Pregenerated sensors for LINC00640 (Homo sapiens)
Ensembl gene IDs: ENSG00000258479Ensembl transcript IDs: ENST00000554409.1, ENST00000555801.1, ENST00000556479.6, ENST00000557295.1, ENST00000659908.1, ENST00000665876.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCGCCGAAGGCGTGTGGAGGAGGAGCAGGCCTTGGCGCGCGCCTaGTCTCCACTAGTTTGGGGACGTTGCCGGGGCCCTGCGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: SRRRRVEEEQALARA*SPLVWGRCRGPALP Trigger: GGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTCCTCCTCCACACGCCTTCGGCGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CCA 90 bp | GTGGAGGAGGAGCAGGCCTTGGCGCGCGCCTGCTCTCCACTAGTTTaGGGACGTTGCCGGGGCCCTGCGTTGCCCAGAGGTGCCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: VEEEQALARACSPLV*GRCRGPALPRGATS Trigger: AGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTCCTCCTCCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS GCA 90 bp | GAGCAGGCCTTGGCGCGCGCCTGCTCTCCACTAGTTTGGGGACGTTaGCGGGGCCCTGCGTTGCCCAGAGGTGCCACCTCTTTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: EQALARACSPLVWGR*RGPALPRGATSLSC Trigger: GCAGCTCAAAGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS GCA 90 bp | TCCACTAGTTTGGGGACGTTGCCGGGGCCCTGCGTTGCCCAGAGGTaGCACCTCTTTGAGCTGCAGCCGGGCGAGAAGATCCGCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: STSLGTLPGPCVAQR*HLFELQPGEKIRKM Trigger: CATCTTGCGGATCTTCTCGCCCGGCTGCAGCTCAAAGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS GCA 90 bp | TTCTTGCTAGCTGTCAGCCAGGGGCCACTCTCAGACTCAGGAGGCTaGCTGCAGTTTCTTGTCACATGGTACCTCACTACGTCATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLLAVSQGPLSDSGG*LQFLVTWYLTTSWP Trigger: TGGCCATGACGTAGTGAGGTACCATGTGACAAGAAACTGCAGGCAGCCTCCTGAGTCTGAGAGTGGCCCCTGGCTGACAGCTAGCAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 90 bp | AGGCACAGCCTAACTGGGTCCCCTGCTCAGGGTCTCACAAGGCTGTaGTCTAGGTGTCGACACAGCTACATTCTTTTCTGGAGTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: RHSLTGSPAQGLTRL*SRCRHSYILFWSLE Trigger: CTCCAGACTCCAGAAAAGAATGTAGCTGTGTCGACACCTAGATCACAGCCTTGTGAGACCCTGAGCAGGGGACCCAGTTAGGCTGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 90 bp | GTGCAGCCATTCCCTGGGGCTTCACAGTCCTGGCTGGATTCTCTATaGGAGGCTGGTACACAAAGGCTTTGCTGCAATGGGCTCATCTAC | + |
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Preference number: 5 (lower is better) Translates to: VQPFPGASQSWLDSL*EAGTQRLCCNGLIY Trigger: GTAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CCA 90 bp | TATGGGAACAATGACAGGAAGAACATTAGAGGAAGAAGGAGAGGGTaGACACATCCGCTGGGCAGGAAGGAGCTCCGAGTGACAGTGACA | + |
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Preference number: 5 (lower is better) Translates to: YGNNDRKNIRGRRRG*THPLGRKELRVTVT Trigger: TGTCACTGTCACTCGGAGCTCCTTCCTGCCCAGCGGATGTGTCCACCCTCTCCTTCTTCCTCTAATGTTCTTCCTGTCATTGTTCCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CCA 90 bp | ATTCCCTGGGGCTTCACAGTCCTGGCTGGATTCTCTATGAGAGGCTaGTACACAAAGGCTTTGCTGCAATGGGCTCATCTACACTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: IPWGFTVLAGFSMRG*YTKALLQWAHLHWN Trigger: GTTCCAGTGTAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CCA 90 bp | TCTGACTTGAAGTGCAGCCATTCCCTGGGGCTTCACAGTCCTGGCTaGATTCTCTATGAGAGGCTGGTACACAAAGGCTTTGCTGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SDLKCSHSLGLHSPG*ILYERLVHKGFAAM Trigger: CATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCACTTCAAGTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS TCA 90 bp | TGTGTATGTGATTTCAGAGAGTTCACTTCCTTGAAGCTGGAGGACTaGGGTCCCTGTTTTCTTGCTAGCTGTCAGCCAGGGGCCACTCTC | + |
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Preference number: 5 (lower is better) Translates to: CVCDFREFTSLKLED*GPCFLASCQPGATL Trigger: GAGAGTGGCCCCTGGCTGACAGCTAGCAAGAAAACAGGGACCTCAGTCCTCCAGCTTCAAGGAAGTGAACTCTCTGAAATCACATACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 90 bp | CAGCCTAGGGACACAGCAAGACCCACGTTCTCTTCCTCCGATGCTTaGTTCCACCCGGGGTTCACAATAAGTCTGTGCAATGTGTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: QPRDTARPTFSSSDA*FHPGFTISLCNVFV Trigger: AACAAACACATTGCACAGACTTATTGTGAACCCCGGGTGGAATCAAGCATCGGAGGAAGAGAACGTGGGTCTTGCTGTGTCCCTAGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CCA 90 bp | GCTGGATTCTCTATGAGAGGCTGGTACACAAAGGCTTTGCTGCAATaGGCTCATCTACACTGGAACACAGGATGGGAGGGAGTTACGTAT | + |
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Preference number: 5 (lower is better) Translates to: AGFSMRGWYTKALLQ*AHLHWNTGWEGVTY Trigger: ATACGTAACTCCCTCCCATCCTGTGTTCCAGTGTAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS GCA 90 bp | ACGCCCCATCTGATGGAAGAAAGGAAACACATGCCCACCCATTTTTaGACCTGGGTCTTTCATTTGCCTTTACACTGGACTCTTGCAAGC | + |
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Preference number: 5 (lower is better) Translates to: TPHLMEERKHMPTHF*TWVFHLPLHWTLAS Trigger: GCTTGCAAGAGTCCAGTGTAAAGGCAAATGAAAGACCCAGGTGCAAAAATGGGTGGGCATGTGTTTCCTTTCTTCCATCAGATGGGGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CCA 90 bp | TCTGACTTGAAGTGCAGCCATTCCCTGGGGCTTCACAGTCCTGGCTaGATTCTTTATCTCGAAAATCAATTTCCACCAACCCAAGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: SDLKCSHSLGLHSPG*ILYLENQFPPTQAQ Trigger: CTGAGCTTGGGTTGGTGGAAATTGATTTTCGAGATAAAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCACTTCAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554409.1 ENST00000556479.6 ENST00000659908.1 |
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| CDS CCA 90 bp | CATCTGATGGAAGAAAGGAAACACATGCCCACCCATTTTTGCACCTaGGTCTTTCATTTGCCTTTACACTGGACTCTTGCAAGCCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: HLMEERKHMPTHFCT*VFHLPLHWTLASPK Trigger: CTTAGGGCTTGCAAGAGTCCAGTGTAAAGGCAAATGAAAGACCCAGGTGCAAAAATGGGTGGGCATGTGTTTCCTTTCTTCCATCAGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CCA 90 bp | ACAAAGGCTTTGCTGCAATGGGCTCATCTACACTGGAACACAGGATaGGAGGGAGTTACGTATGGGAACAATGACAGGAAGAACATTAGA | + |
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Preference number: 5 (lower is better) Translates to: TKALLQWAHLHWNTG*EGVTYGNNDRKNIR Trigger: TCTAATGTTCTTCCTGTCATTGTTCCCATACGTAACTCCCTCCCATCCTGTGTTCCAGTGTAGATGAGCCCATTGCAGCAAAGCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS TCA 90 bp | CAAACAATGAGAGTTGGCACAGGATACAAGACTTCTGTCCTTCTATaGCATGGATTTCTTCAGCATCCAGGTTTGCAGACTAATGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: QTMRVGTGYKTSVLL*HGFLQHPGLQTNEH Trigger: ATGCTCATTAGTCTGCAAACCTGGATGCTGAAGAAATCCATGTCATAGAAGGACAGAAGTCTTGTATCCTGTGCCAACTCTCATTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659908.1 ENST00000665876.1 |
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| CDS GCA 90 bp | TACCTCACTACGTCATGGCCAAAAGGAGAATCAATCCTTCCAGTCTaGTATAATGGCAGTTTACATAGCAATAACATAACCACGGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: YLTTSWPKGESILPV*YNGSLHSNNITTEV Trigger: CACTTCCGTGGTTATGTTATTGCTATGTAAACTGCCATTATAGCAGACTGGAAGGATTGATTCTCCTTTTGGCCATGACGTAGTGAGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 72 bp | GCCTGGCACCAAGGAAGACGCCGCCGCCCCACCTCCTaGGCCGCCGAAGGCGTGTGGAGGAGGAGCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AWHQGRRRRPTS*AAEGVWRRSRP Trigger: AGGCCTGCTCCTCCTCCACACGCCTTCGGCGGCTCAGGAGGTGGGGCGGCGGCGTCTTCCTTGGTGCCAGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CAA 72 bp | GGAGCAGGCCTTGGCGCGCGCCTGCTCTCCACTAGTTaGGGGACGTTGCCGGGGCCCTGCGTTGCCCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: GAGLGARLLSTS*GTLPGPCVAQR Trigger: CCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CAA 90 bp | TGTGGAGGAGGAGCAGGCCTTGGCGCGCGCCTGCTCTCCACTAGTTaGGGGACGTTGCCGGGGCCCTGCGTTGCCCAGAGGTGCCACCTC | + |
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Preference number: 6 (lower is better) Translates to: CGGGAGLGARLLSTS*GTLPGPCVAQRCHL Trigger: GAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTCCTCCTCCACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CCA 72 bp | GAGCAGGCCTTGGCGCGCGCCTGCTCTCCACTAGTTTaGGGACGTTGCCGGGGCCCTGCGTTGCCCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: EQALARACSPLV*GRCRGPALPRG Trigger: ACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS GCA 72 bp | TTGGCGCGCGCCTGCTCTCCACTAGTTTGGGGACGTTaGCGGGGCCCTGCGTTGCCCAGAGGTGCCACCTCT | + |
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Preference number: 6 (lower is better) Translates to: LARACSPLVWGR*RGPALPRGATS Trigger: AGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CAA 72 bp | CTGAGCCGCCGAAGGCGTGTGGAGGAGGAGCAGGCCTaGGCGCGCGCCTGCTCTCCACTAGTTTGGGGACGT | + |
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Preference number: 6 (lower is better) Translates to: LSRRRRVEEEQA*ARACSPLVWGR Trigger: ACGTCCCCAAACTAGTGGAGAGCAGGCGCGCGCCAAGGCCTGCTCCTCCTCCACACGCCTTCGGCGGCTCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CAA 90 bp | CGCGCCTGCTCTCCACTAGTTTGGGGACGTTGCCGGGGCCCTGCGTaGCCCAGAGGTGCCACCTCTTTGAGCTGCAGCCGGGCGAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RACSPLVWGRCRGPA*PRGATSLSCSRARR Trigger: TCTTCTCGCCCGGCTGCAGCTCAAAGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGAGCAGGCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS TCA 72 bp | GCCGGGGCCCTGCGTTGCCCAGAGGTGCCACCTCTTTaGGCTGCAGCCGGGCGAGAAGATCCGCAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: AGALRCPEVPPL*AAAGREDPQDE Trigger: TTCATCTTGCGGATCTTCTCGCCCGGCTGCAGCTCAAAGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS CAA 72 bp | TCTCCACTAGTTTGGGGACGTTGCCGGGGCCCTGCGTaGCCCAGAGGTGCCACCTCTTTGAGCTGCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SPLVWGRCRGPA*PRGATSLSCSR Trigger: CCGGCTGCAGCTCAAAGAGGTGGCACCTCTGGGCAACGCAGGGCCCCGGCAACGTCCCCAAACTAGTGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665876.1 |
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| CDS TCA 72 bp | CACATGATGATTCAGGGACCCAGGCTCCTTCTGACTTaGAGTGCAGCCATTCCCTGGGGCTTCACAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: HMMIQGPRLLLT*SAAIPWGFTVL Trigger: CAGGACTGTGAAGCCCCAGGGAATGGCTGCACTTCAAGTCAGAAGGAGCCTGGGTCCCTGAATCATCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554409.1 ENST00000555801.1 ENST00000556479.6 ENST00000659908.1 |
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| CDS GCA 72 bp | TCAGCCAGGGGCCACTCTCAGACTCAGGAGGCTGCCTaGAGTTTCTTGTCACATGGTACCTCACTACGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SARGHSQTQEAA*SFLSHGTSLRH Trigger: ATGACGTAGTGAGGTACCATGTGACAAGAAACTGCAGGCAGCCTCCTGAGTCTGAGAGTGGCCCCTGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 72 bp | TTCCCTGGGGCTTCACAGTCCTGGCTGGATTCTCTATaGGAGGCTGGTACACAAAGGCTTTGCTGCAATGGG | + |
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Preference number: 6 (lower is better) Translates to: FPGASQSWLDSL*EAGTQRLCCNG Trigger: CCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CCA 72 bp | AGTTTCTATAGGTCAGGAGTTGAGGCACAGCCTAACTaGGTCCCCTGCTCAGGGTCTCACAAGGCTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: SFYRSGVEAQPN*VPCSGSHKAVI Trigger: GATCACAGCCTTGTGAGACCCTGAGCAGGGGACCCAGTTAGGCTGTGCCTCAACTCCTGACCTATAGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS CCA 72 bp | AAGTGCAGCCATTCCCTGGGGCTTCACAGTCCTGGCTaGATTCTCTATGAGAGGCTGGTACACAAAGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: KCSHSLGLHSPG*ILYERLVHKGF Trigger: AAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CAA 72 bp | GGACACAGCAAGACCCACGTTCTCTTCCTCCGATGCTaGATTCCACCCGGGGTTCACAATAAGTCTGTGCAA | + |
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Preference number: 6 (lower is better) Translates to: GHSKTHVLFLRC*IPPGVHNKSVQ Trigger: TTGCACAGACTTATTGTGAACCCCGGGTGGAATCAAGCATCGGAGGAAGAGAACGTGGGTCTTGCTGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS TCA 72 bp | GACACAGCAAGACCCACGTTCTCTTCCTCCGATGCTTaGTTCCACCCGGGGTTCACAATAAGTCTGTGCAAT | + |
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Preference number: 6 (lower is better) Translates to: DTARPTFSSSDA*FHPGFTISLCN Trigger: ATTGCACAGACTTATTGTGAACCCCGGGTGGAATCAAGCATCGGAGGAAGAGAACGTGGGTCTTGCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CCA 72 bp | TCTATGAGAGGCTGGTACACAAAGGCTTTGCTGCAATaGGCTCATCTACACTGGAACACAGGATGGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: SMRGWYTKALLQ*AHLHWNTGWEG Trigger: TCCCTCCCATCCTGTGTTCCAGTGTAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CCA 72 bp | GGCTTCACAGTCCTGGCTGGATTCTCTATGAGAGGCTaGTACACAAAGGCTTTGCTGCAATGGGCTCATCTA | + |
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Preference number: 6 (lower is better) Translates to: GFTVLAGFSMRG*YTKALLQWAHL Trigger: TAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGCCAGGACTGTGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS CAA 72 bp | CACCCATTTATCATCTCAGTTTCTATAGGTCAGGAGTaGAGGCACAGCCTAACTGGGTCCCCTGCTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: HPFIISVSIGQE*RHSLTGSPAQG Trigger: ACCCTGAGCAGGGGACCCAGTTAGGCTGTGCCTCAACTCCTGACCTATAGAAACTGAGATGATAAATGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS CCA 72 bp | TTAAGTTCCTGCTTGTGGTCCATTGCACCATTGAACTaGGTGGAGAGCCTTCCACATGATGATTCAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: LSSCLWSIAPLN*VESLPHDDSGT Trigger: GGTCCCTGAATCATCATGTGGAAGGCTCTCCACCCAGTTCAATGGTGCAATGGACCACAAGCAGGAACTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554409.1 ENST00000555801.1 ENST00000556479.6 ENST00000659908.1 |
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| CDS CAA 72 bp | GCTGGATTCTCTATGAGAGGCTGGTACACAAAGGCTTaGCTGCAATGGGCTCATCTACACTGGAACACAGGA | + |
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Preference number: 6 (lower is better) Translates to: AGFSMRGWYTKA*LQWAHLHWNTG Trigger: TCCTGTGTTCCAGTGTAGATGAGCCCATTGCAGCAAAGCCTTTGTGTACCAGCCTCTCATAGAGAATCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555801.1 |
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| CDS TCA 72 bp | GGAGTCTGGAGTTTGGGGTCCTCTTCCATGTGTATGTaGTTTCAGAGAGTTCACTTCCTTGAAGCTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GVWSLGSSSMCM*FQRVHFLEAGG Trigger: TCCTCCAGCTTCAAGGAAGTGAACTCTCTGAAATCACATACACATGGAAGAGGACCCCAAACTCCAGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS CCA 72 bp | CTTGAAGTGCAGCCATTCCCTGGGGCTTCACAGTCCTaGCTGGATTCTTTATCTCGAAAATCAATTTCCACC | + |
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Preference number: 6 (lower is better) Translates to: LEVQPFPGASQS*LDSLSRKSIST Trigger: GGTGGAAATTGATTTTCGAGATAAAGAATCCAGCCAGGACTGTGAAGCCCCAGGGAATGGCTGCACTTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000554409.1 ENST00000556479.6 ENST00000659908.1 |
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| CDS CAA 90 bp | TTAAAACAACACCCATTTATCATCTCAGTTTCTATAGGTCAGGAGTaGAGGCACAGCCTAACTGGGTCCCCTGCTCAGGGTCTCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LKQHPFIISVSIGQE*RHSLTGSPAQGLTR Trigger: CCTTGTGAGACCCTGAGCAGGGGACCCAGTTAGGCTGTGCCTCAACTCCTGACCTATAGAAACTGAGATGATAAATGGGTGTTGTTTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS CAA 90 bp | TTGCAAGCCCTAAGCAGGACATTGCATCAAGCTAATGGGCTTGTGTaGAGGTCTCTTTCAACTCACCCCAAGCCTTGGGAGAGTCATATT | + |
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Preference number: 6 (lower is better) Translates to: LQALSRTLHQANGLV*RSLSTHPKPWESHI Trigger: AATATGACTCTCCCAAGGCTTGGGGTGAGTTGAAAGAGACCTCAACACAAGCCCATTAGCTTGATGCAATGTCCTGCTTAGGGCTTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CAA 90 bp | CCCATTTTTGCACCTGGGTCTTTCATTTGCCTTTACACTGGACTCTaGCAAGCCCTAAGCAGGACATTGCATCAAGCTAATGGGCTTGTG | + |
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Preference number: 6 (lower is better) Translates to: PIFAPGSFICLYTGL*QALSRTLHQANGLV Trigger: CACAAGCCCATTAGCTTGATGCAATGTCCTGCTTAGGGCTTGCAAGAGTCCAGTGTAAAGGCAAATGAAAGACCCAGGTGCAAAAATGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CAA 72 bp | CTTTACACTGGACTCTTGCAAGCCCTAAGCAGGACATaGCATCAAGCTAATGGGCTTGTGTTGAGGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LYTGLLQALSRT*HQANGLVLRSL Trigger: AAGAGACCTCAACACAAGCCCATTAGCTTGATGCAATGTCCTGCTTAGGGCTTGCAAGAGTCCAGTGTAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CAA 90 bp | TTCATTTGCCTTTACACTGGACTCTTGCAAGCCCTAAGCAGGACATaGCATCAAGCTAATGGGCTTGTGTTGAGGTCTCTTTCAACTCAC | + |
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Preference number: 6 (lower is better) Translates to: FICLYTGLLQALSRT*HQANGLVLRSLSTH Trigger: GTGAGTTGAAAGAGACCTCAACACAAGCCCATTAGCTTGATGCAATGTCCTGCTTAGGGCTTGCAAGAGTCCAGTGTAAAGGCAAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS GCA 72 bp | CTGATGGAAGAAAGGAAACACATGCCCACCCATTTTTaGACCTGGGTCTTTCATTTGCCTTTACACTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LMEERKHMPTHF*TWVFHLPLHWT Trigger: AGTCCAGTGTAAAGGCAAATGAAAGACCCAGGTGCAAAAATGGGTGGGCATGTGTTTCCTTTCTTCCATCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556479.6 |
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| CDS CCA 72 bp | TCGACACAGCTACATTCTTTTCTGGAGTCTGGAGTTTaGGGTCCTCTTCCATGTGTATGTGATTTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: STQLHSFLESGV*GPLPCVCDFRE Trigger: CTCTCTGAAATCACATACACATGGAAGAGGACCCCAAACTCCAGACTCCAGAAAAGAATGTAGCTGTGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS CCA 72 bp | CCAACCCAAGCTCAGTATTCATTCATAGCAGGAAGCTaGATTCAGGGTGCTTTTCCACCTGGAAAAGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: PTQAQYSFIAGS*IQGAFPPGKEF Trigger: AAACTCTTTTCCAGGTGGAAAAGCACCCTGAATCCAGCTTCCTGCTATGAATGAATACTGAGCTTGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000556479.6 ENST00000665876.1 |
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| CDS CCA 72 bp | CCAACCCAAGCTCAGTATTCATTCATAGCAGGAAGCTaGATTCAGGGTGCTTTTCCACCTGAAAGCCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: PTQAQYSFIAGS*IQGAFPPESQN Trigger: ATTTTGGCTTTCAGGTGGAAAAGCACCCTGAATCCAGCTTCCTGCTATGAATGAATACTGAGCTTGGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000554409.1 ENST00000659908.1 |
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| CDS TCA 72 bp | TTCCATGTGTATGTGATTTCAGAGAGTTCACTTCCTTaGAGCTGGAGGACTGAGGTCCCTGTTTTCTTGCTA | + |
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Preference number: 6 (lower is better) Translates to: FHVYVISESSLP*SWRTEVPVFLL Trigger: TAGCAAGAAAACAGGGACCTCAGTCCTCCAGCTTCAAGGAAGTGAACTCTCTGAAATCACATACACATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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| CDS TCA 72 bp | AGAGTTGGCACAGGATACAAGACTTCTGTCCTTCTATaGCATGGATTTCTTCAGCATCCAGGTTTGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: RVGTGYKTSVLL*HGFLQHPGLQT Trigger: AGTCTGCAAACCTGGATGCTGAAGAAATCCATGTCATAGAAGGACAGAAGTCTTGTATCCTGTGCCAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659908.1 ENST00000665876.1 |
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| CDS CAA 72 bp | TCTAAATTAAGTTCCTGCTTGTGGTCCATTGCACCATaGAACTGGGTGGAGAGCCTTCCACATGATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: SKLSSCLWSIAP*NWVESLPHDDS Trigger: TGAATCATCATGTGGAAGGCTCTCCACCCAGTTCAATGGTGCAATGGACCACAAGCAGGAACTTAATTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000554409.1 ENST00000555801.1 ENST00000556479.6 ENST00000659908.1 |
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| CDS CCA 72 bp | ACTCCAGTGAGTTGGTTGCAAATATTATCTTTTACTTaGACCTCAGAGCCATCTGGCATAATTGAGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: TPVSWLQILSFT*TSEPSGIIETA Trigger: TGCAGTCTCAATTATGCCAGATGGCTCTGAGGTCCAAGTAAAAGATAATATTTGCAACCAACTCACTGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000554409.1 ENST00000556479.6 ENST00000659908.1 ENST00000665876.1 |
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| CDS GCA 72 bp | ACGTCATGGCCAAAAGGAGAATCAATCCTTCCAGTCTaGTATAATGGCAGTTTACATAGCAATAACATAACC | + |
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Preference number: 6 (lower is better) Translates to: TSWPKGESILPV*YNGSLHSNNIT Trigger: GGTTATGTTATTGCTATGTAAACTGCCATTATAGCAGACTGGAAGGATTGATTCTCCTTTTGGCCATGACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557295.1 |
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