Pregenerated sensors for LINC00608 (Homo sapiens)
Ensembl gene IDs: ENSG00000236445Ensembl transcript IDs: ENST00000419101.3, ENST00000432733.1, ENST00000598002.1, ENST00000600415.1, ENST00000626251.1, ENST00000627043.2, ENST00000628185.1, ENST00000654913.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCTCCCCGGATGGGAGAGTGGGCTGGTGCATTCATCAAGCAGGTaGGCCAGTCTGGCCTGGTGGGGGTCCTCTGTGATTTGCATGGTG | + |
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Preference number: 5 (lower is better) Translates to: GLPGWESGLVHSSSR*ASLAWWGSSVICMV Trigger: CACCATGCAAATCACAGAGGACCCCCACCAGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS GCA 90 bp | CATCATTATGCCCGACAGGCCTCCCCGGATGGGAGAGTGGGCTGGTaGATTCATCAAGCAGGTGAGCCAGTCTGGCCTGGTGGGGGTCCT | + |
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Preference number: 5 (lower is better) Translates to: HHYARQASPDGRVGW*IHQAGEPVWPGGGP Trigger: AGGACCCCCACCAGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCCTGTCGGGCATAATGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 90 bp | CCACATCATTATGCCCGACAGGCCTCCCCGGATGGGAGAGTGGGCTaGTGCATTCATCAAGCAGGTGAGCCAGTCTGGCCTGGTGGGGGT | + |
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Preference number: 5 (lower is better) Translates to: PHHYARQASPDGRVG*CIHQAGEPVWPGGG Trigger: ACCCCCACCAGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCCTGTCGGGCATAATGATGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 90 bp | ATGTTCCACATCATTATGCCCGACAGGCCTCCCCGGATGGGAGAGTaGGCTGGTGCATTCATCAAGCAGGTGAGCCAGTCTGGCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: MFHIIMPDRPPRMGE*AGAFIKQVSQSGLV Trigger: CACCAGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCCTGTCGGGCATAATGATGTGGAACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 90 bp | AGCTTCCTGATGATCCAGGCCTGTCCTCATGGACCCTTAACCCCTTaGTCCTTGGCTCTCCAAGGTATCGATCCCACCATTGCTTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SFLMIQACPHGPLTP*SLALQGIDPTIAFL Trigger: GAGGAAAGCAATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCATCAGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CCA 90 bp | CAGTCTTACCACACTCAGCTTCCTGATGATCCAGGCCTGTCCTCATaGACCCTTAACCCCTTGGTCCTTGGCTCTCCAAGGTATCGATCC | + |
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Preference number: 5 (lower is better) Translates to: QSYHTQLPDDPGLSS*TLNPLVLGSPRYRS Trigger: GGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCATCAGGAAGCTGAGTGTGGTAAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS CCA 90 bp | AGGTTCTCTCACACTCAGCTTCCTGATGATCCAGGCCTGTCCTCATaGACCCTTAACCCCTTGGTCCTTGGCTCTCCAAGGTATCGATCC | + |
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Preference number: 5 (lower is better) Translates to: RFSHTQLPDDPGLSS*TLNPLVLGSPRYRS Trigger: GGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCATCAGGAAGCTGAGTGTGAGAGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627043.2 |
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| CDS TCA 90 bp | CCTGAGTTACTGTGGTCTTGGCAGGACTGTACTCCACCCAATCCCTaGAGAAGCCACAGTCTTACCACACTCAGCTTCCTGATGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: PELLWSWQDCTPPNP*RSHSLTTLSFLMIQ Trigger: CTGGATCATCAGGAAGCTGAGTGTGGTAAGACTGTGGCTTCTTCAGGGATTGGGTGGAGTACAGTCCTGCCAAGACCACAGTAACTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS CCA 90 bp | AGCCCTGCTAACATGCAGCTTGAGGACATTCATGTCCATACTGTTTaGGACCTGCACAGTCACAGTGCAATGATGCCACTGAAGGCACTG | + |
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Preference number: 5 (lower is better) Translates to: SPANMQLEDIHVHTV*DLHSHSAMMPLKAL Trigger: CAGTGCCTTCAGTGGCATCATTGCACTGTGACTGTGCAGGTCCCAAACAGTATGGACATGAATGTCCTCAAGCTGCATGTTAGCAGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000598002.1 |
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| CDS GCA 90 bp | GAGATCGCACCACTGCACTCCAGCCTTGATCTAATGAAAAGCCTCTaGCATGGAACATGTTGGGTGAGTTCTCTGTCACCAGAGTGTTCA | + |
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Preference number: 5 (lower is better) Translates to: EIAPLHSSLDLMKSL*HGTCWVSSLSPECS Trigger: TGAACACTCTGGTGACAGAGAACTCACCCAACATGTTCCATGGCAGAGGCTTTTCATTAGATCAAGGCTGGAGTGCAGTGGTGCGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626251.1 |
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| CDS CCA 90 bp | TCCAAGATGACCTACAGGTCGAACCCAATCTCAGAATGCAGTAGATaGGTATCCTCTTCTCCAGATTATCTCAGCTCTAGGAGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: SKMTYRSNPISECSR*VSSSPDYLSSRSPC Trigger: GCAGGGGCTCCTAGAGCTGAGATAATCTGGAGAAGAGGATACCCATCTACTGCATTCTGAGATTGGGTTCGACCTGTAGGTCATCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS TCA 90 bp | CTGCCAGACCTTTTCCCACTGCTCCAAGTGACCTTTCCACAGTCCTaGGCAGTCACTGATCACTTTGTTTTTAGGATCATTCCCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LPDLFPLLQVTFPQS*AVTDHFVFRIIPMQ Trigger: CTGCATGGGAATGATCCTAAAAACAAAGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGGTCTGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS GCA 90 bp | TCCACACACTATCACTTGCAGATGGAATTAGAAGCCCTGCTAACATaGAGCTTGAGGACATTCATGTCCATACTGTTTGGGACCTGCACA | + |
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Preference number: 5 (lower is better) Translates to: STHYHLQMELEALLT*SLRTFMSILFGTCT Trigger: TGTGCAGGTCCCAAACAGTATGGACATGAATGTCCTCAAGCTGCATGTTAGCAGGGCTTCTAATTCCATCTGCAAGTGATAGTGTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 90 bp | GGAAGACAGGGCAGGTATTGCTTTATCTTTTCCCACTGCTCCAAGTaGCCTTTCCACAGTCCTGAGCAGTCACTGATCACTTTGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: GRQGRYCFIFSHCSK*PFHSPEQSLITLFL Trigger: TAAAAACAAAGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGATAAAGCAATACCTGCCCTGTCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598002.1 |
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| CDS GCA 90 bp | AAACGTCTATCCAAGATGACCTACAGGTCGAACCCAATCTCAGAATaGAGTAGATGGGTATCCTCTTCTCCAGATTATCTCAGCTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: KRLSKMTYRSNPISE*SRWVSSSPDYLSSR Trigger: CCTAGAGCTGAGATAATCTGGAGAAGAGGATACCCATCTACTGCATTCTGAGATTGGGTTCGACCTGTAGGTCATCTTGGATAGACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS TCA 90 bp | TGTATCTTCTTATTCCTCTGCCAGACCTTTTCCCACTGCTCCAAGTaGCCTTTCCACAGTCCTGAGCAGTCACTGATCACTTTGTTTTTA | + |
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Preference number: 5 (lower is better) Translates to: CIFLFLCQTFSHCSK*PFHSPEQSLITLFL Trigger: TAAAAACAAAGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGGTCTGGCAGAGGAATAAGAAGATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 90 bp | AGAGACCAAGTGGAGGACACACAGTGTAGTAGTAGGCCCAGGAAGTaGAGAGGAAAAATGGTGGAAAGCCAACAACAATATGAGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: RDQVEDTQCSSRPRK*RGKMVESQQQYEMF Trigger: AAACATCTCATATTGTTGTTGGCTTTCCACCATTTTTCCTCTTCACTTCCTGGGCCTACTACTACACTGTGTGTCCTCCACTTGGTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000654913.1 |
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| CDS TCA 90 bp | TTGCTTTATCTTTTCCCACTGCTCCAAGTGACCTTTCCACAGTCCTaGGCAGTCACTGATCACTTTGTTTTTAGGATCATTCCCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLYLFPLLQVTFPQS*AVTDHFVFRIIPMQ Trigger: CTGCATGGGAATGATCCTAAAAACAAAGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGATAAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000598002.1 |
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| CDS TCA 90 bp | AATTCCTTAGGAAGAACTGTGAGGCCCTGTTCTTACATCTTTAAATaGAACAACAGAAGTCAGAGTCTTGGCAAAGATGGGGCTCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NSLGRTVRPCSYIFK*NNRSQSLGKDGAQQ Trigger: CTGCTGAGCCCCATCTTTGCCAAGACTCTGACTTCTGTTGTTTCATTTAAAGATGTAAGAACAGGGCCTCACAGTTCTTCCTAAGGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 72 bp | TATGCCCGACAGGCCTCCCCGGATGGGAGAGTGGGCTaGTGCATTCATCAAGCAGGTGAGCCAGTCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: YARQASPDGRVG*CIHQAGEPVWP Trigger: AGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCCTGTCGGGCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS TCA 72 bp | GGATGGGAGAGTGGGCTGGTGCATTCATCAAGCAGGTaGGCCAGTCTGGCCTGGTGGGGGTCCTCTGTGATT | + |
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Preference number: 6 (lower is better) Translates to: GWESGLVHSSSR*ASLAWWGSSVI Trigger: AATCACAGAGGACCCCCACCAGGCCAGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 72 bp | ATCATTATGCCCGACAGGCCTCCCCGGATGGGAGAGTaGGCTGGTGCATTCATCAAGCAGGTGAGCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: IIMPDRPPRMGE*AGAFIKQVSQS Trigger: AGACTGGCTCACCTGCTTGATGAATGCACCAGCCCACTCTCCCATCCGGGGAGGCCTGTCGGGCATAATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 72 bp | CACACTCAGCTTCCTGATGATCCAGGCCTGTCCTCATaGACCCTTAACCCCTTGGTCCTTGGCTCTCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: HTQLPDDPGLSS*TLNPLVLGSPR Trigger: CCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCATCAGGAAGCTGAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | TCTAGGAGCCCCTGCCTTTGTGATGTCTCCAAGCCCTaGGTTACTGTGGTCTTGGCAGGACTGTACTCCACC | + |
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Preference number: 6 (lower is better) Translates to: SRSPCLCDVSKP*VTVVLAGLYST Trigger: GGTGGAGTACAGTCCTGCCAAGACCACAGTAACTCAGGGCTTGGAGACATCACAAAGGCAGGGGCTCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS CCA 72 bp | CAAGCTTTCACTTTCCTAACTGAGGCGCTGCAGGCTTaGAGAAGATCACTGTACTCTGAGGTGGGGTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QAFTFLTEALQA*RRSLYSEVGWG Trigger: GCCCCACCCCACCTCAGAGTACAGTGATCTTCTCCAAGCCTGCAGCGCCTCAGTTAGGAAAGTGAAAGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS CAA 72 bp | CTTGGTCCTTGGCTCTCCAAGGTATCGATCCCACCATaGCTTTCCTCTGCCAATCCAGGGTCAAGCCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGPWLSKVSIPP*LSSANPGSSPS Trigger: AGAGGGGCTTGACCCTGGATTGGCAGAGGAAAGCAATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 72 bp | CAGGCCTGTCCTCATGGACCCTTAACCCCTTGGTCCTaGGCTCTCCAAGGTATCGATCCCACCATTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QACPHGPLTPWS*ALQGIDPTIAF Trigger: GAAAGCAATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 90 bp | CTGATGATCCAGGCCTGTCCTCATGGACCCTTAACCCCTTGGTCCTaGGCTCTCCAAGGTATCGATCCCACCATTGCTTTCCTCTGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LMIQACPHGPLTPWS*ALQGIDPTIAFLCQ Trigger: TTGGCAGAGGAAAGCAATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | CTGTGGTCTTGGCAGGACTGTACTCCACCCAATCCCTaGAGAAGCCACAGTCTTACCACACTCAGCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LWSWQDCTPPNP*RSHSLTTLSFL Trigger: CAGGAAGCTGAGTGTGGTAAGACTGTGGCTTCTTCAGGGATTGGGTGGAGTACAGTCCTGCCAAGACCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS GCA 72 bp | TTGGTCCTTGGCTCTCCAAGGTATCGATCCCACCATTaGTTTCCTCTGCCAATCCAGGGTCAAGCCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVLGSPRYRSHH*FPLPIQGQAPL Trigger: AAGAGGGGCTTGACCCTGGATTGGCAGAGGAAAGCAATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CCA 72 bp | ATGATCCAGGCCTGTCCTCATGGACCCTTAACCCCTTaGTCCTTGGCTCTCCAAGGTATCGATCCCACCATT | + |
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Preference number: 6 (lower is better) Translates to: MIQACPHGPLTP*SLALQGIDPTI Trigger: AATGGTGGGATCGATACCTTGGAGAGCCAAGGACCAAGGGGTTAAGGGTCCATGAGGACAGGCCTGGATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS GCA 72 bp | GCTCTCCAAGGTATCGATCCCACCATTGCTTTCCTCTaGCAATCCAGGGTCAAGCCCCTCTTGCATTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ALQGIDPTIAFL*QSRVKPLLHFL Trigger: CAGAAAATGCAAGAGGGGCTTGACCCTGGATTGGCAGAGGAAAGCAATGGTGGGATCGATACCTTGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS GCA 72 bp | GGGTGCAGCATCAGAGAGCCTCTTTACAGCCCTATTTaGAGGGGTCAGGAAACTGGGAGGAAGAAGAAACAC | + |
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Preference number: 6 (lower is better) Translates to: GCSIREPLYSPI*RGQETGRKKKH Trigger: GTGTTTCTTCTTCCTCCCAGTTTCCTGACCCCTGCAAATAGGGCTGTAAAGAGGCTCTCTGATGCTGCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS TCA 72 bp | GCCCCAATGCCTTTTGCAAGCTTTCACTTTCCTAACTaGGGCGCTGCAGGCTTGGAGAAGATCACTGTACTC | + |
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Preference number: 6 (lower is better) Translates to: APMPFASFHFPN*GAAGLEKITVL Trigger: GAGTACAGTGATCTTCTCCAAGCCTGCAGCGCCTCAGTTAGGAAAGTGAAAGCTTGCAAAAGGCATTGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS GCA 72 bp | TCATGTCCATACTGTTTGGGACCTGCACAGTCACAGTaGAATGATGCCACTGAAGGCACTGAGGCTCACAGA | + |
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Preference number: 6 (lower is better) Translates to: SCPYCLGPAQSQ*NDATEGTEAHR Trigger: TCTGTGAGCCTCAGTGCCTTCAGTGGCATCATTGCACTGTGACTGTGCAGGTCCCAAACAGTATGGACATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000598002.1 |
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| CDS TCA 72 bp | TTATTCCTCTGCCAGACCTTTTCCCACTGCTCCAAGTaGCCTTTCCACAGTCCTGAGCAGTCACTGATCACT | + |
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Preference number: 6 (lower is better) Translates to: LFLCQTFSHCSK*PFHSPEQSLIT Trigger: AGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGGTCTGGCAGAGGAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS GCA 72 bp | CCACTGCACTCCAGCCTTGATCTAATGAAAAGCCTCTaGCATGGAACATGTTGGGTGAGTTCTCTGTCACCA | + |
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Preference number: 6 (lower is better) Translates to: PLHSSLDLMKSL*HGTCWVSSLSP Trigger: TGGTGACAGAGAACTCACCCAACATGTTCCATGGCAGAGGCTTTTCATTAGATCAAGGCTGGAGTGCAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626251.1 |
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| CDS CCA 72 bp | CATTGTGCACAGTGTTGCTTTCAGGAAGAGACCAAGTaGAGGACACACAGTGTAGTAGTAGGCCCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: HCAQCCFQEETK*RTHSVVVGPGS Trigger: ACTTCCTGGGCCTACTACTACACTGTGTGTCCTCCACTTGGTCTCTTCCTGAAAGCAACACTGTGCACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000654913.1 |
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| CDS TCA 72 bp | GGCAGGTATTGCTTTATCTTTTCCCACTGCTCCAAGTaGCCTTTCCACAGTCCTGAGCAGTCACTGATCACT | + |
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Preference number: 6 (lower is better) Translates to: GRYCFIFSHCSK*PFHSPEQSLIT Trigger: AGTGATCAGTGACTGCTCAGGACTGTGGAAAGGTCACTTGGAGCAGTGGGAAAAGATAAAGCAATACCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000598002.1 |
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| CDS CCA 72 bp | AACATGCAGCTTGAGGACATTCATGTCCATACTGTTTaGGACCTGCACAGTCACAGTGCAATGATGCCACTG | + |
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Preference number: 6 (lower is better) Translates to: NMQLEDIHVHTV*DLHSHSAMMPL Trigger: CAGTGGCATCATTGCACTGTGACTGTGCAGGTCCCAAACAGTATGGACATGAATGTCCTCAAGCTGCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000598002.1 ENST00000654913.1 |
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| CDS CCA 72 bp | TCATTTATTCAAAGTGCTGTCCTGAGAGAGAGGACCTaGATGCCTGTGACTAAGGGCAGTATTGGGACACGT | + |
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Preference number: 6 (lower is better) Translates to: SFIQSAVLRERT*MPVTKGSIGTR Trigger: ACGTGTCCCAATACTGCCCTTAGTCACAGGCATCCAGGTCCTCTCTCTCAGGACAGCACTTTGAATAAATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 72 bp | ATGCGCTCTGTGCAACTAAGCTCCACACACTATCACTaGCAGATGGAATTAGAAGCCCTGCTAACATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: MRSVQLSSTHYH*QMELEALLTCS Trigger: GCTGCATGTTAGCAGGGCTTCTAATTCCATCTGCAAGTGATAGTGTGTGGAGCTTAGTTGCACAGAGCGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 90 bp | AACATGACCTGCTGCTTGCCCAGTACAGGTGCACACCGCCTACAATaGGTTATAAAGGACAAACTGACAGCTTGCCTTATGAGTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NMTCCLPSTGAHRLQ*VIKDKLTACLMSVL Trigger: AAGGACACTCATAAGGCAAGCTGTCAGTTTGTCCTTTATAACCAATTGTAGGCGGTGTGCACCTGTACTGGGCAAGCAGCAGGTCATGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS CAA 90 bp | TCCAGTAACATGCGCTCTGTGCAACTAAGCTCCACACACTATCACTaGCAGATGGAATTAGAAGCCCTGCTAACATGCAGCTTGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: SSNMRSVQLSSTHYH*QMELEALLTCSLRT Trigger: TGTCCTCAAGCTGCATGTTAGCAGGGCTTCTAATTCCATCTGCAAGTGATAGTGTGTGGAGCTTAGTTGCACAGAGCGCATGTTACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 90 bp | CCACTTGGTTTAATAAGTCTGCCCCCAGGAACATTGTGCACAGTGTaGCTTTCAGGAAGAGACCAAGTGGAGGACACACAGTGTAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: PLGLISLPPGTLCTV*LSGRDQVEDTQCSS Trigger: ACTACTACACTGTGTGTCCTCCACTTGGTCTCTTCCTGAAAGCAACACTGTGCACAATGTTCCTGGGGGCAGACTTATTAAACCAAGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000654913.1 |
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| CDS CCA 72 bp | ACCTACAGGTCGAACCCAATCTCAGAATGCAGTAGATaGGTATCCTCTTCTCCAGATTATCTCAGCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TYRSNPISECSR*VSSSPDYLSSR Trigger: CCTAGAGCTGAGATAATCTGGAGAAGAGGATACCCATCTACTGCATTCTGAGATTGGGTTCGACCTGTAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS CAA 72 bp | TTGCAGATGGAATTAGAAGCCCTGCTAACATGCAGCTaGAGGACATTCATGTCCATACTGTTTGGGACCTGC | + |
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Preference number: 6 (lower is better) Translates to: LQMELEALLTCS*RTFMSILFGTC Trigger: GCAGGTCCCAAACAGTATGGACATGAATGTCCTCAAGCTGCATGTTAGCAGGGCTTCTAATTCCATCTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 72 bp | TTTGACCCCTCCAAGGTTAGGAAGACAGGGCAGGTATaGCTTTATCTTTTCCCACTGCTCCAAGTGACCTTT | + |
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Preference number: 6 (lower is better) Translates to: FDPSKVRKTGQV*LYLFPLLQVTF Trigger: AAAGGTCACTTGGAGCAGTGGGAAAAGATAAAGCAATACCTGCCCTGTCTTCCTAACCTTGGAGGGGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000598002.1 |
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| CDS GCA 72 bp | TCATGTAAACATGACCTGCTGCTTGCCCAGTACAGGTaGACACCGCCTACAATTGGTTATAAAGGACAAACT | + |
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Preference number: 6 (lower is better) Translates to: SCKHDLLLAQYR*TPPTIGYKGQT Trigger: AGTTTGTCCTTTATAACCAATTGTAGGCGGTGTGCACCTGTACTGGGCAAGCAGCAGGTCATGTTTACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS GCA 72 bp | TCCAAGATGACCTACAGGTCGAACCCAATCTCAGAATaGAGTAGATGGGTATCCTCTTCTCCAGATTATCTC | + |
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Preference number: 6 (lower is better) Translates to: SKMTYRSNPISE*SRWVSSSPDYL Trigger: GAGATAATCTGGAGAAGAGGATACCCATCTACTGCATTCTGAGATTGGGTTCGACCTGTAGGTCATCTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419101.3 ENST00000654913.1 |
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| CDS TCA 72 bp | ACGTGGTTGGAAGCTCCAGTAAAACAGATGTCACCTTaGTCTAATGAAAAGCCTCTGCCATGGAACATGTTG | + |
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Preference number: 6 (lower is better) Translates to: TWLEAPVKQMSP*SNEKPLPWNML Trigger: CAACATGTTCCATGGCAGAGGCTTTTCATTAGATCAAGGTGACATCTGTTTTACTGGAGCTTCCAACCACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | GCCTGTAGGGTGAAGTGCAGAAAAATCATTGTGATTTaGGGATGCATTGATGGAGCTGTGACACCTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: ACRVKCRKIIVI*GCIDGAVTPKM Trigger: CATCTTAGGTGTCACAGCTCCATCAATGCATCCTCAAATCACAATGATTTTTCTGCACTTCACCCTACAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628185.1 |
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| CDS GCA 72 bp | TATCACTTGCAGATGGAATTAGAAGCCCTGCTAACATaGAGCTTGAGGACATTCATGTCCATACTGTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: YHLQMELEALLT*SLRTFMSILFG Trigger: CCCAAACAGTATGGACATGAATGTCCTCAAGCTGCATGTTAGCAGGGCTTCTAATTCCATCTGCAAGTGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS GCA 72 bp | CAGTCACTGATCACTTTGTTTTTAGGATCATTCCCATaGAGGATGACACAGACCCATATCTCCTCCAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: QSLITLFLGSFP*RMTQTHISSSN Trigger: GTTACTGGAGGAGATATGGGTCTGTGTCATCCTGCATGGGAATGATCCTAAAAACAAAGTGATCAGTGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000598002.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 72 bp | AACTGGGAACCAGAAATTCTGAGTTCCAGTTGCAGCTaGGCAACTAACTTGCTGTGTGACCTTCACATAATC | + |
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Preference number: 6 (lower is better) Translates to: NWEPEILSSSCS*ATNLLCDLHII Trigger: GATTATGTGAAGGTCACACAGCAAGTTAGTTGCCAAGCTGCAACTGGAACTCAGAATTTCTGGTTCCCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 90 bp | TCTGCTGGGAGGATAAATAAACGAAGGCCCCAGATGTTAAATGACTaGGTTGAAGTCCCAGGGCTTGTTCTAAGACCTGTATCTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: SAGRINKRRPQMLND*VEVPGLVLRPVSSY Trigger: ATAAGAAGATACAGGTCTTAGAACAAGCCCTGGGACTTCAACCAAGTCATTTAACATCTGGGGCCTTCGTTTATTTATCCTCCCAGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS CAA 90 bp | TGGGAACCAGAAATTCTGAGTTCCAGTTGCAGCTTGGCAACTAACTaGCTGTGTGACCTTCACATAATCACATCTCTTTTCTGGGATTTC | + |
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Preference number: 6 (lower is better) Translates to: WEPEILSSSCSLATN*LCDLHIITSLFWDF Trigger: GAAATCCCAGAAAAGAGATGTGATTATGTGAAGGTCACACAGCAAGTTAGTTGCCAAGCTGCAACTGGAACTCAGAATTTCTGGTTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | ACCTGTAGGGTGAAGTGCAGAAAAATCATTGTGATTTaGGGATGCATTGATGGAGCTGTGACACCTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: TCRVKCRKIIVI*GCIDGAVTPKM Trigger: CATCTTAGGTGTCACAGCTCCATCAATGCATCCTCAAATCACAATGATTTTTCTGCACTTCACCCTACAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS TCA 72 bp | GGAAGAACTGTGAGGCCCTGTTCTTACATCTTTAAATaGAACAACAGAAGTCAGAGTCTTGGCAAAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: GRTVRPCSYIFK*NNRSQSLGKDG Trigger: CCCATCTTTGCCAAGACTCTGACTTCTGTTGTTTCATTTAAAGATGTAAGAACAGGGCCTCACAGTTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CCA 72 bp | CACACTGAGAAGATACAGCCAGGATCCAGAAAGATCTaGGTTGCTAAAAATTATGGGCTGAATGTAGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: HTEKIQPGSRKI*VAKNYGLNVAK Trigger: CTTTGCTACATTCAGCCCATAATTTTTAGCAACCCAGATCTTTCTGGATCCTGGCTGTATCTTCTCAGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000432733.1 |
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| CDS CAA 72 bp | AGGATAAATAAACGAAGGCCCCAGATGTTAAATGACTaGGTTGAAGTCCCAGGGCTTGTTCTAAGACCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RINKRRPQMLND*VEVPGLVLRPV Trigger: TACAGGTCTTAGAACAAGCCCTGGGACTTCAACCAAGTCATTTAACATCTGGGGCCTTCGTTTATTTATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000419101.3 ENST00000432733.1 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | TTAGGAAGACAGGGCAGGTATTGCTTTATCTGCTTATaGGTGTCCTTGGTTAGGTCTCTGTTTGATAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGRQGRYCFICL*VSLVRSLFDKE Trigger: TTCCTTATCAAACAGAGACCTAACCAAGGACACTCATAAGCAGATAAAGCAATACCTGCCCTGTCTTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000600415.1 |
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| CDS CAA 72 bp | GAAATTCTGAGTTCCAGTTGCAGCTTGGCAACTAACTaGCTGTGTGACCTTCACATAATCACATCTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: EILSSSCSLATN*LCDLHIITSLF Trigger: GAAAAGAGATGTGATTATGTGAAGGTCACACAGCAAGTTAGTTGCCAAGCTGCAACTGGAACTCAGAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419101.3 ENST00000627043.2 ENST00000654913.1 |
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| CDS TCA 72 bp | CATAGAAAATTTGGAAACACACACCTAAGGCCTCCATaGACTATTGGTTGGATGAAGCGTGTAAAAACGCAT | + |
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Preference number: 6 (lower is better) Translates to: HRKFGNTHLRPP*TIGWMKRVKTH Trigger: ATGCGTTTTTACACGCTTCATCCAACCAATAGTTCATGGAGGCCTTAGGTGTGTGTTTCCAAATTTTCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000432733.1 ENST00000626251.1 ENST00000628185.1 |
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| CDS CAA 90 bp | CAAACTGACAGCTTGCCTTATGAGTGTCCTTGGTTAGGTCTCTGTTaGATAAGGAAGTACATTTTGTCCCTGATAAGAAATAGAGACTAT | + |
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Preference number: 6 (lower is better) Translates to: QTDSLPYECPWLGLC*IRKYILSLIRNRDY Trigger: ATAGTCTCTATTTCTTATCAGGGACAAAATGTACTTCCTTATCAAACAGAGACCTAACCAAGGACACTCATAAGGCAAGCTGTCAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS CAA 72 bp | AGCTTGCCTTATGAGTGTCCTTGGTTAGGTCTCTGTTaGATAAGGAAGTACATTTTGTCCCTGATAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: SLPYECPWLGLC*IRKYILSLIRN Trigger: ATTTCTTATCAGGGACAAAATGTACTTCCTTATCAAACAGAGACCTAACCAAGGACACTCATAAGGCAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419101.3 |
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| CDS CAA 90 bp | GGTATTGCTTTATCTGCTTATGAGTGTCCTTGGTTAGGTCTCTGTTaGATAAGGAAGTACATTTTGTCCCTGATAAGAAATAGAGACTAT | + |
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Preference number: 6 (lower is better) Translates to: GIALSAYECPWLGLC*IRKYILSLIRNRDY Trigger: ATAGTCTCTATTTCTTATCAGGGACAAAATGTACTTCCTTATCAAACAGAGACCTAACCAAGGACACTCATAAGCAGATAAAGCAATACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600415.1 |
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| CDS CAA 72 bp | TTATCTGCTTATGAGTGTCCTTGGTTAGGTCTCTGTTaGATAAGGAAGTACATTTTGTCCCTGATAAGAAAT | + |
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Preference number: 6 (lower is better) Translates to: LSAYECPWLGLC*IRKYILSLIRN Trigger: ATTTCTTATCAGGGACAAAATGTACTTCCTTATCAAACAGAGACCTAACCAAGGACACTCATAAGCAGATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000600415.1 |
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