Pregenerated sensors for LINC00701 (Homo sapiens)

Ensembl gene IDs: ENSG00000234556

Ensembl transcript IDs: ENST00000418295.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GTGTGTGTGTGTGTGTGTGTGAAGTACTACTCCTTCTGGGAAAGGTaGGAAGCCTGGCATGACTGGGTAATTTTATTCAAAGAGGTGGTG	+
Preference number: 5 (lower is better) Translates to: VCVCVCVKYYSFWER*EAWHDWVILFKEVV Trigger: CACCACCTCTTTGAATAAAATTACCCAGTCATGCCAGGCTTCTCACCTTTCCCAGAAGGAGTAGTACTTCACACACACACACACACACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418295.1
CDS TCA 72 bp	TACACGTGCATGTGTGTGTGTGTGTGTGTGTGTGTGTaGAGTACTACTCCTTCTGGGAAAGGTGAGAAGCCT	+
Preference number: 6 (lower is better) Translates to: YTCMCVCVCVCV*STTPSGKGEKP Trigger: AGGCTTCTCACCTTTCCCAGAAGGAGTAGTACTTCACACACACACACACACACACACACACATGCACGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000418295.1
CDS TCA 72 bp	TGTGTGTGTGTGAAGTACTACTCCTTCTGGGAAAGGTaGGAAGCCTGGCATGACTGGGTAATTTTATTCAAA	+
Preference number: 6 (lower is better) Translates to: CVCVKYYSFWER*EAWHDWVILFK Trigger: TTTGAATAAAATTACCCAGTCATGCCAGGCTTCTCACCTTTCCCAGAAGGAGTAGTACTTCACACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000418295.1

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