Pregenerated sensors for LINC00692 (Homo sapiens)
Ensembl gene IDs: ENSG00000230891Ensembl transcript IDs: ENST00000451284.6, ENST00000496997.1, ENST00000655652.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AACTTCTCAAAGTTTAAGAGTGACTCTAGGACACCTTCTTCCATTTaGTATGCCTCTCCTTTTGCCACCTTCAGTCTCCCATCTAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: NFSKFKSDSRTPSSI*YASPFATFSLPSSF Trigger: GAAACTAGATGGGAGACTGAAGGTGGCAAAAGGAGAGGCATAGCAAATGGAAGAAGGTGTCCTAGAGTCACTCTTAAACTTTGAGAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS TCA 90 bp | GGCTTTGAGATCCCATCTGCAATGCCACCTCCAAAATATACTTCTTaGACATATTTTGAGATGGTTATTCAGAGGGCGTGTAGACAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GFEIPSAMPPPKYTS*TYFEMVIQRACRQE Trigger: TTCCTGTCTACACGCCCTCTGAATAACCATCTCAAAATATGTTCAAGAAGTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS GCA 90 bp | GATCTGTTGTGTTCTTTTCACTTTCCATTCTCTTTTGGTGCATGCTaGTGCTACTGTTTGCTGTTAAATGGTTGCTGGTTTCACTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: DLLCSFHFPFSFGAC*CYCLLLNGCWFHFR Trigger: TCTGAAGTGAAACCAGCAACCATTTAACAGCAAACAGTAGCAGCAGCATGCACCAAAAGAGAATGGAAAGTGAAAAGAACACAACAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000451284.6 ENST00000496997.1 ENST00000655652.1 |
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| CDS TCA 90 bp | CATGTAAACATCTGTTTGCCTGTATCATATGTAGAGACTTGGCTTTaGGATCCCATCTGCAATGCCACCTCCAAAATATACTTCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: HVNICLPVSYVETWL*DPICNATSKIYFLN Trigger: GTTCAAGAAGTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGATGTTTACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS GCA 72 bp | AAGTTTAAGAGTGACTCTAGGACACCTTCTTCCATTTaGTATGCCTCTCCTTTTGCCACCTTCAGTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: KFKSDSRTPSSI*YASPFATFSLP Trigger: TGGGAGACTGAAGGTGGCAAAAGGAGAGGCATAGCAAATGGAAGAAGGTGTCCTAGAGTCACTCTTAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS CCA 72 bp | TTTTGGTGCATGCTGCTGCTACTGTTTGCTGTTAAATaGTTGCTGGTTTCACTTCAGATGGGTGCAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: FWCMLLLLFAVK*LLVSLQMGAGL Trigger: CAAACCTGCACCCATCTGAAGTGAAACCAGCAACCATTTAACAGCAAACAGTAGCAGCAGCATGCACCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451284.6 ENST00000496997.1 ENST00000655652.1 |
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| CDS CAA 72 bp | CTAGGACACCTTCTTCCATTTGCTATGCCTCTCCTTTaGCCACCTTCAGTCTCCCATCTAGTTTCCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LGHLLPFAMPLL*PPSVSHLVSLS Trigger: ACTTAAGGAAACTAGATGGGAGACTGAAGGTGGCAAAAGGAGAGGCATAGCAAATGGAAGAAGGTGTCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000451284.6 ENST00000496997.1 ENST00000655652.1 |
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| CDS TCA 72 bp | CCACCTTCAGTCTCCCATCTAGTTTCCTTAAGTGATTaGTACGTTCCCCTTCAAGACGATAATTCCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: PPSVSHLVSLSD*YVPLQDDNSSI Trigger: AATGGAGGAATTATCGTCTTGAAGGGGAACGTATCAATCACTTAAGGAAACTAGATGGGAGACTGAAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451284.6 ENST00000496997.1 ENST00000655652.1 |
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| CDS CAA 72 bp | TTTCCATTCTCTTTTGGTGCATGCTGCTGCTACTGTTaGCTGTTAAATGGTTGCTGGTTTCACTTCAGATGG | + |
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Preference number: 6 (lower is better) Translates to: FPFSFGACCCYC*LLNGCWFHFRW Trigger: CCATCTGAAGTGAAACCAGCAACCATTTAACAGCAAACAGTAGCAGCAGCATGCACCAAAAGAGAATGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000451284.6 ENST00000496997.1 ENST00000655652.1 |
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| CDS CAA 72 bp | TGTAAACATCTGTTTGCCTGTATCATATGTAGAGACTaGGCTTTGAGATCCCATCTGCAATGCCACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: CKHLFACIICRD*ALRSHLQCHLQ Trigger: TTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGATGTTTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS TCA 72 bp | ATCTGTTTGCCTGTATCATATGTAGAGACTTGGCTTTaGGATCCCATCTGCAATGCCACCTCCAAAATATAC | + |
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Preference number: 6 (lower is better) Translates to: ICLPVSYVETWL*DPICNATSKIY Trigger: GTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS CCA 72 bp | CAATATGACTTTTCTGAAAGAGTTCTGTGGCTTAACTaGTCTCAGCTTGGCATCTCTCTTGTAGTTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QYDFSERVLWLN*SQLGISLVVEV Trigger: GACTTCAACTACAAGAGAGATGCCAAGCTGAGACCAGTTAAGCCACAGAACTCTTTCAGAAAAGTCATATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451284.6 |
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| CDS CAA 72 bp | CATCTGTTTGCCTGTATCATATGTAGAGACTTGGCTTaGAGATCCCATCTGCAATGCCACCTCCAAAATATA | + |
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Preference number: 6 (lower is better) Translates to: HLFACIICRDLA*RSHLQCHLQNI Trigger: TATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS CAA 90 bp | AGCAAGTCATGTAAACATCTGTTTGCCTGTATCATATGTAGAGACTaGGCTTTGAGATCCCATCTGCAATGCCACCTCCAAAATATACTT | + |
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Preference number: 6 (lower is better) Translates to: SKSCKHLFACIICRD*ALRSHLQCHLQNIL Trigger: AAGTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGATGTTTACATGACTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS CAA 90 bp | TCATGTAAACATCTGTTTGCCTGTATCATATGTAGAGACTTGGCTTaGAGATCCCATCTGCAATGCCACCTCCAAAATATACTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: SCKHLFACIICRDLA*RSHLQCHLQNILLE Trigger: TTCAAGAAGTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATATGATACAGGCAAACAGATGTTTACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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| CDS GCA 72 bp | ATATGTAGAGACTTGGCTTTGAGATCCCATCTGCAATaGCACCTCCAAAATATACTTCTTGAACATATTTTG | + |
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Preference number: 6 (lower is better) Translates to: ICRDLALRSHLQ*HLQNILLEHIL Trigger: CAAAATATGTTCAAGAAGTATATTTTGGAGGTGGCATTGCAGATGGGATCTCAAAGCCAAGTCTCTACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451284.6 ENST00000655652.1 |
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