Pregenerated sensors for LINC00626 (Homo sapiens)
Ensembl gene IDs: ENSG00000225826Ensembl transcript IDs: ENST00000420691.1, ENST00000663134.1, ENST00000665467.1, ENST00000667346.1, ENST00000669234.1, ENST00000670921.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCCCCGCCCTGCTTTTCCTAGAATGCTGGCATCTTCTCTTAGGGTaGCTCTTCTCAGGGTACCAAGATGGCTGCCGTAGCCTAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IPALLFLECWHLLLG*LFSGYQDGCRSLSI Trigger: GATGCTTAGGCTACGGCAGCCATCTTGGTACCCTGAGAAGAGTCACCCTAAGAGAAGATGCCAGCATTCTAGGAAAAGCAGGGCGGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CCA 90 bp | ATGCCCTTTCTTAAATTAATCCCTGGAAAGATGAATTACCCCAGTTaGTGTGCCAATCACGTTCACTTCCTGGGAGAGGGGTTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MPFLKLIPGKMNYPS*CANHVHFLGEGFSL Trigger: AAGAGAGAACCCCTCTCCCAGGAAGTGAACGTGATTGGCACACCAACTGGGGTAATTCATCTTTCCAGGGATTAATTTAAGAAAGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667346.1 |
||
| CDS TCA 90 bp | TCAGCAAAGTATTCTTCATGCCAGTTGGTTGCTGCGGAAATACTCTaGGAAATTCTCCACATGCCTGTGTTACTCCTGCAAGAGAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SAKYSSCQLVAAEIL*EILHMPVLLLQERF Trigger: GAATCTCTCTTGCAGGAGTAACACAGGCATGTGGAGAATTTCTCAGAGTATTTCCGCAGCAACCAACTGGCATGAAGAATACTTTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000669234.1 |
||
| CDS CCA 90 bp | CTGCTTTTGAACCCCATGTTTCAGCAAAGTATTCTTCATGCCAGTTaGTTGCTGCGGAAATACTCTGAGAAATTCTCCACATGCCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLNPMFQQSILHAS*LLRKYSEKFSTCLC Trigger: ACACAGGCATGTGGAGAATTTCTCAGAGTATTTCCGCAGCAACCAACTGGCATGAAGAATACTTTGCTGAAACATGGGGTTCAAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS GCA 90 bp | CAAACCAGGGAGGGGTTAGTGCTCTTAAGTGACCAATGGCTGACTTaGTGGATTCAAACAGGGAAAAATGATGTTGAGAATTCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QTREGLVLLSDQWLT*WIQTGKNDVENSVV Trigger: TACAACAGAATTCTCAACATCATTTTTCCCTGTTTGAATCCAGCAAGTCAGCCATTGGTCACTTAAGAGCACTAACCCCTCCCTGGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CCA 90 bp | ACCAGGGAGGGGTTAGTGCTCTTAAGTGACCAATGGCTGACTTGCTaGATTCAAACAGGGAAAAATGATGTTGAGAATTCTGTTGTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TREGLVLLSDQWLTC*IQTGKNDVENSVVS Trigger: ACTTACAACAGAATTCTCAACATCATTTTTCCCTGTTTGAATCCAGCAAGTCAGCCATTGGTCACTTAAGAGCACTAACCCCTCCCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CCA 90 bp | GAACATCTTCAAACCAGGGAGGGGTTAGTGCTCTTAAGTGACCAATaGCTGACTTGCTGGATTCAAACAGGGAAAAATGATGTTGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EHLQTREGLVLLSDQ*LTCWIQTGKNDVEN Trigger: ATTCTCAACATCATTTTTCCCTGTTTGAATCCAGCAAGTCAGCCATTGGTCACTTAAGAGCACTAACCCCTCCCTGGTTTGAAGATGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS TCA 90 bp | TGGTCCTTCTCTCTGTGCTTTGGACCCTTCTGCTTTATCTTCTTGTaGACAATTTCGCCTTCCTTCTCTTACATATTTAGACCCTACATC | + |
|
Preference number: 5 (lower is better) Translates to: WSFSLCFGPFCFIFL*TISPSFSYIFRPYI Trigger: GATGTAGGGTCTAAATATGTAAGAGAAGGAAGGCGAAATTGTTCACAAGAAGATAAAGCAGAAGGGTCCAAAGCACAGAGAGAAGGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665467.1 |
||
| CDS TCA 90 bp | TCAGCAAAGTATTCTTCATGCCAGTTGGTTGCTGCGGAAATACTCTaGGAAATTCTCCACATGCCTGTGTTACTCCTTATAAAGAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAKYSSCQLVAAEIL*EILHMPVLLLIKRN Trigger: ATTTCTCTTTATAAGGAGTAACACAGGCATGTGGAGAATTTCTCAGAGTATTTCCGCAGCAACCAACTGGCATGAAGAATACTTTGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000667346.1 ENST00000670921.1 |
||
| CDS CAA 72 bp | TTCTTCAGGAGTTTTTATCTTCCCCTCCTGGTAGAGTaGGGCCCTTTCGCTCTGCGTTCCCATCATTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FFRSFYLPLLVE*GPFALRSHHSV Trigger: CACAGAATGATGGGAACGCAGAGCGAAAGGGCCCAACTCTACCAGGAGGGGAAGATAAAAACTCCTGAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS GCA 72 bp | ATTAATCCCTGGAAAGATGAATTACCCCAGTTGGTGTaGCAATCACGTTCACTTCCTGGGAGAGGGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: INPWKDELPQLV*QSRSLPGRGVL Trigger: GAGAACCCCTCTCCCAGGAAGTGAACGTGATTGGCACACCAACTGGGGTAATTCATCTTTCCAGGGATTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667346.1 |
||
| CDS CAA 72 bp | CTTAGCCCACAACACACTGGGAACAAGAACGGTCACTaGGTCCATGTCGGGTCAACCAGTCATTCTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LSPQHTGNKNGH*VHVGSTSHSFL Trigger: TAAGAAAGAATGACTGGTTGACCCGACATGGACCAAGTGACCGTTCTTGTTCCCAGTGTGTTGTGGGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CAA 90 bp | ACTGGGTGTGACTTCAGAGGTCTGAAAGAGAGCTGTGGGCTGCTTTaGAACCCCATGTTTCAGCAAAGTATTCTTCATGCCAGTTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TGCDFRGLKESCGLL*NPMFQQSILHASWL Trigger: CAACCAACTGGCATGAAGAATACTTTGCTGAAACATGGGGTTCAAAAGCAGCCCACAGCTCTCTTTCAGACCTCTGAAGTCACACCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CAA 90 bp | TTGTATAATTTCTTCAGGAGTTTTTATCTTCCCCTCCTGGTAGAGTaGGGCCCTTTCGCTCTGCGTTCCCATCATTCTGTGCCCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LYNFFRSFYLPLLVE*GPFALRSHHSVPIS Trigger: AGAGATGGGCACAGAATGATGGGAACGCAGAGCGAAAGGGCCCAACTCTACCAGGAGGGGAAGATAAAAACTCCTGAAGAAATTATACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS TCA 72 bp | ACATCTTCAAACCAGGGAGGGGTTAGTGCTCTTAAGTaGCCAATGGCTGACTTGCTGGATTCAAACAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSSNQGGVSALK*PMADLLDSNRE Trigger: TTCCCTGTTTGAATCCAGCAAGTCAGCCATTGGTCACTTAAGAGCACTAACCCCTCCCTGGTTTGAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CCA 72 bp | TTAGCCCACAACACACTGGGAACAAGAACGGTCACTTaGTCCATGTCGGGTCAACCAGTCATTCTTTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: LAHNTLGTRTVT*SMSGQPVILSY Trigger: ATAAGAAAGAATGACTGGTTGACCCGACATGGACCAAGTGACCGTTCTTGTTCCCAGTGTGTTGTGGGCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CCA 72 bp | CTTAAATTAATCCCTGGAAAGATGAATTACCCCAGTTaGTGTGCCAATCACGTTCACTTCCTGGGAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LKLIPGKMNYPS*CANHVHFLGEG Trigger: CCCCTCTCCCAGGAAGTGAACGTGATTGGCACACCAACTGGGGTAATTCATCTTTCCAGGGATTAATTTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667346.1 |
||
| CDS CAA 72 bp | GACTTCAGAGGTCTGAAAGAGAGCTGTGGGCTGCTTTaGAACCCCATGTTTCAGCAAAGTATTCTTCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DFRGLKESCGLL*NPMFQQSILHA Trigger: GGCATGAAGAATACTTTGCTGAAACATGGGGTTCAAAAGCAGCCCACAGCTCTCTTTCAGACCTCTGAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CAA 90 bp | AAGAAGTTGTCCATCCTGTCTGCCATTGGTCCTTCTCTCTGTGCTTaGGACCCTTCTGCTTTATCTTCTTGTGAACAATTTCGCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KKLSILSAIGPSLCA*DPSALSSCEQFRLP Trigger: AGGAAGGCGAAATTGTTCACAAGAAGATAAAGCAGAAGGGTCCAAAGCACAGAGAGAAGGACCAATGGCAGACAGGATGGACAACTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665467.1 |
||
| CDS CCA 72 bp | CAAACCAGGGAGGGGTTAGTGCTCTTAAGTGACCAATaGCTGACTTGCTGGATTCAAACAGGGAAAAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: QTREGLVLLSDQ*LTCWIQTGKND Trigger: ATCATTTTTCCCTGTTTGAATCCAGCAAGTCAGCCATTGGTCACTTAAGAGCACTAACCCCTCCCTGGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CAA 90 bp | CTTTTGAACCCCATGTTTCAGCAAAGTATTCTTCATGCCAGTTGGTaGCTGCGGAAATACTCTGAGAAATTCTCCACATGCCTGTGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LLNPMFQQSILHASW*LRKYSEKFSTCLCY Trigger: GTAACACAGGCATGTGGAGAATTTCTCAGAGTATTTCCGCAGCAACCAACTGGCATGAAGAATACTTTGCTGAAACATGGGGTTCAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||
| CDS CAA 90 bp | CCTAAGCATCACATGCTCATGGTAAATTCTCTCAGGAGGTTATGCTaGCTTAAGTGTTCCAAGTCTTCCTCGTTTGTCAGAGATTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: PKHHMLMVNSLRRLC*LKCSKSSSFVRDSM Trigger: CATGGAATCTCTGACAAACGAGGAAGACTTGGAACACTTAAGCAAGCATAACCTCCTGAGAGAATTTACCATGAGCATGTGATGCTTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663134.1 |
||
| CDS GCA 72 bp | CATCACATGCTCATGGTAAATTCTCTCAGGAGGTTATaGTTGCTTAAGTGTTCCAAGTCTTCCTCGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HHMLMVNSLRRL*LLKCSKSSSFV Trigger: GACAAACGAGGAAGACTTGGAACACTTAAGCAAGCATAACCTCCTGAGAGAATTTACCATGAGCATGTGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663134.1 |
||
| CDS CAA 72 bp | TCCAAGTCTTCCTCGTTTGTCAGAGATTCCATGTCCTaGCTCAATATGAAAGTGAGACAACTATTCAGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKSSSFVRDSMS*LNMKVRQLFRL Trigger: GAGCCTGAATAGTTGTCTCACTTTCATATTGAGCAAGGACATGGAATCTCTGACAAACGAGGAAGACTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663134.1 |
||
| CDS GCA 72 bp | TTCCTGGGAGAGGGGTTCTCTCTTAAAGCACATAATTaGCTGTTACCTGAAGCTAATAGAATCTGCTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLGEGFSLKAHN*LLPEANRICYK Trigger: TTTGTAGCAGATTCTATTAGCTTCAGGTAACAGGCAATTATGTGCTTTAAGAGAGAACCCCTCTCCCAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667346.1 |
||
| CDS CCA 72 bp | TACCTCCTTTCAAGCAGACTTCCCCTCATGTCTCTTTaGTTAAAGCAGTCTTACATGCCCTTTCTTAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: YLLSSRLPLMSL*LKQSYMPFLKL Trigger: TAATTTAAGAAAGGGCATGTAAGACTGCTTTAACCAAAGAGACATGAGGGGAAGTCTGCTTGAAAGGAGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667346.1 |
||
| CDS TCA 72 bp | TCTCTGTGCTTTGGACCCTTCTGCTTTATCTTCTTGTaGACAATTTCGCCTTCCTTCTCTTACATATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLCFGPFCFIFL*TISPSFSYIFR Trigger: TCTAAATATGTAAGAGAAGGAAGGCGAAATTGTTCACAAGAAGATAAAGCAGAAGGGTCCAAAGCACAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665467.1 |
||
| CDS CAA 72 bp | TTCTTGTGGAGGAGTCTAAGCTGGAATATCAGATGTTaGTATTTAAAGTCAAGAACATCTTCAAACCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLWRSLSWNIRC*YLKSRTSSNQG Trigger: TCCCTGGTTTGAAGATGTTCTTGACTTTAAATACAAACATCTGATATTCCAGCTTAGACTCCTCCACAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000420691.1 ENST00000663134.1 ENST00000665467.1 ENST00000667346.1 ENST00000669234.1 ENST00000670921.1 |
||