RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC00840 (Homo sapiens)

Ensembl gene IDs: ENSG00000226808

Ensembl transcript IDs: ENST00000374432.4, ENST00000431737.1, ENST00000649239.1, ENST00000649942.1, ENST00000652937.1, ENST00000653073.1, ENST00000654492.1, ENST00000657037.1, ENST00000657471.1, ENST00000658791.1, ENST00000659064.1, ENST00000659335.1, ENST00000660203.1, ENST00000661424.1, ENST00000664505.1, ENST00000665279.1, ENST00000666323.1, ENST00000666387.1, ENST00000667243.1, ENST00000669972.1

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp AGTGGGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: SGSWALEERSGGGML*PEEQAGSTLVCWGR
Trigger: CCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS CCA 90 bp GGTGGCACCAGGAGGTCCCCTGAGCCCAGTTCCTGGACATGGCCCTaGGACTTCTGTCCCTGCAGCCTCTGGCCACCATGTCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: GGTRRSPEPSSWTWP*DFCPCSLWPPCPVL
Trigger: GAGGACCGGACATGGTGGCCAGAGGCTGCAGGGACAGAAGTCCCAGGGCCATGTCCAGGAACTGGGCTCAGGGGACCTCCTGGTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
ENST00000664505.1
ENST00000667243.1
CDS CCA 90 bp CGCCCCATCCCTCCGCTGACAACCGGAAATTCTTCACTTCCTGCCTaGTGCTTCCCAGCGCGCCCTGCTGCCAGGAGAACGGCGGCAGGC +
Preference number: 5 (lower is better)
Translates to: RPIPPLTTGNSSLPA*CFPARPAARRTAAG
Trigger: GCCTGCCGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATGGGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 90 bp GTGACGCCCCATCCCTCCGCTGACAACCGGAAATTCTTCACTTCCTaGCTGGTGCTTCCCAGCGCGCCCTGCTGCCAGGAGAACGGCGGC +
Preference number: 5 (lower is better)
Translates to: VTPHPSADNRKFFTS*LVLPSAPCCQENGG
Trigger: GCCGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATGGGGCGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 90 bp CCTTCAGTGGGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PSVGAGLWRRGPGVE*FGQRSRLAPRLSAG
Trigger: CCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACTGAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS CCA 90 bp CTGGACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LDRKYLEERSGGGML*PEEQAGSTLVCWGR
Trigger: CCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS GCA 90 bp CCCGTCTGGACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PVWTGSTWRRGPGVE*FGQRSRLAPRLSAG
Trigger: CCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGACGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 90 bp CCACATCTCTTCTTCCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PHLFFLEERSGGGML*PEEQAGSTLVCWGR
Trigger: CCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAAGAGATGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CCA 90 bp GTTTCCCAGGCTCTGGGGCCACTGCCCGTCTGGACAGGAAGTACCTaGAGGAGAGGTCCGGGGGTGGAATGCTTTGGCCAGAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: VSQALGPLPVWTGST*RRGPGVECFGQRSR
Trigger: CCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGACGGGCAGTGGCCCCAGAGCCTGGGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 90 bp AGACACACCCCTTGCCCTCACCTGTGGGGCAGGTTTCCCAGGCTCTaGGGCCACTGCCCGTCTGGACAGGAAGTACCTGGAGGAGAGGTC +
Preference number: 5 (lower is better)
Translates to: RHTPCPHLWGRFPRL*GHCPSGQEVPGGEV
Trigger: GACCTCTCCTCCAGGTACTTCCTGTCCAGACGGGCAGTGGCCCCAGAGCCTGGGAAACCTGCCCCACAGGTGAGGGCAAGGGGTGTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 90 bp CACTGCCCGTCTGGACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTaGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: HCPSGQEVPGGEVRG*NALARGAGWLHACL
Trigger: CAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGACGGGCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS TCA 90 bp GAGGTCTGCTCCAAGGGCCTTGACCTGGCGGCCCGCTTCATGGAGTaGGCAGGCCACGCGTGCAGTACATGGAGCTTAGGAAGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: EVCSKGLDLAARFME*AGHACSTWSLGSAW
Trigger: CCAAGCACTTCCTAAGCTCCATGTACTGCACGCGTGGCCTGCTCACTCCATGAAGCGGGCCGCCAGGTCAAGGCCCTTGGAGCAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 90 bp CGGAAATTCTTCACTTCCTGCCTGGTGCTTCCCAGCGCGCCCTGCTaGCAGGAGAACGGCGGCAGGCAGGCGTCTTTTCAGGATGCCCTT +
Preference number: 5 (lower is better)
Translates to: RKFFTSCLVLPSAPC*QENGGRQASFQDAL
Trigger: AAGGGCATCCTGAAAAGACGCCTGCCTGCCGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 90 bp AACCGGAAATTCTTCACTTCCTGCCTGGTGCTTCCCAGCGCGCCCTaGTGCCAGGAGAACGGCGGCAGGCAGGCGTCTTTTCAGGATGCC +
Preference number: 5 (lower is better)
Translates to: NRKFFTSCLVLPSAP*CQENGGRQASFQDA
Trigger: GGCATCCTGAAAAGACGCCTGCCTGCCGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS TCA 90 bp GCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCGGGATaGTTCCTTTGGACTCATGGCATCTGGCCTCTCTGGCAGCAGATT +
Preference number: 5 (lower is better)
Translates to: ARGAGWLHACLLGAG*FLWTHGIWPLWQQI
Trigger: AATCTGCTGCCAGAGAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS GCA 90 bp GGTGGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTaGTGGGGGCGGGATGATTCCTTTGGACTCATGGCATCTGGCCTC +
Preference number: 5 (lower is better)
Translates to: GGMLWPEEQAGSTLV*WGRDDSFGLMASGL
Trigger: GAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS TCA 90 bp TTAGGCCGTCCTTCGTGGTTCAGGACAGACGGAAGATGGAAGAGGTaGTGCTGGCCGCCAGTCCTGCTCCATTTTGGTCCTCACCCCCGG +
Preference number: 5 (lower is better)
Translates to: LGRPSWFRTDGRWKR*CWPPVLLHFGPHPR
Trigger: CCGGGGGTGAGGACCAAAATGGAGCAGGACTGGCGGCCAGCATCACCTCTTCCATCTTCCGTCTGTCCTGAACCACGAAGGACGGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS GCA 90 bp TTCTTCCACATCTCTTCTTCCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: FFHISSSWRRGPGVE*FGQRSRLAPRLSAG
Trigger: CCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAAGAGATGTGGAAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CCA 90 bp GGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTaGGGGCGGGATGATTCCTTTGGACTCATGGCATCTGGCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GMLWPEEQAGSTLVC*GRDDSFGLMASGLS
Trigger: AGAGAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS CCA 90 bp AGGCCGGTGCATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTG +
Preference number: 5 (lower is better)
Translates to: RPVHLVLRIWVICLQ*ELGSGGEVRGWNAL
Trigger: CAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCACCGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS TCA 90 bp CTATGCAGACGCCTAGAGCAGGGGTTCATGGTGAGCTCAGCCTCATaGGAGGTTGCAGCCAGACTGGGGAGGGCTGTGGACCAGGTAAAG +
Preference number: 5 (lower is better)
Translates to: LCRRLEQGFMVSSAS*EVAARLGRAVDQVK
Trigger: CTTTACCTGGTCCACAGCCCTCCCCAGTCTGGCTGCAACCTCTCATGAGGCTGAGCTCACCATGAACCCCTGCTCTAGGCGTCTGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000657471.1
ENST00000661424.1
ENST00000669972.1
CDS TCA 90 bp TCTTGGTGTGCTTGCCACAGACTTGGTGACGCCCCATCCCTCCGCTaGCAACCGGAAATTCTTCACTTCCTGCCTGGTGCTTCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SWCACHRLGDAPSLR*QPEILHFLPGASQR
Trigger: GCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATGGGGCGTCACCAAGTCTGTGGCAAGCACACCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS TCA 90 bp GGTCCACGGCTTTCAGGTGCATCTGTGGGGAGGTGCCTTCCCTTGTaGATAGGTCCCGTGTCAAGAGTCTCGTGGACACCACTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GPRLSGASVGRCLPL*IGPVSRVSWTPLRP
Trigger: TGGCCTCAGTGGTGTCCACGAGACTCTTGACACGGGACCTATTCACAAGGGAAGGCACCTCCCCACAGATGCACCTGAAAGCCGTGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 90 bp TGCATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTGGGAGCTaGGCTCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTGGCCAGAG +
Preference number: 5 (lower is better)
Translates to: CIWFSGSGSYAFSGS*ALEERSGGGMLWPE
Trigger: CTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS TCA 90 bp CTCCTTATATATTTTCACAGGCCAGGCAGTAATTGCCTCCAGAGATaGGGCCCTGATGGGTTAGGGGAGGAACCCTGCCCACCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: LLIYFHRPGSNCLQR*GPDGLGEEPCPPAR
Trigger: GCGGGCGGGTGGGCAGGGTTCCTCCCCTAACCCATCAGGGCCTCATCTCTGGAGGCAATTACTGCCTGGCCTGTGAAAATATATAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS TCA 90 bp CAACAGGCTCAGCCATTCTGGCGACAGGGGCAGGAGGCTTTGGACTaGGGTCTGGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAGGT +
Preference number: 5 (lower is better)
Translates to: QQAQPFWRQGQEALD*GLEDKRMPTGQRRG
Trigger: ACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCTGCCCCTGTCGCCAGAATGGCTGAGCCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS GCA 90 bp CGAAAGCTCAGGCCGGTGCATCTGGTTCTCAGGATCTGGGTCATATaGCTTCAGTGGGAGCTGGGCTCTGTGGAACTTTGGGGAGCCAAG +
Preference number: 5 (lower is better)
Translates to: RKLRPVHLVLRIWVI*LQWELGSVELWGAK
Trigger: CTTGGCTCCCCAAAGTTCCACAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCACCGGCCTGAGCTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000667243.1
CDS GCA 90 bp ACGCCTAGAGCAGGGGTTCATGGTGAGCTCAGCCTCATGAGAGGTTaGAGCCAGACTGGGGAGGGCTGTGGACCAGGTAAAGATCTAGTC +
Preference number: 5 (lower is better)
Translates to: TPRAGVHGELSLMRG*SQTGEGCGPGKDLV
Trigger: GACTAGATCTTTACCTGGTCCACAGCCCTCCCCAGTCTGGCTGCAACCTCTCATGAGGCTGAGCTCACCATGAACCCCTGCTCTAGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000657471.1
ENST00000661424.1
ENST00000669972.1
CDS CCA 90 bp CAGCATACATTTGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTTaGCCCCCGACCATCTTCAACTATGGTGCAGCCCTTCTCCTCAGA +
Preference number: 5 (lower is better)
Translates to: QHTFAPRKPVHRGAA*PPTIFNYGAALLLR
Trigger: TCTGAGGAGAAGGGCTGCACCATAGTTGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 90 bp CTCAGCCATTCTGGCGACAGGGGCAGGAGGCTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAGGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: LSHSGDRGRRLWTEV*RISACQQAKEEVDS
Trigger: ACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCTGCCCCTGTCGCCAGAATGGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS TCA 90 bp CTTCACCCGTGTGGGAAGGATTGCTCCATCAGTCAGCCGAATTCCTaGGAATCACAGGGTCCACGGCTTTCAGGTGCATCTGTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: LHPCGKDCSISQPNS*ESQGPRLSGASVGR
Trigger: CCTCCCCACAGATGCACCTGAAAGCCGTGGACCCTGTGATTCTCAGGAATTCGGCTGACTGATGGAGCAATCCTTCCCACACGGGTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS GCA 90 bp TGCATAGGGCAAGGCATGTGGGAAGGGATGAGATGCTTCCATGACTaGCCCAGGCACCACCCTCCAGGAACCTCCATGTGCTCAGATATC +
Preference number: 5 (lower is better)
Translates to: CIGQGMWEGMRCFHD*PRHHPPGTSMCSDI
Trigger: GATATCTGAGCACATGGAGGTTCCTGGAGGGTGGTGCCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTGCCCTATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS GCA 90 bp CAGATGAAGAGATGCATAGGGCAAGGCATGTGGGAAGGGATGAGATaGTTCCATGACTGCCCCAGGCACCACCCTCCAGGAACCTCCATG +
Preference number: 5 (lower is better)
Translates to: QMKRCIGQGMWEGMR*FHDCPRHHPPGTSM
Trigger: CATGGAGGTTCCTGGAGGGTGGTGCCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTGCCCTATGCATCTCTTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS GCA 90 bp CAGTCAGCCGAATTCCTGAGAATCACAGGGTCCACGGCTTTCAGGTaGATCTGTGGGGAGGTGCCTTCCCTTGTGAATAGGTCCCGTGTC +
Preference number: 5 (lower is better)
Translates to: QSAEFLRITGSTAFR*ICGEVPSLVNRSRV
Trigger: GACACGGGACCTATTCACAAGGGAAGGCACCTCCCCACAGATGCACCTGAAAGCCGTGGACCCTGTGATTCTCAGGAATTCGGCTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 90 bp GCTCCACGCTTGTCTGCTGGGGGCGGGATGATTCCTTTGGACTCATaGCATCTGGCCTCTCTGGCAGCAGATTCTCCCTTTTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: APRLSAGGGMIPLDS*HLASLAADSPFSKP
Trigger: AGGCTTAGAAAAGGGAGAATCTGCTGCCAGAGAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS CCA 90 bp AGCTCCATGCCTCCATGGAAACCCAGCCTGAAGATCTCAAGATCCTaGTCCCTGGAGAAGCAGATCCATGGCACCGAACCCCACACCGTA +
Preference number: 5 (lower is better)
Translates to: SSMPPWKPSLKISRS*SLEKQIHGTEPHTV
Trigger: TACGGTGTGGGGTTCGGTGCCATGGATCTGCTTCTCCAGGGACCAGGATCTTGAGATCTTCAGGCTGGGTTTCCATGGAGGCATGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS CCA 90 bp AGGCCGGTGCATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTCTTCACCATTTGCCATGCAGGTGAGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RPVHLVLRIWVICLQ*ELGSSPFAMQVSLG
Trigger: TCCAAGGCTCACCTGCATGGCAAATGGTGAAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCACCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649942.1
ENST00000658791.1
CDS CCA 90 bp AGAGGAACTGGCACCGTCAAGAAACTCACGGAATACCCGTGTGTCTaGGTCAAGGGGAGTCCTCCACCTTCACCCGTGTGGGAAGGATTG +
Preference number: 5 (lower is better)
Translates to: RGTGTVKKLTEYPCV*VKGSPPPSPVWEGL
Trigger: CAATCCTTCCCACACGGGTGAAGGTGGAGGACTCCCCTTGACCCAGACACACGGGTATTCCGTGAGTTTCTTGACGGTGCCAGTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 90 bp GTCATCAACAGGCTCAGCCATTCTGGCGACAGGGGCAGGAGGCTTTaGACTGAGGTCTGGAGGATAAGCGCATGCCAACAGGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: VINRLSHSGDRGRRL*TEVWRISACQQAKE
Trigger: TTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCTGCCCCTGTCGCCAGAATGGCTGAGCCTGTTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS TCA 90 bp TGGTTCTCAGGATCTGGGTCATATGCCTTCAGTGGGAGCTGGGCTTaGGGTGTCTTGTCCTTCTCCCTCGGGATGCTCATCTCCCAGATG +
Preference number: 5 (lower is better)
Translates to: WFSGSGSYAFSGSWA*GVLSFSLGMLISQM
Trigger: CATCTGGGAGATGAGCATCCCGAGGGAGAAGGACAAGACACCTCAAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS GCA 90 bp ATCAGGGACACGTCCACTCCCTCCCAAGCCTCTGCAAATGCTCCCTaGTCTAGGAATGAGGTGGAGCAAACAGCACTTAGCACAAAGGCC +
Preference number: 5 (lower is better)
Translates to: IRDTSTPSQASANAP*SRNEVEQTALSTKA
Trigger: GGCCTTTGTGCTAAGTGCTGTTTGCTCCACCTCATTCCTAGAGCAGGGAGCATTTGCAGAGGCTTGGGAGGGAGTGGACGTGTCCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649942.1
CDS GCA 90 bp CTTCAATCACTGCCAAGAGAAAGGCTTGGATTTCCAGCATACATTTaGTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTTGGCCCCCGAC +
Preference number: 5 (lower is better)
Translates to: LQSLPRERLGFPAYI*SQKAGAQGSSLAPD
Trigger: GTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCAAGCCTTTCTCTTGGCAGTGATTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 90 bp CAGCCTGAAGATCTCAAGATCCTGGTCCCTGGAGAAGCAGATCCATaGCACCGAACCCCACACCGTACAGCCCATCTAAAGGTCAATGGC +
Preference number: 5 (lower is better)
Translates to: QPEDLKILVPGEADP*HRTPHRTAHLKVNG
Trigger: GCCATTGACCTTTAGATGGGCTGTACGGTGTGGGGTTCGGTGCCATGGATCTGCTTCTCCAGGGACCAGGATCTTGAGATCTTCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS CCA 90 bp GGGCCCGGGATGAGTCACTCTCGTTCCAGCCTGGCGTCTTCCCTTTaGGAGCCTTTCTGCAGACAGAAAACTGTAGCCAAATTAGGACAC +
Preference number: 5 (lower is better)
Translates to: GPGMSHSRSSLASSL*EPFCRQKTVAKLGH
Trigger: GTGTCCTAATTTGGCTACAGTTTTCTGTCTGCAGAAAGGCTCCCAAAGGGAAGACGCCAGGCTGGAACGAGAGTGACTCATCCCGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS TCA 90 bp AGCCTTGGACTTAGCTGGTTCTTGGTGTGCTTGCCACAGACTTGGTaGCGCCCCATCCCTCCGCTGACAACCGGAAATTCTTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: SLGLSWFLVCLPQTW*RPIPPLTTGNSSLP
Trigger: AGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATGGGGCGTCACCAAGTCTGTGGCAAGCACACCAAGAACCAGCTAAGTCCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS TCA 90 bp GGTCCCGTGTCAAGAGTCTCGTGGACACCACTGAGGCCATGGAGCTaGGTACTGGGCGGATTAATCAGAGATTCAAGTCCTCAGTCCAGA +
Preference number: 5 (lower is better)
Translates to: GPVSRVSWTPLRPWS*VLGGLIRDSSPQSR
Trigger: TCTGGACTGAGGACTTGAATCTCTGATTAATCCGCCCAGTACTCAGCTCCATGGCCTCAGTGGTGTCCACGAGACTCTTGACACGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS GCA 90 bp AGAAAGGCTTGGATTTCCAGCATACATTTGCTCCCAGAAAGCCGGTaGACAGGGGAGCAGCTTGGCCCCCGACCATCTTCAACTATGGTG +
Preference number: 5 (lower is better)
Translates to: RKAWISSIHLLPESR*TGEQLGPRPSSTMV
Trigger: CACCATAGTTGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCAAGCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 90 bp TGCATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTGGGAGCTaGGCTCTGTGGAACTTTGGGGAGCCAAGGGTCAGAATCCACCAT +
Preference number: 5 (lower is better)
Translates to: CIWFSGSGSYAFSGS*ALWNFGEPRVRIHH
Trigger: ATGGTGGATTCTGACCCTTGGCTCCCCAAAGTTCCACAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000667243.1
CDS TCA 90 bp TATGCCTTCAGTGGGAGCTGGGCTCTTCACCATTTGCCATGCAGGTaGGCCTTGGACTTAGCTGGTTCTTGGTGTGCTTGCCACAGACTT +
Preference number: 5 (lower is better)
Translates to: YAFSGSWALHHLPCR*ALDLAGSWCACHRL
Trigger: AAGTCTGTGGCAAGCACACCAAGAACCAGCTAAGTCCAAGGCTCACCTGCATGGCAAATGGTGAAGAGCCCAGCTCCCACTGAAGGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649942.1
ENST00000658791.1
CDS GCA 90 bp GTAAGCAGGCTGCAGGTTCAGTTGCTACACACATTGTTAGGGCCCTaGAAGTGTCTGTTTTTCGTTACCCTCCCCACACAACCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: VSRLQVQLLHTLLGP*KCLFFVTLPTQPSP
Trigger: AGGGCTGGGTTGTGTGGGGAGGGTAACGAAAAACAGACACTTGCAGGGCCCTAACAATGTGTGTAGCAACTGAACCTGCAGCCTGCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654492.1
CDS GCA 90 bp GATGTCAAAGCTGTGCTTTGGACTGAGGTCTGGAGGATAAGCGCATaGCAACAGGCCAAAGAAGAGGTGGACAGTCACGGGGACAAACAG +
Preference number: 5 (lower is better)
Translates to: DVKAVLWTEVWRISA*QQAKEEVDSHGDKQ
Trigger: CTGTTTGTCCCCGTGACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCACAGCTTTGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CCA 90 bp TTGGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACTTTaGACTGAGGTCTGGAGGATAAGCGCATGCCAACAGGCCAAAGAA +
Preference number: 5 (lower is better)
Translates to: LALCKQGCVCSGTEL*TEVWRISACQQAKE
Trigger: TTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS CCA 90 bp TATGGAAGAAGAGGAAAGGCTTCTGTCAAGGGAAACAGCCTTTCGTaGACCGCAGGAAGCTCAGAGAAGCCAGGGAACGCTACTCCCAGA +
Preference number: 5 (lower is better)
Translates to: YGRRGKASVKGNSLS*TAGSSEKPGNATPR
Trigger: TCTGGGAGTAGCGTTCCCTGGCTTCTCTGAGCTTCCTGCGGTCCACGAAAGGCTGTTTCCCTTGACAGAAGCCTTTCCTCTTCTTCCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 90 bp CCGGCCTTGATAGAAATCCAGACAAAATTGTCAGCCTGTGAGCTGTaGCTTTGTCATCAACAGGCTCAGCCATTCTGGCGACAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: PALIEIQTKLSACEL*LCHQQAQPFWRQGQ
Trigger: CTGCCCCTGTCGCCAGAATGGCTGAGCCTGTTGATGACAAAGCCACAGCTCACAGGCTGACAATTTTGTCTGGATTTCTATCAAGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS CCA 90 bp CGGAAGATGGAAGAGGTGATGCTGGCCGCCAGTCCTGCTCCATTTTaGTCCTCACCCCCGGAAAGCACTGAATCCTTGATTGTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: RKMEEVMLAASPAPF*SSPPESTESLIVWL
Trigger: TAACCAAACAATCAAGGATTCAGTGCTTTCCGGGGGTGAGGACCAAAATGGAGCAGGACTGGCGGCCAGCATCACCTCTTCCATCTTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS TCA 90 bp TATGAAGGAGGAAAAGCAGCTCCATGCCTCCATGGAAACCCAGCCTaGAGATCTCAAGATCCTGGTCCCTGGAGAAGCAGATCCATGGCA +
Preference number: 5 (lower is better)
Translates to: YEGGKAAPCLHGNPA*RSQDPGPWRSRSMA
Trigger: TGCCATGGATCTGCTTCTCCAGGGACCAGGATCTTGAGATCTTCAGGCTGGGTTTCCATGGAGGCATGGAGCTGCTTTTCCTCCTTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS TCA 90 bp TTTGGGCTGGCAGCTGGACTTTACCTTCACCATTTGCCATGCAGGTaGGCCTTGGACTTAGCTGGTTCTTGGTGTGCTTGCCACAGACTT +
Preference number: 5 (lower is better)
Translates to: FGLAAGLYLHHLPCR*ALDLAGSWCACHRL
Trigger: AAGTCTGTGGCAAGCACACCAAGAACCAGCTAAGTCCAAGGCTCACCTGCATGGCAAATGGTGAAGGTAAAGTCCAGCTGCCAGCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS GCA 90 bp TCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACCAACCACAATaGGTGGACCTTGTCTGCATCCTGAATCCAGCAAAGCACCTACAA +
Preference number: 5 (lower is better)
Translates to: SANRVVSAPGLNQPQ*VDLVCILNPAKHLQ
Trigger: TTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS CCA 90 bp TCCCTCGGTTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTTaGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACCAA +
Preference number: 5 (lower is better)
Translates to: SLGSLFPTTHCQLEC*LSANRVVSAPGLNQ
Trigger: TTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAACCGAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS TCA 90 bp TGCACTCCCGGCCTTGATAGAAATCCAGACAAAATTGTCAGCCTGTaGGCTGTGGCTTTGTCATCAACAGGCTCAGCCATTCTGGCGACA +
Preference number: 5 (lower is better)
Translates to: CTPGLDRNPDKIVSL*AVALSSTGSAILAT
Trigger: TGTCGCCAGAATGGCTGAGCCTGTTGATGACAAAGCCACAGCTCACAGGCTGACAATTTTGTCTGGATTTCTATCAAGGCCGGGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS GCA 90 bp GCACTGTCAATTAGAATGTTGGCTCTCTGCAAACAGGGTTGTGTCTaGTCCGGGACTGAACCAACCACAATGCGTGGACCTTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: ALSIRMLALCKQGCV*SGTEPTTMRGPCLH
Trigger: ATGCAGACAAGGTCCACGCATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS CCA 90 bp CAGATTCTCCCTTTTCTAAGCCTGCCCTACCCCCTCATGATTCTCTaGATTTCTCACGTTGCACCTGCCTCAGACCACAGGCCACTTAAT +
Preference number: 5 (lower is better)
Translates to: QILPFLSLPYPLMIL*ISHVAPASDHRPLN
Trigger: ATTAAGTGGCCTGTGGTCTGAGGCAGGTGCAACGTGAGAAATCCAGAGAATCATGAGGGGGTAGGGCAGGCTTAGAAAAGGGAGAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000664505.1
ENST00000666387.1
CDS CCA 90 bp TCCCTCGGTTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTTaGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACTTT +
Preference number: 5 (lower is better)
Translates to: SLGSLFPTTHCQLEC*LSANRVVSAPGLNF
Trigger: AAAGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAACCGAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS CCA 90 bp TCAGTCCAGAGGGCTGGCTCCAAAGGACATGCAGTCAACCAGATATaGAAGAAGAGGAAAGGCTTCTGTCAAGGGAAACAGCCTTTCGTG +
Preference number: 5 (lower is better)
Translates to: SVQRAGSKGHAVNQI*KKRKGFCQGKQPFV
Trigger: CACGAAAGGCTGTTTCCCTTGACAGAAGCCTTTCCTCTTCTTCCATATCTGGTTGACTGCATGTCCTTTGGAGCCAGCCCTCTGGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS TCA 90 bp CCACCTAAGGGAACCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PPKGTNHNAWTLSAS*IQQSTYNSKYRQFP
Trigger: AGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGTTCCCTTAGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 90 bp GGAGTTGCCCAAGTCTCCATTCTAGAGCAACAGGGCTGTTTTGAGTaGAGTTATGAAGGAGGAAAAGCAGCTCCATGCCTCCATGGAAAC +
Preference number: 5 (lower is better)
Translates to: GVAQVSILEQQGCFE*SYEGGKAAPCLHGN
Trigger: GTTTCCATGGAGGCATGGAGCTGCTTTTCCTCCTTCATAACTGCACTCAAAACAGCCCTGTTGCTCTAGAATGGAGACTTGGGCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS GCA 90 bp TTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTTGGCTCTCTaGAAACAGGGTTGTGTCTGCTCCGGGACTGAACCAACCACAATG +
Preference number: 5 (lower is better)
Translates to: FTVSHHALSIRMLAL*KQGCVCSGTEPTTM
Trigger: CATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS CCA 90 bp TGGCGCTGTGTAAAAATTCGTGCGCAATTCAAGATGATGAGCCCTTaGCTTGAAGTCAGAGGCCTGAACCCTGGTGCTGGCCTACTTTTA +
Preference number: 5 (lower is better)
Translates to: WRCVKIRAQFKMMSP*LEVRGLNPGAGLLL
Trigger: TAAAAGTAGGCCAGCACCAGGGTTCAGGCCTCTGACTTCAAGCCAAGGGCTCATCATCTTGAATTGCGCACGAATTTTTACACAGCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000661424.1
ENST00000665279.1
ENST00000666323.1
ENST00000666387.1
ENST00000669972.1
CDS CCA 90 bp AAATGGTGCCTATGTGATGTCAAAGCTGTGCTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAGGTGGACAGT +
Preference number: 5 (lower is better)
Translates to: KWCLCDVKAVLWTEV*RISACQQAKEEVDS
Trigger: ACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCACAGCTTTGACATCACATAGGCACCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS TCA 90 bp CTGTGTAAAAATTCGTGCGCAATTCAAGATGATGAGCCCTTGGCTTaGAGTCAGAGGCCTGAACCCTGGTGCTGGCCTACTTTTAGGACT +
Preference number: 5 (lower is better)
Translates to: LCKNSCAIQDDEPLA*SQRPEPWCWPTFRT
Trigger: AGTCCTAAAAGTAGGCCAGCACCAGGGTTCAGGCCTCTGACTTCAAGCCAAGGGCTCATCATCTTGAATTGCGCACGAATTTTTACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000661424.1
ENST00000665279.1
ENST00000666323.1
ENST00000666387.1
ENST00000669972.1
CDS TCA 90 bp AAAGACACCTCACCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KDTSPNHNAWTLSAS*IQQSTYNSKYRQFP
Trigger: AGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGGTGAGGTGTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000652937.1
ENST00000659335.1
ENST00000660203.1
ENST00000666323.1
ENST00000666387.1
CDS TCA 90 bp AAGTGCTTGGTCATCTTTCCATTCAGGGTGAGTTTGGTTACAGCTTaGGTAGGTATAGCTCCACCTAAGGGAACCAACCACAATGCGTGG +
Preference number: 5 (lower is better)
Translates to: KCLVIFPFRVSLVTA*VGIAPPKGTNHNAW
Trigger: CCACGCATTGTGGTTGGTTCCCTTAGGTGGAGCTATACCTACTCAAGCTGTAACCAAACTCACCCTGAATGGAAAGATGACCAAGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 90 bp GCTTCTGTCTTACCCCTGGCCCACATCCTGTTGAAGTTCCCTGACTaGAGCTACAGCAACTTTGATTTTGGAAATGATTTGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: ASVLPLAHILLKFPD*SYSNFDFGNDLRAA
Trigger: AGCTGCTCTCAAATCATTTCCAAAATCAAAGTTGCTGTAGCTGCAGTCAGGGAACTTCAACAGGATGTGGGCCAGGGGTAAGACAGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CCA 90 bp TTTGGAAATGATTTGAGAGCAGCTTGCTGTAAAAGCGCTCTACTTTaGGCTGGCAGCTGGACTTTACCTTCACCATTTGCCATGCAGGTG +
Preference number: 5 (lower is better)
Translates to: FGNDLRAACCKSALL*AGSWTLPSPFAMQV
Trigger: CACCTGCATGGCAAATGGTGAAGGTAAAGTCCAGCTGCCAGCCCAAAGTAGAGCGCTTTTACAGCAAGCTGCTCTCAAATCATTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS TCA 90 bp TCTAGTCATTGTTCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSHCSNHNAWTLSAS*IQQSTYNSKYRQFP
Trigger: AGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGAACAATGACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000657471.1
ENST00000661424.1
ENST00000669972.1
CDS TCA 90 bp AGTTCCCTGACTGCAGCTACAGCAACTTTGATTTTGGAAATGATTTaGGAGCAGCTTGCTGTAAAAGCGCTCTACTTTGGGCTGGCAGCT +
Preference number: 5 (lower is better)
Translates to: SSLTAATATLILEMI*EQLAVKALYFGLAA
Trigger: AGCTGCCAGCCCAAAGTAGAGCGCTTTTACAGCAAGCTGCTCTCAAATCATTTCCAAAATCAAAGTTGCTGTAGCTGCAGTCAGGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS TCA 90 bp CCAGGTAAAGATATGCTTCTGTCTTACCCCTGGCCCACATCCTGTTaGAGTTCCCTGACTGCAGCTACAGCAACTTTGATTTTGGAAATG +
Preference number: 5 (lower is better)
Translates to: PGKDMLLSYPWPTSC*SSLTAATATLILEM
Trigger: CATTTCCAAAATCAAAGTTGCTGTAGCTGCAGTCAGGGAACTTCAACAGGATGTGGGCCAGGGGTAAGACAGAAGCATATCTTTACCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CCA 90 bp CTAATCAGACAACACCAAGGAGTAAAATCCATACTTCAGAGGAACTaGCACCGTCAAGAAACTCACGGAATACCCGTGTGTCTGGGTCAA +
Preference number: 5 (lower is better)
Translates to: LIRQHQGVKSILQRN*HRQETHGIPVCLGQ
Trigger: TTGACCCAGACACACGGGTATTCCGTGAGTTTCTTGACGGTGCCAGTTCCTCTGAAGTATGGATTTTACTCCTTGGTGTTGTCTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS TCA 90 bp TACTTCAATAAAGCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGGCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: YFNKANHNAWTLSAS*IQQSTYNSKYRQFP
Trigger: AGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGCTTTATTGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654492.1
ENST00000657037.1
CDS GCA 90 bp TGCAGCTACAGCAACTTTGATTTTGGAAATGATTTGAGAGCAGCTTaGTGTAAAAGCGCTCTACTTTGGGCTGGCAGCTGGACTTTACCT +
Preference number: 5 (lower is better)
Translates to: CSYSNFDFGNDLRAA*CKSALLWAGSWTLP
Trigger: AGGTAAAGTCCAGCTGCCAGCCCAAAGTAGAGCGCTTTTACAGCAAGCTGCTCTCAAATCATTTCCAAAATCAAAGTTGCTGTAGCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CCA 90 bp GAATCCAGCAAAGCACCTACAACAGTAAGTACAGGCAGTTTCCTTTaGCGCTGTGTAAAAATTCGTGCGCAATTCAAGATGATGAGCCCT +
Preference number: 5 (lower is better)
Translates to: ESSKAPTTVSTGSFL*RCVKIRAQFKMMSP
Trigger: AGGGCTCATCATCTTGAATTGCGCACGAATTTTTACACAGCGCCAAAGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000661424.1
ENST00000665279.1
ENST00000666323.1
ENST00000666387.1
ENST00000669972.1
CDS TCA 90 bp CATTTTCCTTATGGTGAAGGGTGTTTATCAAAGCCCAGTGACTTGTaGAGACCACCAAATGGTGCCTATGTGATGTCAAAGCTGTGCTTT +
Preference number: 5 (lower is better)
Translates to: HFPYGEGCLSKPSDL*RPPNGAYVMSKLCF
Trigger: AAAGCACAGCTTTGACATCACATAGGCACCATTTGGTGGTCTTCACAAGTCACTGGGCTTTGATAAACACCCTTCACCATAAGGAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CCA 90 bp TCAATAAAGTTTCATGCCATCCGGTTCTCAACTGAAATGTTCTCATaGAAGCAGAATGGTCTGGAAGCCAGGTCCTGTGATTTTGCATCA +
Preference number: 5 (lower is better)
Translates to: SIKFHAIRFSTEMFS*KQNGLEARSCDFAS
Trigger: TGATGCAAAATCACAGGACCTGGCTTCCAGACCATTCTGCTTCCATGAGAACATTTCAGTTGAGAACCGGATGGCATGAAACTTTATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000665279.1
CDS TCA 90 bp TCAAATGCATGGATTCCATTACCATCTCTTAAGAAAATGATTCTCTaGTACTTCAATAAAGCCAACCACAATGCGTGGACCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SNAWIPLPSLKKMIL*YFNKANHNAWTLSA
Trigger: TGCAGACAAGGTCCACGCATTGTGGTTGGCTTTATTGAAGTATCAGAGAATCATTTTCTTAAGAGATGGTAATGGAATCCATGCATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000654492.1
ENST00000657037.1
CDS CCA 90 bp TTTCTAAAAGCCAGGTCCCTTGCCAATATATCCGGATCTTTATCTTaGAGAGTTTATCTAATCAGACAACACCAAGGAGTAAAATCCATA +
Preference number: 5 (lower is better)
Translates to: FLKARSLANISGSLS*RVYLIRQHQGVKSI
Trigger: TATGGATTTTACTCCTTGGTGTTGTCTGATTAGATAAACTCTCCAAGATAAAGATCCGGATATATTGGCAAGGGACCTGGCTTTTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS TCA 90 bp TTTGGACATTCAAATAAATCTGGACCTACACATGGAAAACGAAATTaGATTACAATTAGTATGCCCCCTACAGAAATCTGTGGAGTTTGC +
Preference number: 5 (lower is better)
Translates to: FGHSNKSGPTHGKRN*ITISMPPTEICGVC
Trigger: GCAAACTCCACAGATTTCTGTAGGGGGCATACTAATTGTAATTCAATTTCGTTTTCCATGTGTAGGTCCAGATTTATTTGAATGTCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374432.4
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
ENST00000667243.1
CDS TCA 90 bp GATTTATTTCAAATGCATGGATTCCATTACCATCTCTTAAGAAAATaGTTCTCTGATACTTCAATAAAGCTTTGGACTGAGGTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: DLFQMHGFHYHLLRK*FSDTSIKLWTEVWR
Trigger: CCTCCAGACCTCAGTCCAAAGCTTTATTGAAGTATCAGAGAATCATTTTCTTAAGAGATGGTAATGGAATCCATGCATTTGAAATAAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000657471.1
CDS CAA 90 bp CAGTGGGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATGCTTaGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: QWELGSGGEVRGWNA*ARGAGWLHACLLGA
Trigger: CGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS GCA 72 bp GGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: GAGLWRRGPGVE*FGQRSRLAPRL
Trigger: CAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS GCA 72 bp TTCACTTCCTGCCTGGTGCTTCCCAGCGCGCCCTGCTaGCAGGAGAACGGCGGCAGGCAGGCGTCTTTTCAG +
Preference number: 6 (lower is better)
Translates to: FTSCLVLPSAPC*QENGGRQASFQ
Trigger: CTGAAAAGACGCCTGCCTGCCGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 72 bp CACCTGTGGGGCAGGTTTCCCAGGCTCTGGGGCCACTaGCCGTCTGGACAGGAAGTACCTGGAGGAGAGGTC +
Preference number: 6 (lower is better)
Translates to: HLWGRFPRLWGH*PSGQEVPGGEV
Trigger: GACCTCTCCTCCAGGTACTTCCTGTCCAGACGGGCAGTGGCCCCAGAGCCTGGGAAACCTGCCCCACAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp GCTCTGGGGCCACTGCCCGTCTGGACAGGAAGTACCTaGAGGAGAGGTCCGGGGGTGGAATGCTTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: ALGPLPVWTGST*RRGPGVECFGQ
Trigger: CTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGACGGGCAGTGGCCCCAGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp TGGGCTCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: WALEERSGGGML*PEEQAGSTLVC
Trigger: GCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGAGCCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS CCA 72 bp CCTTCTCCTCAGAGGTCTGCTCCAAGGGCCTTGACCTaGCGGCCCGCTTCATGGAGTGAGCAGGCCACGCGT +
Preference number: 6 (lower is better)
Translates to: PSPQRSAPRALT*RPASWSEQATR
Trigger: ACGCGTGGCCTGCTCACTCCATGAAGCGGGCCGCCAGGTCAAGGCCCTTGGAGCAGACCTCTGAGGAGAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CAA 90 bp TCTGGACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTGGAATGCTTaGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: SGQEVPGGEVRGWNA*ARGAGWLHACLLGA
Trigger: CGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS GCA 72 bp CCGCTGACAACCGGAAATTCTTCACTTCCTGCCTGGTaGTTCCCAGCGCGCCCTGCTGCCAGGAGAACGGCG +
Preference number: 6 (lower is better)
Translates to: PLTTGNSSLPAW*FPARPAARRTA
Trigger: CGCCGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS CCA 72 bp AGGAGGTCCCCTGAGCCCAGTTCCTGGACATGGCCCTaGGACTTCTGTCCCTGCAGCCTCTGGCCACCATGT +
Preference number: 6 (lower is better)
Translates to: RRSPEPSSWTWP*DFCPCSLWPPC
Trigger: ACATGGTGGCCAGAGGCTGCAGGGACAGAAGTCCCAGGGCCATGTCCAGGAACTGGGCTCAGGGGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
ENST00000664505.1
ENST00000667243.1
CDS CCA 72 bp TCTGCTCCAAGGGCCTTGACCTGGCGGCCCGCTTCATaGAGTGAGCAGGCCACGCGTGCAGTACATGGAGCT +
Preference number: 6 (lower is better)
Translates to: SAPRALTWRPAS*SEQATRAVHGA
Trigger: AGCTCCATGTACTGCACGCGTGGCCTGCTCACTCCATGAAGCGGGCCGCCAGGTCAAGGCCCTTGGAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CAA 90 bp TCCACATCTCTTCTTCCTGGAGGAGAGGTCCGGGGGTGGAATGCTTaGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: STSLLPGGEVRGWNA*ARGAGWLHACLLGA
Trigger: CGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAAGAGATGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CAA 90 bp CCGGGGGTGGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTaGTCTGCTGGGGGCGGGATGATTCCTTTGGACTCATGGCATCTG +
Preference number: 6 (lower is better)
Translates to: PGVECFGQRSRLAPR*SAGGGMIPLDSWHL
Trigger: CAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS TCA 72 bp TCCAAGGGCCTTGACCTGGCGGCCCGCTTCATGGAGTaGGCAGGCCACGCGTGCAGTACATGGAGCTTAGGA +
Preference number: 6 (lower is better)
Translates to: SKGLDLAARFME*AGHACSTWSLG
Trigger: TCCTAAGCTCCATGTACTGCACGCGTGGCCTGCTCACTCCATGAAGCGGGCCGCCAGGTCAAGGCCCTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 72 bp CATCCCTCCGCTGACAACCGGAAATTCTTCACTTCCTaGCTGGTGCTTCCCAGCGCGCCCTGCTGCCAGGAG +
Preference number: 6 (lower is better)
Translates to: HPSADNRKFFTS*LVLPSAPCCQE
Trigger: CTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 72 bp ACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: TGSTWRRGPGVE*FGQRSRLAPRL
Trigger: CAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp TTCTTCCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: FFLEERSGGGML*PEEQAGSTLVC
Trigger: GCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CCA 72 bp CCTCCGCTGACAACCGGAAATTCTTCACTTCCTGCCTaGTGCTTCCCAGCGCGCCCTGCTGCCAGGAGAACG +
Preference number: 6 (lower is better)
Translates to: PPLTTGNSSLPA*CFPARPAARRT
Trigger: CGTTCTCCTGGCAGCAGGGCGCGCTGGGAAGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS CCA 72 bp AAGTACCTGGAGGAGAGGTCCGGGGGTGGAATGCTTTaGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGC +
Preference number: 6 (lower is better)
Translates to: KYLEERSGGGML*PEEQAGSTLVC
Trigger: GCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp TCTGGACAGGAAGTACCTGGAGGAGAGGTCCGGGGGTaGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: SGQEVPGGEVRG*NALARGAGWLH
Trigger: GTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGTACTTCCTGTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000649239.1
ENST00000667243.1
CDS GCA 72 bp CTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTaGTGGGGGCGGGATGATTCCTTTGGACTCATGGCA +
Preference number: 6 (lower is better)
Translates to: LWPEEQAGSTLV*WGRDDSFGLMA
Trigger: TGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS GCA 72 bp ATCTCTTCTTCCTGGAGGAGAGGTCCGGGGGTGGAATaGTTTGGCCAGAGGAGCAGGCTGGCTCCACGCTTG +
Preference number: 6 (lower is better)
Translates to: ISSSWRRGPGVE*FGQRSRLAPRL
Trigger: CAAGCGTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAAGAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CCA 72 bp TGGCCAGAGGAGCAGGCTGGCTCCACGCTTGTCTGCTaGGGGCGGGATGATTCCTTTGGACTCATGGCATCT +
Preference number: 6 (lower is better)
Translates to: WPEEQAGSTLVC*GRDDSFGLMAS
Trigger: AGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCTCCTCTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS CCA 72 bp TCCACATCTCTTCTTCCTGGAGGAGAGGTCCGGGGGTaGAATGCTTTGGCCAGAGGAGCAGGCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: STSLLPGGEVRG*NALARGAGWLH
Trigger: GTGGAGCCAGCCTGCTCCTCTGGCCAAAGCATTCCACCCCCGGACCTCTCCTCCAGGAAGAAGAGATGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000661424.1
ENST00000666387.1
CDS CCA 72 bp CATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTCTGGAGGAGAGGTCCGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: HLVLRIWVICLQ*ELGSGGEVRGW
Trigger: CCACCCCCGGACCTCTCCTCCAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000664505.1
CDS TCA 72 bp AGGGCAAGGCATGTGGGAAGGGATGAGATGCTTCCATaGCTGCCCCAGGCACCACCCTCCAGGAACCTCCAT +
Preference number: 6 (lower is better)
Translates to: RARHVGRDEMLP*LPQAPPSRNLH
Trigger: ATGGAGGTTCCTGGAGGGTGGTGCCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS TCA 72 bp CCCGGGCTTCTTTCACTTGGCCCTGACAAGGCTGGATaGGAGGGGGCATTCTTGCTCCTCATCAGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PGLLSLGPDKAG*EGAFLLLIRGC
Trigger: GCAGCCTCTGATGAGGAGCAAGAATGCCCCCTCTCATCCAGCCTTGTCAGGGCCAAGTGAAAGAAGCCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS TCA 72 bp CAGCCATTCTGGCGACAGGGGCAGGAGGCTTTGGACTaGGGTCTGGAGGATAAGCGCATGCCAACAGGCCAA +
Preference number: 6 (lower is better)
Translates to: QPFWRQGQEALD*GLEDKRMPTGQ
Trigger: TTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCTGCCCCTGTCGCCAGAATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS GCA 72 bp CAAGGCATGTGGGAAGGGATGAGATGCTTCCATGACTaGCCCAGGCACCACCCTCCAGGAACCTCCATGTGC +
Preference number: 6 (lower is better)
Translates to: QGMWEGMRCFHD*PRHHPPGTSMC
Trigger: GCACATGGAGGTTCCTGGAGGGTGGTGCCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS GCA 72 bp TCTTCAACTATGGTGCAGCCCTTCTCCTCAGAGGTCTaGTCCAAGGGCCTTGACCTGGCGGCCCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: SSTMVQPFSSEV*SKGLDLAARFM
Trigger: CATGAAGCGGGCCGCCAGGTCAAGGCCCTTGGAGCAGACCTCTGAGGAGAAGGGCTGCACCATAGTTGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 72 bp TTTGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTTaGCCCCCGACCATCTTCAACTATGGTGCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: FAPRKPVHRGAA*PPTIFNYGAAL
Trigger: AAGGGCTGCACCATAGTTGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CAA 72 bp GCTCCACGCTTGTCTGCTGGGGGCGGGATGATTCCTTaGGACTCATGGCATCTGGCCTCTCTGGCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: APRLSAGGGMIP*DSWHLASLAAD
Trigger: ATCTGCTGCCAGAGAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS CAA 72 bp GACAGAGACGGGGCTGAGAGAGAAACGATGCCAGCATaGACTACTGAGGCTCCTTGGGCAGCTTCCCCAGGC +
Preference number: 6 (lower is better)
Translates to: DRDGAERETMPA*TTEAPWAASPG
Trigger: GCCTGGGGAAGCTGCCCAAGGAGCCTCAGTAGTCAATGCTGGCATCGTTTCTCTCTCAGCCCCGTCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CAA 72 bp ATTTGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTaGGCCCCCGACCATCTTCAACTATGGTGCAGCCCT +
Preference number: 6 (lower is better)
Translates to: ICSQKAGAQGSS*APDHLQLWCSP
Trigger: AGGGCTGCACCATAGTTGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CAA 90 bp AGCAGGCTGGCTCCACGCTTGTCTGCTGGGGGCGGGATGATTCCTTaGGACTCATGGCATCTGGCCTCTCTGGCAGCAGATTCTCCCTTT +
Preference number: 6 (lower is better)
Translates to: SRLAPRLSAGGGMIP*DSWHLASLAADSPF
Trigger: AAAGGGAGAATCTGCTGCCAGAGAGGCCAGATGCCATGAGTCCAAAGGAATCATCCCGCCCCCAGCAGACAAGCGTGGAGCCAGCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000661424.1
ENST00000664505.1
ENST00000666387.1
ENST00000667243.1
CDS CAA 90 bp CCAGCATACATTTGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTaGGCCCCCGACCATCTTCAACTATGGTGCAGCCCTTCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: PAYICSQKAGAQGSS*APDHLQLWCSPSPQ
Trigger: CTGAGGAGAAGGGCTGCACCATAGTTGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS TCA 72 bp GCTTGCCACAGACTTGGTGACGCCCCATCCCTCCGCTaGCAACCGGAAATTCTTCACTTCCTGCCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: ACHRLGDAPSLR*QPEILHFLPGA
Trigger: AGCACCAGGCAGGAAGTGAAGAATTTCCGGTTGTCAGCGGAGGGATGGGGCGTCACCAAGTCTGTGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
CDS GCA 72 bp AGATGCATAGGGCAAGGCATGTGGGAAGGGATGAGATaGTTCCATGACTGCCCCAGGCACCACCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: RCIGQGMWEGMR*FHDCPRHHPPG
Trigger: TCCTGGAGGGTGGTGCCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTGCCCTATGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS CCA 72 bp CGAAAGCTCAGGCCGGTGCATCTGGTTCTCAGGATCTaGGTCATATGCCTTCAGTGGGAGCTGGGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: RKLRPVHLVLRI*VICLQWELGSV
Trigger: CACAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCACCGGCCTGAGCTTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp TCTGGCGACAGGGGCAGGAGGCTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: SGDRGRRLWTEV*RISACQQAKEE
Trigger: CTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCTGCCCCTGTCGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS TCA 72 bp GGATCTGGGTCATATGCCTTCAGTGGGAGCTGGGCTTaGGGTGTCTTGTCCTTCTCCCTCGGGATGCTCATC +
Preference number: 6 (lower is better)
Translates to: GSGSYAFSGSWA*GVLSFSLGMLI
Trigger: GATGAGCATCCCGAGGGAGAAGGACAAGACACCTCAAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS TCA 72 bp GGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTaGACCAACCACAATGCGTGGACCTTGTCTGCATCC +
Preference number: 6 (lower is better)
Translates to: GSLQTGLCLLRD*TNHNAWTLSAS
Trigger: GGATGCAGACAAGGTCCACGCATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS TCA 72 bp CCTTCGTGGTTCAGGACAGACGGAAGATGGAAGAGGTaGTGCTGGCCGCCAGTCCTGCTCCATTTTGGTCCT +
Preference number: 6 (lower is better)
Translates to: PSWFRTDGRWKR*CWPPVLLHFGP
Trigger: AGGACCAAAATGGAGCAGGACTGGCGGCCAGCATCACCTCTTCCATCTTCCGTCTGTCCTGAACCACGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS GCA 72 bp TGGATTTCCAGCATACATTTGCTCCCAGAAAGCCGGTaGACAGGGGAGCAGCTTGGCCCCCGACCATCTTCA +
Preference number: 6 (lower is better)
Translates to: WISSIHLLPESR*TGEQLGPRPSS
Trigger: TGAAGATGGTCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 72 bp GCTGTGCTTTGGACTGAGGTCTGGAGGATAAGCGCATaGCAACAGGCCAAAGAAGAGGTGGACAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: AVLWTEVWRISA*QQAKEEVDSHG
Trigger: CCCGTGACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS GCA 72 bp AGGAGGCTTTGGACTGAGGTCTGGAGGATAAGCGCATaGCAACAGGCCAAAGAAGAGGTGGACAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: RRLWTEVWRISA*QQAKEEVDSHG
Trigger: CCCGTGACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS CCA 72 bp CCTCCATGGAAACCCAGCCTGAAGATCTCAAGATCCTaGTCCCTGGAGAAGCAGATCCATGGCACCGAACCC +
Preference number: 6 (lower is better)
Translates to: PPWKPSLKISRS*SLEKQIHGTEP
Trigger: GGGTTCGGTGCCATGGATCTGCTTCTCCAGGGACCAGGATCTTGAGATCTTCAGGCTGGGTTTCCATGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS CCA 72 bp CGAAAGCTCAGGCCGGTGCATCTGGTTCTCAGGATCTaGGTCATATGCCTTCAGTGGGAGCTGGGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: RKLRPVHLVLRI*VICLQWELGSS
Trigger: TGAAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATGCACCGGCCTGAGCTTTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649942.1
ENST00000658791.1
CDS CAA 90 bp CTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTGGGAGCTGGGCTaGAGGTGTCTTGTCCTTCTCCCTCGGGATGCTCATCTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: LVLRIWVICLQWELG*RCLVLLPRDAHLPD
Trigger: ATCTGGGAGATGAGCATCCCGAGGGAGAAGGACAAGACACCTCAAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CAA 90 bp CCTTCAATCACTGCCAAGAGAAAGGCTTGGATTTCCAGCATACATTaGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTTGGCCCCCGA +
Preference number: 6 (lower is better)
Translates to: PSITAKRKAWISSIH*LPESRCTGEQLGPR
Trigger: TCGGGGGCCAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCAAGCCTTTCTCTTGGCAGTGATTGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS TCA 72 bp AGTGGGAGCTGGGCTCTTCACCATTTGCCATGCAGGTaGGCCTTGGACTTAGCTGGTTCTTGGTGTGCTTGC +
Preference number: 6 (lower is better)
Translates to: SGSWALHHLPCR*ALDLAGSWCAC
Trigger: GCAAGCACACCAAGAACCAGCTAAGTCCAAGGCTCACCTGCATGGCAAATGGTGAAGAGCCCAGCTCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649942.1
ENST00000658791.1
CDS GCA 72 bp GAAGGTGGCAAACAGGGCGGAAGGGAGCCAAGAACTTaGTCGTTACAAAGGCAGGAACCCTACTCTGTTCCC +
Preference number: 6 (lower is better)
Translates to: EGGKQGGREPRT*SLQRQEPYSVP
Trigger: GGGAACAGAGTAGGGTTCCTGCCTTTGTAACGAGCAAGTTCTTGGCTCCCTTCCGCCCTGTTTGCCACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CCA 72 bp CATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTCTGTGGAACTTTGGGGAGCCAAG +
Preference number: 6 (lower is better)
Translates to: HLVLRIWVICLQ*ELGSVELWGAK
Trigger: CTTGGCTCCCCAAAGTTCCACAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374432.4
ENST00000649239.1
ENST00000667243.1
CDS CCA 72 bp GATCTCAAGATCCTGGTCCCTGGAGAAGCAGATCCATaGCACCGAACCCCACACCGTACAGCCCATCTAAAG +
Preference number: 6 (lower is better)
Translates to: DLKILVPGEADP*HRTPHRTAHLK
Trigger: CTTTAGATGGGCTGTACGGTGTGGGGTTCGGTGCCATGGATCTGCTTCTCCAGGGACCAGGATCTTGAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS CCA 72 bp AGAGGAAAGGCTTCTGTCAAGGGAAACAGCCTTTCGTaGACCGCAGGAAGCTCAGAGAAGCCAGGGAACGCT +
Preference number: 6 (lower is better)
Translates to: RGKASVKGNSLS*TAGSSEKPGNA
Trigger: AGCGTTCCCTGGCTTCTCTGAGCTTCCTGCGGTCCACGAAAGGCTGTTTCCCTTGACAGAAGCCTTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 72 bp GAAGAGGTGATGCTGGCCGCCAGTCCTGCTCCATTTTaGTCCTCACCCCCGGAAAGCACTGAATCCTTGATT +
Preference number: 6 (lower is better)
Translates to: EEVMLAASPAPF*SSPPESTESLI
Trigger: AATCAAGGATTCAGTGCTTTCCGGGGGTGAGGACCAAAATGGAGCAGGACTGGCGGCCAGCATCACCTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS CAA 72 bp GGAAGGTGGCAAACAGGGCGGAAGGGAGCCAAGAACTaGCTCGTTACAAAGGCAGGAACCCTACTCTGTTCC +
Preference number: 6 (lower is better)
Translates to: GRWQTGRKGAKN*LVTKAGTLLCS
Trigger: GGAACAGAGTAGGGTTCCTGCCTTTGTAACGAGCAAGTTCTTGGCTCCCTTCCGCCCTGTTTGCCACCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CAA 90 bp AGGGCCCGGGATGAGTCACTCTCGTTCCAGCCTGGCGTCTTCCCTTaGGGAGCCTTTCTGCAGACAGAAAACTGTAGCCAAATTAGGACA +
Preference number: 6 (lower is better)
Translates to: RARDESLSFQPGVFP*GAFLQTENCSQIRT
Trigger: TGTCCTAATTTGGCTACAGTTTTCTGTCTGCAGAAAGGCTCCCAAAGGGAAGACGCCAGGCTGGAACGAGAGTGACTCATCCCGGGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS TCA 72 bp GGAAAAGCAGCTCCATGCCTCCATGGAAACCCAGCCTaGAGATCTCAAGATCCTGGTCCCTGGAGAAGCAGA +
Preference number: 6 (lower is better)
Translates to: GKAAPCLHGNPA*RSQDPGPWRSR
Trigger: TCTGCTTCTCCAGGGACCAGGATCTTGAGATCTTCAGGCTGGGTTTCCATGGAGGCATGGAGCTGCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS GCA 72 bp ACTGAACTTTGGACTGAGGTCTGGAGGATAAGCGCATaGCAACAGGCCAAAGAAGAGGTGGACAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: TELWTEVWRISA*QQAKEEVDSHG
Trigger: CCCGTGACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGTTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS GCA 72 bp TTACATCACTGGCCATTGTTGATGGACTTAACCTTCTaGCCGTCTCTCCTCCCCAAAGGTCAGGGGTGTGGG +
Preference number: 6 (lower is better)
Translates to: LHHWPLLMDLTF*PSLLPKGQGCG
Trigger: CCCACACCCCTGACCTTTGGGGAGGAGAGACGGGCAGAAGGTTAAGTCCATCAACAATGGCCAGTGATGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS GCA 72 bp AGGGTTGTGTCTGCTCCGGGACTGAACCAACCACAATaGGTGGACCTTGTCTGCATCCTGAATCCAGCAAAG +
Preference number: 6 (lower is better)
Translates to: RVVSAPGLNQPQ*VDLVCILNPAK
Trigger: CTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS GCA 72 bp CTGCCAAGAGAAAGGCTTGGATTTCCAGCATACATTTaGTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LPRERLGFPAYI*SQKAGAQGSSL
Trigger: CAAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCAAGCCTTTCTCTTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 72 bp TGTGTCTGCTCCGGGACTGAACTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: CVCSGTELWTEV*RISACQQAKEE
Trigger: CTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGTTCAGTCCCGGAGCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS CCA 72 bp CATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTTGAGGTGTCTTGTCCTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: HLVLRIWVICLQ*ELGLRCLVLLP
Trigger: AGGGAGAAGGACAAGACACCTCAAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CCA 72 bp CATCTGGTTCTCAGGATCTGGGTCATATGCCTTCAGTaGGAGCTGGGCTCTTCACCATTTGCCATGCAGGTG +
Preference number: 6 (lower is better)
Translates to: HLVLRIWVICLQ*ELGSSPFAMQV
Trigger: CACCTGCATGGCAAATGGTGAAGAGCCCAGCTCCCACTGAAGGCATATGACCCAGATCCTGAGAACCAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649942.1
ENST00000658791.1
CDS CCA 72 bp CCGAACCCCACACCGTACAGCCCATCTAAAGGTCAATaGCACCCAGAACAAGATAGAGGAACAGCACCACAG +
Preference number: 6 (lower is better)
Translates to: PNPTPYSPSKGQ*HPEQDRGTAPQ
Trigger: CTGTGGTGCTGTTCCTCTATCTTGTTCTGGGTGCCATTGACCTTTAGATGGGCTGTACGGTGTGGGGTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659335.1
CDS CAA 72 bp GCAGGTCTGTTTGACCCCCGAGGTACTCAGATCTGCTaGCCCCTGAAGTCTGTGAAAGCAACAACCAGCTCT +
Preference number: 6 (lower is better)
Translates to: AGLFDPRGTQIC*PLKSVKATTSS
Trigger: AGAGCTGGTTGTTGCTTTCACAGACTTCAGGGGCAAGCAGATCTGAGTACCTCGGGGGTCAAACAGACCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CAA 90 bp GAAATAGAGGGAAGGTGGCAAACAGGGCGGAAGGGAGCCAAGAACTaGCTCGTTACAAAGGCAGGAACCCTACTCTGTTCCCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: EIEGRWQTGRKGAKN*LVTKAGTLLCSQRP
Trigger: AGGCCTTTGGGAACAGAGTAGGGTTCCTGCCTTTGTAACGAGCAAGTTCTTGGCTCCCTTCCGCCCTGTTTGCCACCTTCCCTCTATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS TCA 72 bp AATTCGTGCGCAATTCAAGATGATGAGCCCTTGGCTTaGAGTCAGAGGCCTGAACCCTGGTGCTGGCCTACT +
Preference number: 6 (lower is better)
Translates to: NSCAIQDDEPLA*SQRPEPWCWPT
Trigger: AGTAGGCCAGCACCAGGGTTCAGGCCTCTGACTTCAAGCCAAGGGCTCATCATCTTGAATTGCGCACGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000661424.1
ENST00000665279.1
ENST00000666323.1
ENST00000666387.1
ENST00000669972.1
CDS TCA 72 bp GCAGCTGGACTTTACCTTCACCATTTGCCATGCAGGTaGGCCTTGGACTTAGCTGGTTCTTGGTGTGCTTGC +
Preference number: 6 (lower is better)
Translates to: AAGLYLHHLPCR*ALDLAGSWCAC
Trigger: GCAAGCACACCAAGAACCAGCTAAGTCCAAGGCTCACCTGCATGGCAAATGGTGAAGGTAAAGTCCAGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS TCA 72 bp CACTCTGGAGCCCTTCATGGAGTCTGTGGGGAAATCTaGTTCTCTCCACGTTGCAGAGGGGTTTATGGAGGT +
Preference number: 6 (lower is better)
Translates to: HSGALHGVCGEI*FSPRCRGVYGG
Trigger: ACCTCCATAAACCCCTCTGCAACGTGGAGAGAATCAGATTTCCCCACAGACTCCATGAAGGGCTCCAGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649239.1
CDS TCA 72 bp TGTGGGAAGGATTGCTCCATCAGTCAGCCGAATTCCTaGGAATCACAGGGTCCACGGCTTTCAGGTGCATCT +
Preference number: 6 (lower is better)
Translates to: CGKDCSISQPNS*ESQGPRLSGAS
Trigger: AGATGCACCTGAAAGCCGTGGACCCTGTGATTCTCAGGAATTCGGCTGACTGATGGAGCAATCCTTCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS GCA 72 bp ATAAAGCTTTGGACTGAGGTCTGGAGGATAAGCGCATaGCAACAGGCCAAAGAAGAGGTGGACAGTCACGGG +
Preference number: 6 (lower is better)
Translates to: IKLWTEVWRISA*QQAKEEVDSHG
Trigger: CCCGTGACTGTCCACCTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657471.1
CDS GCA 72 bp TCCCACCACGCACTGTCAATTAGAATGTTGGCTCTCTaGAAACAGGGTTGTGTCTGCTCCGGGACTGAACCA +
Preference number: 6 (lower is better)
Translates to: SHHALSIRMLAL*KQGCVCSGTEP
Trigger: TGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS CCA 72 bp AGGATACAGATGAAGAGATGCATAGGGCAAGGCATGTaGGAAGGGATGAGATGCTTCCATGACTGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: RIQMKRCIGQGM*EGMRCFHDCPR
Trigger: CCTGGGGCAGTCATGGAAGCATCTCATCCCTTCCCACATGCCTTGCCCTATGCATCTCTTCATCTGTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS CCA 72 bp GCTTGCTGTAAAAGCGCTCTACTTTGGGCTGGCAGCTaGACTTTACCTTCACCATTTGCCATGCAGGTGAGC +
Preference number: 6 (lower is better)
Translates to: ACCKSALLWAGS*TLPSPFAMQVS
Trigger: GCTCACCTGCATGGCAAATGGTGAAGGTAAAGTCCAGCTGCCAGCCCAAAGTAGAGCGCTTTTACAGCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS CAA 72 bp GTCCAGGATCTGGTGAGCTGCCCCATATCACACGGCTaGCAAGTGGAATCCTGTCTGAAAGACACCAAATCC +
Preference number: 6 (lower is better)
Translates to: VQDLVSCPISHG*QVESCLKDTKS
Trigger: GGATTTGGTGTCTTTCAGACAGGATTCCACTTGCAAGCCGTGTGATATGGGGCAGCTCACCAGATCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649239.1
CDS CAA 72 bp ACTGCCAAGAGAAAGGCTTGGATTTCCAGCATACATTaGCTCCCAGAAAGCCGGTGCACAGGGGAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: TAKRKAWISSIH*LPESRCTGEQL
Trigger: AAGCTGCTCCCCTGTGCACCGGCTTTCTGGGAGCAAATGTATGCTGGAAATCCAAGCCTTTCTCTTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CAA 90 bp TTCCCTCGGTTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTaGGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACCA +
Preference number: 6 (lower is better)
Translates to: FPRFTVSHHALSIRM*ALCKQGCVCSGTEP
Trigger: TGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAACCGAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS CAA 90 bp TTCCCTCGGTTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTaGGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGACTGAACTT +
Preference number: 6 (lower is better)
Translates to: FPRFTVSHHALSIRM*ALCKQGCVCSGTEL
Trigger: AAGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAACCGAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS GCA 72 bp TCCCACCACGCACTGTCAATTAGAATGTTGGCTCTCTaGAAACAGGGTTGTGTCTGCTCCGGGACTGAACTT +
Preference number: 6 (lower is better)
Translates to: SHHALSIRMLAL*KQGCVCSGTEL
Trigger: AAGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000649239.1
CDS GCA 72 bp ATTAGAATGTTGGCTCTCTGCAAACAGGGTTGTGTCTaGTCCGGGACTGAACCAACCACAATGCGTGGACCT +
Preference number: 6 (lower is better)
Translates to: IRMLALCKQGCV*SGTEPTTMRGP
Trigger: AGGTCCACGCATTGTGGTTGGTTCAGTCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665279.1
CDS GCA 72 bp AGCAGGCCACGCGTGCAGTACATGGAGCTTAGGAAGTaGTTGGTCATCTTTCCATTCAGGGTGAGTTTGGTT +
Preference number: 6 (lower is better)
Translates to: SRPRVQYMELRK*LVIFPFRVSLV
Trigger: AACCAAACTCACCCTGAATGGAAAGATGACCAAGCACTTCCTAAGCTCCATGTACTGCACGCGTGGCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 72 bp TCACTGTTTCCCACCACGCACTGTCAATTAGAATGTTaGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: SLFPTTHCQLEC*LSANRVVSAPG
Trigger: TCCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000665279.1
CDS CCA 72 bp ATGAGTCACTCTCGTTCCAGCCTGGCGTCTTCCCTTTaGGAGCCTTTCTGCAGACAGAAAACTGTAGCCAAA +
Preference number: 6 (lower is better)
Translates to: MSHSRSSLASSL*EPFCRQKTVAK
Trigger: TTTGGCTACAGTTTTCTGTCTGCAGAAAGGCTCCCAAAGGGAAGACGCCAGGCTGGAACGAGAGTGACTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CAA 72 bp TTCACTGTTTCCCACCACGCACTGTCAATTAGAATGTaGGCTCTCTGCAAACAGGGTTGTGTCTGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: FTVSHHALSIRM*ALCKQGCVCSG
Trigger: CCCGGAGCAGACACAACCCTGTTTGCAGAGAGCCAACATTCTAATTGACAGTGCGTGGTGGGAAACAGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000665279.1
CDS TCA 72 bp TCACCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: SPNHNAWTLSAS*IQQSTYNSKYR
Trigger: CCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000652937.1
ENST00000659335.1
ENST00000660203.1
ENST00000666323.1
ENST00000666387.1
CDS TCA 72 bp GGAACCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: GTNHNAWTLSAS*IQQSTYNSKYR
Trigger: CCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS GCA 72 bp CTGCAGGTTCAGTTGCTACACACATTGTTAGGGCCCTaGAAGTGTCTGTTTTTCGTTACCCTCCCCACACAA +
Preference number: 6 (lower is better)
Translates to: LQVQLLHTLLGP*KCLFFVTLPTQ
Trigger: TTGTGTGGGGAGGGTAACGAAAAACAGACACTTGCAGGGCCCTAACAATGTGTGTAGCAACTGAACCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654492.1
CDS CCA 72 bp AGGGCTGGCTCCAAAGGACATGCAGTCAACCAGATATaGAAGAAGAGGAAAGGCTTCTGTCAAGGGAAACAG +
Preference number: 6 (lower is better)
Translates to: RAGSKGHAVNQI*KKRKGFCQGKQ
Trigger: CTGTTTCCCTTGACAGAAGCCTTTCCTCTTCTTCCATATCTGGTTGACTGCATGTCCTTTGGAGCCAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 72 bp CTATGTGATGTCAAAGCTGTGCTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: LCDVKAVLWTEV*RISACQQAKEE
Trigger: CTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCACAGCTTTGACATCACATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CAA 72 bp CCTCATGGGCTAACATCCATAAGAGGACGTTACCAGTaGAGAACCCATGGACTTAGAGGTGAAACTGCCTGC +
Preference number: 6 (lower is better)
Translates to: PHGLTSIRGRYQ*RTHGLRGETAC
Trigger: GCAGGCAGTTTCACCTCTAAGTCCATGGGTTCTCAACTGGTAACGTCCTCTTATGGATGTTAGCCCATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS CAA 72 bp AGGCCACGCGTGCAGTACATGGAGCTTAGGAAGTGCTaGGTCATCTTTCCATTCAGGGTGAGTTTGGTTACA +
Preference number: 6 (lower is better)
Translates to: RPRVQYMELRKC*VIFPFRVSLVT
Trigger: TGTAACCAAACTCACCCTGAATGGAAAGATGACCAAGCACTTCCTAAGCTCCATGTACTGCACGCGTGGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS TCA 72 bp GCCTGCAGCTTGCTTCTATCTGAATTTCACCTGAGGTaGACAAATCTGTGCCAGAAGGAGTTGCCCAAGTCT +
Preference number: 6 (lower is better)
Translates to: ACSLLLSEFHLR*TNLCQKELPKS
Trigger: AGACTTGGGCAACTCCTTCTGGCACAGATTTGTTCACCTCAGGTGAAATTCAGATAGAAGCAAGCTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS TCA 72 bp TGTTCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: CSNHNAWTLSAS*IQQSTYNSKYR
Trigger: CCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000657471.1
ENST00000661424.1
ENST00000669972.1
CDS TCA 72 bp GATATGCTTCTGTCTTACCCCTGGCCCACATCCTGTTaGAGTTCCCTGACTGCAGCTACAGCAACTTTGATT +
Preference number: 6 (lower is better)
Translates to: DMLLSYPWPTSC*SSLTAATATLI
Trigger: AATCAAAGTTGCTGTAGCTGCAGTCAGGGAACTTCAACAGGATGTGGGCCAGGGGTAAGACAGAAGCATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000653073.1
CDS TCA 72 bp AAAGCCAACCACAATGCGTGGACCTTGTCTGCATCCTaGATCCAGCAAAGCACCTACAACAGTAAGTACAGG +
Preference number: 6 (lower is better)
Translates to: KANHNAWTLSAS*IQQSTYNSKYR
Trigger: CCTGTACTTACTGTTGTAGGTGCTTTGCTGGATTCAGGATGCAGACAAGGTCCACGCATTGTGGTTGGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000654492.1
ENST00000657037.1
CDS CAA 72 bp TGTGTAAGCAGGCTGCAGGTTCAGTTGCTACACACATaGTTAGGGCCCTGCAAGTGTCTGTTTTTCGTTACC +
Preference number: 6 (lower is better)
Translates to: CVSRLQVQLLHT*LGPCKCLFFVT
Trigger: GGTAACGAAAAACAGACACTTGCAGGGCCCTAACAATGTGTGTAGCAACTGAACCTGCAGCCTGCTTACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000654492.1
CDS TCA 72 bp GCCCCATATCACACGGCTTGCAAGTGGAATCCTGTCTaGAAGACACCAAATCCCATACTCTTTCCACTGTAT +
Preference number: 6 (lower is better)
Translates to: APYHTACKWNPV*KTPNPILFPLY
Trigger: ATACAGTGGAAAGAGTATGGGATTTGGTGTCTTTCAGACAGGATTCCACTTGCAAGCCGTGTGATATGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649239.1
CDS TCA 72 bp GTCATCTTTCCATTCAGGGTGAGTTTGGTTACAGCTTaGGTAGGTATAGCTCCACCTAAGGGAACCAACCAC +
Preference number: 6 (lower is better)
Translates to: VIFPFRVSLVTA*VGIAPPKGTNH
Trigger: GTGGTTGGTTCCCTTAGGTGGAGCTATACCTACTCAAGCTGTAACCAAACTCACCCTGAATGGAAAGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS CCA 72 bp CAACACCAAGGAGTAAAATCCATACTTCAGAGGAACTaGCACCGTCAAGAAACTCACGGAATACCCGTGTGT +
Preference number: 6 (lower is better)
Translates to: QHQGVKSILQRN*HRQETHGIPVC
Trigger: ACACACGGGTATTCCGTGAGTTTCTTGACGGTGCCAGTTCCTCTGAAGTATGGATTTTACTCCTTGGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CCA 72 bp ATAGAAATCCAGACAAAATTGTCAGCCTGTGAGCTGTaGCTTTGTCATCAACAGGCTCAGCCATTCTGGCGA +
Preference number: 6 (lower is better)
Translates to: IEIQTKLSACEL*LCHQQAQPFWR
Trigger: TCGCCAGAATGGCTGAGCCTGTTGATGACAAAGCCACAGCTCACAGGCTGACAATTTTGTCTGGATTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS CCA 72 bp TTCTCTGATACTTCAATAAAGCTTTGGACTGAGGTCTaGAGGATAAGCGCATGCCAACAGGCCAAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: FSDTSIKLWTEV*RISACQQAKEE
Trigger: CTCTTCTTTGGCCTGTTGGCATGCGCTTATCCTCCAGACCTCAGTCCAAAGCTTTATTGAAGTATCAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657471.1
CDS CAA 72 bp AATTTCCTGCATGTGCTATTGACTGCACTCCCGGCCTaGATAGAAATCCAGACAAAATTGTCAGCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: NFLHVLLTALPA*IEIQTKLSACE
Trigger: CTCACAGGCTGACAATTTTGTCTGGATTTCTATCAAGGCCGGGAGTGCAGTCAATAGCACATGCAGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000669972.1
CDS TCA 72 bp TATGGTGAAGGGTGTTTATCAAAGCCCAGTGACTTGTaGAGACCACCAAATGGTGCCTATGTGATGTCAAAG +
Preference number: 6 (lower is better)
Translates to: YGEGCLSKPSDL*RPPNGAYVMSK
Trigger: CTTTGACATCACATAGGCACCATTTGGTGGTCTTCACAAGTCACTGGGCTTTGATAAACACCCTTCACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000661424.1
CDS CAA 72 bp GCTGAGGACGAAATTGACAATTCTGCCTCAACAAACTaGAATCGAGATGACTCCAGGACTTGGCTAACACAA +
Preference number: 6 (lower is better)
Translates to: AEDEIDNSASTN*NRDDSRTWLTQ
Trigger: TTGTGTTAGCCAAGTCCTGGAGTCATCTCGATTCAAGTTTGTTGAGGCAGAATTGTCAATTTCGTCCTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000653073.1
ENST00000658791.1
CDS CCA 72 bp AAAGCACCTACAACAGTAAGTACAGGCAGTTTCCTTTaGCGCTGTGTAAAAATTCGTGCGCAATTCAAGATG +
Preference number: 6 (lower is better)
Translates to: KAPTTVSTGSFL*RCVKIRAQFKM
Trigger: CATCTTGAATTGCGCACGAATTTTTACACAGCGCCAAAGGAAACTGCCTGTACTTACTGTTGTAGGTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000661424.1
ENST00000665279.1
ENST00000666323.1
ENST00000666387.1
ENST00000669972.1
CDS CCA 72 bp GCCAGGTCCCTTGCCAATATATCCGGATCTTTATCTTaGAGAGTTTATCTAATCAGACAACACCAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: ARSLANISGSLS*RVYLIRQHQGV
Trigger: TACTCCTTGGTGTTGTCTGATTAGATAAACTCTCCAAGATAAAGATCCGGATATATTGGCAAGGGACCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CAA 72 bp GTGATTGGCTCCATCCTGAAGACATCAGTCAATCATTaGCACATGAAAAGCATGCCTTTGGATATTCCAAGG +
Preference number: 6 (lower is better)
Translates to: VIGSILKTSVNH*HMKSMPLDIPR
Trigger: CCTTGGAATATCCAAAGGCATGCTTTTCATGTGCAAATGATTGACTGATGTCTTCAGGATGGAGCCAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS CAA 72 bp AAAAGTTGCTTTGAGATTGCATACCATAAGTCACGCTaGTTCGGTGTCCAGGGATACCACTGTATTTCCAGT +
Preference number: 6 (lower is better)
Translates to: KSCFEIAYHKSR*FGVQGYHCISS
Trigger: ACTGGAAATACAGTGGTATCCCTGGACACCGAACAAGCGTGACTTATGGTATGCAATCTCAAAGCAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS TCA 72 bp TACTTCAATAAAGTTTCATGCCATCCGGTTCTCAACTaGAATGTTCTCATGGAAGCAGAATGGTCTGGAAGC +
Preference number: 6 (lower is better)
Translates to: YFNKVSCHPVLN*NVLMEAEWSGS
Trigger: GCTTCCAGACCATTCTGCTTCCATGAGAACATTTCAGTTGAGAACCGGATGGCATGAAACTTTATTGAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431737.1
ENST00000665279.1
CDS CAA 72 bp ACATCAGTCAATCATTTGCACATGAAAAGCATGCCTTaGGATATTCCAAGGGTTTTAGGTATGCCAGGACAC +
Preference number: 6 (lower is better)
Translates to: TSVNHLHMKSMP*DIPRVLGMPGH
Trigger: GTGTCCTGGCATACCTAAAACCCTTGGAATATCCAAAGGCATGCTTTTCATGTGCAAATGATTGACTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS CAA 90 bp ACATTTCTGGTGATTGGCTCCATCCTGAAGACATCAGTCAATCATTaGCACATGAAAAGCATGCCTTTGGATATTCCAAGGGTTTTAGGT +
Preference number: 6 (lower is better)
Translates to: TFLVIGSILKTSVNH*HMKSMPLDIPRVLG
Trigger: ACCTAAAACCCTTGGAATATCCAAAGGCATGCTTTTCATGTGCAAATGATTGACTGATGTCTTCAGGATGGAGCCAATCACCAGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS TCA 72 bp GGGATTTTTATGGAAGCTTCATTACATAGGCATGACTaGTTACATCACTGGCCATTGTTGATGGACTTAACC +
Preference number: 6 (lower is better)
Translates to: GIFMEASLHRHD*LHHWPLLMDLT
Trigger: GGTTAAGTCCATCAACAATGGCCAGTGATGTAATCAGTCATGCCTATGTAATGAAGCTTCCATAAAAATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000431737.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000665279.1
CDS GCA 72 bp AGCTTTGGCGTTATCCAGATTAAAATTGAAGTTAAATaGTGCAGCGTTTCCAGAAACATGAGGCACTGGTTT +
Preference number: 6 (lower is better)
Translates to: SFGVIQIKIEVK*CSVSRNMRHWF
Trigger: AAACCAGTGCCTCATGTTTCTGGAAACGCTGCAGCATTTAACTTCAATTTTAATCTGGATAACGCCAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659064.1
CDS TCA 72 bp ATAACACATCCATTGGCTCTCAGTTCTAGTCCAAGATaGAAAGCATATCCTTGTGTGATCCAAGTCATAAAG +
Preference number: 6 (lower is better)
Translates to: ITHPLALSSSPR*KAYPCVIQVIK
Trigger: CTTTATGACTTGGATCACACAAGGATATGCTTTTCATCTTGGACTAGAACTGAGAGCCAATGGATGTGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000431737.1
ENST00000649239.1
ENST00000652937.1
ENST00000654492.1
ENST00000657037.1
ENST00000657471.1
ENST00000659064.1
ENST00000659335.1
ENST00000660203.1
ENST00000665279.1
ENST00000669972.1
CDS GCA 72 bp AATCTGAGGAATATGTTTTCTAAAAGCCAGGTCCCTTaGCAATATATCCGGATCTTTATCTTGGAGAGTTTA +
Preference number: 6 (lower is better)
Translates to: NLRNMFSKSQVP*QYIRIFILESL
Trigger: TAAACTCTCCAAGATAAAGATCCGGATATATTGGCAAGGGACCTGGCTTTTAGAAAACATATTCCTCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000659335.1
ENST00000666323.1
CDS CAA 72 bp ATAATAGAAATAGAGTGCACAATAAAGGTAATGCACTaGAATCATCCTGAAACCATCCCCTACCATCATCCA +
Preference number: 6 (lower is better)
Translates to: IIEIECTIKVMH*NHPETIPYHHP
Trigger: TGGATGATGGTAGGGGATGGTTTCAGGATGATTCAAGTGCATTACCTTTATTGTGCACTCTATTTCTATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000658791.1
CDS TCA 72 bp TCAAATAAATCTGGACCTACACATGGAAAACGAAATTaGATTACAATTAGTATGCCCCCTACAGAAATCTGT +
Preference number: 6 (lower is better)
Translates to: SNKSGPTHGKRN*ITISMPPTEIC
Trigger: ACAGATTTCTGTAGGGGGCATACTAATTGTAATTCAATTTCGTTTTCCATGTGTAGGTCCAGATTTATTTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000374432.4
ENST00000649942.1
ENST00000653073.1
ENST00000658791.1
ENST00000667243.1