Pregenerated sensors for LINC00652 (Homo sapiens)
Ensembl gene IDs: ENSG00000179935Ensembl transcript IDs: ENST00000412553.6, ENST00000454749.1, ENST00000455340.6, ENST00000654746.1, ENST00000662199.1, ENST00000664962.1, ENST00000669396.1, ENST00000670001.1
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTTCCACACTGGCCTAGCAGGGGTTCCCATGGGTGCCCCACTCTaGAGCAGACTCCTGACTGGACATCCAGGCATTTCCATACCTCCT | + |
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Preference number: 5 (lower is better) Translates to: PFHTGLAGVPMGAPL*SRLLTGHPGISIPP Trigger: AGGAGGTATGGAAATGCCTGGATGTCCAGTCAGGAGTCTGCTGCAGAGTGGGGCACCCATGGGAACCCCTGCTAGGCCAGTGTGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | TCTGTGCACTCCCAGGTTCAACACCATGTGGAAGCTGCCAAGGCTTaGGGCTTGCACCCTCTGAAGCCATGGCTGGAGCGGCTGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SVHSQVQHHVEAAKA*GLHPLKPWLERLRG Trigger: ACCTCTCAGCCGCTCCAGCCATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGAGTGCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS TCA 90 bp | CCACAGGGTACAGCCTCCCTCGTGGTTGCTTTCATGGGCTGGCGTTaGGTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PQGTASLVVAFMGWR*VSAAFPGARCKLLV Trigger: CACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGCCCATGAAAGCAACCACGAGGGAGGCTGTACCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | TCTTCCCATAAGGACAGACTTGGGATGCTCCATGGGAGAGGAGCCTaGGTCTGCAGAGCAGGTCCACTGGCCTTCAAAAGGTCATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSHKDRLGMLHGRGA*VCRAGPLAFKRSSA Trigger: TGCTGATGACCTTTTGAAGGCCAGTGGACCTGCTCTGCAGACCCAGGCTCCTCTCCCATGGAGCATCCCAAGTCTGTCCTTATGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 |
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| CDS CCA 90 bp | TACGGGTTAGTGGGAGTGATTGAAAGGCTTGGAGAGTTGTCCTTCTaGGTTTGCTCTGGTTGGGCGATCAGAGTCCATAGCACTGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: YGLVGVIERLGELSF*VCSGWAIRVHSTGW Trigger: CCACCCAGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCACTAACCCGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000670001.1 |
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| CDS CCA 90 bp | GGCGTTGAGTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTaGTGGATCTACCATTCTGGAATCTGGAGGATGGTGGCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GVECLQLFQVHGASC*WIYHSGIWRMVAFF Trigger: GAAGAAGGCCACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | GTGATTGAAAGGCTTGGAGAGTTGTCCTTCTGGGTTTGCTCTGGTTaGGCGATCAGAGTCCATAGCACTTGTGGGCGTGGATCCCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: VIERLGELSFWVCSG*AIRVHSTCGRGSPL Trigger: TAGAGGGGATCCACGCCCACAAGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000664962.1 |
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| CDS GCA 90 bp | GGTTGCTTTCATGGGCTGGCGTTGAGTGTCTGCAGCTTTTCCAGGTaGACGGTGCAAGTTGTTGGTGGATCTACCATTCTGGAATCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GCFHGLALSVCSFSR*TVQVVGGSTILESG Trigger: TCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGCCCATGAAAGCAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | TACGGGTTAGTGGGAGTGATTGAAAGGCTTGGAGAGTTGTCCTTCTaGGTTTGCTCTGGTTGGGCGATCAGAGTCCATAGCACTTGTGGG | + |
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Preference number: 5 (lower is better) Translates to: YGLVGVIERLGELSF*VCSGWAIRVHSTCG Trigger: CCCACAAGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCACTAACCCGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000664962.1 |
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| CDS TCA 90 bp | AGGCCTCACAATAGTGTGTCCACAATACGGGTTAGTGGGAGTGATTaGAAGGCTTGGAGAGTTGTCCTTCTGGGTTTGCTCTGGTTGGGC | + |
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Preference number: 5 (lower is better) Translates to: RPHNSVSTIRVSGSD*KAWRVVLLGLLWLG Trigger: GCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCACTAACCCGTATTGTGGACACACTATTGTGAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412553.6 ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS TCA 90 bp | ATACCTCCTCTGAAACCTAGGTGGAGGTTCCCAAACCTCAATCCTTaGCTTCTGTGCACTCCCAGGTTCAACACCATGTGGAAGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: IPPLKPRWRFPNLNP*LLCTPRFNTMWKLP Trigger: TGGCAGCTTCCACATGGTGTTGAACCTGGGAGTGCACAGAAGTCAAGGATTGAGGTTTGGGAACCTCCACCTAGGTTTCAGAGGAGGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | GTTGAGTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTGGTaGATCTACCATTCTGGAATCTGGAGGATGGTGGCCTTCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VECLQLFQVHGASCW*IYHSGIWRMVAFFS Trigger: TGAGAAGAAGGCCACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | TTGGACTTACAGTTCCACATGGCTGGAGAGGGTTCACAATCATGGTaGAAGGCAGGAGGAGCAAGTCACATCTTACGTGAATGGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LDLQFHMAGEGSQSW*KAGGASHILREWWQ Trigger: CTGCCACCATTCACGTAAGATGTGACTTGCTCCTCCTGCCTTCCACCATGATTGTGAACCCTCTCCAGCCATGTGGAACTGTAAGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000412553.6 |
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| CDS CCA 90 bp | GTGATTGAAAGGCTTGGAGAGTTGTCCTTCTGGGTTTGCTCTGGTTaGGCGATCAGAGTCCATAGCACAGACAGAGGATGTGCAGCGTTT | + |
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Preference number: 5 (lower is better) Translates to: VIERLGELSFWVCSG*AIRVHSTDRGCAAF Trigger: AAACGCTGCACATCCTCTGTCTGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669396.1 |
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| CDS CCA 90 bp | TACGGGTTAGTGGGAGTGATTGAAAGGCTTGGAGAGTTGTCCTTCTaGGTTTGCTCTGGTTGGGCGATCAGAGTCCATAGCACAGACAGA | + |
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Preference number: 5 (lower is better) Translates to: YGLVGVIERLGELSF*VCSGWAIRVHSTDR Trigger: TCTGTCTGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCACTAACCCGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669396.1 |
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| CDS CCA 90 bp | GTGATTGAAAGGCTTGGAGAGTTGTCCTTCTGGGTTTGCTCTGGTTaGGCGATCAGAGTCCATAGCACTGGGTGGGAAAACATGAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: VIERLGELSFWVCSG*AIRVHSTGWENMKE Trigger: TTCTTTCATGTTTTCCCACCCAGTGCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000670001.1 |
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| CDS CCA 90 bp | TGCAGAGCAGGTCCACTGGCACCCACAAGAATTGTTTTTACTTCGTaGTGGAAGATGTGGAGAGCCCATCCAAGAAGACAGCAATTTCAG | + |
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Preference number: 5 (lower is better) Translates to: CRAGPLAPTRIVFTS*WKMWRAHPRRQQFQ Trigger: CTGAAATTGCTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCCAGTGGACCTGCTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS TCA 90 bp | AGAAAGCATTTTTCAAGCTGCTGTTTGGCTTGTTTGCTCTATCGCTaGCAGCATTGGTCCAGAGAAAGCAGCTTGGGGTACAGCCAGACA | + |
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Preference number: 5 (lower is better) Translates to: RKHFSSCCLACLLYR*QHWSRESSLGYSQT Trigger: TGTCTGGCTGTACCCCAAGCTGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAATGCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 90 bp | CCACTGGCACCCACAAGAATTGTTTTTACTTCGTGGTGGAAGATGTaGAGAGCCCATCCAAGAAGACAGCAATTTCAGGAAGAGGATTCC | + |
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Preference number: 5 (lower is better) Translates to: PLAPTRIVFTSWWKM*RAHPRRQQFQEEDS Trigger: GGAATCCTCTTCCTGAAATTGCTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCCAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS CCA 90 bp | AGAGCAGGTCCACTGGCACCCACAAGAATTGTTTTTACTTCGTGGTaGAAGATGTGGAGAGCCCATCCAAGAAGACAGCAATTTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RAGPLAPTRIVFTSW*KMWRAHPRRQQFQE Trigger: TTCCTGAAATTGCTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCCAGTGGACCTGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS TCA 90 bp | GTCTCTAGGAAGTTCCAAACTTTCCCACATTTTTCTGTCTTCTTCTaGGCCCTCCAAACTGTTCCATCCTCTGCCTGTTACCCAGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VSRKFQTFPHFSVFF*ALQTVPSSACYPVP Trigger: TGGAACTGGGTAACAGGCAGAGGATGGAACAGTTTGGAGGGCTCAGAAGAAGACAGAAAAATGTGGGAAAGTTTGGAACTTCCTAGAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 90 bp | TATGTCCAAGTAGAAAGCATTTTTCAAGCTGCTGTTTGGCTTGTTTaGTCTATCGCTGACAGCATTGGTCCAGAGAAAGCAGCTTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: YVQVESIFQAAVWLV*SIADSIGPEKAAWG Trigger: ACCCCAAGCTGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAATGCTTTCTACTTGGACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS GCA 90 bp | CTCCCACCTGGTCCCTCCCACAACATGTGGGAATTATGGGAGCTATaGAGTCTATGCATGTCTATGCATGCTAACAAAATTACTCTTGTA | + |
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Preference number: 5 (lower is better) Translates to: LPPGPSHNMWELWEL*SLCMSMHANKITLV Trigger: TACAAGAGTAATTTTGTTAGCATGCATAGACATGCATAGACTGCATAGCTCCCATAATTCCCACATGTTGTGGGAGGGACCAGGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 90 bp | GCAAGAGGGTATGTCCAAGTAGAAAGCATTTTTCAAGCTGCTGTTTaGCTTGTTTGCTCTATCGCTGACAGCATTGGTCCAGAGAAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ARGYVQVESIFQAAV*LVCSIADSIGPEKA Trigger: TGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAATGCTTTCTACTTGGACATACCCTCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS TCA 90 bp | AGAGTCATCTTTTCTCCATTTCCCAACAAGTTCCTCATCTCCCTCTaGGACCACCTCAGCCTGGTCCTTATTGTTCATTCACCTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: RVIFSPFPNKFLISL*DHLSLVLIVHSPYC Trigger: ACAATAAGGTGAATGAACAATAAGGACCAGGCTGAGGTGGTCTCAGAGGGAGATGAGGAACTTGTTGGGAAATGGAGAAAAGATGACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 90 bp | GGTCCCTCCCACAACATGTGGGAATTATGGGAGCTATGCAGTCTATaGATGTCTATGCATGCTAACAAAATTACTCTTGTACCCCATAAA | + |
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Preference number: 5 (lower is better) Translates to: GPSHNMWELWELCSL*MSMHANKITLVPHK Trigger: TTTATGGGGTACAAGAGTAATTTTGTTAGCATGCATAGACATGCATAGACTGCATAGCTCCCATAATTCCCACATGTTGTGGGAGGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 90 bp | AGACATATCCAAGACTGGGCAATTTACAAAAGAAAGAGATTTAATTaGATTTACAGTTCCACATGGCTGGGGAGGCCTCACAATCATGGC | + |
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Preference number: 5 (lower is better) Translates to: RHIQDWAIYKRKRFN*IYSSTWLGRPHNHG Trigger: GCCATGATTGTGAGGCCTCCCCAGCCATGTGGAACTGTAAATCCAATTAAATCTCTTTCTTTTGTAAATTGCCCAGTCTTGGATATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 90 bp | ACATTTTTCTGTCTTCTTCTGAGCCCTCCAAACTGTTCCATCCTCTaGCTGTTACCCAGTTCCAAAGTTACTTCCACATTTTTGATGATA | + |
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Preference number: 5 (lower is better) Translates to: TFFCLLLSPPNCSIL*LLPSSKVTSTFLMI Trigger: TATCATCAAAAATGTGGAAGTAACTTTGGAACTGGGTAACAGGCAGAGGATGGAACAGTTTGGAGGGCTCAGAAGAAGACAGAAAAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 90 bp | TCTATGTCATTCTTAATGCTTCCGTCTCTCTGGTTGAATCTAGATTaGATACAATCAGTGATGCACATTTACCAGACAGAGGATGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: SMSFLMLPSLWLNLD*IQSVMHIYQTEDVQ Trigger: CTGCACATCCTCTGTCTGGTAAATGTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAATGACATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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| CDS GCA 72 bp | TCCCTTCCACACTGGCCTAGCAGGGGTTCCCATGGGTaGCCCACTCTGCAGCAGACTCCTGACTGGACATCC | + |
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Preference number: 6 (lower is better) Translates to: SLPHWPSRGSHG*PTLQQTPDWTS Trigger: GGATGTCCAGTCAGGAGTCTGCTGCAGAGTGGGGCACCCATGGGAACCCCTGCTAGGCCAGTGTGGAAGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | CACTCCCAGGTTCAACACCATGTGGAAGCTGCCAAGGCTTGGGGCTaGCACCCTCTGAAGCCATGGCTGGAGCGGCTGAGAGGTAGGGCA | + |
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Preference number: 6 (lower is better) Translates to: HSQVQHHVEAAKAWG*HPLKPWLERLRGRA Trigger: TGCCCTACCTCTCAGCCGCTCCAGCCATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 72 bp | ACTGGCCTAGCAGGGGTTCCCATGGGTGCCCCACTCTaGAGCAGACTCCTGACTGGACATCCAGGCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: TGLAGVPMGAPL*SRLLTGHPGIS Trigger: GGAAATGCCTGGATGTCCAGTCAGGAGTCTGCTGCAGAGTGGGGCACCCATGGGAACCCCTGCTAGGCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | TCCCAGGTTCAACACCATGTGGAAGCTGCCAAGGCTTaGGGCTTGCACCCTCTGAAGCCATGGCTGGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SQVQHHVEAAKA*GLHPLKPWLER Trigger: CCGCTCCAGCCATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 72 bp | CTCCCAGGTTCAACACCATGTGGAAGCTGCCAAGGCTaGGGGCTTGCACCCTCTGAAGCCATGGCTGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: LPGSTPCGSCQG*GLAPSEAMAGA Trigger: CGCTCCAGCCATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | TTCTGTGCACTCCCAGGTTCAACACCATGTGGAAGCTGCCAAGGCTaGGGGCTTGCACCCTCTGAAGCCATGGCTGGAGCGGCTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: FCALPGSTPCGSCQG*GLAPSEAMAGAAER Trigger: CCTCTCAGCCGCTCCAGCCATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGAGTGCACAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS TCA 72 bp | ACAGCCTCCCTCGTGGTTGCTTTCATGGGCTGGCGTTaGGTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TASLVVAFMGWR*VSAAFPGARCK Trigger: CTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGCCCATGAAAGCAACCACGAGGGAGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | ACCACAGGGTACAGCCTCCCTCGTGGTTGCTTTCATGGGCTGGCGTaGAGTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: TTGYSLPRGCFHGLA*SVCSFSRCTVQVVG Trigger: ACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGCCCATGAAAGCAACCACGAGGGAGGCTGTACCCTGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 72 bp | TTCTGTGCACTCCCAGGTTCAACACCATGTGGAAGCTaGCAAGGCTTGGGGCTTGCACCCTCTGAAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: FCALPGSTPCGS*QGLGLAPSEAM Trigger: CATGGCTTCAGAGGGTGCAAGCCCCAAGCCTTGGCAGCTTCCACATGGTGTTGAACCTGGGAGTGCACAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | TCTATCGCTGACAGCATTGGTCCAGAGAAAGCAGCTTaGGGTACAGCCAGACAGGGCTCCTGCTTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SIADSIGPEKAA*GTARQGSCFFP Trigger: TGGGAAGAAGCAGGAGCCCTGTCTGGCTGTACCCCAAGCTGCTTTCTCTGGACCAATGCTGTCAGCGATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412553.6 ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CAA 90 bp | CTTCTTCACATGATGGTGGAAGGGTTCCCTCTATCGCTGACAGCATaGGTCCAGAGAAAGCAGCTTGGGGTACAGCCAGACAGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLHMMVEGFPLSLTA*VQRKQLGVQPDRAP Trigger: AGGAGCCCTGTCTGGCTGTACCCCAAGCTGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGGGAACCCTTCCACCATCATGTGAAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 72 bp | CATGGGCTGGCGTTGAGTGTCTGCAGCTTTTCCAGGTaGACGGTGCAAGTTGTTGGTGGATCTACCATTCTG | + |
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Preference number: 6 (lower is better) Translates to: HGLALSVCSFSR*TVQVVGGSTIL Trigger: CAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACACTCAACGCCAGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | CTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTGGTaGATCTACCATTCTGGAATCTGGAGGATGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQLFQVHGASCW*IYHSGIWRMVA Trigger: GGCCACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | GTGGGAGTGATTGAAAGGCTTGGAGAGTTGTCCTTCTaGGTTTGCTCTGGTTGGGCGATCAGAGTCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: VGVIERLGELSF*VCSGWAIRVHS Trigger: GCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412553.6 ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CAA 90 bp | TGTCCACAATACGGGTTAGTGGGAGTGATTGAAAGGCTTGGAGAGTaGTCCTTCTGGGTTTGCTCTGGTTGGGCGATCAGAGTCCATAGC | + |
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Preference number: 6 (lower is better) Translates to: CPQYGLVGVIERLGE*SFWVCSGWAIRVHS Trigger: GCTATGGACTCTGATCGCCCAACCAGAGCAAACCCAGAAGGACAACTCTCCAAGCCTTTCAATCACTCCCACTAACCCGTATTGTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000412553.6 ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CAA 90 bp | TTTTTCAAGCTGCTGTTTGGCTTGTTTGCTCTATCGCTGACAGCATaGGTCCAGAGAAAGCAGCTTGGGGTACAGCCAGACAGGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: FFKLLFGLFALSLTA*VQRKQLGVQPDRAP Trigger: AGGAGCCCTGTCTGGCTGTACCCCAAGCTGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS TCA 72 bp | TGGGCCTTTGATGGAAGAGGCTGCTGTGAAGACCTCTaGCATGCCCTGGAGACATTTTCTCCATTGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WAFDGRGCCEDL*HALETFSPLSW Trigger: CCAAGACAATGGAGAAAATGTCTCCAGGGCATGTCAGAGGTCTTCACAGCAGCCTCTTCCATCAAAGGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS TCA 72 bp | CTGAAACCTAGGTGGAGGTTCCCAAACCTCAATCCTTaGCTTCTGTGCACTCCCAGGTTCAACACCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: LKPRWRFPNLNP*LLCTPRFNTMW Trigger: CCACATGGTGTTGAACCTGGGAGTGCACAGAAGTCAAGGATTGAGGTTTGGGAACCTCCACCTAGGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | CTCCCACCTGGTCCCTCCCACAACATGTGGGAATTATaGGAGCTATGCAGTCTATGCATGTCTATGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: LPPGPSHNMWEL*ELCSLCMSMHA Trigger: AGCATGCATAGACATGCATAGACTGCATAGCTCCCATAATTCCCACATGTTGTGGGAGGGACCAGGTGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 72 bp | GGTGCACGGTGCAAGTTGTTGGTGGATCTACCATTCTaGAATCTGGAGGATGGTGGCCTTCTTCTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: GARCKLLVDLPF*NLEDGGLLLTV Trigger: AACTGTGAGAAGAAGGCCACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | TGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTTaGTGGATCTACCATTCTGGAATCTGGAGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLQLFQVHGASC*WIYHSGIWRMV Trigger: CACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 72 bp | GTGTCTGCAGCTTTTCCAGGTGCACGGTGCAAGTTGTaGGTGGATCTACCATTCTGGAATCTGGAGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: VSAAFPGARCKL*VDLPFWNLEDG Trigger: ACCATCCTCCAGATTCCAGAATGGTAGATCCACCAACAACTTGCACCGTGCACCTGGAAAAGCTGCAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | GGTCCACTGGCACCCACAAGAATTGTTTTTACTTCGTaGTGGAAGATGTGGAGAGCCCATCCAAGAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: GPLAPTRIVFTS*WKMWRAHPRRQ Trigger: CTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCCAGTGGACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS CCA 72 bp | CCACTGGCACCCACAAGAATTGTTTTTACTTCGTGGTaGAAGATGTGGAGAGCCCATCCAAGAAGACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PLAPTRIVFTSW*KMWRAHPRRQQ Trigger: TTGCTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGGTGCCAGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS CCA 72 bp | TGGAAGGCAGGAGGAGCAAGTCACATCTTACGTGAATaGTGGCAGGCAAAACAAAAGAGCTTGTACAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: WKAGGASHILRE*WQAKQKSLYRE Trigger: TTCTCTGTACAAGCTCTTTTGTTTTGCCTGCCACCATTCACGTAAGATGTGACTTGCTCCTCCTGCCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS TCA 72 bp | CAAAGTAGCTGCACTATTTTGCATTTCCATCTTCAGTaGGTGAGAGTTCCTGTTGCTCCACATCCTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: QSSCTILHFHLQ*VRVPVAPHPHQ Trigger: CTGGTGAGGATGTGGAGCAACAGGAACTCTCACTCACTGAAGATGGAAATGCAAAATAGTGCAGCTACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS GCA 72 bp | TGTCTTCTTCTGAGCCCTCCAAACTGTTCCATCCTCTaGCTGTTACCCAGTTCCAAAGTTACTTCCACATTT | + |
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Preference number: 6 (lower is better) Translates to: CLLLSPPNCSIL*LLPSSKVTSTF Trigger: AAATGTGGAAGTAACTTTGGAACTGGGTAACAGGCAGAGGATGGAACAGTTTGGAGGGCTCAGAAGAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | AAGGCAGGAGGAGCAAGTCACATCTTACGTGAATGGTaGCAGGCAAAACAAAAGAGCTTGTACAGAGAAACT | + |
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Preference number: 6 (lower is better) Translates to: KAGGASHILREW*QAKQKSLYRET Trigger: AGTTTCTCTGTACAAGCTCTTTTGTTTTGCCTGCCACCATTCACGTAAGATGTGACTTGCTCCTCCTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 72 bp | GTAGAAAGCATTTTTCAAGCTGCTGTTTGGCTTGTTTaGTCTATCGCTGACAGCATTGGTCCAGAGAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: VESIFQAAVWLV*SIADSIGPEKA Trigger: TGCTTTCTCTGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAATGCTTTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS GCA 72 bp | GGTCCCTCCCACAACATGTGGGAATTATGGGAGCTATaGAGTCTATGCATGTCTATGCATGCTAACAAAATT | + |
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Preference number: 6 (lower is better) Translates to: GPSHNMWELWEL*SLCMSMHANKI Trigger: AATTTTGTTAGCATGCATAGACATGCATAGACTGCATAGCTCCCATAATTCCCACATGTTGTGGGAGGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 72 bp | CCCACAAGAATTGTTTTTACTTCGTGGTGGAAGATGTaGAGAGCCCATCCAAGAAGACAGCAATTTCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: PTRIVFTSWWKM*RAHPRRQQFQE Trigger: TTCCTGAAATTGCTGTCTTCTTGGATGGGCTCTCCACATCTTCCACCACGAAGTAAAAACAATTCTTGTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000454749.1 ENST00000455340.6 ENST00000654746.1 ENST00000670001.1 |
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| CDS GCA 72 bp | TTTAACAGCACCCAAGTCACCTCACGAATGCATTACTaGTTAGAAATTTCCTCCGCCAGATACCCTAAATCA | + |
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Preference number: 6 (lower is better) Translates to: FNSTQVTSRMHY*LEISSARYPKS Trigger: TGATTTAGGGTATCTGGCGGAGGAAATTTCTAAGCAGTAATGCATTCGTGAGGTGACTTGGGTGCTGTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CCA 72 bp | TATGTCCAAGTAGAAAGCATTTTTCAAGCTGCTGTTTaGCTTGTTTGCTCTATCGCTGACAGCATTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: YVQVESIFQAAV*LVCSIADSIGP Trigger: TGGACCAATGCTGTCAGCGATAGAGCAAACAAGCCAAACAGCAGCTTGAAAAATGCTTTCTACTTGGACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000669396.1 ENST00000670001.1 |
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| CDS CAA 72 bp | TCATCTCCCTCTGAGACCACCTCAGCCTGGTCCTTATaGTTCATTCACCTTATTGTTCATTCATATCACCAT | + |
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Preference number: 6 (lower is better) Translates to: SSPSETTSAWSL*FIHLIVHSYHH Trigger: ATGGTGATATGAATGAACAATAAGGTGAATGAACAATAAGGACCAGGCTGAGGTGGTCTCAGAGGGAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | ACAAGTTCCTCATCTCCCTCTGAGACCACCTCAGCCTGGTCCTTATaGTTCATTCACCTTATTGTTCATTCATATCACCATCAGCATTTT | + |
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Preference number: 6 (lower is better) Translates to: TSSSSPSETTSAWSL*FIHLIVHSYHHQHF Trigger: AAAATGCTGATGGTGATATGAATGAACAATAAGGTGAATGAACAATAAGGACCAGGCTGAGGTGGTCTCAGAGGGAGATGAGGAACTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS TCA 72 bp | GGCAGTCAAATCTTAAAGTTCCAAAATGATCTCCTTTaGCTCCATCTCTCACATCTAGGCCATGCTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: GSQILKFQNDLL*LHLSHLGHADV Trigger: TACATCAGCATGGCCTAGATGTGAGAGATGGAGTCAAAGGAGATCATTTTGGAACTTTAAGATTTGACTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | CCTCTGAGACCACCTCAGCCTGGTCCTTATTGTTCATTCACCTTATaGTTCATTCATATCACCATCAGCATTTTTGTCAAAGCCATTCAA | + |
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Preference number: 6 (lower is better) Translates to: PLRPPQPGPYCSFTL*FIHITISIFVKAIQ Trigger: TTGAATGGCTTTGACAAAAATGCTGATGGTGATATGAATGAACAATAAGGTGAATGAACAATAAGGACCAGGCTGAGGTGGTCTCAGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS CAA 90 bp | TTCTATGTCATTCTTAATGCTTCCGTCTCTCTGGTTGAATCTAGATaGGATACAATCAGTGATGCACATTTACCAGACAGAGGATGTGCA | + |
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Preference number: 6 (lower is better) Translates to: FYVILNASVSLVESR*DTISDAHLPDRGCA Trigger: TGCACATCCTCTGTCTGGTAAATGTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAATGACATAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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| CDS GCA 72 bp | TCACCAGCATTTGTTGTTGTCAGTGTCTTCGATTTCTaGCATTCTAATAGATGCATAGTGGCAACACTCATT | + |
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Preference number: 6 (lower is better) Translates to: SPAFVVVSVFDF*HSNRCIVATLI Trigger: AATGAGTGTTGCCACTATGCATCTATTAGAATGGCAGAAATCGAAGACACTGACAACAACAAATGCTGGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000412553.6 ENST00000455340.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 72 bp | TTCTTAATGCTTCCGTCTCTCTGGTTGAATCTAGATTaGATACAATCAGTGATGCACATTTACCAGACAGAG | + |
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Preference number: 6 (lower is better) Translates to: FLMLPSLWLNLD*IQSVMHIYQTE Trigger: CTCTGTCTGGTAAATGTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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| CDS CAA 72 bp | GTTAGTTATTTCCTAGATACAGTGGGGGTACAGCCATaGGGTAAATACAGTCATTCCAAATGGGAGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: VSYFLDTVGVQP*GKYSHSKWEKL Trigger: CAATTTCTCCCATTTGGAATGACTGTATTTACCCAATGGCTGTACCCCCACTGTATCTAGGAAATAACTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412553.6 ENST00000662199.1 ENST00000664962.1 |
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| CDS GCA 72 bp | CACAACATGTGGGAATTATGGGAGCTATGCAGTCTATaGATGTCTATGCATGCTAACAAAATTACTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: HNMWELWELCSL*MSMHANKITLV Trigger: TACAAGAGTAATTTTGTTAGCATGCATAGACATGCATAGACTGCATAGCTCCCATAATTCCCACATGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412553.6 ENST00000654746.1 ENST00000662199.1 ENST00000664962.1 ENST00000669396.1 ENST00000670001.1 |
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| CDS CCA 72 bp | CCATATTCTATGTCATTCTTAATGCTTCCGTCTCTCTaGTTGAATCTAGATTGGATACAATCAGTGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: PYSMSFLMLPSL*LNLDWIQSVMH Trigger: GTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAATGACATAGAATATGG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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| CDS CAA 72 bp | ATTCTTAATGCTTCCGTCTCTCTGGTTGAATCTAGATaGGATACAATCAGTGATGCACATTTACCAGACAGA | + |
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Preference number: 6 (lower is better) Translates to: ILNASVSLVESR*DTISDAHLPDR Trigger: TCTGTCTGGTAAATGTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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| CDS CAA 72 bp | TATTCTATGTCATTCTTAATGCTTCCGTCTCTCTGGTaGAATCTAGATTGGATACAATCAGTGATGCACATT | + |
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Preference number: 6 (lower is better) Translates to: YSMSFLMLPSLW*NLDWIQSVMHI Trigger: AATGTGCATCACTGATTGTATCCAATCTAGATTCAACCAGAGAGACGGAAGCATTAAGAATGACATAGAATA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664962.1 |
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