Pregenerated sensors for LINC00877 (Homo sapiens)
Ensembl gene IDs: ENSG00000241163Ensembl transcript IDs: ENST00000462492.5, ENST00000464271.1, ENST00000468646.6, ENST00000469218.6, ENST00000470712.2, ENST00000481148.5, ENST00000488545.2, ENST00000498432.6, ENST00000608654.6, ENST00000626474.3, ENST00000656335.1, ENST00000658297.1, ENST00000660632.1, ENST00000661666.1, ENST00000662591.1, ENST00000664410.1, ENST00000664517.1, ENST00000665453.1, ENST00000666244.1, ENST00000668168.1, ENST00000668763.1, ENST00000671527.1
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCCTCTCAGCCAGTGCATATGTGAAGCCCAGAAATGCAGGGCAGTaGAAGCCCTCACAGGCAGCTCCGGTTCTGTGGGGCCTGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALSASAYVKPRNAGQ*KPSQAAPVLWGLGA Trigger: AGCTCCCAGGCCCCACAGAACCGGAGCTGCCTGTGAGGGCTTTCACTGCCCTGCATTTCTGGGCTTCACATATGCACTGGCTGAGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 90 bp | CAGGGCAGTGAAAGCCCTCACAGGCAGCTCCGGTTCTGTGGGGCCTaGGAGCTGATGGACAGATACTGCCCAGTGAATGGCTCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGSESPHRQLRFCGA*ELMDRYCPVNGSRH Trigger: ATGCCTGGAGCCATTCACTGGGCAGTATCTGTCCATCAGCTCCCAGGCCCCACAGAACCGGAGCTGCCTGTGAGGGCTTTCACTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 90 bp | CAGGGATGCAGGATCAGCCAAGCCTTGGGCAGCCCATCAGGTTGCTaGGAGCATGTCCTGAGTCTCCCATGGGATGAATGGCCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QGCRISQALGSPSGC*EHVLSLPWDEWPGF Trigger: GAAGCCTGGCCATTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCTGATGGGCTGCCCAAGGCTTGGCTGATCCTGCATCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | AGGCAGCTCCGGTTCTGTGGGGCCTGGGAGCTGATGGACAGATACTaGCCAGTGAATGGCTCCAGGCATCTTGTACCCATCTCAGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQLRFCGAWELMDRY*PVNGSRHLVPISEV Trigger: GACCTCTGAGATGGGTACAAGATGCCTGGAGCCATTCACTGGGCAGTATCTGTCCATCAGCTCCCAGGCCCCACAGAACCGGAGCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | AAGACAGGGAGCCCTCTCAGCCAGTGCATATGTGAAGCCCAGAAATaGAGGGCAGTGAAAGCCCTCACAGGCAGCTCCGGTTCTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KTGSPLSQCICEAQK*RAVKALTGSSGSVG Trigger: CCCCACAGAACCGGAGCTGCCTGTGAGGGCTTTCACTGCCCTGCATTTCTGGGCTTCACATATGCACTGGCTGAGAGGGCTCCCTGTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 90 bp | CCCTGCTCCCTCGCTCCGAGTCCTGAGACCAGCTCTGCCACAGGTTaGGTTCTCTGCAAGGAGACTCTGAGATGGAATATGGGGTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PCSLAPSPETSSATG*VLCKETLRWNMGCK Trigger: CTTGCACCCCATATTCCATCTCAGAGTCTCCTTGCAGAGAACCCAACCTGTGGCAGAGCTGGTCTCAGGACTCGGAGCGAGGGAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 90 bp | TGGCAGCGCTACTGCCTGAGCCATGGTGCTGAGGCAGGGAGGGAATaGGAAAGGATTAACCCCACCTACCTCTTCTCCCACCCTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WQRYCLSHGAEAGRE*ERINPTYLFSHPQN Trigger: GTTCTGAGGGTGGGAGAAGAGGTAGGTGGGGTTAATCCTTTCCCATTCCCTCCCTGCCTCAGCACCATGGCTCAGGCAGTAGCGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | CTCAGACTCTCGCAACAGCATGCCACCTCAAGTGCACCCACTTTCTaGTCAGGATCGTCCTTGAAGACAGGGAGCCCTCTCAGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRLSQQHATSSAPTF*SGSSLKTGSPLSQC Trigger: GCACTGGCTGAGAGGGCTCCCTGTCTTCAAGGACGATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCTGTTGCGAGAGTCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 90 bp | CACTCAGACACCAGCAACCATGGGAAGCCCTTATGTTCCTCAGCCTaGAGGGACAAGGGGAGCAGGGCCATAACTCTGATCCCAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSDTSNHGKPLCSSA*RDKGSRAITLIPGG Trigger: TCCTCCTGGGATCAGAGTTATGGCCCTGCTCCCCTTGTCCCTTCAGGCTGAGGAACATAAGGGCTTCCCATGGTTGCTGGTGTCTGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | CAGCTTTTCTTGGAGCCATGGTATGTCTTCCCTGGCAGCAGCTTCTaGCACACAGACCTGCCATGGCTTCAGCCTCCTCTGGATGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QLFLEPWYVFPGSSF*HTDLPWLQPPLDDS Trigger: GGAGTCATCCAGAGGAGGCTGAAGCCATGGCAGGTCTGTGTGGCAGAAGCTGCTGCCAGGGAAGACATACCATGGCTCCAAGAAAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS CCA 90 bp | AAGGAACCAGCAAGGGAGGTTGAGGCACTCAGACACCAGCAACCATaGGAAGCCCTTATGTTCCTCAGCCTGAAGGGACAAGGGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KEPAREVEALRHQQP*EALMFLSLKGQGEQ Trigger: CTGCTCCCCTTGTCCCTTCAGGCTGAGGAACATAAGGGCTTCCCATGGTTGCTGGTGTCTGAGTGCCTCAACCTCCCTTGCTGGTTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 90 bp | GATGTGGGCAGCCTAGGAGGGCGTGTTCCATGCTGTCTCTGTAGTTaGGGCAAATCCTTGTTCATCACCGGCTTTCCTTCTCGTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DVGSLGGRVPCCLCS*GKSLFITGFPSRAS Trigger: GGAGGCACGAGAAGGAAAGCCGGTGATGAACAAGGATTTGCCTCAACTACAGAGACAGCATGGAACACGCCCTCCTAGGCTGCCCACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 90 bp | AGCATGCCACCTCAAGTGCACCCACTTTCTGCTCAGGATCGTCCTTaGAGACAGGGAGCCCTCTCAGCCAGTGCATATGTGAAGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SMPPQVHPLSAQDRP*RQGALSASAYVKPR Trigger: TCTGGGCTTCACATATGCACTGGCTGAGAGGGCTCCCTGTCTTCAAGGACGATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | TTCTGCTCAGGATCGTCCTTGAAGACAGGGAGCCCTCTCAGCCAGTaGATATGTGAAGCCCAGAAATGCAGGGCAGTGAAAGCCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FCSGSSLKTGSPLSQ*ICEAQKCRAVKALT Trigger: TGTGAGGGCTTTCACTGCCCTGCATTTCTGGGCTTCACATATGCACTGGCTGAGAGGGCTCCCTGTCTTCAAGGACGATCCTGAGCAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | CCCCCTGGGTCTGCTTCTCATAAAGCTCAGACTCTCGCAACAGCATaGCACCTCAAGTGCACCCACTTTCTGCTCAGGATCGTCCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPGSASHKAQTLATA*HLKCTHFLLRIVLE Trigger: TTCAAGGACGATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCTGTTGCGAGAGTCTGAGCTTTATGAGAAGCAGACCCAGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 90 bp | GCCAATCAGACAGAAGGACTGAGGCTCTTCTGCAGCCAGAGAATTTaGTTTAGCCACTGTCTGACCATGCAGACCCATGTGGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANQTEGLRLFCSQRI*FSHCLTMQTHVGHS Trigger: GCTGTGGCCCACATGGGTCTGCATGGTCAGACAGTGGCTAAAGCAAATTCTCTGGCTGCAGAAGAGCCTCAGTCCTTCTGTCTGATTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CCA 90 bp | TTTCTCCCCCACACTTTCTGTCTCTGGCAGCTTTTCTTGGAGCCATaGTATGTCTTCCCTGGCAGCAGCTTCTGCCACACAGACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLPHTFCLWQLFLEP*YVFPGSSFCHTDLP Trigger: TGGCAGGTCTGTGTGGCAGAAGCTGCTGCCAGGGAAGACATACCATGGCTCCAAGAAAAGCTGCCAGAGACAGAAAGTGTGGGGGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS GCA 90 bp | AGCTTGACATTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTGCTaGAGGCCAAGGACAACAGCACTGGACATTCACCTTGGACCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTFALQVLDPCSSC*RPRTTALDIHLGPW Trigger: CCAAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | CTGAGCTTGACATTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTaGTGCAGGCCAAGGACAACAGCACTGGACATTCACCTTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LSLTFALQVLDPCSS*CRPRTTALDIHLGP Trigger: AGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | AGCTTGACATTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTGCTaGAGGCCAAGGACAACAGCACTGGACATTCACCTTGGACCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SLTFALQVLDPCSSC*RPRTTALDIHLGPG Trigger: ACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CCA 90 bp | CTCCTCCTGCTGCAGGCCAAGGACAACAGCACTGGACATTCACCTTaGACCTGGTCATTCACTTCAATCTTGGGCTCCTTTTTGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLQAKDNSTGHSP*TWSFTSILGSFLPG Trigger: TCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS TCA 90 bp | CATCAGCAAGGAGGCACTTCTTGCAGTCTACCCTGCAGTCTCAGCTaGTACAATAGAAGTCAGCTCCTGTGTTCTCAGCCTGCACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HQQGGTSCSLPCSLS*YNRSQLLCSQPAHP Trigger: GGGATGTGCAGGCTGAGAACACAGGAGCTGACTTCTATTGTATCAGCTGAGACTGCAGGGTAGACTGCAAGAAGTGCCTCCTTGCTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481148.5 |
||
| CDS TCA 90 bp | ACCAGCAGAAGCGGGAAGGTCTCTTTGACCCCAACCCTTCTCCCCTaGAGCACACCATCAAACATCATAGAATCCTCTGACCTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSRSGKVSLTPTLLP*STPSNIIESSDLLL Trigger: CAGCAGAAGGTCAGAGGATTCTATGATGTTTGATGGTGTGCTTCAGGGGAGAAGGGTTGGGGTCAAAGAGACCTTCCCGCTTCTGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS GCA 90 bp | CCTACTGTGGCAAATCCCTGGGTTACCTCACAGTTCCCTCTTGTTTaGCTCCCAGCCCCTTCCTTCATCTGTGCAATCAGCTCCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: PTVANPWVTSQFPLV*LPAPSFICAISSLH Trigger: ATGTAAGGAGCTGATTGCACAGATGAAGGAAGGGGCTGGGAGGCAAACAAGAGGGAACTGTGAGGTAACCCAGGGATTTGCCACAGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS TCA 90 bp | TTGAGAAGCGCTGCTCTAGGCTTCTCCCTCTACCCCTGTCCCTCCTaGTTGCATTTGAACTGGTGCACCTGGTCATTCACTTCAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSAALGFSLYPCPS*LHLNWCTWSFTSIL Trigger: CAAGATTGAAGTGAATGACCAGGTGCACCAGTTCAAATGCAATCAGGAGGGACAGGGGTAGAGGGAGAAGCCTAGAGCAGCGCTTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | CCAAACCTTTGGCTTTTGCCAGATGTAGATGACACTTGCATTATCTaGTTCTGTCTCTGGGAGTTCCACATGGCCGGGGAAGAGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNLWLLPDVDDTCII*FCLWEFHMAGEEAS Trigger: TGAGGCCTCTTCCCCGGCCATGTGGAACTCCCAGAGACAGAAGCAGATAATGCAAGTGTCATCTACATCTGGCAAAAGCCAAAGGTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | GTCTTTCTTCTGAGCTTGACATTTGCTCTCCAAGTCTTAGATCCCTaGTCCTCCTGCTGCAGGCCAAGGACAACAGCACTGGACATTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLSLTFALQVLDP*SSCCRPRTTALDIH Trigger: GTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCTCAGAAGAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | GGGTTTTGTCCCCAAACTTCCAGTCTTTCTTCTGAGCTTGACATTTaGTCTCCAAGTCTTAGATCCCTGCTCCTCCTGCTGCAGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GFCPQTSSLSSELDI*SPSLRSLLLLLQAK Trigger: CTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCTCAGAAGAAAGACTGGAAGTTTGGGGACAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | GATGCAGGAGCTGGGCCAGGTGTGTGTGTTCAGATCTGGAACAAATaGCCAACCTCTGTAGGATGCCCTCACCACAAAGAACATGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: DAGAGPGVCVQIWNK*PTSVGCPHHKEHEF Trigger: AAACTCATGTTCTTTGTGGTGAGGGCATCCTACAGAGGTTGGGCATTTGTTCCAGATCTGAACACACACACCTGGCCCAGCTCCTGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CCA 90 bp | CTGCTGCAGGCCAAGGACAACAGCACTGGACATTCACCTTGGACCTaGTCATTCACTTCAATCTTGGGCTCCTTTTTGCCTGGATTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLQAKDNSTGHSPWT*SFTSILGSFLPGFL Trigger: AAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS TCA 90 bp | GTGAGCAAGAGAGGAGAGCAGAAGCCAATGCAACTCCTTAGCTGGTaGAATGCAACCAGAGAAAGAGAGAGAGACAGCCCAATTCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSKRGEQKPMQLLSW*NATRERERDSPIPV Trigger: GACTGGAATTGGGCTGTCTCTCTCTCTTTCTCTGGTTGCATTTCACCAGCTAAGGAGTTGCATTGGCTTCTGCTCTCCTCTCTTGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656335.1 |
||
| CDS GCA 90 bp | TGTTTGTCCATTTCTCAGCTCTGCTTTCCACTGTGTTGGCTCCATTaGAGACAAACTCTTCCAAGGGAGGGTAGTGAGGAGGTCCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSISQLCFPLCWLH*RQTLPREGSEEVLS Trigger: ACTGAGGACCTCCTCACTACCCTCCCTTGGAAGAGTTTGTCTGCAATGGAGCCAACACAGTGGAAAGCAGAGCTGAGAAATGGACAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 90 bp | CACATGCTTCGTTTTCAAGGGAGGAAGTCATCTCTGTCGCTCCTCTaGCTCTTTCTTTGGGACTTAAAACAGTGCCTGCCGTGTAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HMLRFQGRKSSLSLL*LFLWDLKQCLPCKE Trigger: CTCCTTACACGGCAGGCACTGTTTTAAGTCCCAAAGAAAGAGGCAGAGGAGCGACAGAGATGACTTCCTCCCTTGAAAACGAAGCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000468646.6 ENST00000626474.3 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 90 bp | ACCCAGCCAGAGGGATCCATCACACTGGAGAGGATTAGGACTGTGTaGCAGGAATGCAGAGAGGAAGAAAGAGCTGATGTTCAGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TQPEGSITLERIRTV*QECREEERADVQIS Trigger: TGAAATCTGAACATCAGCTCTTTCTTCCTCTCTGCATTCCTGCCACACAGTCCTAATCCTCTCCAGTGTGATGGATCCCTCTGGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668763.1 |
||
| CDS TCA 90 bp | GTGAGCAAGAGAGGAGAGCAGAAGCCAATGCAACTCCTTAGCTGGTaGAATGCAACCAGAGAAAGAGAGAGAGACAGCCCAATTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSKRGEQKPMQLLSW*NATRERERDSPIQF Trigger: GAACTGAATTGGGCTGTCTCTCTCTCTTTCTCTGGTTGCATTTCACCAGCTAAGGAGTTGCATTGGCTTCTGCTCTCCTCTCTTGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469218.6 ENST00000658297.1 |
||
| CDS TCA 90 bp | GTGAGCAAGAGAGGAGAGCAGAAGCCAATGCAACTCCTTAGCTGGTaGAATGCAACCAGAGAAAGAGAGAGAGACAGCCCAATTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSKRGEQKPMQLLSW*NATRERERDSPIPL Trigger: CAAAGGAATTGGGCTGTCTCTCTCTCTTTCTCTGGTTGCATTTCACCAGCTAAGGAGTTGCATTGGCTTCTGCTCTCCTCTCTTGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000626474.3 ENST00000664517.1 |
||
| CDS GCA 90 bp | GTGGGGGAAGGGTTGAGACAAGGAGTGGAATCTGTGGGGCTGAAGTaGCCTTTGGTTCAGCTTCCAACTTTCAAGTACATTGGAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGEGLRQGVESVGLK*PLVQLPTFKYIGNC Trigger: ACAATTTCCAATGTACTTGAAAGTTGGAAGCTGAACCAAAGGGCACTTCAGCCCCACAGATTCCACTCCTTGTCTCAACCCTTCCCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CCA 90 bp | ATCAGGAGTTGTTTGTCCATTTCTCAGCTCTGCTTTCCACTGTGTTaGCTCCATTGCAGACAAACTCTTCCAAGGGAGGGTAGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IRSCLSISQLCFPLC*LHCRQTLPREGSEE Trigger: CTCCTCACTACCCTCCCTTGGAAGAGTTTGTCTGCAATGGAGCCAACACAGTGGAAAGCAGAGCTGAGAAATGGACAAACAACTCCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS TCA 90 bp | ACGTGGGAATTGTGGGAGCTACAATTCAAGATGAGATTTGGGTGGTaGTACCACCAAGCCACATCAGTGGGGGTACTTACTCTTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWELWELQFKMRFGW*YHQATSVGVLTLVQ Trigger: CTGAACAAGAGTAAGTACCCCCACTGATGTGGCTTGGTGGTATCACCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCCACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS GCA 90 bp | GACCTTGGTCAAAATGCAGAATTTCAAGTTCCCGCCAGGACCTACTaGACCAGAGTCTGCATTTCACCAAGATCTCCAGGTGACTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLGQNAEFQVPARTY*TRVCISPRSPGDLN Trigger: ATTCAAGTCACCTGGAGATCTTGGTGAAATGCAGACTCTGGTGCAGTAGGTCCTGGCGGGAACTTGAAATTCTGCATTTTGACCAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS TCA 90 bp | CTAATTTTGCTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCGGAGGGACTCTGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LILLHILYDEPLHGG*FTTSTLICRRDSGV Trigger: AACCCCAGAGTCCCTCCGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAGCAAAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000462492.5 ENST00000470712.2 ENST00000608654.6 ENST00000662591.1 ENST00000665453.1 ENST00000668763.1 ENST00000671527.1 |
||
| CDS TCA 90 bp | CTAATTTTGCTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCAAGCGCCCCTTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LILLHILYDEPLHGG*FTTSTLICQAPLAR Trigger: TCTGGCAAGGGGCGCTTGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAGCAAAATTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000468646.6 ENST00000498432.6 |
||
| CDS TCA 90 bp | AACCCTTCTCCCCTGAAGCACACCATCAAACATCATAGAATCCTCTaGCCTTCTGCTGAAGTCGGTCATAAGAGCCTCATGTGGAATACA | + |
|
Preference number: 5 (lower is better) Translates to: NPSPLKHTIKHHRIL*PSAEVGHKSLMWNT Trigger: TGTATTCCACATGAGGCTCTTATGACCGACTTCAGCAGAAGGTCAGAGGATTCTATGATGTTTGATGGTGTGCTTCAGGGGAGAAGGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CCA 90 bp | TCACCATGTCAAAGACATCCAGCGACGCATTCTACACTTTTGATTTaGTTTCCCCCTTGCATGTCCCATTATGTGAAGAGAAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPCQRHPATHSTLLI*FPPCMSHYVKRRLW Trigger: CCAGAGCCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS TCA 90 bp | CTAATTTTGCTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCGGAGGGACTCTGGGGTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LILLHILYDEPLHGG*FTTSTLIGGTLGFE Trigger: CTCAAACCCCAGAGTCCCTCCGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAGCAAAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000488545.2 |
||
| CDS GCA 90 bp | CAGGATGCAAGAGGAACAGTCTCCTTGAAATGTGAGTTCACAGGCTaGCATTTGAATACTGTAATAGCCTCAGATTTGGACAGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QDARGTVSLKCEFTG*HLNTVIASDLDRLE Trigger: TTCCAGCCTGTCCAAATCTGAGGCTATTACAGTATTCAAATGGCAGCCTGTGAACTCACATTTCAAGGAGACTGTTCCTCTTGCATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CCA 90 bp | TTTCAAGGGAGGAAGTCATCTCTGTCGCTCCTCTGCCTCTTTCTTTaGGACTTAAAACAGTGCCTGCCGTGTAAGGAGATGATAAATACT | + |
|
Preference number: 5 (lower is better) Translates to: FQGRKSSLSLLCLFL*DLKQCLPCKEMINT Trigger: AGTATTTATCATCTCCTTACACGGCAGGCACTGTTTTAAGTCCCAAAGAAAGAGGCAGAGGAGCGACAGAGATGACTTCCTCCCTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000468646.6 ENST00000626474.3 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 90 bp | CAGGGTTTCTGGCACATTGTCAAAGAACATAAAGAAGATCCAGGATaGAGCAGAGCCAGCTCTGTATTAAATTCCCCAGCTTTCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QGFWHIVKEHKEDPG*SRASSVLNSPAFQH Trigger: ATGCTGGAAAGCTGGGGAATTTAATACAGAGCTGGCTCTGCTCCATCCTGGATCTTCTTTATGTTCTTTGACAATGTGCCAGAAACCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626474.3 |
||
| CDS CCA 90 bp | ACAGCACTGGACATTCACCTTGGACCTGGTCATTCACTTCAATCTTaGGCTCCTTTTTGCCTGGATTCCTTTTTCCATCTTCCAAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: TALDIHLGPGHSLQS*APFCLDSFFHLPNL Trigger: AAGGTTTGGAAGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS TCA 90 bp | CTAATTTTGCTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCAGTCCATCAGCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LILLHILYDEPLHGG*FTTSTLICQSISKE Trigger: CTCCTTGCTGATGGACTGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAGCAAAATTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481148.5 |
||
| CDS TCA 90 bp | TTCCTTTTTCCATCTTCCAAACCTTTGGCTTTTGCCAGATGTAGATaGCACTTGCATTATCTGCTTCTGTCTCTGGGCTGCAGAAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLFPSSKPLAFARCR*HLHYLLLSLGCRKA Trigger: TGCCTTTCTGCAGCCCAGAGACAGAAGCAGATAATGCAAGTGTCATCTACATCTGGCAAAAGCCAAAGGTTTGGAAGATGGAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000661666.1 ENST00000664410.1 ENST00000668168.1 |
||
| CDS TCA 90 bp | CATGGTGGAAGTCCAGGATGCAAGAGGAACAGTCTCCTTGAAATGTaGGTTCACAGGCTGCCATTTGAATACTGTAATAGCCTCAGATTT | + |
|
Preference number: 5 (lower is better) Translates to: HGGSPGCKRNSLLEM*VHRLPFEYCNSLRF Trigger: AAATCTGAGGCTATTACAGTATTCAAATGGCAGCCTGTGAACTCACATTTCAAGGAGACTGTTCCTCTTGCATCCTGGACTTCCACCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS GCA 90 bp | CTCACAGTTCCCTCTTGTTTGCCTCCCAGCCCCTTCCTTCATCTGTaGAATCAGCTCCTTACATTAAATTTCCCTTTGTTCAGATACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LTVPSCLPPSPFLHL*NQLLTLNFPLFRYL Trigger: TAAGTATCTGAACAAAGGGAAATTTAATGTAAGGAGCTGATTGCACAGATGAAGGAAGGGGCTGGGAGGCAAACAAGAGGGAACTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS GCA 90 bp | GGTCATTTGTCCCCTAGAATATCCTGTGGTATGGATTTTGCAGATTaGATGCCCATGCCATCATTTCTTCTGTTAGGAGGTGCCATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: GHLSPRISCGMDFAD*MPMPSFLLLGGAIV Trigger: TACAATGGCACCTCCTAACAGAAGAAATGATGGCATGGGCATGCAATCTGCAAAATCCATACCACAGGATATTCTAGGGGACAAATGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CCA 90 bp | ATAACATGTCAAAGACATCCAGCGACGCATTCTACACTTTTGATTTaGTTTCCCCCTTGCATGTCCCATTATGTGAAGAGAAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ITCQRHPATHSTLLI*FPPCMSHYVKRRLW Trigger: CCAGAGCCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 10 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS TCA 90 bp | CCAAAGGAAATTTCCTTCTCAGCATCTCCAAAGGGGGCCTTTGATTaGATGAAGAATCTTTGCTCTCTTCACCCACAACAGATGCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: PKEISFSASPKGAFD*MKNLCSLHPQQMHE Trigger: TTCATGCATCTGTTGTGGGTGAAGAGAGCAAAGATTCTTCATTCAATCAAAGGCCCCCTTTGGAGATGCTGAGAAGGAAATTTCCTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626474.3 ENST00000664517.1 |
||
| CDS GCA 90 bp | ACTTATTTGATACTTTCTATGAGCCAGGCCCCATGCTCAGCACTTTaGATGCATAATCTCACAGAATTCTCACCGGATTTTAGAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TYLILSMSQAPCSAL*MHNLTEFSPDFRTW Trigger: CCAGGTTCTAAAATCCGGTGAGAATTCTGTGAGATTATGCATGCAAAGTGCTGAGCATGGGGCCTGGCTCATAGAAAGTATCAAATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498432.6 |
||
| CDS GCA 90 bp | AACTTGTCTACCACTTATTTGATACTTTCTATGAGCCAGGCCCCATaGTCAGCACTTTGCATGCATAATCTCACAGAATTCTCACCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLSTTYLILSMSQAP*SALCMHNLTEFSPD Trigger: ATCCGGTGAGAATTCTGTGAGATTATGCATGCAAAGTGCTGAGCATGGGGCCTGGCTCATAGAAAGTATCAAATAAGTGGTAGACAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498432.6 |
||
| CDS GCA 90 bp | CCAAACCTTTGGCTTTTGCCAGATGTAGATGACACTTGCATTATCTaGTTCTGTCTCTGGGCTGCAGAAAGGCAAAAGTGGAAATTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PNLWLLPDVDDTCII*FCLWAAERQKWKLS Trigger: TGATAATTTCCACTTTTGCCTTTCTGCAGCCCAGAGACAGAAGCAGATAATGCAAGTGTCATCTACATCTGGCAAAAGCCAAAGGTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000661666.1 ENST00000664410.1 ENST00000668168.1 |
||
| CDS TCA 90 bp | CAGCATCAAGGATTAACAGAGACGATTTCAAGGCCAAATCACATCTaGGGGCTGCCAGGCAGATTTATTATCAAATCCTTAAACTGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QHQGLTETISRPNHI*GLPGRFIIKSLNCK Trigger: TTTGCAGTTTAAGGATTTGATAATAAATCTGCCTGGCAGCCCTCAGATGTGATTTGGCCTTGAAATCGTCTCTGTTAATCCTTGATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS TCA 90 bp | CATTGGACACTCAGAATTTCAGTGATGTCTTCCAGAAATCTTTGCTaGAGCTACAGTCTAACAGATTGTGGTTTACAAGAGATGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HWTLRISVMSSRNLC*SYSLTDCGLQEMPG Trigger: TCCTGGCATCTCTTGTAAACCACAATCTGTTAGACTGTAGCTTCAGCAAAGATTTCTGGAAGACATCACTGAAATTCTGAGTGTCCAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS TCA 90 bp | TTCCTTTTTCCATCTTCCAAACCTTTGGCTTTTGCCAGATGTAGATaGCACTTGCATTATCTGCTTCTGTCTCTGGGTCTTGTTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLFPSSKPLAFARCR*HLHYLLLSLGLVQK Trigger: TTTCTGAACAAGACCCAGAGACAGAAGCAGATAATGCAAGTGTCATCTACATCTGGCAAAAGCCAAAGGTTTGGAAGATGGAAAAAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS GCA 90 bp | TCATCTCTGTCGCTCCTCTGCCTCTTTCTTTGGGACTTAAAACAGTaGCTGCCGTGTAAGGAGATGATAAATACTTACAGAATTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLSLLCLFLWDLKQ*LPCKEMINTYRIEF Trigger: AAATTCAATTCTGTAAGTATTTATCATCTCCTTACACGGCAGGCACTGTTTTAAGTCCCAAAGAAAGAGGCAGAGGAGCGACAGAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000468646.6 ENST00000626474.3 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 90 bp | ACTTGCATTATCTGCTTCTGTCTCTGGGCTGCAGAAAGGCAAAAGTaGAAATTATCAACCACAAGTGAAAATGACAACTTGTCTACCACT | + |
|
Preference number: 5 (lower is better) Translates to: TCIICFCLWAAERQK*KLSTTSENDNLSTT Trigger: AGTGGTAGACAAGTTGTCATTTTCACTTGTGGTTGATAATTTCCACTTTTGCCTTTCTGCAGCCCAGAGACAGAAGCAGATAATGCAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000661666.1 ENST00000664410.1 ENST00000668168.1 |
||
| CDS CCA 90 bp | TTTCAAGGGAGGAAGTCATCTCTGTCGCTCCTCTGCCTCTTTCTTTaGGACTTAAAACAGTGCATGATTCAAAAGTTCAAGGATATAATA | + |
|
Preference number: 5 (lower is better) Translates to: FQGRKSSLSLLCLFL*DLKQCMIQKFKDII Trigger: TATTATATCCTTGAACTTTTGAATCATGCACTGTTTTAAGTCCCAAAGAAAGAGGCAGAGGAGCGACAGAGATGACTTCCTCCCTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000469218.6 ENST00000608654.6 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 |
||
| CDS CCA 72 bp | CGACGGGGCCAGAGAGGTAAGAAAGGTGAGCAGGGCTaGGGGCTGGGACTCTGCGGCCGTCTAACGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGQRGKKGEQG*GLGLCGRLTGS Trigger: GCTGCCCGTTAGACGGCCGCAGAGTCCCAGCCCCCAGCCCTGCTCACCTTTCTTACCTCTCTGGCCCCGTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464271.1 ENST00000468646.6 |
||
| CDS CCA 72 bp | TCGGCCATTGGTCTGCTTGCTGAGCCACGGCGTCTGTaGGGTGGCCCCGTCCTCAGATTGGCAGGGGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SAIGLLAEPRRL*GGPVLRLAGVL Trigger: TAGAACCCCTGCCAATCTGAGGACGGGGCCACCCCACAGACGCCGTGGCTCAGCAAGCAGACCAATGGCCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000464271.1 ENST00000468646.6 ENST00000498432.6 |
||
| CDS TCA 72 bp | GGGATGAATGGCCAGGCTTCTGTGCCCCCATGCAGATaGGGATGTGGGCAGCCTAGGAGGGCGTGTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: GMNGQASVPPCR*GCGQPRRACSM Trigger: CATGGAACACGCCCTCCTAGGCTGCCCACATCCTCATCTGCATGGGGGCACAGAAGCCTGGCCATTCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | ACTCTGATCCCAGGAGGAGCTGGCAGCGCTACTGCCTaGGCCATGGTGCTGAGGCAGGGAGGGAATGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLIPGGAGSATA*AMVLRQGGNGK Trigger: TTTCCCATTCCCTCCCTGCCTCAGCACCATGGCTCAGGCAGTAGCGCTGCCAGCTCCTCCTGGGATCAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 72 bp | CATAACTCTGATCCCAGGAGGAGCTGGCAGCGCTACTaGCTGAGCCATGGTGCTGAGGCAGGGAGGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: HNSDPRRSWQRY*LSHGAEAGREW Trigger: CCATTCCCTCCCTGCCTCAGCACCATGGCTCAGGCAGTAGCGCTGCCAGCTCCTCCTGGGATCAGAGTTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | GAAAGCCCTCACAGGCAGCTCCGGTTCTGTGGGGCCTaGGAGCTGATGGACAGATACTGCCCAGTGAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: ESPHRQLRFCGA*ELMDRYCPVNG Trigger: GCCATTCACTGGGCAGTATCTGTCCATCAGCTCCCAGGCCCCACAGAACCGGAGCTGCCTGTGAGGGCTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | CCTTGGGCAGCCCATCAGGTTGCTGGGAGCATGTCCTaGGTCTCCCATGGGATGAATGGCCAGGCTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PWAAHQVAGSMS*VSHGMNGQASV Trigger: CACAGAAGCCTGGCCATTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCTGATGGGCTGCCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | TCCTGTCCTCTTTCCCTGCTCCCTCGCTCCGAGTCCTaGGACCAGCTCTGCCACAGGTTGGGTTCTCTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SCPLSLLPRSES*DQLCHRLGSLQ Trigger: TTGCAGAGAACCCAACCTGTGGCAGAGCTGGTCTCAGGACTCGGAGCGAGGGAGCAGGGAAAGAGGACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | GCCAGTGCATATGTGAAGCCCAGAAATGCAGGGCAGTaGAAGCCCTCACAGGCAGCTCCGGTTCTGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASAYVKPRNAGQ*KPSQAAPVLWG Trigger: GCCCCACAGAACCGGAGCTGCCTGTGAGGGCTTTCACTGCCCTGCATTTCTGGGCTTCACATATGCACTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | TTCCACATGGCCGGGGAAGAGGCCTCACAGTCATGGTaGAAGGCAAAACGCAGGTCTCACATGGCAGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FHMAGEEASQSW*KAKRRSHMAAG Trigger: GCCTGCTGCCATGTGAGACCTGCGTTTTGCCTTCCACCATGACTGTGAGGCCTCTTCCCCGGCCATGTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 10 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | CCATCAGGTTGCTGGGAGCATGTCCTGAGTCTCCCATaGGATGAATGGCCAGGCTTCTGTGCCCCCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGCWEHVLSLP*DEWPGFCAPMQ Trigger: CTGCATGGGGGCACAGAAGCCTGGCCATTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCTGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | CCCAAGACCAAGGCACCTAATGTATGGCAGGTCCTTTaGGATGCCCCACACCATGCCCCCTGGGTCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PKTKAPNVWQVL*DAPHHAPWVCF Trigger: GAAGCAGACCCAGGGGGCATGGTGTGGGGCATCCCAAAGGACCTGCCATACATTAGGTGCCTTGGTCTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | AGGTTGCTGGGAGCATGTCCTGAGTCTCCCATGGGATaGATGGCCAGGCTTCTGTGCCCCCATGCAGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLGACPESPMG*MARLLCPHADE Trigger: CTCATCTGCATGGGGGCACAGAAGCCTGGCCATTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 72 bp | GAAGCGTATCCTTTCGTCTGGGGTCCCAGGCTCAAATaGCGACGGGGCCAGAGAGGTAAGAAAGGTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EAYPFVWGPRLK*RRGQRGKKGEQ Trigger: CTGCTCACCTTTCTTACCTCTCTGGCCCCGTCGGCATTTGAGCCTGGGACCCCAGACGAAAGGATACGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000464271.1 ENST00000468646.6 |
||
| CDS GCA 72 bp | TGCAGGATCAGCCAAGCCTTGGGCAGCCCATCAGGTTaGTGGGAGCATGTCCTGAGTCTCCCATGGGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: CRISQALGSPSG*WEHVLSLPWDE Trigger: TTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCTGATGGGCTGCCCAAGGCTTGGCTGATCCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 72 bp | CGGTTCTGTGGGGCCTGGGAGCTGATGGACAGATACTaGCCAGTGAATGGCTCCAGGCATCTTGTACCCATC | + |
|
Preference number: 6 (lower is better) Translates to: RFCGAWELMDRY*PVNGSRHLVPI Trigger: GATGGGTACAAGATGCCTGGAGCCATTCACTGGGCAGTATCTGTCCATCAGCTCCCAGGCCCCACAGAACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | GAGTTCCACATGGCCGGGGAAGAGGCCTCACAGTCATaGTGGAAGGCAAAACGCAGGTCTCACATGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EFHMAGEEASQS*WKAKRRSHMAA Trigger: TGCTGCCATGTGAGACCTGCGTTTTGCCTTCCACCATGACTGTGAGGCCTCTTCCCCGGCCATGTGGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | AGGATCAGCCAAGCCTTGGGCAGCCCATCAGGTTGCTaGGAGCATGTCCTGAGTCTCCCATGGGATGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: RISQALGSPSGC*EHVLSLPWDEW Trigger: CCATTCATCCCATGGGAGACTCAGGACATGCTCCCAGCAACCTGATGGGCTGCCCAAGGCTTGGCTGATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CAA 90 bp | CAGCATGCCACCTCAAGTGCACCCACTTTCTGCTCAGGATCGTCCTaGAAGACAGGGAGCCCTCTCAGCCAGTGCATATGTGAAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QHATSSAPTFCSGSS*KTGSPLSQCICEAQ Trigger: CTGGGCTTCACATATGCACTGGCTGAGAGGGCTCCCTGTCTTCAAGGACGATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS TCA 72 bp | GGCAGAAGAGGTGGAGGAGCTGCTGACTCACCTTGTTaGTGTGATGCAGGAGCTGGGCCAGGTGTGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GRRGGGAADSPC*CDAGAGPGVCV Trigger: AACACACACACCTGGCCCAGCTCCTGCATCACATCAACAAGGTGAGTCAGCAGCTCCTCCACCTCTTCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS GCA 72 bp | TCGCAACAGCATGCCACCTCAAGTGCACCCACTTTCTaGTCAGGATCGTCCTTGAAGACAGGGAGCCCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SQQHATSSAPTF*SGSSLKTGSPL Trigger: GAGAGGGCTCCCTGTCTTCAAGGACGATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCTGTTGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CAA 90 bp | ATGCCATTCATCCCAGTGCCACATGGCTGCCCAGTTTGTGCCCAGTaGTCCTCCTCATGGCCATCTGCTAGGGCACACTCATGGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: MPFIPVPHGCPVCAQ*SSSWPSARAHSWSC Trigger: ACATGACCATGAGTGTGCCCTAGCAGATGGCCATGAGGAGGACAACTGGGCACAAACTGGGCAGCCATGTGGCACTGGGATGAATGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CCA 72 bp | GATGCAGGAGCTGGGCCAGGTGTGTGTGTTCAGATCTaGAACAAATGCCCAACCTCTGTAGGATGCCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DAGAGPGVCVQI*NKCPTSVGCPH Trigger: GTGAGGGCATCCTACAGAGGTTGGGCATTTGTTCCAGATCTGAACACACACACCTGGCCCAGCTCCTGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CAA 90 bp | GCTCCTCCTGCTGCAGGCCAAGGACAACAGCACTGGACATTCACCTaGGACCTGGTCATTCACTTCAATCTTGGGCTCCTTTTTGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: APPAAGQGQQHWTFT*DLVIHFNLGLLFAW Trigger: CCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS GCA 72 bp | CTGAGCTTGACATTTGCTCTCCAAGTCTTAGATCCCTaGTCCTCCTGCTGCAGGCCAAGGACAACAGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLTFALQVLDP*SSCCRPRTTAL Trigger: CAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | GGATCGTCCTTGAAGACAGGGAGCCCTCTCAGCCAGTaGATATGTGAAGCCCAGAAATGCAGGGCAGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSSLKTGSPLSQ*ICEAQKCRAVK Trigger: TTTCACTGCCCTGCATTTCTGGGCTTCACATATGCACTGGCTGAGAGGGCTCCCTGTCTTCAAGGACGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | CCTGCTCCTCCTGCTGCAGGCCAAGGACAACAGCACTaGACATTCACCTTGGACCTTGGTCAAAATGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PAPPAAGQGQQH*TFTLDLGQNAE Trigger: TTCTGCATTTTGACCAAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | CCTGCTCCTCCTGCTGCAGGCCAAGGACAACAGCACTaGACATTCACCTTGGACCTGGTCATTCACTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPPAAGQGQQH*TFTLDLVIHFN Trigger: ATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CCA 72 bp | ATCTCCCTTCTACCCAGCCAGAGGGATCCATCACACTaGAGAGGATTAGGACTGTGTGGCAGGAATGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISLLPSQRDPSH*RGLGLCGRNAE Trigger: CTCTGCATTCCTGCCACACAGTCCTAATCCTCTCCAGTGTGATGGATCCCTCTGGCTGGGTAGAAGGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668763.1 |
||
| CDS CAA 90 bp | GTCTTCCTACTGTGGCAAATCCCTGGGTTACCTCACAGTTCCCTCTaGTTTGCCTCCCAGCCCCTTCCTTCATCTGTGCAATCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLLWQIPGLPHSSL*FASQPLPSSVQSAP Trigger: AGGAGCTGATTGCACAGATGAAGGAAGGGGCTGGGAGGCAAACAAGAGGGAACTGTGAGGTAACCCAGGGATTTGCCACAGTAGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS GCA 72 bp | TTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTGCTaGAGGCCAAGGACAACAGCACTGGACATTCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: FALQVLDPCSSC*RPRTTALDIHL Trigger: AAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | ACATTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTaGTGCAGGCCAAGGACAACAGCACTGGACATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TFALQVLDPCSS*CRPRTTALDIH Trigger: GTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | GCTGGGCCAGGTGTGTGTGTTCAGATCTGGAACAAATaGCCAACCTCTGTAGGATGCCCTCACCACAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AGPGVCVQIWNK*PTSVGCPHHKE Trigger: TTCTTTGTGGTGAGGGCATCCTACAGAGGTTGGGCATTTGTTCCAGATCTGAACACACACACCTGGCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CAA 72 bp | CTAGCCCATAGCCACACAGGGCCAGTGACTACCATGTaGGCCAGCACAGCTTCAGATGCGATGGAAAATACA | + |
|
Preference number: 6 (lower is better) Translates to: LAHSHTGPVTTM*ASTASDAMENT Trigger: TGTATTTTCCATCGCATCTGAAGCTGTGCTGGCCAACATGGTAGTCACTGGCCCTGTGTGGCTATGGGCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470712.2 |
||
| CDS CAA 72 bp | TACCTCCCACCAGATCCCTCCCACACCACGTGGGAATaGTGGGAGCTACAATTCAAGATGAGATTTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: YLPPDPSHTTWE*WELQFKMRFGW Trigger: CCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCCACGTGGTGTGGGAGGGATCTGGTGGGAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CAA 72 bp | GCTGCAGGCCAAGGACAACAGCACTGGACATTCACCTaGGACCTGGTCATTCACTTCAATCTTGGGCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AAGQGQQHWTFT*DLVIHFNLGLL Trigger: AAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CAA 90 bp | TCCTACTGTGGCAAATCCCTGGGTTACCTCACAGTTCCCTCTTGTTaGCCTCCCAGCCCCTTCCTTCATCTGTGCAATCAGCTCCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: SYCGKSLGYLTVPSC*PPSPFLHLCNQLLT Trigger: TGTAAGGAGCTGATTGCACAGATGAAGGAAGGGGCTGGGAGGCAAACAAGAGGGAACTGTGAGGTAACCCAGGGATTTGCCACAGTAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS CAA 90 bp | CCATTAGGACTAGCCCATAGCCACACAGGGCCAGTGACTACCATGTaGGCCAGCACAGCTTCAGATGCGATGGAAAATACAACTCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLGLAHSHTGPVTTM*ASTASDAMENTTQS Trigger: GCTTTGAGTTGTATTTTCCATCGCATCTGAAGCTGTGCTGGCCAACATGGTAGTCACTGGCCCTGTGTGGCTATGGGCTAGTCCTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470712.2 |
||
| CDS TCA 72 bp | GGAGGCACTTCTTGCAGTCTACCCTGCAGTCTCAGCTaGTACAATAGAAGTCAGCTCCTGTGTTCTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGTSCSLPCSLS*YNRSQLLCSQP Trigger: AGGCTGAGAACACAGGAGCTGACTTCTATTGTATCAGCTGAGACTGCAGGGTAGACTGCAAGAAGTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000481148.5 ENST00000656335.1 |
||
| CDS TCA 72 bp | AGCCTAGGAGGGCGTGTTCCATGCTGTCTCTGTAGTTaGGGCAAATCCTTGTTCATCACCGGCTTTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGGRVPCCLCS*GKSLFITGFPS Trigger: AGAAGGAAAGCCGGTGATGAACAAGGATTTGCCTCAACTACAGAGACAGCATGGAACACGCCCTCCTAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS GCA 72 bp | TCTGCTTCTCATAAAGCTCAGACTCTCGCAACAGCATaGCACCTCAAGTGCACCCACTTTCTGCTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SASHKAQTLATA*HLKCTHFLLRI Trigger: GATCCTGAGCAGAAAGTGGGTGCACTTGAGGTGGCATGCTGTTGCGAGAGTCTGAGCTTTATGAGAAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000488545.2 ENST00000668763.1 |
||
| CDS CCA 72 bp | CTGCAGGCCAAGGACAACAGCACTGGACATTCACCTTaGACCTGGTCATTCACTTCAATCTTGGGCTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LQAKDNSTGHSP*TWSFTSILGSF Trigger: AAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS TCA 72 bp | AGAGGAGAGCAGAAGCCAATGCAACTCCTTAGCTGGTaGAATGCAACCAGAGAAAGAGAGAGAGACAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGEQKPMQLLSW*NATRERERDSP Trigger: TGGGCTGTCTCTCTCTCTTTCTCTGGTTGCATTTCACCAGCTAAGGAGTTGCATTGGCTTCTGCTCTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000469218.6 ENST00000626474.3 ENST00000656335.1 ENST00000658297.1 ENST00000664517.1 |
||
| CDS TCA 72 bp | TCATGGTCATGTTGCCAGCCAATCAGACAGAAGGACTaGGGCTCTTCTGCAGCCAGAGAATTTGCTTTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWSCCQPIRQKD*GSSAAREFALA Trigger: GGCTAAAGCAAATTCTCTGGCTGCAGAAGAGCCTCAGTCCTTCTGTCTGATTGGCTGGCAACATGACCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS GCA 72 bp | ACAGCACTGGACATTCACCTTGGACCTTGGTCAAAATaGAGAATTTCAAGTTCCCGCCAGGACCTACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TALDIHLGPWSK*RISSSRQDLLH Trigger: GTGCAGTAGGTCCTGGCGGGAACTTGAAATTCTGCATTTTGACCAAGGTCCAAGGTGAATGTCCAGTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | ATTTCTCAGCTCTGCTTTCCACTGTGTTGGCTCCATTaGAGACAAACTCTTCCAAGGGAGGGTAGTGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISQLCFPLCWLH*RQTLPREGSEE Trigger: CTCCTCACTACCCTCCCTTGGAAGAGTTTGTCTGCAATGGAGCCAACACAGTGGAAAGCAGAGCTGAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | CTGCAGGCCAAGGACAACAGCACTGGACATTCACCTTaGACCTTGGTCAAAATGCAGAATTTCAAGTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LQAKDNSTGHSP*TLVKMQNFKFP Trigger: CGGGAACTTGAAATTCTGCATTTTGACCAAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGCCTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | GTGGGAATTGTGGGAGCTACAATTCAAGATGAGATTTaGGTGGTGATACCACCAAGCCACATCAGTGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGIVGATIQDEI*VVIPPSHISGG Trigger: ACCCCCACTGATGTGGCTTGGTGGTATCACCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CCA 72 bp | GCCAAGGACAACAGCACTGGACATTCACCTTGGACCTaGTCATTCACTTCAATCTTGGGCTCCTTTTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AKDNSTGHSPWT*SFTSILGSFLP Trigger: AGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTTGTCCTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CCA 72 bp | GACCAAGTCATTAGACTCAAGGACGTGAACCTTCCATaGTGGAAGTCCAGGATGCAAGAGGAACAGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DQVIRLKDVNLP*WKSRMQEEQSP Trigger: AGGAGACTGTTCCTCTTGCATCCTGGACTTCCACCATGGAAGGTTCACGTCCTTGAGTCTAATGACTTGGTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CCA 72 bp | AGTTTCAGTCTATCCTTGTGGAGCTCTAGCTTGTGCTaGTGGGGTTTCCATTTGCTTGTGGCCTTTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSLSLWSSSLC*WGFHLLVAFPS Trigger: GGAAGGAAAGGCCACAAGCAAATGGAAACCCCACCAGCACAAGCTAGAGCTCCACAAGGATAGACTGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CAA 72 bp | GCTTTGTTTCATGGCTTCCCAGGCAACCTTCTGACTTaGGGATTGCAAGCTAGCTTCAACCAGGCACTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALFHGFPGNLLT*GLQASFNQALS Trigger: GGAAAGTGCCTGGTTGAAGCTAGCTTGCAATCCCAAAGTCAGAAGGTTGCCTGGGAAGCCATGAAACAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000464271.1 ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000481148.5 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000666244.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | ACCTACTGCACCAGAGTCTGCATTTCACCAAGATCTCCAGGTGACTaGAATAGTCAGTTTGAGAAGCGCTGCTCTAGGCTTCTCCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: TYCTRVCISPRSPGD*NSQFEKRCSRLLPL Trigger: TAGAGGGAGAAGCCTAGAGCAGCGCTTCTCAAACTGACTATTCAAGTCACCTGGAGATCTTGGTGAAATGCAGACTCTGGTGCAGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCGGAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLICRRD Trigger: GTCCCTCCGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000462492.5 ENST00000470712.2 ENST00000608654.6 ENST00000662591.1 ENST00000665453.1 ENST00000668763.1 ENST00000671527.1 |
||
| CDS TCA 72 bp | ATTTGGCTTTGTTTCATGGCTTCCCAGGCAACCTTCTaGCTTTGGGATTGCAAGCTAGCTTCAACCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: IWLCFMASQATF*LWDCKLASTRH Trigger: GTGCCTGGTTGAAGCTAGCTTGCAATCCCAAAGTCAGAAGGTTGCCTGGGAAGCCATGAAACAAAGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000464271.1 ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000481148.5 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000666244.1 ENST00000671527.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCAAGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLICQAP Trigger: GGGCGCTTGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000468646.6 ENST00000498432.6 |
||
| CDS TCA 72 bp | ACACCACGTGGGAATTGTGGGAGCTACAATTCAAGATaGGATTTGGGTGGTGATACCACCAAGCCACATCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPRGNCGSYNSR*DLGGDTTKPHQ Trigger: CTGATGTGGCTTGGTGGTATCACCACCCAAATCTCATCTTGAATTGTAGCTCCCACAATTCCCACGTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS TCA 72 bp | CCCCTGAAGCACACCATCAAACATCATAGAATCCTCTaGCCTTCTGCTGAAGTCGGTCATAAGAGCCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PLKHTIKHHRIL*PSAEVGHKSLM Trigger: CATGAGGCTCTTATGACCGACTTCAGCAGAAGGTCAGAGGATTCTATGATGTTTGATGGTGTGCTTCAGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS GCA 72 bp | CAAAATGCAGAATTTCAAGTTCCCGCCAGGACCTACTaGACCAGAGTCTGCATTTCACCAAGATCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QNAEFQVPARTY*TRVCISPRSPG Trigger: ACCTGGAGATCTTGGTGAAATGCAGACTCTGGTGCAGTAGGTCCTGGCGGGAACTTGAAATTCTGCATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | ATGAGTTTCAGTCTATCCTTGTGGAGCTCTAGCTTGTaGTGGTGGGGTTTCCATTTGCTTGTGGCCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MSFSLSLWSSSL*WWGFHLLVAFP Trigger: AGGAAAGGCCACAAGCAAATGGAAACCCCACCAGCACAAGCTAGAGCTCCACAAGGATAGACTGAAACTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CCA 72 bp | TGTTTGTCCATTTCTCAGCTCTGCTTTCCACTGTGTTaGCTCCATTGCAGACAAACTCTTCCAAGGGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CLSISQLCFPLC*LHCRQTLPREG Trigger: ACCCTCCCTTGGAAGAGTTTGTCTGCAATGGAGCCAACACAGTGGAAAGCAGAGCTGAGAAATGGACAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | CTTCTGACTTTGGGATTGCAAGCTAGCTTCAACCAGGCACTTTCCTaGTTCATCACCGGCTTTCCTTCTCGTGCCTCCTCTAATTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLTLGLQASFNQALS*FITGFPSRASSNFA Trigger: AGCAAAATTAGAGGAGGCACGAGAAGGAAAGCCGGTGATGAACAAGGAAAGTGCCTGGTTGAAGCTAGCTTGCAATCCCAAAGTCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000464271.1 ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000481148.5 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000666244.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | CCATATTTGGGTTTTGTCCCCAAACTTCCAGTCTTTCTTCTGAGCTaGACATTTGCTCTCCAAGTCTTAGATCCCTGCTCCTCCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PYLGFVPKLPVFLLS*TFALQVLDPCSSCC Trigger: GCAGCAGGAGGAGCAGGGATCTAAGACTTGGAGAGCAAATGTCAAGCTCAGAAGAAAGACTGGAAGTTTGGGGACAAAACCCAAATATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | CTTCAGACATGGCTAAATCCAGGTGCTCAAATGAGGCATCAGGAGTaGTTTGTCCATTTCTCAGCTCTGCTTTCCACTGTGTTGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQTWLNPGAQMRHQE*FVHFSALLSTVLAP Trigger: TGGAGCCAACACAGTGGAAAGCAGAGCTGAGAAATGGACAAACAACTCCTGATGCCTCATTTGAGCACCTGGATTTAGCCATGTCTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000660632.1 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | TTGGGTGGTGATACCACCAAGCCACATCAGTGGGGGTACTTACTCTaGTTCAGAAAGCCTTTCATTCTGATTCGTCCATTTTCCATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGDTTKPHQWGYLL*FRKPFILIRPFSMV Trigger: GACCATGGAAAATGGACGAATCAGAATGAAAGGCTTTCTGAACAAGAGTAAGTACCCCCACTGATGTGGCTTGGTGGTATCACCACCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS TCA 72 bp | AAAGAGAGAGAGACAGCCCAATTCAGTTCTAGAAGCTaGGATGTCCAACATCAAGGCACCAGCGATTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KERETAQFSSRS*DVQHQGTSDSV Trigger: CACTGAATCGCTGGTGCCTTGATGTTGGACATCTCAGCTTCTAGAACTGAATTGGGCTGTCTCTCTCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000469218.6 ENST00000658297.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCAAGCGCCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLIKRPL Trigger: CAAGGGGCGCTTGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464271.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCGGAGGGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLIGGTL Trigger: CAGAGTCCCTCCGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000488545.2 |
||
| CDS TCA 72 bp | TTGTGGGAGCTACAATTCAAGATGAGATTTGGGTGGTaGTACCACCAAGCCACATCAGTGGGGGTACTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LWELQFKMRFGW*YHQATSVGVLT Trigger: AGTAAGTACCCCCACTGATGTGGCTTGGTGGTATCACCACCCAAATCTCATCTTGAATTGTAGCTCCCACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS GCA 72 bp | CCCTCTTGTTTGCCTCCCAGCCCCTTCCTTCATCTGTaGAATCAGCTCCTTACATTAAATTTCCCTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSCLPPSPFLHL*NQLLTLNFPLF Trigger: GAACAAAGGGAAATTTAATGTAAGGAGCTGATTGCACAGATGAAGGAAGGGGCTGGGAGGCAAACAAGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS CCA 72 bp | TTCAATTACCTCCCACCAGATCCCTCCCACACCACGTaGGAATTGTGGGAGCTACAATTCAAGATGAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: FNYLPPDPSHTT*ELWELQFKMRF Trigger: AAATCTCATCTTGAATTGTAGCTCCCACAATTCCCACGTGGTGTGGGAGGGATCTGGTGGGAGGTAATTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CCA 72 bp | CTCACCACAAAGAACATGAGTTTCAGTCTATCCTTGTaGAGCTCTAGCTTGTGCTGGTGGGGTTTCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LTTKNMSFSLSL*SSSLCWWGFHL Trigger: CAAATGGAAACCCCACCAGCACAAGCTAGAGCTCCACAAGGATAGACTGAAACTCATGTTCTTTGTGGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CCA 72 bp | GGCCAGGTCATTTGTCCCCTAGAATATCCTGTGGTATaGATTTTGCAGATTGCATGCCCATGCCATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: GQVICPLEYPVV*ILQIACPCHHF Trigger: GAAATGATGGCATGGGCATGCAATCTGCAAAATCCATACCACAGGATATTCTAGGGGACAAATGACCTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CAA 72 bp | ACCAGAGTCTGCATTTCACCAAGATCTCCAGGTGACTaGAATAGTCAGTTTGAGAAGCGCTGCTCTAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TRVCISPRSPGD*NSQFEKRCSRL Trigger: AAGCCTAGAGCAGCGCTTCTCAAACTGACTATTCAAGTCACCTGGAGATCTTGGTGAAATGCAGACTCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 72 bp | AACATGAGTTTCAGTCTATCCTTGTGGAGCTCTAGCTaGTGCTGGTGGGGTTTCCATTTGCTTGTGGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NMSFSLSLWSSS*CWWGFHLLVAF Trigger: AAAGGCCACAAGCAAATGGAAACCCCACCAGCACAAGCTAGAGCTCCACAAGGATAGACTGAAACTCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS CAA 90 bp | AAGACATCCAGCGACGCATTCTACACTTTTGATTTGGTTTCCCCCTaGCATGTCCCATTATGTGAAGAGAAGGCTCTGGAACTTCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: KTSSDAFYTFDLVSP*HVPLCEEKALELPT Trigger: AGTTGGAAGTTCCAGAGCCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 90 bp | AAGACCTCACCATGTCAAAGACATCCAGCGACGCATTCTACACTTTaGATTTGGTTTCCCCCTTGCATGTCCCATTATGTGAAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KTSPCQRHPATHSTL*IWFPPCMSHYVKRR Trigger: CCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGGTGAGGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CAA 90 bp | AACAGCACTGGACATTCACCTTGGACCTGGTCATTCACTTCAATCTaGGGCTCCTTTTTGCCTGGATTCCTTTTTCCATCTTCCAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: NSTGHSPWTWSFTSI*GSFLPGFLFPSSKP Trigger: AGGTTTGGAAGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCCAGTGCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CAA 90 bp | AGTGATGTCTTCCAGAAATCTTTGCTGAAGCTACAGTCTAACAGATaGTGGTTTACAAGAGATGCCAGGAGCCTCTGGGAGAATGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: SDVFQKSLLKLQSNR*WFTRDARSLWENGL Trigger: CAGTCCATTCTCCCAGAGGCTCCTGGCATCTCTTGTAAACCACAATCTGTTAGACTGTAGCTTCAGCAAAGATTTCTGGAAGACATCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CAA 90 bp | GCAAGAGGAACAGTCTCCTTGAAATGTGAGTTCACAGGCTGCCATTaGAATACTGTAATAGCCTCAGATTTGGACAGGCTGGAAGCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: ARGTVSLKCEFTGCH*NTVIASDLDRLEAR Trigger: TCTAGCTTCCAGCCTGTCCAAATCTGAGGCTATTACAGTATTCAAATGGCAGCCTGTGAACTCACATTTCAAGGAGACTGTTCCTCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCAGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLICQSI Trigger: GATGGACTGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481148.5 |
||
| CDS GCA 72 bp | GCACCTGGTCATTCACTTCAATCTTGGGCTCCTTTTTaGCTGGATTCCTTTTTCCATCTTCCAAACCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: APGHSLQSWAPF*LDSFFHLPNLW Trigger: CCAAAGGTTTGGAAGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | GGACCTGGTCATTCACTTCAATCTTGGGCTCCTTTTTaGCTGGATTCCTTTTTCCATCTTCCAAACCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPGHSLQSWAPF*LDSFFHLPNLW Trigger: CCAAAGGTTTGGAAGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS GCA 72 bp | TTGCATGCCCATGCCATCATTTCTTCTGTTAGGAGGTaGCATTGTATGCAGAATGTGACATCTGAACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LHAHAIISSVRR*HCMQNVTSEQR Trigger: CCTCTGTTCAGATGTCACATTCTGCATACAATGGCACCTCCTAACAGAAGAAATGATGGCATGGGCATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CAA 72 bp | AGTCTCAAAATCTCCATGTGTCTGCTTTGCCTTGATTaGGCTTTGTTTCATGGCTTCCCAGGCAACCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKISMCLLCLD*ALFHGFPGNLL Trigger: CAGAAGGTTGCCTGGGAAGCCATGAAACAAAGCCAAATCAAGGCAAAGCAGACACATGGAGATTTTGAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 13 transcripts: ENST00000464271.1 ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000481148.5 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000665453.1 ENST00000666244.1 ENST00000671527.1 |
||
| CDS CAA 72 bp | AGCGACGCATTCTACACTTTTGATTTGGTTTCCCCCTaGCATGTCCCATTATGTGAAGAGAAGGCTCTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SDAFYTFDLVSP*HVPLCEEKALE Trigger: TTCCAGAGCCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 72 bp | CCATGTCAAAGACATCCAGCGACGCATTCTACACTTTaGATTTGGTTTCCCCCTTGCATGTCCCATTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PCQRHPATHSTL*IWFPPCMSHYV Trigger: CACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CAA 72 bp | GGACATTCACCTTGGACCTGGTCATTCACTTCAATCTaGGGCTCCTTTTTGCCTGGATTCCTTTTTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GHSPWTWSFTSI*GSFLPGFLFPS Trigger: AGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTCCAAGGTGAATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000661666.1 |
||
| CDS CAA 72 bp | ACAGGCTGCCATTTGAATACTGTAATAGCCTCAGATTaGGACAGGCTGGAAGCTAGAAAACTGGCTTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: TGCHLNTVIASD*DRLEARKLASC Trigger: GCATGAAGCCAGTTTTCTAGCTTCCAGCCTGTCCAAATCTGAGGCTATTACAGTATTCAAATGGCAGCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCTCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLICLTM Trigger: CATTGTGAGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000469218.6 ENST00000626474.3 ENST00000656335.1 |
||
| CDS TCA 72 bp | GGGGGTACTTACTCTTGTTCAGAAAGCCTTTCATTCTaGTTCGTCCATTTTCCATGGTCTTCCTCACAATGG | + |
|
Preference number: 6 (lower is better) Translates to: GGTYSCSESLSF*FVHFPWSSSQW Trigger: CCATTGTGAGGAAGACCATGGAAAATGGACGAATCAGAATGAAAGGCTTTCTGAACAAGAGTAAGTACCCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS TCA 72 bp | CACACAGCTAATATCTGGTGGAGTAGAATGAAACCGTaGATCTGCCTGATTGGGAAGCCCATATACTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HTANIWWSRMKP*ICLIGKPIYFD Trigger: GTCAAAGTATATGGGCTTCCCAATCAGGCAGATTCACGGTTTCATTCTACTCCACCAGATATTAGCTGTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498432.6 |
||
| CDS TCA 72 bp | ATTTCCTTCTCAGCATCTCCAAAGGGGGCCTTTGATTaGATGAAGAATCTTTGCTCTCTTCACCCACAACAG | + |
|
Preference number: 6 (lower is better) Translates to: ISFSASPKGAFD*MKNLCSLHPQQ Trigger: CTGTTGTGGGTGAAGAGAGCAAAGATTCTTCATTCAATCAAAGGCCCCCTTTGGAGATGCTGAGAAGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626474.3 ENST00000664517.1 |
||
| CDS TCA 72 bp | GGAAATTTCCTTCTCAGCATCTCCAAAGGGGGCCTTTaGTTGAATGAAGAATCTTTGCTCTCTTCACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GNFLLSISKGGL*LNEESLLSSPT Trigger: TGTGGGTGAAGAGAGCAAAGATTCTTCATTCAATCAAAGGCCCCCTTTGGAGATGCTGAGAAGGAAATTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000626474.3 ENST00000664517.1 |
||
| CDS TCA 72 bp | CTCCATATCCTTTATGATGAACCATTGCATGGAGGGTaGTTTACAACCTCCACTCTCATCTGCCTAGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHILYDEPLHGG*FTTSTLICLGF Trigger: AAACCCTAGGCAGATGAGAGTGGAGGTTGTAAATCACCCTCCATGCAATGGTTCATCATAAAGGATATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666244.1 |
||
| CDS GCA 72 bp | TCGCTCCTCTGCCTCTTTCTTTGGGACTTAAAACAGTaGCTGCCGTGTAAGGAGATGATAAATACTTACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLLCLFLWDLKQ*LPCKEMINTYR Trigger: TCTGTAAGTATTTATCATCTCCTTACACGGCAGGCACTGTTTTAAGTCCCAAAGAAAGAGGCAGAGGAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000468646.6 ENST00000626474.3 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CCA 72 bp | GAGCCTCATGTGGAATACAGTGGAATACTACTCATGTaGGCAGTGCCCATTTCCTTTCTTCGTTTTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EPHVEYSGILLM*AVPISFLRFCF Trigger: GAAACAAAAACGAAGAAAGGAAATGGGCACTGCCCACATGAGTAGTATTCCACTGTATTCCACATGAGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CAA 72 bp | CATTTGAACTGGTGCACCTGGTCATTCACTTCAATCTaGGGCTCCTTTTTGCCTGGATTCCTTTTTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HLNWCTWSFTSI*GSFLPGFLFPS Trigger: AGATGGAAAAAGGAATCCAGGCAAAAAGGAGCCCAAGATTGAAGTGAATGACCAGGTGCACCAGTTCAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 13 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 72 bp | ACATGTCAAAGACATCCAGCGACGCATTCTACACTTTaGATTTGGTTTCCCCCTTGCATGTCCCATTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: TCQRHPATHSTL*IWFPPCMSHYV Trigger: CACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS CAA 72 bp | GATACCACCAAGCCACATCAGTGGGGGTACTTACTCTaGTTCAGAAAGCCTTTCATTCTGATTCGTCCATTT | + |
|
Preference number: 6 (lower is better) Translates to: DTTKPHQWGYLL*FRKPFILIRPF Trigger: AAATGGACGAATCAGAATGAAAGGCTTTCTGAACAAGAGTAAGTACCCCCACTGATGTGGCTTGGTGGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000608654.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS CAA 90 bp | CCTTTTTGCCTGGATTCCTTTTTCCATCTTCCAAACCTTTGGCTTTaGCCAGATGTAGATGACACTTGCATTATCTGCTTCTGTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PFCLDSFFHLPNLWL*PDVDDTCIICFCLW Trigger: CCAGAGACAGAAGCAGATAATGCAAGTGTCATCTACATCTGGCAAAAGCCAAAGGTTTGGAAGATGGAAAAAGGAATCCAGGCAAAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 14 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000470712.2 ENST00000498432.6 ENST00000608654.6 ENST00000626474.3 ENST00000656335.1 ENST00000661666.1 ENST00000662591.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS GCA 72 bp | ACCACTTATTTGATACTTTCTATGAGCCAGGCCCCATaGTCAGCACTTTGCATGCATAATCTCACAGAATTC | + |
|
Preference number: 6 (lower is better) Translates to: TTYLILSMSQAP*SALCMHNLTEF Trigger: GAATTCTGTGAGATTATGCATGCAAAGTGCTGAGCATGGGGCCTGGCTCATAGAAAGTATCAAATAAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000664410.1 ENST00000668168.1 |
||
| CDS GCA 72 bp | AGAGGAACAGTCTCCTTGAAATGTGAGTTCACAGGCTaGCATTTGAATACTGTAATAGCCTCAGATTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGTVSLKCEFTG*HLNTVIASDLD Trigger: GTCCAAATCTGAGGCTATTACAGTATTCAAATGGCAGCCTGTGAACTCACATTTCAAGGAGACTGTTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CAA 72 bp | GTCATTTGTCCCCTAGAATATCCTGTGGTATGGATTTaGCAGATTGCATGCCCATGCCATCATTTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VICPLEYPVVWI*QIACPCHHFFC Trigger: ACAGAAGAAATGATGGCATGGGCATGCAATCTGCAAAATCCATACCACAGGATATTCTAGGGGACAAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658297.1 ENST00000664517.1 |
||
| CDS CAA 90 bp | AGAACAATAACATGTCAAAGACATCCAGCGACGCATTCTACACTTTaGATTTGGTTTCCCCCTTGCATGTCCCATTATGTGAAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RTITCQRHPATHSTL*IWFPPCMSHYVKRR Trigger: CCTTCTCTTCACATAATGGGACATGCAAGGGGGAAACCAAATCAAAAGTGTAGAATGCGTCGCTGGATGTCTTTGACATGTTATTGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 10 transcripts: ENST00000468646.6 ENST00000469218.6 ENST00000608654.6 ENST00000626474.3 ENST00000661666.1 ENST00000664410.1 ENST00000665453.1 ENST00000666244.1 ENST00000668168.1 ENST00000671527.1 |
||
| CDS TCA 72 bp | GGATTAACAGAGACGATTTCAAGGCCAAATCACATCTaGGGGCTGCCAGGCAGATTTATTATCAAATCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GLTETISRPNHI*GLPGRFIIKSL Trigger: TAAGGATTTGATAATAAATCTGCCTGGCAGCCCTCAGATGTGATTTGGCCTTGAAATCGTCTCTGTTAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468646.6 |
||
| CDS TCA 72 bp | GCCATGTTTAATTGTATTATCCCTAGGGGATTGATGTaGGCATTAAAATTTGAGAAGCGATCCCTAGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AMFNCIIPRGLM*ALKFEKRSLGW Trigger: CCAGCCTAGGGATCGCTTCTCAAATTTTAATGCTCACATCAATCCCCTAGGGATAATACAATTAAACATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000498432.6 ENST00000656335.1 ENST00000662591.1 |
||
| CDS TCA 72 bp | CTCAGAATTTCAGTGATGTCTTCCAGAAATCTTTGCTaGAGCTACAGTCTAACAGATTGTGGTTTACAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LRISVMSSRNLC*SYSLTDCGLQE Trigger: CTCTTGTAAACCACAATCTGTTAGACTGTAGCTTCAGCAAAGATTTCTGGAAGACATCACTGAAATTCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660632.1 |
||
| CDS CAA 72 bp | AAGTGGAAATTATCAACCACAAGTGAAAATGACAACTaGTCTACCACTTATTTGATACTTTCTATGAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: KWKLSTTSENDN*STTYLILSMSQ Trigger: CTGGCTCATAGAAAGTATCAAATAAGTGGTAGACAAGTTGTCATTTTCACTTGTGGTTGATAATTTCCACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000498432.6 ENST00000661666.1 ENST00000664410.1 ENST00000668168.1 |
||