Pregenerated sensors for LINC00656 (Homo sapiens)
Ensembl gene IDs: ENSG00000233746Ensembl transcript IDs: ENST00000443744.2, ENST00000652955.1, ENST00000670261.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTGAGGCCGCTGCCGAGCTGTCTATTCAGAGTCAGCTCCTCTGGTaGTGGAAGATGCTGGCACTCAGTGCTCCATCGCCTCTCAGTGAG | + |
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Preference number: 5 (lower is better) Translates to: AEAAAELSIQSQLLW*WKMLALSAPSPLSE Trigger: CTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACAGCTCGGCAGCGGCCTCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443744.2 ENST00000652955.1 |
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| CDS CCA 90 bp | TGCCAAGGGCTCAGTGGCTGCCTGTGGCTGGTGGCTCCTGGAAGTTaGAGTGACTCACTTGAGGCACCAGAAATGCTCGCTGCAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: CQGLSGCLWLVAPGS*SDSLEAPEMLAAVQ Trigger: CTGCACTGCAGCGAGCATTTCTGGTGCCTCAAGTGAGTCACTCCAACTTCCAGGAGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS GCA 90 bp | CAAGCACCCAAGGCCAGTTCTATGACTGTCCTGGTGAGTGCCAGATaGAGGGAAAGTGGCCCCCTGTGTGGGGCAGGTGGCTTCTGCATT | + |
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Preference number: 5 (lower is better) Translates to: QAPKASSMTVLVSAR*RESGPLCGAGGFCI Trigger: AATGCAGAAGCCACCTGCCCCACACAGGGGGCCACTTTCCCTGCATCTGGCACTCACCAGGACAGTCATAGAACTGGCCTTGGGTGCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 90 bp | GCCTCACATCCCCACCAAAAGGGACACCATTGTGATAGCCTGGGCTaGAGAGATGCACGCCCTGCAGGGACAGCTGTAGGTCTTGGCACA | + |
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Preference number: 5 (lower is better) Translates to: ASHPHQKGHHCDSLG*RDARPAGTAVGLGT Trigger: TGTGCCAAGACCTACAGCTGTCCCTGCAGGGCGTGCATCTCTGCAGCCCAGGCTATCACAATGGTGTCCCTTTTGGTGGGGATGTGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 90 bp | ACACTGGACGCTCAGGTCTTCTGTTGCATGGGTTACCGGGTTACATaGCAAGGGCTCAGTGGCTGCCTGTGGCTGGTGGCTCCTGGAAGT | + |
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Preference number: 5 (lower is better) Translates to: TLDAQVFCCMGYRVT*QGLSGCLWLVAPGS Trigger: ACTTCCAGGAGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCATGTAACCCGGTAACCCATGCAACAGAAGACCTGAGCGTCCAGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS CCA 90 bp | TGTGCTGAGGCCGCTGCCGAGCTGTCTATTCAGAGTCAGCTCCTCTaGTGCTGGAAGATGCTGGCACTCAGTGCTCCATCGCCTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: CAEAAAELSIQSQLL*CWKMLALSAPSPLS Trigger: ACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACAGCTCGGCAGCGGCCTCAGCACA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443744.2 ENST00000652955.1 |
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| CDS TCA 90 bp | GCAGTGCAGATGTTAGGACCTGGGTTCAGAAAGCAGATCCCTAAATaGGCCTCTGGGGTCCACGGCTTCTGGTCCACGTGCCCACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: AVQMLGPGFRKQIPK*ASGVHGFWSTCPRL Trigger: AAGCCGTGGGCACGTGGACCAGAAGCCGTGGACCCCAGAGGCTCATTTAGGGATCTGCTTTCTGAACCCAGGTCCTAACATCTGCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 90 bp | GAGGTTTGCAGACATCCCAAGTTAAGGCACTCTGGCAGGTGTGCCTaGCGGGTCTTGGGAGCTGGGCCTCCAGAGGTTTGTGCTGACAAA | + |
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Preference number: 5 (lower is better) Translates to: EVCRHPKLRHSGRCA*RVLGAGPPEVCADK Trigger: TTTGTCAGCACAAACCTCTGGAGGCCCAGCTCCCAAGACCCGCCAGGCACACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAAACCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 90 bp | CTGCCGAGCTGTCTATTCAGAGTCAGCTCCTCTGGTGCTGGAAGATaGTGGCACTCAGTGCTCCATCGCCTCTCAGTGAGCTGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: LPSCLFRVSSSGAGR*WHSVLHRLSVSWKL Trigger: CAACTTCCAGCTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACAGCTCGGCAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443744.2 |
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| CDS GCA 90 bp | TTCTGTTGCATGGGTTACCGGGTTACATGCCAAGGGCTCAGTGGCTaGCTGTGGCTGGTGGCTCCTGGAAGTTGGAGTGACTCACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: FCCMGYRVTCQGLSG*LWLVAPGSWSDSLE Trigger: CTCAAGTGAGTCACTCCAACTTCCAGGAGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCATGTAACCCGGTAACCCATGCAACAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS CCA 90 bp | CCGAGCTGTCTATTCAGAGTCAGCTCCTCTGGTGCTGGAAGATGCTaGCACTCAGTGCTCCATCGCCTCTCAGTGAGCTGGAAGTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PSCLFRVSSSGAGRC*HSVLHRLSVSWKLE Trigger: CTCCAACTTCCAGCTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACAGCTCGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443744.2 |
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| CDS CCA 90 bp | GATGGCTGGAAGCCAGATTGTGCTTACTTGCACCAGGTGCTGAGCTaGGCACTGTATGCATCGGAGGAGGGGCATGGTGGCATGCTAATA | + |
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Preference number: 5 (lower is better) Translates to: DGWKPDCAYLHQVLS*ALYASEEGHGGMLI Trigger: TATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGGTGCAAGTAAGCACAATCTGGCTTCCAGCCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 90 bp | CCAGGTGCTGAGCTGGGCACTGTATGCATCGGAGGAGGGGCATGGTaGCATGCTAATAGACCTTTATTTACAGTAACAGGCAGTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: PGAELGTVCIGGGAW*HANRPLFTVTGSGV Trigger: CACCCCACTGCCTGTTACTGTAAATAAAGGTCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 90 bp | GCACCAGGTGCTGAGCTGGGCACTGTATGCATCGGAGGAGGGGCATaGTGGCATGCTAATAGACCTTTATTTACAGTAACAGGCAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: APGAELGTVCIGGGA*WHANRPLFTVTGSG Trigger: CCCACTGCCTGTTACTGTAAATAAAGGTCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS TCA 90 bp | CCAGGAAAGGCTCGTGTTCTGCAGTGGTTACCTTACAATTCAGAATaGACTTTGAACAAATCCCTGAAGACAACGAGGCTGGCCGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PGKARVLQWLPYNSE*TLNKSLKTTRLAVD Trigger: ATCCACGGCCAGCCTCGTTGTCTTCAGGGATTTGTTCAAAGTTCATTCTGAATTGTAAGGTAACCACTGCAGAACACGAGCCTTTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS TCA 72 bp | GGTCCACGGCTTCTGGTCCACGTGCCCACGGCTTGGTaGGGTCTGGGAGGTCTCCCTGAGGGAGGCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: GPRLLVHVPTAW*GLGGLPEGGRT Trigger: AGTCCTGCCTCCCTCAGGGAGACCTCCCAGACCTCACCAAGCCGTGGGCACGTGGACCAGAAGCCGTGGACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | AAGGCCAGTTCTATGACTGTCCTGGTGAGTGCCAGATaGAGGGAAAGTGGCCCCCTGTGTGGGGCAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: KASSMTVLVSAR*RESGPLCGAGG Trigger: GCCACCTGCCCCACACAGGGGGCCACTTTCCCTGCATCTGGCACTCACCAGGACAGTCATAGAACTGGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | TTGCAGACATCCCAAGTTAAGGCACTCTGGCAGGTGTaGCTGGCGGGTCTTGGGAGCTGGGCCTCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: LQTSQVKALWQV*LAGLGSWASRG Trigger: ACCTCTGGAGGCCCAGCTCCCAAGACCCGCCAGGCACACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | GACAGAGGTTTGCAGACATCCCAAGTTAAGGCACTCTaGCAGGTGTGCCTGGCGGGTCTTGGGAGCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DRGLQTSQVKAL*QVCLAGLGSWA Trigger: GGCCCAGCTCCCAAGACCCGCCAGGCACACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAAACCTCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | GCTCAGGTCTTCTGTTGCATGGGTTACCGGGTTACATaGCAAGGGCTCAGTGGCTGCCTGTGGCTGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AQVFCCMGYRVT*QGLSGCLWLVA Trigger: AGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCATGTAACCCGGTAACCCATGCAACAGAAGACCTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | ATGGGTTACCGGGTTACATGCCAAGGGCTCAGTGGCTaGCTGTGGCTGGTGGCTCCTGGAAGTTGGAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: MGYRVTCQGLSG*LWLVAPGSWSD Trigger: GTCACTCCAACTTCCAGGAGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCATGTAACCCGGTAACCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS CCA 72 bp | CACATCCCCACCAAAAGGGACACCATTGTGATAGCCTaGGCTGCAGAGATGCACGCCCTGCAGGGACAGCTG | + |
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Preference number: 6 (lower is better) Translates to: HIPTKRDTIVIA*AAEMHALQGQL Trigger: CAGCTGTCCCTGCAGGGCGTGCATCTCTGCAGCCCAGGCTATCACAATGGTGTCCCTTTTGGTGGGGATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | CAGTCCAAAGAGCACGCTGCCCTTCCTTCCGCACACTaGAGCACGCAGCCCTGGACCCACATTTCTCAACAG | + |
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Preference number: 6 (lower is better) Translates to: QSKEHAALPSAH*STQPWTHISQQ Trigger: CTGTTGAGAAATGTGGGTCCAGGGCTGCGTGCTCCAGTGTGCGGAAGGAAGGGCAGCGTGCTCTTTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS TCA 72 bp | CTTGTGGGGATGGATGTGATGGGGTGTGGCACACAGTaGTCAGGCCAGGTAACGGTGACTGAGACGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LVGMDVMGCGTQ*SGQVTVTETQG Trigger: TCCCTGCGTCTCAGTCACCGTTACCTGGCCTGATCACTGTGTGCCACACCCCATCACATCCATCCCCACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS TCA 72 bp | GCTGGAAGCCAGATTGTGCTTACTTGCACCAGGTGCTaGGCTGGGCACTGTATGCATCGGAGGAGGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: AGSQIVLTCTRC*AGHCMHRRRGM Trigger: CATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGGTGCAAGTAAGCACAATCTGGCTTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | GCTGCCGAGCTGTCTATTCAGAGTCAGCTCCTCTGGTaGTGGAAGATGCTGGCACTCAGTGCTCCATCGCCT | + |
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Preference number: 6 (lower is better) Translates to: AAELSIQSQLLW*WKMLALSAPSP Trigger: AGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACAGCTCGGCAGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000443744.2 ENST00000652955.1 |
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| CDS GCA 72 bp | CAGGCAGTGGGGTGGGTTCGGCCATGGACAGAGGTTTaGAGACATCCCAAGTTAAGGCACTCTGGCAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QAVGWVRPWTEV*RHPKLRHSGRC Trigger: ACACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAAACCTCTGTCCATGGCCGAACCCACCCCACTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | GGGACAGCTGTAGGTCTTGGCACAGATACAGTGGCCTaGGCTAATCTTGAGCTGGGCCTTTGCCTCCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: GTAVGLGTDTVA*ANLELGLCLLG Trigger: ACCCAGGAGGCAAAGGCCCAGCTCAAGATTAGCCCAGGCCACTGTATCTGTGCCAAGACCTACAGCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | AAGCCAGATTGTGCTTACTTGCACCAGGTGCTGAGCTaGGCACTGTATGCATCGGAGGAGGGGCATGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: KPDCAYLHQVLS*ALYASEEGHGG Trigger: GCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGGTGCAAGTAAGCACAATCTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | TACCGGGTTACATGCCAAGGGCTCAGTGGCTGCCTGTaGCTGGTGGCTCCTGGAAGTTGGAGTGACTCACTT | + |
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Preference number: 6 (lower is better) Translates to: YRVTCQGLSGCL*LVAPGSWSDSL Trigger: AAGTGAGTCACTCCAACTTCCAGGAGCCACCAGCCACAGGCAGCCACTGAGCCCTTGGCATGTAACCCGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS CAA 72 bp | ACAGGCAGTGGGGTGGGTTCGGCCATGGACAGAGGTTaGCAGACATCCCAAGTTAAGGCACTCTGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: TGSGVGSAMDRG*QTSQVKALWQV Trigger: CACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAAACCTCTGTCCATGGCCGAACCCACCCCACTGCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CAA 90 bp | AGACATCCCAAGTTAAGGCACTCTGGCAGGTGTGCCTGGCGGGTCTaGGGAGCTGGGCCTCCAGAGGTTTGTGCTGACAAAAAGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: RHPKLRHSGRCAWRV*GAGPPEVCADKKAN Trigger: ATTGGCCTTTTTGTCAGCACAAACCTCTGGAGGCCCAGCTCCCAAGACCCGCCAGGCACACCTGCCAGAGTGCCTTAACTTGGGATGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CAA 90 bp | TTTACAGTAACAGGCAGTGGGGTGGGTTCGGCCATGGACAGAGGTTaGCAGACATCCCAAGTTAAGGCACTCTGGCAGGTGTGCCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: FTVTGSGVGSAMDRG*QTSQVKALWQVCLA Trigger: CGCCAGGCACACCTGCCAGAGTGCCTTAACTTGGGATGTCTGCAAACCTCTGTCCATGGCCGAACCCACCCCACTGCCTGTTACTGTAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | CTATTCAGAGTCAGCTCCTCTGGTGCTGGAAGATGCTaGCACTCAGTGCTCCATCGCCTCTCAGTGAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LFRVSSSGAGRC*HSVLHRLSVSW Trigger: CCAGCTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443744.2 |
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| CDS TCA 72 bp | ATGTTAGGACCTGGGTTCAGAAAGCAGATCCCTAAATaGGCCTCTGGGGTCCACGGCTTCTGGTCCACGTGC | + |
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Preference number: 6 (lower is better) Translates to: MLGPGFRKQIPK*ASGVHGFWSTC Trigger: GCACGTGGACCAGAAGCCGTGGACCCCAGAGGCTCATTTAGGGATCTGCTTTCTGAACCCAGGTCCTAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS GCA 72 bp | TGTCTATTCAGAGTCAGCTCCTCTGGTGCTGGAAGATaGTGGCACTCAGTGCTCCATCGCCTCTCAGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLFRVSSSGAGR*WHSVLHRLSVS Trigger: GCTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443744.2 |
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| CDS GCA 72 bp | TGCTTACTTGCACCAGGTGCTGAGCTGGGCACTGTATaGATCGGAGGAGGGGCATGGTGGCATGCTAATAGA | + |
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Preference number: 6 (lower is better) Translates to: CLLAPGAELGTV*IGGGAWWHANR Trigger: TCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGCACCTGGTGCAAGTAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CAA 72 bp | TGTGGCTGGTGGCTCCTGGAAGTTGGAGTGACTCACTaGAGGCACCAGAAATGCTCGCTGCAGTGCAGATGT | + |
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Preference number: 6 (lower is better) Translates to: CGWWLLEVGVTH*RHQKCSLQCRC Trigger: ACATCTGCACTGCAGCGAGCATTTCTGGTGCCTCAAGTGAGTCACTCCAACTTCCAGGAGCCACCAGCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670261.1 |
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| CDS GCA 72 bp | TGTCTATTCAGAGTCAGCTCCTCTGGTGCTGGAAGATaGTGGCACTCAGTGCTCCATCGCCTCTCAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: CLFRVSSSGAGR*WHSVLHRLSVS Trigger: ACTCACTGAGAGGCGATGGAGCACTGAGTGCCAGCATCTTCCAGCACCAGAGGAGCTGACTCTGAATAGACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652955.1 |
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| CDS CCA 72 bp | TTGGCACAGATACAGTGGCCTGGGCTAATCTTGAGCTaGGCCTTTGCCTCCTGGGTTACTGATGAGAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LAQIQWPGLILS*AFASWVTDEKL Trigger: GAGCTTCTCATCAGTAACCCAGGAGGCAAAGGCCCAGCTCAAGATTAGCCCAGGCCACTGTATCTGTGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | GGTGACTCAGTGGAGCAACTGTCAAAGGTGCTAAGCTaGGATTTCTCAAGGCCCATCTTCCCCAGAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GDSVEQLSKVLS*DFSRPIFPRAP Trigger: AGGAGCTCTGGGGAAGATGGGCCTTGAGAAATCCCAGCTTAGCACCTTTGACAGTTGCTCCACTGAGTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | GAGCTGGGCACTGTATGCATCGGAGGAGGGGCATGGTaGCATGCTAATAGACCTTTATTTACAGTAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: ELGTVCIGGGAW*HANRPLFTVTG Trigger: GCCTGTTACTGTAAATAAAGGTCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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| CDS CCA 72 bp | GCTGAGCTGGGCACTGTATGCATCGGAGGAGGGGCATaGTGGCATGCTAATAGACCTTTATTTACAGTAACA | + |
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Preference number: 6 (lower is better) Translates to: AELGTVCIGGGA*WHANRPLFTVT Trigger: TGTTACTGTAAATAAAGGTCTATTAGCATGCCACCATGCCCCTCCTCCGATGCATACAGTGCCCAGCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000443744.2 ENST00000652955.1 ENST00000670261.1 |
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