGAAGTACACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTGAAAATGCCAAATCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS GCA 90 bp | AAAAGGTCTTGGAGGGAAAGAGTTCCAAGCAGAAGAAACAGTAAGTaGAAACATTGTGAGGCAGGAGAGAGTAAGCACAGAGGAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KRSWRERVPSRRNSK*KHCEAGESKHRGEQ Trigger: CTGCTCTCCTCTGTGCTTACTCTCTCCTGCCTCACAATGTTTGCACTTACTGTTTCTTCTGCTTGGAACTCTTTCCCTCCAAGACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CCA 90 bp | GACAATTTCAGCCTCCTGCGCATCAGTTCTCTCTCATCTGTGAAATaGAGACAATCCTTCTATCTTAGGGCTGCAACACAAGGATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: DNFSLLRISSLSSVK*RQSFYLRAATQGSS Trigger: ACTGGATCCTTGTGTTGCAGCCCTAAGATAGAAGGATTGTCTCCATTTCACAGATGAGAGAGAACTGATGCGCAGGAGGCTGAAATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS TCA 90 bp | TTACTTTTTGAAAGGATTACTCTGGAAGCTGTGTGCAGAAGAGTCTaGAGGCAGGGTTGGAACTTACTGGGAAATGACGAGAACAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLFERITLEAVCRRV*RQGWNLLGNDENRE Trigger: CTCCCTGTTCTCGTCATTTCCCAGTAAGTTCCAACCCTGCCTTCAGACTCTTCTGCACACAGCTTCCAGAGTAATCCTTTCAAAAAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CCA 90 bp | TGGCATTTTCAAAGCACACTATCGTTTTCTTGCTGGATTGATGTCTaGCAAGCTTGCCTGATAACTGGCCTGGGTGTACTTCCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: WHFQSTLSFSCWIDV*QACLITGLGVLPSL Trigger: CAAAGAAGGAAGTACACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTGAAAATGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS TCA 90 bp | AAGCAGGATGTCTTAGAGGCAGTGGATTCTCAGCATACACAACTCTaGGAGTCAGCAGAGAAGTCTAATTTAAAGATGAGTGATGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: KQDVLEAVDSQHTQL*ESAEKSNLKMSDGE Trigger: CTCTCCATCACTCATCTTTAAATTAGACTTCTCTGCTGACTCTCAGAGTTGTGTATGCTGAGAATCCACTGCCTCTAAGACATCCTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS GCA 90 bp | CGATTATTTTCAAATTCTCTACAGATGACGCACCTCCTTAGGTCCTaGTCCCAGTCACCATTGAATCAGAATGCCACTGGATTAAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: RLFSNSLQMTHLLRS*SQSPLNQNATGLKS Trigger: ACTCTTTAATCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGAATTTGAAAATAATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 90 bp | CAAAGCACACTATCGTTTTCTTGCTGGATTGATGTCTGGCAAGCTTaGCTGATAACTGGCCTGGGTGTACTTCCTTCTTTGATTTGTATA | + |
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Preference number: 5 (lower is better) Translates to: QSTLSFSCWIDVWQA*LITGLGVLPSLICI Trigger: TATACAAATCAAAGAAGGAAGTACACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS GCA 90 bp | ATGATTTATTGCTCAAGTCTCCCTATGAGAAAGAGGGCTACAGTATaGCAACATCACCCCTTTCTGTCTTTGTCATGGGAATGGAATGTC | + |
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Preference number: 5 (lower is better) Translates to: MIYCSSLPMRKRATV*QHHPFLSLSWEWNV Trigger: GACATTCCATTCCCATGACAAAGACAGAAAGGGGTGATGTTGGCATACTGTAGCCCTCTTTCTCATAGGGAGACTTGAGCAATAAATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS TCA 72 bp | CCTAAACCTCACGGCCCACACCCAGTCTCTCCGACGTaGAGGGACGCTGTCCTAGGGGCGCCGGGGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PKPHGPHPVSPT*RDAVLGAPGSP Trigger: TGGGCTCCCCGGCGCCCCTAGGACAGCGTCCCTTCACGTCGGAGAGACTGGGTGTGGGCCGTGAGGTTTAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS CAA 72 bp | GCGGCATTCAGGAAAATTCGGCGATGCGTGCCACCGTaGGGTGCGCGCCCCGTCCCTCTAGTGCCAGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AAFRKIRRCVPP*GARPVPLVPGG Trigger: CCCACCTGGCACTAGAGGGACGGGGCGCGCACCCAACGGTGGCACGCATCGCCGAATTTTCCTGAATGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS GCA 72 bp | GAATGTGCCACAGCGGCATTCAGGAAAATTCGGCGATaGGTGCCACCGTTGGGTGCGCGCCCCGTCCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: ECATAAFRKIRR*VPPLGARPVPL Trigger: TAGAGGGACGGGGCGCGCACCCAACGGTGGCACGCATCGCCGAATTTTCCTGAATGCCGCTGTGGCACATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS TCA 72 bp | ATGGTTAGGGAGGGAGCCGTCACTAAGGTGACAACGTaGGTAAAGATCTTGGAGGGAGGCCGGGCGCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: MVREGAVTKVTT*VKILEGGRARW Trigger: CCACCGCGCCCGGCCTCCCTCCAAGATCTTTACTCACGTTGTCACCTTAGTGACGGCTCCCTCCCTAACCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS TCA 72 bp | AGCCGCCTCTGCCATCTGCCAAGGACCCACGCGGCCTaGGTGATTTACCCATTCCCGGCAATGGCGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: SRLCHLPRTHAA*VIYPFPAMARF Trigger: AAATCTCGCCATTGCCGGGAATGGGTAAATCACTCAGGCCGCGTGGGTCCTTGGCAGATGGCAGAGGCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS TCA 72 bp | GAAGCAGCTGCGGAGAAGAGACCGTGCGTCCTGATCTaGAGATGGGAAGCGAGAGGTCCCTCCAGGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: EAAAEKRPCVLI*RWEARGPSRKE Trigger: TTCCTTCCTGGAGGGACCTCTCGCTTCCCATCTTCAGATCAGGACGCACGGTCTCTTCTCCGCAGCTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS TCA 72 bp | AGATCTAAGCTAAGCCGCCACAGCGAGGGACCACATTaGGAAGATCGGAGCCTGCCTGGCCGTTGTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RSKLSRHSEGPH*EDRSLPGRCEP Trigger: AGGCTCACAACGGCCAGGCAGGCTCCGATCTTCTCAATGTGGTCCCTCGCTGTGGCGGCTTAGCTTAGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669998.1 |
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| CDS TCA 72 bp | GCCTCTGCCATCTGCCAAGGACCCACGCGGCCTGAGTaGTTTACCCATTCCCGGCAATGGCGAGATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ASAICQGPTRPE*FTHSRQWRDFF Trigger: AAAGAAATCTCGCCATTGCCGGGAATGGGTAAATCACTCAGGCCGCGTGGGTCCTTGGCAGATGGCAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS CCA 72 bp | GTTCTGTGCTTTCGGACTCCAGCCAAGAGCCAAAGGTaGGTTGGACAAGGGGAGGGCAATAGTGGTGACGAG | + |
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Preference number: 6 (lower is better) Translates to: VLCFRTPAKSQR*VGQGEGNSGDE Trigger: CTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGAAAGCACAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS CAA 72 bp | AGACTCACCGGACTCCAGCCAAGAGCCAAAGGTGGGTaGGACAAGGGGAGGGCAATAGTGGTGACGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: RLTGLQPRAKGG*DKGRAIVVTRS Trigger: ACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGGTGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CAA 72 bp | TGTGCTTTCGGACTCCAGCCAAGAGCCAAAGGTGGGTaGGACAAGGGGAGGGCAATAGTGGTGACGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: CAFGLQPRAKGG*DKGRAIVVTRS Trigger: ACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGAAAGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS TCA 72 bp | AAGGGCTGGCTGGTCCTGTCAACTCCGATAAACAGGTaGAACACTGGCCAGGTGTTCCTGGAACTGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: KGWLVLSTPINR*NTGQVFLELGS Trigger: AGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGCCAGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS CCA 72 bp | TCAAGCAAGAGGATAAGTAAAGTTCTAACAGTGTGCTaGGGGACAGCCCTTACCACCACCACAGCCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SSKRISKVLTVC*GTALTTTTARQ Trigger: CTGGCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS CAA 72 bp | TTTCTGTTCGGACTCCAGCCAAGAGCCAAAGGTGGGTaGGACAAGGGGAGGGCAATAGTGGTGACGAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FLFGLQPRAKGG*DKGRAIVVTRS Trigger: ACTTCTCGTCACCACTATTGCCCTCCCCTTGTCCAACCCACCTTTGGCTCTTGGCTGGAGTCCGAACAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670959.1 |
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| CDS TCA 72 bp | ATGCTGAGCTGCTTCTTGGAAACATTCGCAAGAGGGTaGCAGTCTTCCCTCCAGATCCCTTCTTCGTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: MLSCFLETFARG*QSSLQIPSSSP Trigger: TGGGGACGAAGAAGGGATCTGGAGGGAAGACTGTCACCCTCTTGCGAATGTTTCCAAGAAGCAGCTCAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS TCA 72 bp | AAGAGTCTGAAGGCAGGGTTGGAACTTACTGGGAAATaGCGAGAACAGGGAGAGCCAGCTAGGAGACTCACC | + |
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Preference number: 6 (lower is better) Translates to: KSLKAGLELTGK*REQGEPARRLT Trigger: GGTGAGTCTCCTAGCTGGCTCTCCCTGTTCTCGTCATTTCCCAGTAAGTTCCAACCCTGCCTTCAGACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS TCA 72 bp | GCACACACCATGTGGCAGACACGAGGGACACAGTGGTaGACAAAACAGACAAAATATACTGCCCTCGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: AHTMWQTRGTQW*TKQTKYTALAE Trigger: CTCCGCGAGGGCAGTATATTTTGTCTGTTTTGTTCACCACTGTGTCCCTCGTGTCTGCCACATGGTGTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 72 bp | GGATCCAGTAATATAACCAGGCACAGAGCAGGACGCTaGAGCGATACTCCCTCCCTTATCTTCTGGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GSSNITRHRAGR*SDTPSLIFWVE Trigger: TTCCACCCAGAAGATAAGGGAGGGAGTATCGCTGCAGCGTCCTGCTCTGTGCCTGGTTATATTACTGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS GCA 72 bp | ACTTCAAGCAAGAGGATAAGTAAAGTTCTAACAGTGTaGTGGGGGACAGCCCTTACCACCACCACAGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: TSSKRISKVLTV*WGTALTTTTAR Trigger: GCGGGCTGTGGTGGTGGTAAGGGCTGTCCCCCAGCACACTGTTAGAACTTTACTTATCCTCTTGCTTGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS CCA 72 bp | GCTGGTCCTGTCAACTCCGATAAACAGGTGAAACACTaGCCAGGTGTTCCTGGAACTGGGATCTCCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AGPVNSDKQVKH*PGVPGTGISPF Trigger: AAAAGGGGAGATCCCAGTTCCAGGAACACCTGGCCAGTGTTTCACCTGTTTATCGGAGTTGACAGGACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 ENST00000654752.1 ENST00000660996.1 ENST00000670716.1 ENST00000670959.1 |
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| CDS CCA 72 bp | CATTGGGAATGGCTCCTTGCTTTTAGGGACCCTGTCTaGGACTGTAACCACAGCTTCCTGAATGGTCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HWEWLLAFRDPV*DCNHSFLNGLQ Trigger: CTGGAGACCATTCAGGAAGCTGTGGTTACAGTCCCAGACAGGGTCCCTAAAAGCAAGGAGCCATTCCCAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS TCA 72 bp | GACATGGACCACATGGTCCTTTGGAATGAATGTGGCTaGCAGAGTGAGACGGGAGGGAAAAGATGGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: DMDHMVLWNECG*QSETGGKRWDL Trigger: CAGATCCCATCTTTTCCCTCCCGTCTCACTCTGTCAGCCACATTCATTCCAAAGGACCATGTGGTCCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 72 bp | TGGAAACGATGCCTCAGTCGAAGGGAGATAGGAACCTaGCAAGCAGGATGTCTTAGAGGCAGTGGATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: WKRCLSRREIGT*QAGCLRGSGFS Trigger: TGAGAATCCACTGCCTCTAAGACATCCTGCTTGGCAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS CAA 72 bp | ATGACGCACCTCCTTAGGTCCTGCTCCCAGTCACCATaGAATCAGAATGCCACTGGATTAAAGAGTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: MTHLLRSCSQSP*NQNATGLKSDR Trigger: CCTGTCACTCTTTAATCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CAA 90 bp | TCTCTACAGATGACGCACCTCCTTAGGTCCTGCTCCCAGTCACCATaGAATCAGAATGCCACTGGATTAAAGAGTGACAGGTCAAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLQMTHLLRSCSQSP*NQNATGLKSDRSKG Trigger: TCCCTTTGACCTGTCACTCTTTAATCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 72 bp | AATAGTGGTGACGAGAAGTGTCTGATTTGGAAACGATaGCTCAGTCGAAGGGAGATAGGAACCTGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: NSGDEKCLIWKR*LSRREIGTCQA Trigger: TGCTTGGCAGGTTCCTATCTCCCTTCGACTGAGGCATCGTTTCCAAATCAGACACTTCTCGTCACCACTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS GCA 72 bp | TCAAATTCTCTACAGATGACGCACCTCCTTAGGTCCTaGTCCCAGTCACCATTGAATCAGAATGCCACTGGA | + |
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Preference number: 6 (lower is better) Translates to: SNSLQMTHLLRS*SQSPLNQNATG Trigger: TCCAGTGGCATTCTGATTCAATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGAATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 72 bp | TGCTCAAGTCTCCCTATGAGAAAGAGGGCTACAGTATaGCAACATCACCCCTTTCTGTCTTTGTCATGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CSSLPMRKRATV*QHHPFLSLSWE Trigger: TTCCCATGACAAAGACAGAAAGGGGTGATGTTGGCATACTGTAGCCCTCTTTCTCATAGGGAGACTTGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000669998.1 ENST00000670716.1 |
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| CDS CCA 72 bp | AGCCTCCTGCGCATCAGTTCTCTCTCATCTGTGAAATaGAGACAATCCTTCTATCTTAGGGCTGCAACACAA | + |
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Preference number: 6 (lower is better) Translates to: SLLRISSLSSVK*RQSFYLRAATQ Trigger: TTGTGTTGCAGCCCTAAGATAGAAGGATTGTCTCCATTTCACAGATGAGAGAGAACTGATGCGCAGGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS CCA 72 bp | CAAAGCACACTATCGTTTTCTTGCTGGATTGATGTCTaGCAAGCTTGCCTGATAACTGGCCTGGGTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: QSTLSFSCWIDV*QACLITGLGVL Trigger: AAGTACACCCAGGCCAGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS CAA 72 bp | GTGATTTACCCATTCCCGGCAATGGCGAGATTTCTTTaGATTTCCTCCAACGTGCCACGTTCTGTGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VIYPFPAMARFL*ISSNVPRSVLS Trigger: AGAAAGCACAGAACGTGGCACGTTGGAGGAAATCAAAAGAAATCTCGCCATTGCCGGGAATGGGTAAATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000456816.6 ENST00000659219.1 ENST00000670716.1 |
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| CDS TCA 72 bp | ATTTCAGCCTCCTGCGCATCAGTTCTCTCTCATCTGTaGAATGGAGACAATCCTTCTATCTTAGGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: ISASCASVLSHL*NGDNPSILGLQ Trigger: TTGCAGCCCTAAGATAGAAGGATTGTCTCCATTTCACAGATGAGAGAGAACTGATGCGCAGGAGGCTGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000456816.6 |
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| CDS CAA 72 bp | GAGACGGGAGGGAAAAGATGGGATCTGACTTACTTTTaGAAAGGATTACTCTGGAAGCTGTGTGCAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: ETGGKRWDLTYF*KGLLWKLCAEE Trigger: CTCTTCTGCACACAGCTTCCAGAGTAATCCTTTCAAAAAGTAAGTCAGATCCCATCTTTTCCCTCCCGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS TCA 72 bp | TTACTAAGCACTGACATTTTGAAGGGTAAATTCTGGTaGACGACACCCACTCATCCCTCTGACTCCTACTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSTDILKGKFW*TTPTHPSDSYS Trigger: AGAGTAGGAGTCAGAGGGATGAGTGGGTGTCGTTCACCAGAATTTACCCTTCAAAATGTCAGTGCTTAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS TCA 72 bp | TTCTGTTTCATTGTTGGACCTTTAGCAAACACTTACTaGTTTCCTCCAACGTGCCACGTTCTGTGCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: FCFIVGPLANTY*FPPTCHVLCFR Trigger: CCGAAAGCACAGAACGTGGCACGTTGGAGGAAATCAGTAAGTGTTTGCTAAAGGTCCAACAATGAAACAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS TCA 72 bp | CCACTTCCATCCTCTCAGATAAGATCATTTCACTCCTaGGAGAGGATCTTCCTTCTCCTAAAGCCTCCTAAA | + |
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Preference number: 6 (lower is better) Translates to: PLPSSQIRSFHS*ERIFLLLKPPK Trigger: TTTAGGAGGCTTTAGGAGAAGGAAGATCCTCTCTCAGGAGTGAAATGATCTTATCTGAGAGGATGGAAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS TCA 72 bp | TCTTTGTTCAGTGATAGACTTAAGACATTTAAGAGCTaGGAGGGAGCGGAACACGAATCCCCTCAACCCATT | + |
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Preference number: 6 (lower is better) Translates to: SLFSDRLKTFKS*EGAEHESPQPI Trigger: AATGGGTTGAGGGGATTCGTGTTCCGCTCCCTCTCAGCTCTTAAATGTCTTAAGTCTATCACTGAACAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670716.1 |
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| CDS TCA 72 bp | TTCTGTTTCATTGTTGGACCTTTAGCAAACACTTACTaGTTTCCTCCAACGTGCCACGTTCTGTGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: FCFIVGPLANTY*FPPTCHVLCFL Trigger: GAGAAAGCACAGAACGTGGCACGTTGGAGGAAATCAGTAAGTGTTTGCTAAAGGTCCAACAATGAAACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397644.2 ENST00000654752.1 |
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| CDS GCA 72 bp | AGGGACACAGTGGTGAACAAAACAGACAAAATATACTaGCCTCGCGGAGCTTATATTCTAGTGCATGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: RDTVVNKTDKIY*PRGAYILVHGN Trigger: ATTTCCATGCACTAGAATATAAGCTCCGCGAGGGCAGTATATTTTGTCTGTTTTGTTCACCACTGTGTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS GCA 72 bp | CGGATTTGGCATTTTCAAAGCACACTATCGTTTTCTTaGTGGATTGATGTCTGGCAAGCTTGCCTGATAACT | + |
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Preference number: 6 (lower is better) Translates to: RIWHFQSTLSFS*WIDVWQACLIT Trigger: AGTTATCAGGCAAGCTTGCCAGACATCAATCCAGCAAGAAAACGATAGTGTGCTTTGAAAATGCCAAATCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429578.5 |
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| CDS CAA 72 bp | TTTCCTCCAACGTGCCACGTTCTGTGCTTTCTGTTCTaGAAGCCACATTCAGTAGAAGATACAAACATGGAA | + |
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Preference number: 6 (lower is better) Translates to: FPPTCHVLCFLF*KPHSVEDTNME Trigger: TTCCATGTTTGTATCTTCTACTGAATGTGGCTTCAAGAACAGAAAGCACAGAACGTGGCACGTTGGAGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000414120.1 ENST00000659219.1 |
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| CDS TCA 72 bp | GTCTTAGAGGCAGTGGATTCTCAGCATACACAACTCTaGGAGTCAGCAGAGAAGTCTAATTTAAAGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: VLEAVDSQHTQL*ESAEKSNLKMS Trigger: ACTCATCTTTAAATTAGACTTCTCTGCTGACTCTCAGAGTTGTGTATGCTGAGAATCCACTGCCTCTAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS TCA 72 bp | AGTTTATTTCACGATTATTTTCAAATTCTCTACAGATaGCGCACCTCCTTAGGTCCTGCTCCCAGTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: SLFHDYFQILYR*RTSLGPAPSHH Trigger: ATGGTGACTGGGAGCAGGACCTAAGGAGGTGCGTCATCTGTAGAGAATTTGAAAATAATCGTGAAATAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000414120.1 |
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| CDS CAA 90 bp | GCAGAGAAGTCTAATTTAAAGATGAGTGATGGAGAGTTCCAAGGATaGAGCCTTGATGTTCTTTGTCATTCCTTCGCAGGAATCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: AEKSNLKMSDGEFQG*SLDVLCHSFAGISK Trigger: CTTTGAGATTCCTGCGAAGGAATGACAAAGAACATCAAGGCTCAATCCTTGGAACTCTCCATCACTCATCTTTAAATTAGACTTCTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS CAA 90 bp | CTGATTAGCATTCAAAAGCATCACCACAATACCTCTCATACTCTTTaGACGCGGCATAGCACTGGATATATCTGTTCTGTTTCATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: LISIQKHHHNTSHTL*TRHSTGYICSVSLL Trigger: CAACAATGAAACAGAACAGATATATCCAGTGCTATGCCGCGTCAAAAGAGTATGAGAGGTATTGTGGTGATGCTTTTGAATGCTAATCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000414120.1 ENST00000654752.1 ENST00000660996.1 ENST00000670959.1 |
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| CDS TCA 72 bp | CCTTGGGCTTCTGGAGCTTTAAGGAACAAAGTTAAGTaGCACATCCCGTTACAGAAAAAGGTATATTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PWASGALRNKVK*HIPLQKKVYSV Trigger: TACAGAATATACCTTTTTCTGTAACGGGATGTGTCACTTAACTTTGTTCCTTAAAGCTCCAGAAGCCCAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000414120.1 ENST00000654752.1 ENST00000660996.1 ENST00000670959.1 |
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| CDS CAA 72 bp | ATTCAAAAGCATCACCACAATACCTCTCATACTCTTTaGACGCGGCATAGCACTGGATATATCTGTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: IQKHHHNTSHTL*TRHSTGYICSV Trigger: AACAGAACAGATATATCCAGTGCTATGCCGCGTCAAAAGAGTATGAGAGGTATTGTGGTGATGCTTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000397644.2 ENST00000414120.1 ENST00000654752.1 ENST00000660996.1 ENST00000670959.1 |
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| CDS CAA 72 bp | TCTAATTTAAAGATGAGTGATGGAGAGTTCCAAGGATaGAGCCTTGATGTTCTTTGTCATTCCTTCGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SNLKMSDGEFQG*SLDVLCHSFAG Trigger: TCCTGCGAAGGAATGACAAAGAACATCAAGGCTCAATCCTTGGAACTCTCCATCACTCATCTTTAAATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000414120.1 ENST00000429578.5 ENST00000670959.1 |
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| CDS CAA 72 bp | TTTTACAGGCTCTCAACATTGATAATACTTGAATCATaGTGGGTGACCTTGGGCTTCTGGAGCTTTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: FYRLSTLIILES*WVTLGFWSFKE Trigger: TTCCTTAAAGCTCCAGAAGCCCAAGGTCACCCACAATGATTCAAGTATTATCAATGTTGAGAGCCTGTAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000414120.1 ENST00000654752.1 ENST00000660996.1 ENST00000670959.1 |
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