Pregenerated sensors for LINC00630 (Homo sapiens)
Ensembl gene IDs: ENSG00000223546Ensembl transcript IDs: ENST00000416381.1, ENST00000420471.5, ENST00000431616.5, ENST00000435966.1, ENST00000440496.5, ENST00000656628.1, ENST00000658813.1, ENST00000658880.1, ENST00000661018.1, ENST00000663114.1, ENST00000664568.1, ENST00000666631.1, ENST00000668536.1, ENST00000670178.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACCTGGCCACAGTGCCAGACCTATCCCACTAACTCTAGGTGCCCTTaGGTAAGTCACCACACTGCATCTATACTCACCTGGCAAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: TWPQCQTYPTNSRCP*VSHHTASILTWQRG Trigger: CCCTCTTTGCCAGGTGAGTATAGATGCAGTGTGGTGACTTACTCAAGGGCACCTAGAGTTAGTGGGATAGGTCTGGCACTGTGGCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 90 bp | TTCCATTCACCATTGTCCTTCAGGGACATCCTGGCAAAGAGGGACTaGGTAGCCCTGTCTCCAGCAAGATCTCAGGGACAGAGAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: FHSPLSFRDILAKRD*VALSPARSQGQRAM Trigger: CATTGCTCTCTGTCCCTGAGATCTTGCTGGAGACAGGGCTACTCAGTCCCTCTTTGCCAGGATGTCCCTGAAGGACAATGGTGAATGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668536.1 |
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| CDS CCA 90 bp | CTCCTTGTGTTTACCCTTCCTGCATTTCCAGCAGAAAACCAGGCTTaGGCCTCTTTCCCTCTGTCTCAGGAAGGGTTTATAGCAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LLVFTLPAFPAENQA*ASFPLSQEGFIAGL Trigger: CAGCCCTGCTATAAACCCTTCCTGAGACAGAGGGAAAGAGGCCCAAGCCTGGTTTTCTGCTGGAAATGCAGGAAGGGTAAACACAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS TCA 90 bp | AGTAAGTCACCACACTGCATCTATACTCACCTGGCAAAGAGGGACTaGGTAGCCCTGTCTCCAGCAAGATCTCAGGGACAGAGAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: SKSPHCIYTHLAKRD*VALSPARSQGQRAM Trigger: CATTGCTCTCTGTCCCTGAGATCTTGCTGGAGACAGGGCTACTCAGTCCCTCTTTGCCAGGTGAGTATAGATGCAGTGTGGTGACTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 90 bp | GGAACCAGGCTTGGTGTTCCTTCCCCTTGCCTTAGGGGAGGTTTATaGCAGGGTTGGGAGCCAAAGATGTCTGAATCCAGTTTCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: GTRLGVPSPCLRGGL*QGWEPKMSESSFFH Trigger: ATGGAAGAAACTGGATTCAGACATCTTTGGCTCCCAACCCTGTCATAAACCTCCCCTAAGGCAAGGGGAAGGAACACCAAGCCTGGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS GCA 90 bp | AGCTCAGACATCCACATGAAGAGATGGATGACTGATGCTGGCATCTaGTGGGAGCTTAGTAGGGGCTACTGTGTAGAGCACCTTGGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSDIHMKRWMTDAGI*WELSRGYCVEHLGS Trigger: TGAACCAAGGTGCTCTACACAGTAGCCCCTACTAAGCTCCCAGCAGATGCCAGCATCAGTCATCCATCTCTTCATGTGGATGTCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658813.1 |
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| CDS GCA 90 bp | GGCCTCTTTCCCTCTGTCTCAGGAAGGGTTTATAGCAGGGCTGGATaGAGAAGCTGTCTGAAGCCAGTGTTTGCTTCATCCTGCATGAAA | + |
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Preference number: 5 (lower is better) Translates to: GLFPSVSGRVYSRAG*RSCLKPVFASSCMK Trigger: TTTCATGCAGGATGAAGCAAACACTGGCTTCAGACAGCTTCTGCATCCAGCCCTGCTATAAACCCTTCCTGAGACAGAGGGAAAGAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS TCA 90 bp | ATATGGTTTGGCTGTGTCCCCATCGTCCCCATCGAAATCTCAACTTaGATTGTATCTCCCGGAATTCCCACATGTTGTGGGAGGGACCCA | + |
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Preference number: 5 (lower is better) Translates to: IWFGCVPIVPIEIST*IVSPGIPTCCGRDP Trigger: TGGGTCCCTCCCACAACATGTGGGAATTCCGGGAGATACAATTCAAGTTGAGATTTCGATGGGGACGATGGGGACACAGCCAAACCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS CCA 90 bp | CAGGCATGTAAAATAATGTATAGTGACAGGCATGCTGTGTTTACCTaGGGCAAGGCAGTGGGAAGGGTAGGTAGGCCAGGTACTACAGAA | + |
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Preference number: 5 (lower is better) Translates to: QACKIMYSDRHAVFT*GKAVGRVGRPGTTE Trigger: TTCTGTAGTACCTGGCCTACCTACCCTTCCCACTGCCTTGCCCCAGGTAAACACAGCATGCCTGTCACTATACATTATTTTACATGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440496.5 |
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| CDS GCA 90 bp | TGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATaGCTCAGGGATCTAGAACTAGAAATACCATTTGACCCAGCCATC | + |
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Preference number: 5 (lower is better) Translates to: WDCKLVQPLWKSVWR*LRDLELEIPFDPAI Trigger: GATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS TCA 90 bp | ACAACATCTCTTGGTGATGATGATGATGGTGGTGATGGTGATGGTTaGAATGAAATCCTCTCTCTGGGCACAGGAGACTTTGATATGGGG | + |
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Preference number: 5 (lower is better) Translates to: TTSLGDDDDGGDGDG*NEILSLGTGDFDMG Trigger: CCCCATATCAAAGTCTCCTGTGCCCAGAGAGAGGATTTCATTTCAACCATCACCATCACCACCATCATCATCATCACCAAGAGATGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000420471.5 ENST00000435966.1 ENST00000656628.1 ENST00000663114.1 |
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| CDS TCA 90 bp | CCCCTTTTACAGATGAGCAAGGGCAAAGTAGAATGGCAAAGGATTTaGTTACCACAGAAACTGAGAGAGCCAGAGATAGTAGCTGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: PLLQMSKGKVEWQRI*LPQKLREPEIVAGN Trigger: GTTGCCAGCTACTATCTCTGGCTCTCTCAGTTTCTGTGGTAATCAAATCCTTTGCCATTCTACTTTGCCCTTGCTCATCTGTAAAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS CCA 90 bp | TGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGCGATGCCTCAGGGATCTAGAACTAGAAATACCATTTGACCCA | + |
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Preference number: 5 (lower is better) Translates to: CWWDCKLVQPLWKSV*RCLRDLELEIPFDP Trigger: TGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS GCA 90 bp | ACCACTCTGAGTTCCTCAAACAGATGTATGTACTCCCATGTTCACTaGAGCATTATTCACAATAGCCAGGGTATGGAATCAACCTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: TTLSSSNRCMYSHVH*SIIHNSQGMESTSL Trigger: GAGAGAGGTTGATTCCATACCCTGGCTATTGTGAATAATGCTGCAGTGAACATGGGAGTACATACATCTGTTTGAGGAACTCAGAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420471.5 ENST00000440496.5 ENST00000656628.1 ENST00000661018.1 ENST00000663114.1 ENST00000664568.1 ENST00000668536.1 |
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| CDS CCA 90 bp | ATGCAGGGCCATGATAATTCCATACATGGCCTAGGGAGGACAAATTaGTACAACCTCTTTGCAGAGACATTTGGCAACATTCAACAACCT | + |
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Preference number: 5 (lower is better) Translates to: MQGHDNSIHGLGRTN*YNLFAETFGNIQQP Trigger: AGGTTGTTGAATGTTGCCAAATGTCTCTGCAAAGAGGTTGTACCAATTTGTCCTCCCTAGGCCATGTATGGAATTATCATGGCCCTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CCA 90 bp | ACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTaGAAGTCAGTGTGGCGATGCCTCAGGGATCTAGAACTAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TLLHCWWDCKLVQPL*KSVWRCLRDLELEI Trigger: TATTTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS GCA 90 bp | TTCTTCCATTCTTTAGGAAACTTAAACTTAAGGGAAAGATTGGACTaGTTGTTATCTGGTAGGAAAGGGAAGGCCTCTGAGGACATAGAG | + |
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Preference number: 5 (lower is better) Translates to: FFHSLGNLNLRERLD*LLSGRKGKASEDIE Trigger: CTCTATGTCCTCAGAGGCCTTCCCTTTCCTACCAGATAACAAGCAGTCCAATCTTTCCCTTAAGTTTAAGTTTCCTAAAGAATGGAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS GCA 90 bp | GCCATCCCATTACTGGGTATATACCCAAAGGATTATAAATCATGCTaGTATAAAGACACATGCACACGTATGTTTATTGCAGCACTATTC | + |
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Preference number: 5 (lower is better) Translates to: AIPLLGIYPKDYKSC*YKDTCTRMFIAALF Trigger: GAATAGTGCTGCAATAAACATACGTGTGCATGTGTCTTTATAGCAGCATGATTTATAATCCTTTGGGTATATACCCAGTAATGGGATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CCA 90 bp | CACACGTATGTTTATTGCAGCACTATTCACACAATAGCAAAGACTTaGAGCCAACCCAAATGTCCAACAATGATAGACTGGATTAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: HTYVYCSTIHTIAKT*SQPKCPTMIDWIKK Trigger: TTTCTTAATCCAGTCTATCATTGTTGGACATTTGGGTTGGCTCCAAGTCTTTGCTATTGTGTGAATAGTGCTGCAATAAACATACGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS TCA 72 bp | CCCACATGTTGTGGGAGGGACCCAGGGGGAGGTAACTaGATCATGGGGGCCAGTCTTTCTCGTGCTATTCTC | + |
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Preference number: 6 (lower is better) Translates to: PTCCGRDPGGGN*IMGASLSRAIL Trigger: GAGAATAGCACGAGAAAGACTGGCCCCCATGATTCAGTTACCTCCCCCTGGGTCCCTCCCACAACATGTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 72 bp | GAAGGGAGAAGAAGAGAGGTTTCTCCTGGACAGGGATaGGGTCAGAGGTCTACAGGTCCCTCTGGGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: EGRRREVSPGQG*GQRSTGPSGSR Trigger: CCTACTCCCAGAGGGACCTGTAGACCTCTGACCTCATCCCTGTCCAGGAGAAACCTCTCTTCTTCTCCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS TCA 72 bp | CCATTGTCCTTCAGGGACATCCTGGCAAAGAGGGACTaGGTAGCCCTGTCTCCAGCAAGATCTCAGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: PLSFRDILAKRD*VALSPARSQGQ Trigger: CTGTCCCTGAGATCTTGCTGGAGACAGGGCTACTCAGTCCCTCTTTGCCAGGATGTCCCTGAAGGACAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668536.1 |
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| CDS CAA 72 bp | CTTCAGTCCTCTGTGGCCGACCTCACATGCCTCCCCTaGGGGAGTTTAAATGGCACAACTCTATGTGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LQSSVADLTCLP*GSLNGTTLCVP Trigger: TGGCACACATAGAGTTGTGCCATTTAAACTCCCCAAGGGGAGGCATGTGAGGTCGGCCACAGAGGACTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000416381.1 ENST00000656628.1 ENST00000658813.1 |
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| CDS GCA 72 bp | CCCTCTGTCTCAGGAAGGGTTTATAGCAGGGCTGGATaGAGAAGCTGTCTGAAGCCAGTGTTTGCTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: PSVSGRVYSRAG*RSCLKPVFASS Trigger: GGATGAAGCAAACACTGGCTTCAGACAGCTTCTGCATCCAGCCCTGCTATAAACCCTTCCTGAGACAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS CCA 72 bp | TGGACATGCAGATGGATATGGGACAGGAGACATACCTaGCCACAGTGCCAGACCTATCCCACTAACTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: WTCRWIWDRRHT*PQCQTYPTNSR Trigger: CCTAGAGTTAGTGGGATAGGTCTGGCACTGTGGCCAGGTATGTCTCCTGTCCCATATCCATCTGCATGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS CAA 90 bp | GATATGGTTTGGCTGTGTCCCCATCGTCCCCATCGAAATCTCAACTaGAATTGTATCTCCCGGAATTCCCACATGTTGTGGGAGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: DMVWLCPHRPHRNLN*NCISRNSHMLWEGP Trigger: GGGTCCCTCCCACAACATGTGGGAATTCCGGGAGATACAATTCAAGTTGAGATTTCGATGGGGACGATGGGGACACAGCCAAACCATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 72 bp | CAGTGCCAGACCTATCCCACTAACTCTAGGTGCCCTTaGGTAAGTCACCACACTGCATCTATACTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: QCQTYPTNSRCP*VSHHTASILTW Trigger: CCAGGTGAGTATAGATGCAGTGTGGTGACTTACTCAAGGGCACCTAGAGTTAGTGGGATAGGTCTGGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 72 bp | CTTGGTGTTCCTTCCCCTTGCCTTAGGGGAGGTTTATaGCAGGGTTGGGAGCCAAAGATGTCTGAATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LGVPSPCLRGGL*QGWEPKMSESS Trigger: ACTGGATTCAGACATCTTTGGCTCCCAACCCTGTCATAAACCTCCCCTAAGGCAAGGGGAAGGAACACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS GCA 72 bp | ATCCACATGAAGAGATGGATGACTGATGCTGGCATCTaGTGGGAGCTTAGTAGGGGCTACTGTGTAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: IHMKRWMTDAGI*WELSRGYCVEH Trigger: GTGCTCTACACAGTAGCCCCTACTAAGCTCCCAGCAGATGCCAGCATCAGTCATCCATCTCTTCATGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658813.1 |
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| CDS CAA 72 bp | GTGTCCCCATCGTCCCCATCGAAATCTCAACTTGAATaGTATCTCCCGGAATTCCCACATGTTGTGGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: VSPSSPSKSQLE*YLPEFPHVVGG Trigger: CCCTCCCACAACATGTGGGAATTCCGGGAGATACAATTCAAGTTGAGATTTCGATGGGGACGATGGGGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000664568.1 |
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| CDS TCA 72 bp | AACTGCTTTTCCAGTATCAATCTGGCAAAGAGGGACTaGGTAGCCCTGTCTCCAGCAAGATCTCAGGGACAG | + |
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Preference number: 6 (lower is better) Translates to: NCFSSINLAKRD*VALSPARSQGQ Trigger: CTGTCCCTGAGATCTTGCTGGAGACAGGGCTACTCAGTCCCTCTTTGCCAGATTGATACTGGAAAAGCAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000440496.5 ENST00000658813.1 ENST00000661018.1 |
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| CDS GCA 72 bp | GCCATTTGTCCAAGCAAAGTGATCAACCAGGTACACTaGTCAAAGTTCTGCCCACCGGGAGAGTTTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: AICPSKVINQVH*SKFCPPGEFPF Trigger: GAATGGAAACTCTCCCGGTGGGCAGAACTTTGAGCAGTGTACCTGGTTGATCACTTTGCTTGGACAAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668536.1 |
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| CDS CCA 72 bp | AAAATAATGTATAGTGACAGGCATGCTGTGTTTACCTaGGGCAAGGCAGTGGGAAGGGTAGGTAGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KIMYSDRHAVFT*GKAVGRVGRPG Trigger: ACCTGGCCTACCTACCCTTCCCACTGCCTTGCCCCAGGTAAACACAGCATGCCTGTCACTATACATTATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440496.5 |
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| CDS CCA 72 bp | TCAGGAGCCACACAGCCTGTGTTCACATCTAAGCCTTaGCACTTGCTAACTCTGTCTTCACTGTACCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: SGATQPVFTSKP*HLLTLSSLYLS Trigger: ACTGAGGTACAGTGAAGACAGAGTTAGCAAGTGCCAAGGCTTAGATGTGAACACAGGCTGTGTGGCTCCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663114.1 ENST00000666631.1 |
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| CDS GCA 72 bp | GAAGTTAATGTCTGTCCTCCCTGTGTTTACCCTCCTTaGATTTCCAGCAAGGAACCAGGCTTGGTGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: EVNVCPPCVYPP*ISSKEPGLVFL Trigger: AAGGAACACCAAGCCTGGTTCCTTGCTGGAAATGCAAGGAGGGTAAACACAGGGAGGACAGACATTAACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS CCA 72 bp | AAGATCTCAGGGACAGAGAGCAATGTGATTCCCATCTaGAAAACCACTCTGAGTTCCTCTCTCTCCTTCACG | + |
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Preference number: 6 (lower is better) Translates to: KISGTESNVIPI*KTTLSSSLSFT Trigger: CGTGAAGGAGAGAGAGGAACTCAGAGTGGTTTTCCAGATGGGAATCACATTGCTCTCTGTCCCTGAGATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000435966.1 ENST00000658813.1 |
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| CDS CAA 72 bp | AAGGATCTGAGCACTGCTCCATATCAACCCTTGGGTTaGATCCAACCCCAAGGTCCATTGAAATTGGGCATC | + |
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Preference number: 6 (lower is better) Translates to: KDLSTAPYQPLG*IQPQGPLKLGI Trigger: GATGCCCAATTTCAATGGACCTTGGGGTTGGATCAAACCCAAGGGTTGATATGGAGCAGTGCTCAGATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS TCA 72 bp | TCATCATTTGAGAGGCAGCAGCACACACTGGATAGATaGATTTACTCAGGAGCCACACAGCCTGTGTTCACA | + |
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Preference number: 6 (lower is better) Translates to: SSFERQQHTLDR*IYSGATQPVFT Trigger: TGTGAACACAGGCTGTGTGGCTCCTGAGTAAATTCATCTATCCAGTGTGTGCTGCTGCCTCTCAAATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000663114.1 ENST00000666631.1 |
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| CDS CAA 72 bp | TTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGCGATGCCTCAGGGATCTA | + |
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Preference number: 6 (lower is better) Translates to: LHCWWDCKLVQP*WKSVWRCLRDL Trigger: TAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CAA 72 bp | AGGAGTAAGGATCTGAGCACTGCTCCATATCAACCCTaGGGTTTGATCCAACCCCAAGGTCCATTGAAATTG | + |
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Preference number: 6 (lower is better) Translates to: RSKDLSTAPYQP*GLIQPQGPLKL Trigger: CAATTTCAATGGACCTTGGGGTTGGATCAAACCCAAGGGTTGATATGGAGCAGTGCTCAGATCCTTACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS CAA 90 bp | AGTGTTTGCTTCATCCTGCATGAAAATTTAAACTTAAGGAAAGGATaGGGCTGCTTGTATCTGGCAGGGAGGGGAAGGGTTCTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SVCFILHENLNLRKG*GCLYLAGRGRVLRT Trigger: TGTCCTCAGAACCCTTCCCCTCCCTGCCAGATACAAGCAGCCCAATCCTTTCCTTAAGTTTAAATTTTCATGCAGGATGAAGCAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS CAA 90 bp | GGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATaGTGGAAGTCAGTGTGGCGATGCCTCAGGGATCTAGAACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: GTLLHCWWDCKLVQP*WKSVWRCLRDLELE Trigger: TTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS TCA 72 bp | CTTGGTGATGATGATGATGGTGGTGATGGTGATGGTTaGAATGAAATCCTCTCTCTGGGCACAGGAGACTTT | + |
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Preference number: 6 (lower is better) Translates to: LGDDDDGGDGDG*NEILSLGTGDF Trigger: AAAGTCTCCTGTGCCCAGAGAGAGGATTTCATTTCAACCATCACCATCACCACCATCATCATCATCACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000420471.5 ENST00000435966.1 ENST00000656628.1 ENST00000663114.1 |
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| CDS TCA 72 bp | GCGATGCCTCAGGGATCTAGAACTAGAAATACCATTTaGCCCAGCCATCCCATTACTGGGTATATACCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AMPQGSRTRNTI*PSHPITGYIPK Trigger: TTTGGGTATATACCCAGTAATGGGATGGCTGGGTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGCATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CCA 72 bp | GATTTTTCTCATCATTTGAGAGGCAGCAGCACACACTaGATAGATGAATTTACTCAGGAGCCACACAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: DFSHHLRGSSTH*IDEFTQEPHSL Trigger: CAGGCTGTGTGGCTCCTGAGTAAATTCATCTATCCAGTGTGTGCTGCTGCCTCTCAAATGATGAGAAAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000663114.1 ENST00000666631.1 |
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| CDS CAA 72 bp | CATGAAAATTTAAACTTAAGGAAAGGATTGGGCTGCTaGTATCTGGCAGGGAGGGGAAGGGTTCTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: HENLNLRKGLGC*YLAGRGRVLRT Trigger: TGTCCTCAGAACCCTTCCCCTCCCTGCCAGATACAAGCAGCCCAATCCTTTCCTTAAGTTTAAATTTTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS CAA 90 bp | TCCCCTTTTACAGATGAGCAAGGGCAAAGTAGAATGGCAAAGGATTaGATTACCACAGAAACTGAGAGAGCCAGAGATAGTAGCTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: SPFTDEQGQSRMAKD*ITTETERARDSSWQ Trigger: TTGCCAGCTACTATCTCTGGCTCTCTCAGTTTCTGTGGTAATCAAATCCTTTGCCATTCTACTTTGCCCTTGCTCATCTGTAAAAGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS CCA 72 bp | GACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTaGCGATGCCTCAGGGATCTAGAACTAGAAATACCA | + |
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Preference number: 6 (lower is better) Translates to: DCKLVQPLWKSV*RCLRDLELEIP Trigger: TGGTATTTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTTACAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CAA 72 bp | TTCATCCTGCATGAAAATTTAAACTTAAGGAAAGGATaGGGCTGCTTGTATCTGGCAGGGAGGGGAAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: FILHENLNLRKG*GCLYLAGRGRV Trigger: AACCCTTCCCCTCCCTGCCAGATACAAGCAGCCCAATCCTTTCCTTAAGTTTAAATTTTCATGCAGGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS GCA 72 bp | CAGGGCTGGATGCAGAAGCTGTCTGAAGCCAGTGTTTaGTTCATCCTGCATGAAAATTTAAACTTAAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: QGWMQKLSEASV*FILHENLNLRK Trigger: TTTCCTTAAGTTTAAATTTTCATGCAGGATGAAGCAAACACTGGCTTCAGACAGCTTCTGCATCCAGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658880.1 |
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| CDS GCA 72 bp | AAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATaGCTCAGGGATCTAGAACTAGAAATACCATTTGAC | + |
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Preference number: 6 (lower is better) Translates to: KLVQPLWKSVWR*LRDLELEIPFD Trigger: GTCAAATGGTATTTCTAGTTCTAGATCCCTGAGGCATCGCCACACTGACTTCCACAATGGTTGAACTAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS TCA 72 bp | GGGAGGTTTATGACAGGGTTGGGAGCCAAAGATGTCTaGATCCAGTTTCTTCCATTCTTTAGGAAACTTAAA | + |
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Preference number: 6 (lower is better) Translates to: GRFMTGLGAKDV*IQFLPFFRKLK Trigger: TTTAAGTTTCCTAAAGAATGGAAGAAACTGGATTCAGACATCTTTGGCTCCCAACCCTGTCATAAACCTCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS GCA 72 bp | AGTTCCTCAAACAGATGTATGTACTCCCATGTTCACTaGAGCATTATTCACAATAGCCAGGGTATGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: SSSNRCMYSHVH*SIIHNSQGMES Trigger: TGATTCCATACCCTGGCTATTGTGAATAATGCTGCAGTGAACATGGGAGTACATACATCTGTTTGAGGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000420471.5 ENST00000440496.5 ENST00000656628.1 ENST00000661018.1 ENST00000663114.1 ENST00000664568.1 ENST00000668536.1 |
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| CDS GCA 72 bp | TCTTTAGGAAACTTAAACTTAAGGGAAAGATTGGACTaGTTGTTATCTGGTAGGAAAGGGAAGGCCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLGNLNLRERLD*LLSGRKGKASE Trigger: CTCAGAGGCCTTCCCTTTCCTACCAGATAACAAGCAGTCCAATCTTTCCCTTAAGTTTAAGTTTCCTAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS CCA 72 bp | CATGATAATTCCATACATGGCCTAGGGAGGACAAATTaGTACAACCTCTTTGCAGAGACATTTGGCAACATT | + |
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Preference number: 6 (lower is better) Translates to: HDNSIHGLGRTN*YNLFAETFGNI Trigger: AATGTTGCCAAATGTCTCTGCAAAGAGGTTGTACCAATTTGTCCTCCCTAGGCCATGTATGGAATTATCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000661018.1 ENST00000670178.1 |
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| CDS CAA 90 bp | TTCCATTCTTTAGGAAACTTAAACTTAAGGGAAAGATTGGACTGCTaGTTATCTGGTAGGAAAGGGAAGGCCTCTGAGGACATAGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: FHSLGNLNLRERLDC*LSGRKGKASEDIEK Trigger: TTTCTCTATGTCCTCAGAGGCCTTCCCTTTCCTACCAGATAACAAGCAGTCCAATCTTTCCCTTAAGTTTAAGTTTCCTAAAGAATGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670178.1 |
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| CDS GCA 72 bp | TCAATCTCAAACAGATGTATGTACTCCCATGTTCACTaGAGCATTATTCACAATAGCCAGGGTATGGAATCA | + |
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Preference number: 6 (lower is better) Translates to: SISNRCMYSHVH*SIIHNSQGMES Trigger: TGATTCCATACCCTGGCTATTGTGAATAATGCTGCAGTGAACATGGGAGTACATACATCTGTTTGAGATTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000431616.5 |
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| CDS CAA 72 bp | GAAACTGCTTTTCCAGTATCAATTCAACAACATCTCTaGGTGATGATGATGATGGTGGTGATGGTGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: ETAFPVSIQQHL*VMMMMVVMVMV Trigger: AACCATCACCATCACCACCATCATCATCATCACCAAGAGATGTTGTTGAATTGATACTGGAAAAGCAGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000420471.5 ENST00000435966.1 ENST00000656628.1 ENST00000663114.1 |
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| CDS CAA 72 bp | TTAAACATGAAGTTCCCTCCTCAAGTGAACAACTCATaGCTTTACGATAAAGTAAGGCATCTCTTAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: LNMKFPPQVNNS*LYDKVRHLLDG Trigger: CCCATCTAAGAGATGCCTTACTTTATCGTAAAGCAATGAGTTGTTCACTTGAGGAGGGAACTTCATGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440496.5 |
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| CDS GCA 72 bp | AGAAAAATGACTTTAGCAACTTATTTAGAGAGGCTATaGTCAGGTTCCCGCATCCATAAAAATTGGTATAAT | + |
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Preference number: 6 (lower is better) Translates to: RKMTLATYLERL*SGSRIHKNWYN Trigger: ATTATACCAATTTTTATGGATGCGGGAACCTGAGCATAGCCTCTCTAAATAAGTTGCTAAAGTCATTTTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000656628.1 ENST00000658813.1 |
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